BLASTX nr result

ID: Phellodendron21_contig00042498 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00042498
         (373 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KDO57555.1 hypothetical protein CISIN_1g040169mg, partial [Citru...    93   1e-19
XP_006479070.1 PREDICTED: chaperonin CPN60-2, mitochondrial-like...    70   1e-11
XP_006479071.1 PREDICTED: chaperonin CPN60-2, mitochondrial-like...    60   4e-08
XP_015386161.1 PREDICTED: chaperonin CPN60-1, mitochondrial-like...    55   2e-06

>KDO57555.1 hypothetical protein CISIN_1g040169mg, partial [Citrus sinensis]
          Length = 459

 Score = 92.8 bits (229), Expect = 1e-19
 Identities = 50/80 (62%), Positives = 57/80 (71%), Gaps = 4/80 (5%)
 Frame = +2

Query: 146 LIDRRLSWSRNYTGLDINLGG----QDRDAIEESFLPGGGVSFLQKVKNPTCDLDEYGIK 313
           ++  RLSWSRNY   DI L      +D   IEESFL G    F+Q+VKNPTC+ DEYGIK
Sbjct: 1   VVPSRLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTG----FMQQVKNPTCEPDEYGIK 56

Query: 314 YLPVMRQAMYIEGRRVLEAG 373
           YLPVM QAM IEGR+VLEAG
Sbjct: 57  YLPVMHQAMCIEGRKVLEAG 76


>XP_006479070.1 PREDICTED: chaperonin CPN60-2, mitochondrial-like isoform X1
           [Citrus sinensis]
          Length = 537

 Score = 70.1 bits (170), Expect = 1e-11
 Identities = 46/108 (42%), Positives = 57/108 (52%), Gaps = 11/108 (10%)
 Frame = +2

Query: 83  MFQRIAPSLTSKVRFTKNNLQLIDRRLSWSRNYTGLD----------INLGGQDRDAIEE 232
           M    A  L SKVR   N       RLSW R++   D          I++   DR   EE
Sbjct: 2   MMLPFASGLASKVRLPNNY------RLSWRRSFGAYDVSQRPMASELISVSTPDRYVTEE 55

Query: 233 SFLPGGG-VSFLQKVKNPTCDLDEYGIKYLPVMRQAMYIEGRRVLEAG 373
           +FLP GG   FL++ KN  C+ DEYG KYLP +RQA+   G +VLEAG
Sbjct: 56  TFLPSGGNACFLEQAKNWACNPDEYGGKYLPGVRQALCTGGCKVLEAG 103


>XP_006479071.1 PREDICTED: chaperonin CPN60-2, mitochondrial-like isoform X2
           [Citrus sinensis]
          Length = 500

 Score = 60.1 bits (144), Expect = 4e-08
 Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
 Frame = +2

Query: 194 INLGGQDRDAIEESFLPGGG-VSFLQKVKNPTCDLDEYGIKYLPVMRQAMYIEGRRVLEA 370
           I++   DR   EE+FLP GG   FL++ KN  C+ DEYG KYLP +RQA+   G +VLEA
Sbjct: 6   ISVSTPDRYVTEETFLPSGGNACFLEQAKNWACNPDEYGGKYLPGVRQALCTGGCKVLEA 65

Query: 371 G 373
           G
Sbjct: 66  G 66


>XP_015386161.1 PREDICTED: chaperonin CPN60-1, mitochondrial-like isoform X2
           [Citrus sinensis]
          Length = 520

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 38/100 (38%), Positives = 48/100 (48%), Gaps = 17/100 (17%)
 Frame = +2

Query: 92  RIAPSLTSKVRFTKNNLQLIDRRLSWSRNYT--GLDINLGG---------------QDRD 220
           R+A  + S VR   NN      RLSW RNY   G D N G                +D +
Sbjct: 3   RLASRIASNVRLPNNN------RLSWRRNYAHAGKDNNYGADDVIQRPMLSELITNKDLN 56

Query: 221 AIEESFLPGGGVSFLQKVKNPTCDLDEYGIKYLPVMRQAM 340
            IEESFL   G  F+++  NP C+ DE+G KY  VM  A+
Sbjct: 57  VIEESFL-ASGARFVKQALNPLCNPDEHGFKYWGVMSSAV 95


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