BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00042656
         (326 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ADN33807.1 ty1-copia retrotransposon protein [Cucumis melo subsp...    73   7e-13
CAN62130.1 hypothetical protein VITISV_019730 [Vitis vinifera]         72   1e-12
KYP36589.1 Retrovirus-related Pol polyprotein from transposon TN...    72   1e-12
KYP64289.1 Retrovirus-related Pol polyprotein from transposon TN...    72   1e-12
KYP64290.1 Retrovirus-related Pol polyprotein from transposon TN...    72   1e-12
KYP33726.1 Retrovirus-related Pol polyprotein from transposon TN...    68   5e-11
ABN08353.1 Polynucleotidyl transferase, Ribonuclease H fold, par...    64   6e-11
KYP72325.1 Retrovirus-related Pol polyprotein from transposon TN...    67   1e-10
OMO54671.1 Integrase, catalytic core [Corchorus capsularis]            67   1e-10
KYP54652.1 Retrovirus-related Pol polyprotein from transposon TN...    65   5e-10
ABF95851.1 retrotransposon protein, putative, Ty1-copia subclass...    64   9e-10
KYP31709.1 Retrovirus-related Pol polyprotein from transposon TN...    64   1e-09
AAR13298.1 gag-pol polyprotein [Phaseolus vulgaris]                    64   2e-09
OMO89770.1 Integrase, catalytic core [Corchorus capsularis]            62   6e-09
CAN73567.1 hypothetical protein VITISV_003451 [Vitis vinifera]         62   6e-09
CAN66637.1 hypothetical protein VITISV_011340 [Vitis vinifera]         62   6e-09
CAN80619.1 hypothetical protein VITISV_005064 [Vitis vinifera]         60   2e-08
ABA97460.1 retrotransposon protein, putative, Ty1-copia subclass...    59   5e-08
ABA93820.1 retrotransposon protein, putative, Ty1-copia subclass...    59   5e-08
KZV23924.1 hypothetical protein F511_22499 [Dorcoceras hygrometr...    59   7e-08

>ADN33807.1 ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1038

 Score = 73.2 bits (178), Expect = 7e-13
 Identities = 40/82 (48%), Positives = 50/82 (60%)
 Frame = +1

Query: 37  GRAMLLGCLIHNRISYKRIVKTLYELWRSFNA**SYLKL*GCLVKVSKLDSKRTRLRPKT 216
           G A+L  C I NRI +KR+ KT YELW+      SYLK+ GCL KV     K+T + PKT
Sbjct: 654 GEAVLSACFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKT 713

Query: 217 VDHMVIWYSQNSIDYVFLVLRD 282
            D + I Y+QNS  Y F+ L D
Sbjct: 714 FDCIFIEYAQNSAAYRFMCLND 735


>CAN62130.1 hypothetical protein VITISV_019730 [Vitis vinifera]
          Length = 438

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 39/85 (45%), Positives = 52/85 (61%)
 Frame = +1

Query: 37  GRAMLLGCLIHNRISYKRIVKTLYELWRSFNA**SYLKL*GCLVKVSKLDSKRTRLRPKT 216
           G  +L    I N I YKRI KT YELW+ +    +YL++ GCL KV  L+ K+ +L PKT
Sbjct: 117 GETILSARHIQNTIPYKRIGKTPYELWKGYAPNIAYLRVWGCLAKVLFLEPKKRKLAPKT 176

Query: 217 VDHMVIWYSQNSIDYVFLVLRDNNN 291
            D M I Y++NS  Y FLV +  N+
Sbjct: 177 FDAMFIGYAKNSXTYRFLVTKLENS 201


>KYP36589.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 655

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 36/83 (43%), Positives = 51/83 (61%)
 Frame = +1

Query: 37  GRAMLLGCLIHNRISYKRIVKTLYELWRSFNA**SYLKL*GCLVKVSKLDSKRTRLRPKT 216
           G A+L  C + NRI ++R  KT YELW+ +     YL++ GCL KV   D K+ ++ PKT
Sbjct: 16  GEALLTACFLQNRIPHRRTGKTPYELWKGYVPNLKYLRVWGCLAKVLLPDPKKRKIGPKT 75

Query: 217 VDHMVIWYSQNSIDYVFLVLRDN 285
            D M I Y++ S  Y FLVL+ +
Sbjct: 76  SDCMFIGYAERSAAYRFLVLKSS 98


>KYP64289.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1012

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 36/83 (43%), Positives = 51/83 (61%)
 Frame = +1

Query: 37  GRAMLLGCLIHNRISYKRIVKTLYELWRSFNA**SYLKL*GCLVKVSKLDSKRTRLRPKT 216
           G A+L  C + NRI ++R  KT YELW+ +     YL++ GCL KV   D K+ ++ PKT
Sbjct: 337 GEALLTACFLQNRIPHRRTGKTPYELWKGYVPNLKYLRVWGCLAKVLLPDPKKRKIGPKT 396

Query: 217 VDHMVIWYSQNSIDYVFLVLRDN 285
            D M I Y++ S  Y FLVL+ +
Sbjct: 397 SDCMFIGYAERSAAYRFLVLKSS 419


>KYP64290.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1215

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 36/83 (43%), Positives = 51/83 (61%)
 Frame = +1

Query: 37  GRAMLLGCLIHNRISYKRIVKTLYELWRSFNA**SYLKL*GCLVKVSKLDSKRTRLRPKT 216
           G A+L  C + NRI ++R  KT YELW+ +     YL++ GCL KV   D K+ ++ PKT
Sbjct: 562 GEALLTACFLQNRIPHRRTGKTPYELWKGYVPNLKYLRVWGCLAKVLLPDPKKRKIGPKT 621

Query: 217 VDHMVIWYSQNSIDYVFLVLRDN 285
            D M I Y++ S  Y FLVL+ +
Sbjct: 622 SDCMFIGYAERSAAYRFLVLKSS 644


>KYP33726.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 880

 Score = 67.8 bits (164), Expect = 5e-11
 Identities = 36/81 (44%), Positives = 50/81 (61%)
 Frame = +1

Query: 37  GRAMLLGCLIHNRISYKRIVKTLYELWRSFNA**SYLKL*GCLVKVSKLDSKRTRLRPKT 216
           G A+   C I NRI YK   KT YELW++      YLK+ GCL KV+   +K+ ++ PKT
Sbjct: 541 GEALFTACHILNRIPYKNSDKTPYELWKNRKPNLKYLKVWGCLAKVNIPINKKRKIGPKT 600

Query: 217 VDHMVIWYSQNSIDYVFLVLR 279
           VD + + YS +S  Y FLV++
Sbjct: 601 VDCVFLGYSLHSTTYRFLVIK 621


>ABN08353.1 Polynucleotidyl transferase, Ribonuclease H fold, partial [Medicago
           truncatula]
          Length = 114

 Score = 63.9 bits (154), Expect = 6e-11
 Identities = 33/81 (40%), Positives = 48/81 (59%)
 Frame = +1

Query: 43  AMLLGCLIHNRISYKRIVKTLYELWRSFNA**SYLKL*GCLVKVSKLDSKRTRLRPKTVD 222
           A+L  C +  RI ++   KT YELW+ +     YLK+ GCL KV   D K+ ++  KT D
Sbjct: 1   ALLTACFLQTRIPHRFTGKTPYELWKGYKPSLKYLKVWGCLAKVMLPDPKKRKIGFKTSD 60

Query: 223 HMVIWYSQNSIDYVFLVLRDN 285
            + I Y++NS  Y FLVL+ +
Sbjct: 61  CLFIGYAENSAAYRFLVLQSD 81


>KYP72325.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 565

 Score = 67.0 bits (162), Expect = 1e-10
 Identities = 36/80 (45%), Positives = 49/80 (61%)
 Frame = +1

Query: 37  GRAMLLGCLIHNRISYKRIVKTLYELWRSFNA**SYLKL*GCLVKVSKLDSKRTRLRPKT 216
           G A+   C I NRI YK   KT YELW++      YLK+ GCL KV+   +K+ ++ PKT
Sbjct: 211 GEALFTACHILNRIPYKNSDKTPYELWKNRKPNLKYLKVWGCLAKVNIPINKKRKIGPKT 270

Query: 217 VDHMVIWYSQNSIDYVFLVL 276
           VD + + YS +S  Y FLV+
Sbjct: 271 VDCVFLGYSLHSTTYRFLVI 290


>OMO54671.1 Integrase, catalytic core [Corchorus capsularis]
          Length = 653

 Score = 66.6 bits (161), Expect = 1e-10
 Identities = 35/83 (42%), Positives = 49/83 (59%)
 Frame = +1

Query: 37  GRAMLLGCLIHNRISYKRIVKTLYELWRSFNA**SYLKL*GCLVKVSKLDSKRTRLRPKT 216
           G A+L  C + NRI YK+  KT YE+W+       YLK  GCL KV   D K+ ++  KT
Sbjct: 323 GEALLSACHVQNRIPYKKTGKTPYEIWKGCAPNLKYLKCGGCLAKVLLPDIKKRKVGSKT 382

Query: 217 VDHMVIWYSQNSIDYVFLVLRDN 285
            D + I Y+++S  Y FLVL+ +
Sbjct: 383 SDCLFIGYAEHSAAYRFLVLKSD 405


>KYP54652.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 900

 Score = 65.1 bits (157), Expect = 5e-10
 Identities = 33/83 (39%), Positives = 49/83 (59%)
 Frame = +1

Query: 37  GRAMLLGCLIHNRISYKRIVKTLYELWRSFNA**SYLKL*GCLVKVSKLDSKRTRLRPKT 216
           G A+L    + NRI ++R  KT YELW+ +     YL++ GCL K+   D K+ ++ PKT
Sbjct: 225 GEALLTARFLQNRIPHRRTGKTPYELWKGYVPNLKYLRVRGCLAKMLLPDPKKRKIGPKT 284

Query: 217 VDHMVIWYSQNSIDYVFLVLRDN 285
            D M I Y++ S  Y FLV + +
Sbjct: 285 SDCMFIGYAERSAAYRFLVFKSS 307


>ABF95851.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1075

 Score = 64.3 bits (155), Expect = 9e-10
 Identities = 34/81 (41%), Positives = 49/81 (60%)
 Frame = +1

Query: 37  GRAMLLGCLIHNRISYKRIVKTLYELWRSFNA**SYLKL*GCLVKVSKLDSKRTRLRPKT 216
           G A+   C + NR+  K    T YELW+      ++LK+ GCL KV+    K+ +L PKT
Sbjct: 523 GEALYTACFVLNRVPAKGTEVTPYELWKGRKPNLNFLKVWGCLAKVNIPVVKKRKLGPKT 582

Query: 217 VDHMVIWYSQNSIDYVFLVLR 279
           VD + I Y+QNS+ Y FLV++
Sbjct: 583 VDCVFIGYAQNSLAYRFLVVK 603


>KYP31709.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 714

 Score = 63.9 bits (154), Expect = 1e-09
 Identities = 35/80 (43%), Positives = 48/80 (60%)
 Frame = +1

Query: 37  GRAMLLGCLIHNRISYKRIVKTLYELWRSFNA**SYLKL*GCLVKVSKLDSKRTRLRPKT 216
           G A+   C I NRI YK   KT YELW++      YLK+  CL KV+   +K+ ++ PKT
Sbjct: 539 GEALFTACHILNRIPYKNSDKTPYELWKNRKPNLKYLKVWWCLAKVNIPINKKRKIGPKT 598

Query: 217 VDHMVIWYSQNSIDYVFLVL 276
           VD + + YS +S  Y FLV+
Sbjct: 599 VDCVFLGYSLHSTTYRFLVI 618


>AAR13298.1 gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score = 63.5 bits (153), Expect = 2e-09
 Identities = 31/83 (37%), Positives = 49/83 (59%)
 Frame = +1

Query: 37  GRAMLLGCLIHNRISYKRIVKTLYELWRSFNA**SYLKL*GCLVKVSKLDSKRTRLRPKT 216
           G ++L  C + NRI +++  KT YELW+ +     YL++ G L KV   D K+ ++  KT
Sbjct: 619 GESLLTACFLQNRIPHRKTGKTPYELWKGYQPNLKYLRVWGSLAKVMLPDPKKRKIGSKT 678

Query: 217 VDHMVIWYSQNSIDYVFLVLRDN 285
            D M + Y+++S  Y FLVL  +
Sbjct: 679 SDCMFLGYAEHSAAYRFLVLNSD 701


>OMO89770.1 Integrase, catalytic core [Corchorus capsularis]
          Length = 1020

 Score = 62.0 bits (149), Expect = 6e-09
 Identities = 32/83 (38%), Positives = 50/83 (60%)
 Frame = +1

Query: 37  GRAMLLGCLIHNRISYKRIVKTLYELWRSFNA**SYLKL*GCLVKVSKLDSKRTRLRPKT 216
           G+A+L  C + NRI YK+  KT YE+W+ +      LK+ GCL K    D K+ ++  KT
Sbjct: 576 GKALLSTCHVQNRIPYKKTSKTPYEIWKGYAPNLKNLKVWGCLAKELLPDIKKRKVGSKT 635

Query: 217 VDHMVIWYSQNSIDYVFLVLRDN 285
            + + I Y+++S  Y FLVL+ +
Sbjct: 636 SNCLFIGYAEHSAAYRFLVLKSD 658


>CAN73567.1 hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score = 62.0 bits (149), Expect = 6e-09
 Identities = 32/83 (38%), Positives = 48/83 (57%)
 Frame = +1

Query: 37  GRAMLLGCLIHNRISYKRIVKTLYELWRSFNA**SYLKL*GCLVKVSKLDSKRTRLRPKT 216
           G A+L    + N++  K+  KT YELW+      +YL++ GCL KV+    K+ ++ PKT
Sbjct: 657 GEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYTYLRMWGCLAKVAVPPPKKVKIGPKT 716

Query: 217 VDHMVIWYSQNSIDYVFLVLRDN 285
           +D + I Y+ NS  Y FLV   N
Sbjct: 717 IDCIFIGYAHNSNAYRFLVYESN 739


>CAN66637.1 hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score = 62.0 bits (149), Expect = 6e-09
 Identities = 32/83 (38%), Positives = 48/83 (57%)
 Frame = +1

Query: 37  GRAMLLGCLIHNRISYKRIVKTLYELWRSFNA**SYLKL*GCLVKVSKLDSKRTRLRPKT 216
           G A+L    + N++  K+  KT YELW+      +YL++ GCL KV+    K+ ++ PKT
Sbjct: 657 GEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYTYLRMWGCLAKVAVPPPKKVKIGPKT 716

Query: 217 VDHMVIWYSQNSIDYVFLVLRDN 285
           +D + I Y+ NS  Y FLV   N
Sbjct: 717 IDCIFIGYAHNSNAYRFLVYESN 739


>CAN80619.1 hypothetical protein VITISV_005064 [Vitis vinifera]
          Length = 965

 Score = 60.5 bits (145), Expect = 2e-08
 Identities = 34/85 (40%), Positives = 45/85 (52%)
 Frame = +1

Query: 37  GRAMLLGCLIHNRISYKRIVKTLYELWRSFNA**SYLKL*GCLVKVSKLDSKRTRLRPKT 216
           G A++  C   NRI YKR  KT YELW+ +    +YLK+ GC               PKT
Sbjct: 393 GEAIISACHSQNRIPYKRTGKTPYELWKDYAPNIAYLKVWGC---------------PKT 437

Query: 217 VDHMVIWYSQNSIDYVFLVLRDNNN 291
            D M I Y++NS+ Y FLV +  N+
Sbjct: 438 FDTMFIGYAENSMAYKFLVTKSKNS 462


>ABA97460.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 786

 Score = 59.3 bits (142), Expect = 5e-08
 Identities = 32/83 (38%), Positives = 51/83 (61%)
 Frame = +1

Query: 31  ILGRAMLLGCLIHNRISYKRIVKTLYELWRSFNA**SYLKL*GCLVKVSKLDSKRTRLRP 210
           ++G A+L    + NR+  +   KT YE+W       SYL+  GCLVKV+   +K+ +L P
Sbjct: 1   MVGDALLTSNHVLNRVPNRNKDKTAYEIWIGRKPSLSYLRTWGCLVKVNVPITKKRKLGP 60

Query: 211 KTVDHMVIWYSQNSIDYVFLVLR 279
           KTVD + + Y+ +SI Y FL+++
Sbjct: 61  KTVDCVFLGYAHHSIAYRFLIVK 83


>ABA93820.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1166

 Score = 59.3 bits (142), Expect = 5e-08
 Identities = 31/81 (38%), Positives = 49/81 (60%)
 Frame = +1

Query: 37  GRAMLLGCLIHNRISYKRIVKTLYELWRSFNA**SYLKL*GCLVKVSKLDSKRTRLRPKT 216
           G A+L+   + NR+  +   KT YE+W       SYL+  GCL KV+   +K+ +L PKT
Sbjct: 484 GEALLISNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKT 543

Query: 217 VDHMVIWYSQNSIDYVFLVLR 279
           VD + + Y+ +SI Y FL+++
Sbjct: 544 VDRVFLGYAHHSIAYRFLIVK 564


>KZV23924.1 hypothetical protein F511_22499 [Dorcoceras hygrometricum]
          Length = 885

 Score = 58.9 bits (141), Expect = 7e-08
 Identities = 34/79 (43%), Positives = 44/79 (55%)
 Frame = +1

Query: 37  GRAMLLGCLIHNRISYKRIVKTLYELWRSFNA**SYLKL*GCLVKVSKLDSKRTRLRPKT 216
           G A+L    I N+I  K+  KT YELW+       YLK+ GCL KV     K+ ++ PKT
Sbjct: 546 GEAILSANHILNKIPQKKKDKTPYELWKGHKPSYKYLKVWGCLAKVEVPKPKQVKIGPKT 605

Query: 217 VDHMVIWYSQNSIDYVFLV 273
            D + I Y+ NS  Y FLV
Sbjct: 606 FDGIFIGYANNSSAYRFLV 624