BLASTX nr result

ID: Phellodendron21_contig00043163 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00043163
         (366 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AEK71475.1 hypothetical chloroplast RF2 (plastid) [Eucryphia luc...    55   2e-06
AEK71591.1 hypothetical chloroplast RF2 (plastid) [Terminalia ca...    54   6e-06
YP_009338673.1 hypothetical chloroplast RF2 (chloroplast) [Averr...    54   6e-06
ANY60256.1 hypothetical chloroplast RF21 (chloroplast) [Averrhoa...    54   6e-06

>AEK71475.1 hypothetical chloroplast RF2 (plastid) [Eucryphia lucida]
          Length = 2270

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +3

Query: 24  FPGSEESTWDLPITKMCIMPEINWGLWW*RN 116
           F   +ESTW LPITK CIMPE NWGLWW RN
Sbjct: 152 FLDPKESTWVLPITKKCIMPESNWGLWWWRN 182


>AEK71591.1 hypothetical chloroplast RF2 (plastid) [Terminalia catappa]
          Length = 2271

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +3

Query: 24  FPGSEESTWDLPITKMCIMPEINWGLWW*RN 116
           FP  +ESTW LPITK CIMPE NWGL W RN
Sbjct: 148 FPDPKESTWVLPITKKCIMPESNWGLRWWRN 178


>YP_009338673.1 hypothetical chloroplast RF2 (chloroplast) [Averrhoa carambola]
           YP_009338689.1 hypothetical chloroplast RF2
           (chloroplast) [Averrhoa carambola] ANU80197.1
           hypothetical chloroplast RF2 (chloroplast) [Averrhoa
           carambola] ANU80213.1 hypothetical chloroplast RF2
           (chloroplast) [Averrhoa carambola]
          Length = 2290

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 24/39 (61%), Positives = 27/39 (69%)
 Frame = +3

Query: 24  FPGSEESTWDLPITKMCIMPEINWGLWW*RN*GLQKEEF 140
           F   +ESTW LPITK CIMPE NWG WW RN   +K +F
Sbjct: 153 FLDPKESTWFLPITKKCIMPESNWGSWWWRNWIGKKRDF 191


>ANY60256.1 hypothetical chloroplast RF21 (chloroplast) [Averrhoa carambola]
           ANY60257.1 hypothetical chloroplast RF21 (chloroplast)
           [Averrhoa carambola]
          Length = 2294

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 24/39 (61%), Positives = 27/39 (69%)
 Frame = +3

Query: 24  FPGSEESTWDLPITKMCIMPEINWGLWW*RN*GLQKEEF 140
           F   +ESTW LPITK CIMPE NWG WW RN   +K +F
Sbjct: 153 FLDPKESTWFLPITKKCIMPESNWGSWWWRNWIGKKRDF 191


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