BLASTX nr result
ID: Phellodendron21_contig00043801
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00043801
(287 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006466665.2 PREDICTED: pentatricopeptide repeat-containing pr... 135 7e-35
KDO79365.1 hypothetical protein CISIN_1g038516mg [Citrus sinensis] 132 6e-34
XP_008241570.1 PREDICTED: pentatricopeptide repeat-containing pr... 109 6e-26
XP_010088994.1 hypothetical protein L484_020277 [Morus notabilis... 105 1e-24
XP_018856713.1 PREDICTED: pentatricopeptide repeat-containing pr... 103 6e-24
XP_017969511.1 PREDICTED: pentatricopeptide repeat-containing pr... 103 9e-24
XP_016734761.1 PREDICTED: pentatricopeptide repeat-containing pr... 102 2e-23
XP_010547511.1 PREDICTED: pentatricopeptide repeat-containing pr... 101 4e-23
XP_017638075.1 PREDICTED: pentatricopeptide repeat-containing pr... 101 5e-23
XP_012436979.1 PREDICTED: pentatricopeptide repeat-containing pr... 101 6e-23
XP_017638074.1 PREDICTED: pentatricopeptide repeat-containing pr... 101 6e-23
XP_016720682.1 PREDICTED: pentatricopeptide repeat-containing pr... 100 8e-23
XP_008338210.1 PREDICTED: pentatricopeptide repeat-containing pr... 100 1e-22
XP_009376489.1 PREDICTED: pentatricopeptide repeat-containing pr... 100 2e-22
XP_004301858.1 PREDICTED: pentatricopeptide repeat-containing pr... 99 5e-22
GAV86957.1 PPR domain-containing protein/PPR_2 domain-containing... 96 4e-21
KRH28530.1 hypothetical protein GLYMA_11G059600 [Glycine max] 95 8e-21
NP_001327161.1 Pentatricopeptide repeat (PPR) superfamily protei... 95 1e-20
NP_190611.1 Pentatricopeptide repeat (PPR) superfamily protein [... 95 1e-20
XP_015065070.1 PREDICTED: pentatricopeptide repeat-containing pr... 94 2e-20
>XP_006466665.2 PREDICTED: pentatricopeptide repeat-containing protein At3g50420
[Citrus sinensis]
Length = 762
Score = 135 bits (339), Expect = 7e-35
Identities = 68/92 (73%), Positives = 77/92 (83%), Gaps = 2/92 (2%)
Frame = +1
Query: 10 EGTRVRYFMPPTHE--ASVIATLIQICSSITSLKRARQLHALILTSNTTPINVQSPYPYN 183
+ R FMPPTHE IATLIQIC+SITSLKRARQ+HAL+LT+N PIN QSPY YN
Sbjct: 47 QALRSLIFMPPTHENLCRNIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYN 106
Query: 184 NVLSMYKRCGSIREARKVFDEMPRRSLVSYNA 279
NVLSMY RCGSIR+AR+VFDE+P+RSLVSYNA
Sbjct: 107 NVLSMYGRCGSIRDARQVFDEIPKRSLVSYNA 138
>KDO79365.1 hypothetical protein CISIN_1g038516mg [Citrus sinensis]
Length = 708
Score = 132 bits (332), Expect = 6e-34
Identities = 66/84 (78%), Positives = 74/84 (88%), Gaps = 2/84 (2%)
Frame = +1
Query: 34 MPPTHE--ASVIATLIQICSSITSLKRARQLHALILTSNTTPINVQSPYPYNNVLSMYKR 207
MPPTHE IATLIQIC+SITSLKRARQ+HAL+LT+N PIN QSPY YNNVLSMY R
Sbjct: 1 MPPTHENLCRNIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGR 60
Query: 208 CGSIREARKVFDEMPRRSLVSYNA 279
CGSIR+AR+VFDE+P+RSLVSYNA
Sbjct: 61 CGSIRDARQVFDEIPKRSLVSYNA 84
>XP_008241570.1 PREDICTED: pentatricopeptide repeat-containing protein At3g50420
[Prunus mume]
Length = 706
Score = 109 bits (273), Expect = 6e-26
Identities = 53/82 (64%), Positives = 68/82 (82%)
Frame = +1
Query: 34 MPPTHEASVIATLIQICSSITSLKRARQLHALILTSNTTPINVQSPYPYNNVLSMYKRCG 213
MPP +E+S +A L+Q C+SITSLK+ARQLHAL LT TT I SPYPYNNV+SMY RCG
Sbjct: 1 MPPPYESSFLAALMQKCTSITSLKQARQLHALFLT--TTAIGSYSPYPYNNVISMYSRCG 58
Query: 214 SIREARKVFDEMPRRSLVSYNA 279
S+ +++KVFD+MP+R+ VS+NA
Sbjct: 59 SLADSQKVFDKMPQRNNVSFNA 80
>XP_010088994.1 hypothetical protein L484_020277 [Morus notabilis] EXB37221.1
hypothetical protein L484_020277 [Morus notabilis]
Length = 721
Score = 105 bits (263), Expect = 1e-24
Identities = 53/92 (57%), Positives = 70/92 (76%), Gaps = 3/92 (3%)
Frame = +1
Query: 13 GTRVRYFMPPTHEASVIATLIQICSSITSLKRARQLHALILTSNTTPINV---QSPYPYN 183
G + FMP +HEA+ +A L+Q C+S+TSL+ ARQLHAL+LTS+ V PY +N
Sbjct: 6 GVKRCVFMPTSHEAASLALLVQKCTSVTSLRLARQLHALLLTSSIAVAAVVPHSPPYTHN 65
Query: 184 NVLSMYKRCGSIREARKVFDEMPRRSLVSYNA 279
NVLSMY RCGS+ +ARKVFD+MP+R+LVS+NA
Sbjct: 66 NVLSMYARCGSLGDARKVFDKMPQRNLVSFNA 97
>XP_018856713.1 PREDICTED: pentatricopeptide repeat-containing protein At3g50420
[Juglans regia]
Length = 707
Score = 103 bits (258), Expect = 6e-24
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = +1
Query: 34 MPPTHEASVIATLIQICSSITSLKRARQLHALILTSNTTPINVQSPYPYNNVLSMYKRCG 213
MPP +E S +A LIQ C +ITSL++ RQLHAL+LT+ TT + Q+PY NN+LSMY RCG
Sbjct: 1 MPPLYEISTLAVLIQKCITITSLRKCRQLHALVLTTATT-FDAQTPYLNNNLLSMYARCG 59
Query: 214 SIREARKVFDEMPRRSLVSYNA 279
S+ E+R VFD+MP RSLVS+NA
Sbjct: 60 SLEESRLVFDKMPHRSLVSFNA 81
>XP_017969511.1 PREDICTED: pentatricopeptide repeat-containing protein At3g50420
[Theobroma cacao]
Length = 705
Score = 103 bits (257), Expect = 9e-24
Identities = 47/82 (57%), Positives = 66/82 (80%)
Frame = +1
Query: 34 MPPTHEASVIATLIQICSSITSLKRARQLHALILTSNTTPINVQSPYPYNNVLSMYKRCG 213
MPP++E +A+L++ C+SITSLK ARQLHAL+LT+ TP++ SPY NN++SMY RC
Sbjct: 1 MPPSYETCCLASLVKKCTSITSLKIARQLHALLLTTTQTPLDSPSPYLQNNLVSMYSRCN 60
Query: 214 SIREARKVFDEMPRRSLVSYNA 279
S+ +A+KVFD+ P R++VSYNA
Sbjct: 61 SLSDAKKVFDKTPSRNVVSYNA 82
>XP_016734761.1 PREDICTED: pentatricopeptide repeat-containing protein
At3g50420-like [Gossypium hirsutum]
Length = 704
Score = 102 bits (254), Expect = 2e-23
Identities = 46/82 (56%), Positives = 68/82 (82%)
Frame = +1
Query: 34 MPPTHEASVIATLIQICSSITSLKRARQLHALILTSNTTPINVQSPYPYNNVLSMYKRCG 213
M P++E+ +A+L+Q CSSIT+LK+ARQLHA +LT++TT ++ SPY +NN++SMY RC
Sbjct: 1 MLPSYESCYLASLVQKCSSITTLKKARQLHAFLLTTSTTCLHSPSPYLHNNLVSMYSRCN 60
Query: 214 SIREARKVFDEMPRRSLVSYNA 279
S+ +A+KVFD+ P R++VSYNA
Sbjct: 61 SLSDAKKVFDKTPHRNVVSYNA 82
>XP_010547511.1 PREDICTED: pentatricopeptide repeat-containing protein At3g50420
[Tarenaya hassleriana]
Length = 716
Score = 101 bits (252), Expect = 4e-23
Identities = 53/83 (63%), Positives = 68/83 (81%), Gaps = 1/83 (1%)
Frame = +1
Query: 34 MPPTHE-ASVIATLIQICSSITSLKRARQLHALILTSNTTPINVQSPYPYNNVLSMYKRC 210
MP T E A+ IA L + C+SITSLK+AR+LHALI+T+ VQSPYP NN++SMY RC
Sbjct: 17 MPLTKEVATSIAELTRKCASITSLKQARRLHALIITTT----GVQSPYPNNNLISMYVRC 72
Query: 211 GSIREARKVFDEMPRRSLVSYNA 279
GS++EARKVFD+MP+R++VSYNA
Sbjct: 73 GSVQEARKVFDKMPQRNIVSYNA 95
>XP_017638075.1 PREDICTED: pentatricopeptide repeat-containing protein At3g50420
isoform X2 [Gossypium arboreum]
Length = 589
Score = 101 bits (251), Expect = 5e-23
Identities = 45/82 (54%), Positives = 68/82 (82%)
Frame = +1
Query: 34 MPPTHEASVIATLIQICSSITSLKRARQLHALILTSNTTPINVQSPYPYNNVLSMYKRCG 213
M P++E+ +A+L+Q CSSIT++K+ARQLHA +LT++TT ++ SPY +NN++SMY RC
Sbjct: 1 MLPSYESCYLASLVQKCSSITTVKKARQLHAFLLTTSTTCLHSPSPYLHNNLVSMYSRCN 60
Query: 214 SIREARKVFDEMPRRSLVSYNA 279
S+ +A+KVFD+ P R++VSYNA
Sbjct: 61 SLSDAKKVFDKTPHRNVVSYNA 82
>XP_012436979.1 PREDICTED: pentatricopeptide repeat-containing protein At3g50420
[Gossypium raimondii] KJB48501.1 hypothetical protein
B456_008G072500 [Gossypium raimondii]
Length = 702
Score = 101 bits (251), Expect = 6e-23
Identities = 46/82 (56%), Positives = 67/82 (81%)
Frame = +1
Query: 34 MPPTHEASVIATLIQICSSITSLKRARQLHALILTSNTTPINVQSPYPYNNVLSMYKRCG 213
M P+ E+ +A+L+Q CSSIT+LK+ARQLHA +LT++TT ++ SPY +NN++SMY RC
Sbjct: 1 MLPSSESCYLASLVQKCSSITTLKKARQLHAFLLTTSTTCLHSPSPYLHNNLVSMYSRCN 60
Query: 214 SIREARKVFDEMPRRSLVSYNA 279
S+ +A+KVFD+ P R++VSYNA
Sbjct: 61 SLSDAKKVFDKTPHRNVVSYNA 82
>XP_017638074.1 PREDICTED: pentatricopeptide repeat-containing protein At3g50420
isoform X1 [Gossypium arboreum]
Length = 705
Score = 101 bits (251), Expect = 6e-23
Identities = 45/82 (54%), Positives = 68/82 (82%)
Frame = +1
Query: 34 MPPTHEASVIATLIQICSSITSLKRARQLHALILTSNTTPINVQSPYPYNNVLSMYKRCG 213
M P++E+ +A+L+Q CSSIT++K+ARQLHA +LT++TT ++ SPY +NN++SMY RC
Sbjct: 1 MLPSYESCYLASLVQKCSSITTVKKARQLHAFLLTTSTTCLHSPSPYLHNNLVSMYSRCN 60
Query: 214 SIREARKVFDEMPRRSLVSYNA 279
S+ +A+KVFD+ P R++VSYNA
Sbjct: 61 SLSDAKKVFDKTPHRNVVSYNA 82
>XP_016720682.1 PREDICTED: pentatricopeptide repeat-containing protein
At3g50420-like [Gossypium hirsutum]
Length = 705
Score = 100 bits (250), Expect = 8e-23
Identities = 45/82 (54%), Positives = 67/82 (81%)
Frame = +1
Query: 34 MPPTHEASVIATLIQICSSITSLKRARQLHALILTSNTTPINVQSPYPYNNVLSMYKRCG 213
M P +E+ +A+L+Q CSSIT++K+ARQLHA +LT++TT ++ SPY +NN++SMY RC
Sbjct: 1 MLPPYESCYLASLVQKCSSITTVKKARQLHAFLLTTSTTCLHFPSPYLHNNLVSMYSRCN 60
Query: 214 SIREARKVFDEMPRRSLVSYNA 279
S+ +A+KVFD+ P R++VSYNA
Sbjct: 61 SLSDAKKVFDKTPHRNVVSYNA 82
>XP_008338210.1 PREDICTED: pentatricopeptide repeat-containing protein At3g50420
[Malus domestica]
Length = 705
Score = 100 bits (248), Expect = 1e-22
Identities = 51/82 (62%), Positives = 67/82 (81%)
Frame = +1
Query: 34 MPPTHEASVIATLIQICSSITSLKRARQLHALILTSNTTPINVQSPYPYNNVLSMYKRCG 213
MPP++E IA LIQ C+S+TS K+ARQLHAL+LT TT + + PY YNNV+SMY RCG
Sbjct: 1 MPPSYE---IAALIQKCTSVTSPKQARQLHALLLT--TTTVGSRFPYLYNNVISMYWRCG 55
Query: 214 SIREARKVFDEMPRRSLVSYNA 279
S+ ++RKVFD+MP+R+LVS+NA
Sbjct: 56 SLGDSRKVFDKMPQRNLVSFNA 77
>XP_009376489.1 PREDICTED: pentatricopeptide repeat-containing protein
At3g50420-like [Pyrus x bretschneideri]
Length = 705
Score = 99.8 bits (247), Expect = 2e-22
Identities = 51/81 (62%), Positives = 66/81 (81%)
Frame = +1
Query: 34 MPPTHEASVIATLIQICSSITSLKRARQLHALILTSNTTPINVQSPYPYNNVLSMYKRCG 213
MPP+ E IA LIQ C+S+TS K+ARQLHAL+LT TT + +SPY YNNV+SMY RCG
Sbjct: 1 MPPSSE---IAALIQKCTSVTSPKQARQLHALLLT--TTTVGSRSPYLYNNVISMYWRCG 55
Query: 214 SIREARKVFDEMPRRSLVSYN 276
S+ ++RKVFD+MP+R+LVS+N
Sbjct: 56 SLGDSRKVFDKMPQRNLVSFN 76
>XP_004301858.1 PREDICTED: pentatricopeptide repeat-containing protein At3g50420
[Fragaria vesca subsp. vesca]
Length = 704
Score = 98.6 bits (244), Expect = 5e-22
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = +1
Query: 34 MPPTHEASVIATLIQICSSITSLKRARQLHALILTSNTTPINVQSPYPYNNVLSMYKRCG 213
MPP E IA LIQ C++ITSL+ AR++H+L+LT TT + +S Y YNNVLSMY RCG
Sbjct: 1 MPPLGEP--IAALIQKCTAITSLREARRIHSLLLT--TTTVGSRSVYMYNNVLSMYARCG 56
Query: 214 SIREARKVFDEMPRRSLVSYNA 279
S+ +ARKVFDEMP+RS+VS+NA
Sbjct: 57 SVGDARKVFDEMPQRSVVSFNA 78
>GAV86957.1 PPR domain-containing protein/PPR_2 domain-containing protein
[Cephalotus follicularis]
Length = 699
Score = 95.9 bits (237), Expect = 4e-21
Identities = 44/71 (61%), Positives = 59/71 (83%)
Frame = +1
Query: 67 TLIQICSSITSLKRARQLHALILTSNTTPINVQSPYPYNNVLSMYKRCGSIREARKVFDE 246
+LIQ C+SI SLK+ARQLH+L++T+ TT QSP+ YNN+LSMY RCGS+ +A+ VFD+
Sbjct: 3 SLIQKCTSINSLKKARQLHSLLITTTTTAFYAQSPFLYNNLLSMYARCGSLGDAKLVFDK 62
Query: 247 MPRRSLVSYNA 279
MP R+LVS+NA
Sbjct: 63 MPHRNLVSFNA 73
>KRH28530.1 hypothetical protein GLYMA_11G059600 [Glycine max]
Length = 981
Score = 95.1 bits (235), Expect = 8e-21
Identities = 45/71 (63%), Positives = 59/71 (83%)
Frame = +1
Query: 67 TLIQICSSITSLKRARQLHALILTSNTTPINVQSPYPYNNVLSMYKRCGSIREARKVFDE 246
+L+Q CS++TSL+ ARQLHALILT+ TT QSP+ YNN+LSMY RCGS+ ++ VFD+
Sbjct: 281 SLLQKCSTVTSLREARQLHALILTT-TTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDK 339
Query: 247 MPRRSLVSYNA 279
MPRR++VSYNA
Sbjct: 340 MPRRTIVSYNA 350
>NP_001327161.1 Pentatricopeptide repeat (PPR) superfamily protein [Arabidopsis
thaliana] ANM65172.1 Pentatricopeptide repeat (PPR)
superfamily protein [Arabidopsis thaliana]
Length = 769
Score = 94.7 bits (234), Expect = 1e-20
Identities = 47/84 (55%), Positives = 61/84 (72%)
Frame = +1
Query: 28 YFMPPTHEASVIATLIQICSSITSLKRARQLHALILTSNTTPINVQSPYPYNNVLSMYKR 207
+FMP AS + L + C SIT LKRARQ+HAL+LT+ +SPY NN++SMY R
Sbjct: 86 FFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAAT-ESPYANNNLISMYVR 144
Query: 208 CGSIREARKVFDEMPRRSLVSYNA 279
CGS+ +ARKVFD+MP R++VSYNA
Sbjct: 145 CGSLEQARKVFDKMPHRNVVSYNA 168
>NP_190611.1 Pentatricopeptide repeat (PPR) superfamily protein [Arabidopsis
thaliana] Q9SCT2.1 RecName: Full=Pentatricopeptide
repeat-containing protein At3g50420 CAB62471.1 putative
protein [Arabidopsis thaliana] AEE78665.1
Pentatricopeptide repeat (PPR) superfamily protein
[Arabidopsis thaliana]
Length = 794
Score = 94.7 bits (234), Expect = 1e-20
Identities = 47/84 (55%), Positives = 61/84 (72%)
Frame = +1
Query: 28 YFMPPTHEASVIATLIQICSSITSLKRARQLHALILTSNTTPINVQSPYPYNNVLSMYKR 207
+FMP AS + L + C SIT LKRARQ+HAL+LT+ +SPY NN++SMY R
Sbjct: 86 FFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAAT-ESPYANNNLISMYVR 144
Query: 208 CGSIREARKVFDEMPRRSLVSYNA 279
CGS+ +ARKVFD+MP R++VSYNA
Sbjct: 145 CGSLEQARKVFDKMPHRNVVSYNA 168
>XP_015065070.1 PREDICTED: pentatricopeptide repeat-containing protein At3g50420
[Solanum pennellii]
Length = 719
Score = 94.4 bits (233), Expect = 2e-20
Identities = 48/83 (57%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Frame = +1
Query: 34 MPPTHEASVIATL-IQICSSITSLKRARQLHALILTSNTTPINVQSPYPYNNVLSMYKRC 210
MPP EAS IA L I C+SITS+ +ARQLHALILTS P ++PY +NN+LSMY RC
Sbjct: 1 MPPLSEASSIAALVINKCNSITSISKARQLHALILTS--VPATSRTPYVFNNILSMYARC 58
Query: 211 GSIREARKVFDEMPRRSLVSYNA 279
GSI+++ +FD+MP R+++S+NA
Sbjct: 59 GSIQDSHILFDKMPDRNVISFNA 81