BLASTX nr result
ID: Phellodendron21_contig00042297
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00042297
(333 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP61936.1 Retrovirus-related Pol polyprotein from transposon TN... 147 3e-40
CAN78069.1 hypothetical protein VITISV_032701 [Vitis vinifera] 149 2e-39
CAN71183.1 hypothetical protein VITISV_033416 [Vitis vinifera] 148 4e-39
BAG72096.1 Gag-protease-integrase-RT-RNaseH polyprotein [Glycine... 148 4e-39
XP_011624299.1 PREDICTED: retrovirus-related Pol polyprotein fro... 147 4e-39
CAN81793.1 hypothetical protein VITISV_020571 [Vitis vinifera] 147 5e-39
CAN78154.1 hypothetical protein VITISV_032622 [Vitis vinifera] 147 5e-39
CAN67821.1 hypothetical protein VITISV_025855, partial [Vitis vi... 147 5e-39
CAN83623.1 hypothetical protein VITISV_010870 [Vitis vinifera] 147 5e-39
EMT12132.1 Eukaryotic translation initiation factor 3 subunit A ... 147 7e-39
CBI20118.3 unnamed protein product, partial [Vitis vinifera] 146 1e-38
ABA95205.1 retrotransposon protein, putative, Ty1-copia subclass... 146 2e-38
CDF77009.1 hypothetical transposable element-related protein, pa... 145 4e-38
CAN81238.1 hypothetical protein VITISV_031073 [Vitis vinifera] 145 4e-38
ABF94883.1 transposon protein, putative, unclassified [Oryza sat... 144 6e-38
CAN62045.1 hypothetical protein VITISV_040357 [Vitis vinifera] 143 2e-37
KYP52774.1 Retrovirus-related Pol polyprotein from transposon TN... 143 2e-37
KYP35727.1 Retrovirus-related Pol polyprotein from transposon TN... 143 2e-37
AAD12998.1 pol polyprotein [Zea mays] 143 2e-37
CAN61066.1 hypothetical protein VITISV_004412 [Vitis vinifera] 143 2e-37
>KYP61936.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 428
Score = 147 bits (370), Expect = 3e-40
Identities = 70/110 (63%), Positives = 86/110 (78%)
Frame = +3
Query: 3 LIKEKSEALDKFKIFKTEVEKQLGKIIKIVRSDQGGEYYGKHGVSGQIKGPFARYLEDCG 182
L++ K EALD FK+FK EVE Q GK IKIVRSD+GGEYYGK+ +GQ G FAR+L++ G
Sbjct: 315 LLRSKDEALDAFKVFKAEVELQCGKQIKIVRSDRGGEYYGKYTENGQAPGLFARFLQEHG 374
Query: 183 IVSQFTMLGSPEQNGVAERRNRTLQEMTRSMMSRTNLPDYLWGEAIKTTL 332
V+Q+TML SP+QNGVAERRNRTL +M RSM S LP +LW EA+KT +
Sbjct: 375 FVAQYTMLSSPDQNGVAERRNRTLMDMVRSMRSNAKLPQFLWAEALKTAV 424
>CAN78069.1 hypothetical protein VITISV_032701 [Vitis vinifera]
Length = 1381
Score = 149 bits (375), Expect = 2e-39
Identities = 75/111 (67%), Positives = 89/111 (80%), Gaps = 1/111 (0%)
Frame = +3
Query: 3 LIKEKSEALDKFKIFKTEVEKQLGKIIKIVRSDQGGEYYGKH-GVSGQIKGPFARYLEDC 179
LI EKS++LD FK FKTEVE QL K IK VRSD GGEYYG++ G S Q GPFA+YL +C
Sbjct: 566 LIHEKSQSLDVFKNFKTEVENQLSKKIKAVRSDHGGEYYGRYDGSSEQRPGPFAKYLMEC 625
Query: 180 GIVSQFTMLGSPEQNGVAERRNRTLQEMTRSMMSRTNLPDYLWGEAIKTTL 332
GIV Q+TM G+P QNGVAERRNRTL++M RSM+S + LP+ LWGEAIKT +
Sbjct: 626 GIVPQYTMPGTPSQNGVAERRNRTLKDMVRSMISHSTLPESLWGEAIKTAV 676
>CAN71183.1 hypothetical protein VITISV_033416 [Vitis vinifera]
Length = 1255
Score = 148 bits (373), Expect = 4e-39
Identities = 70/110 (63%), Positives = 90/110 (81%)
Frame = +3
Query: 3 LIKEKSEALDKFKIFKTEVEKQLGKIIKIVRSDQGGEYYGKHGVSGQIKGPFARYLEDCG 182
++ K+EALD FK+FK EVEKQ GK IKIVRSD+GGEYYG++ GQ GPFA++L++ G
Sbjct: 599 ILHNKNEALDAFKVFKAEVEKQYGKQIKIVRSDRGGEYYGRYLEDGQPPGPFAKFLQEHG 658
Query: 183 IVSQFTMLGSPEQNGVAERRNRTLQEMTRSMMSRTNLPDYLWGEAIKTTL 332
IV+Q+TM GSP+QNGVAERRNRTL +M RSM+S + LP +LW EA+KT +
Sbjct: 659 IVAQYTMPGSPDQNGVAERRNRTLLDMVRSMLSSSKLPKFLWTEALKTAV 708
>BAG72096.1 Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
Length = 1321
Score = 148 bits (373), Expect = 4e-39
Identities = 71/108 (65%), Positives = 87/108 (80%)
Frame = +3
Query: 3 LIKEKSEALDKFKIFKTEVEKQLGKIIKIVRSDQGGEYYGKHGVSGQIKGPFARYLEDCG 182
L+ K EALD FK+FK EVE Q GK IKIVRSD+GGEYYG++ +GQ GPFA++L++ G
Sbjct: 484 LLHNKYEALDAFKVFKAEVENQCGKQIKIVRSDRGGEYYGRYTENGQAPGPFAKFLQEHG 543
Query: 183 IVSQFTMLGSPEQNGVAERRNRTLQEMTRSMMSRTNLPDYLWGEAIKT 326
IV+Q+TM GSP QNGVAERRNRTL +M RSM+S +NLP LW EA+KT
Sbjct: 544 IVAQYTMPGSPNQNGVAERRNRTLLDMVRSMLSNSNLPKSLWAEALKT 591
>XP_011624299.1 PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94, partial [Amborella trichopoda]
Length = 747
Score = 147 bits (372), Expect = 4e-39
Identities = 73/109 (66%), Positives = 88/109 (80%), Gaps = 1/109 (0%)
Frame = +3
Query: 3 LIKEKSEALDKFKIFKTEVEKQLGKIIKIVRSDQGGEYYGKHGVSGQIK-GPFARYLEDC 179
L+ EKS+ LD FK FK EVE QL K IK VRSD+GGEYYG++ SG+ + GPFARYLE+C
Sbjct: 522 LLHEKSQVLDVFKSFKAEVENQLSKRIKQVRSDRGGEYYGRYDGSGEQRPGPFARYLEEC 581
Query: 180 GIVSQFTMLGSPEQNGVAERRNRTLQEMTRSMMSRTNLPDYLWGEAIKT 326
GIV Q+TM GSP NGVAERRNRTL++M RSM+S + LP+ LWGEA+KT
Sbjct: 582 GIVPQYTMPGSPSMNGVAERRNRTLKDMVRSMISHSTLPESLWGEALKT 630
>CAN81793.1 hypothetical protein VITISV_020571 [Vitis vinifera]
Length = 1193
Score = 147 bits (372), Expect = 5e-39
Identities = 73/111 (65%), Positives = 90/111 (81%), Gaps = 1/111 (0%)
Frame = +3
Query: 3 LIKEKSEALDKFKIFKTEVEKQLGKIIKIVRSDQGGEYYGKHGVSGQIK-GPFARYLEDC 179
LI EKS++LD FK FK EVE QL K IK VRSD+GGEYYG++ SG+ + GPFA+YL +C
Sbjct: 393 LINEKSQSLDVFKNFKAEVENQLSKKIKAVRSDRGGEYYGRYDGSGEQRPGPFAKYLMEC 452
Query: 180 GIVSQFTMLGSPEQNGVAERRNRTLQEMTRSMMSRTNLPDYLWGEAIKTTL 332
GIV Q+TM G+P QNGVAERRNRTL++M RSM+S + LP+ LWGEAIKT +
Sbjct: 453 GIVPQYTMPGTPSQNGVAERRNRTLKDMVRSMISHSTLPESLWGEAIKTAV 503
>CAN78154.1 hypothetical protein VITISV_032622 [Vitis vinifera]
Length = 1250
Score = 147 bits (372), Expect = 5e-39
Identities = 73/109 (66%), Positives = 89/109 (81%), Gaps = 1/109 (0%)
Frame = +3
Query: 3 LIKEKSEALDKFKIFKTEVEKQLGKIIKIVRSDQGGEYYGKHGVSGQIK-GPFARYLEDC 179
LI EKS++LD FK FK EVE QL K IK VRSD+GGEYYG++ SG+ + GPFA+YLE+C
Sbjct: 403 LIHEKSQSLDVFKTFKAEVELQLNKRIKSVRSDRGGEYYGRYDGSGEQRPGPFAKYLEEC 462
Query: 180 GIVSQFTMLGSPEQNGVAERRNRTLQEMTRSMMSRTNLPDYLWGEAIKT 326
GIV Q+TM GSP NGVAERRNRTL++M RSM+S + LP+ LWGEA+KT
Sbjct: 463 GIVPQYTMPGSPSMNGVAERRNRTLKDMVRSMISHSTLPEKLWGEALKT 511
>CAN67821.1 hypothetical protein VITISV_025855, partial [Vitis vinifera]
Length = 1356
Score = 147 bits (372), Expect = 5e-39
Identities = 73/109 (66%), Positives = 89/109 (81%), Gaps = 1/109 (0%)
Frame = +3
Query: 3 LIKEKSEALDKFKIFKTEVEKQLGKIIKIVRSDQGGEYYGKHGVSGQIK-GPFARYLEDC 179
LI EKS++LD FK FK EVE QL K IK VRSD+GGEYYG++ SG+ + GPFA+YLE+C
Sbjct: 527 LIHEKSQSLDVFKTFKAEVELQLNKRIKSVRSDRGGEYYGRYDGSGEQRPGPFAKYLEEC 586
Query: 180 GIVSQFTMLGSPEQNGVAERRNRTLQEMTRSMMSRTNLPDYLWGEAIKT 326
GIV Q+TM GSP NGVAERRNRTL++M RSM+S + LP+ LWGEA+KT
Sbjct: 587 GIVPQYTMPGSPSMNGVAERRNRTLKDMVRSMISHSTLPEKLWGEALKT 635
>CAN83623.1 hypothetical protein VITISV_010870 [Vitis vinifera]
Length = 1601
Score = 147 bits (372), Expect = 5e-39
Identities = 73/109 (66%), Positives = 89/109 (81%), Gaps = 1/109 (0%)
Frame = +3
Query: 3 LIKEKSEALDKFKIFKTEVEKQLGKIIKIVRSDQGGEYYGKHGVSGQIK-GPFARYLEDC 179
LI EKS++LD FK FK EVE QL K IK VRSD+GGEYYG++ SG+ + GPFA+YLE+C
Sbjct: 838 LIHEKSQSLDVFKTFKAEVELQLNKRIKSVRSDRGGEYYGRYDGSGEQRPGPFAKYLEEC 897
Query: 180 GIVSQFTMLGSPEQNGVAERRNRTLQEMTRSMMSRTNLPDYLWGEAIKT 326
GIV Q+TM GSP NGVAERRNRTL++M RSM+S + LP+ LWGEA+KT
Sbjct: 898 GIVPQYTMPGSPSMNGVAERRNRTLKDMVRSMISHSTLPEKLWGEALKT 946
>EMT12132.1 Eukaryotic translation initiation factor 3 subunit A [Aegilops
tauschii]
Length = 2007
Score = 147 bits (371), Expect = 7e-39
Identities = 71/107 (66%), Positives = 88/107 (82%)
Frame = +3
Query: 12 EKSEALDKFKIFKTEVEKQLGKIIKIVRSDQGGEYYGKHGVSGQIKGPFARYLEDCGIVS 191
E+SEALDKFKIFK EVE Q K IKI+RSD+GGEYYG+H GQ+ GPFA++L++ GIV+
Sbjct: 645 ERSEALDKFKIFKDEVENQHDKRIKILRSDRGGEYYGRHTPYGQVPGPFAKFLQETGIVA 704
Query: 192 QFTMLGSPEQNGVAERRNRTLQEMTRSMMSRTNLPDYLWGEAIKTTL 332
Q++M G P+QNGVAERRNRTL +M RSMMS +NLP LW EA+KT +
Sbjct: 705 QYSMPGEPQQNGVAERRNRTLMDMVRSMMSYSNLPLGLWMEALKTAI 751
>CBI20118.3 unnamed protein product, partial [Vitis vinifera]
Length = 1354
Score = 146 bits (369), Expect = 1e-38
Identities = 72/110 (65%), Positives = 91/110 (82%)
Frame = +3
Query: 3 LIKEKSEALDKFKIFKTEVEKQLGKIIKIVRSDQGGEYYGKHGVSGQIKGPFARYLEDCG 182
L+ EKS+A+D F++F TEVE+QL K IKIVRSDQGGEYYG++ SGQ GPFA++LE G
Sbjct: 899 LMHEKSQAIDIFEMFITEVERQLDKKIKIVRSDQGGEYYGRYDESGQNPGPFAKFLEKHG 958
Query: 183 IVSQFTMLGSPEQNGVAERRNRTLQEMTRSMMSRTNLPDYLWGEAIKTTL 332
I +Q+TM G+P+QNGVAERRNRTL EM RSMMS +++P LWGEA+KT +
Sbjct: 959 IRAQYTMPGTPQQNGVAERRNRTLMEMVRSMMSYSSVPISLWGEALKTAM 1008
>ABA95205.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1407
Score = 146 bits (368), Expect = 2e-38
Identities = 71/107 (66%), Positives = 86/107 (80%)
Frame = +3
Query: 6 IKEKSEALDKFKIFKTEVEKQLGKIIKIVRSDQGGEYYGKHGVSGQIKGPFARYLEDCGI 185
IKE+SEALDKFKIFK EVE Q + IKIVRSD+GGEYYG+H GQI GPFAR+L++ GI
Sbjct: 561 IKERSEALDKFKIFKAEVENQHDRKIKIVRSDRGGEYYGRHTTYGQIPGPFARFLQESGI 620
Query: 186 VSQFTMLGSPEQNGVAERRNRTLQEMTRSMMSRTNLPDYLWGEAIKT 326
+Q++ G P+QNGVAERRNRTL +M RSM+S + LP LW EA+KT
Sbjct: 621 KAQYSAPGEPQQNGVAERRNRTLMDMVRSMLSHSTLPVKLWMEALKT 667
>CDF77009.1 hypothetical transposable element-related protein, partial
[Boechera divaricarpa]
Length = 1350
Score = 145 bits (365), Expect = 4e-38
Identities = 71/109 (65%), Positives = 88/109 (80%), Gaps = 1/109 (0%)
Frame = +3
Query: 3 LIKEKSEALDKFKIFKTEVEKQLGKIIKIVRSDQGGEYYGKHGVSGQIK-GPFARYLEDC 179
LI EKSE+LD F+ FK EVE QL + IK VRSD+GGEYYG++ SG+ + GPFA+YLE+C
Sbjct: 526 LIHEKSESLDVFRKFKAEVENQLERKIKFVRSDRGGEYYGRYDGSGEQRPGPFAKYLEEC 585
Query: 180 GIVSQFTMLGSPEQNGVAERRNRTLQEMTRSMMSRTNLPDYLWGEAIKT 326
GIV Q+TM GSP NGV+ERRNRTL++M RSM+ + LPD LWGEA+KT
Sbjct: 586 GIVPQYTMPGSPSMNGVSERRNRTLKDMVRSMICHSTLPDSLWGEALKT 634
>CAN81238.1 hypothetical protein VITISV_031073 [Vitis vinifera]
Length = 1354
Score = 145 bits (365), Expect = 4e-38
Identities = 73/109 (66%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
Frame = +3
Query: 3 LIKEKSEALDKFKIFKTEVEKQLGKIIKIVRSDQGGEYYGKHGVSG-QIKGPFARYLEDC 179
LI EKS++LD FK FK EVE QL K IK VRSD+GGEYYG++ SG Q GPFA+YLE+C
Sbjct: 572 LIHEKSQSLDVFKTFKXEVELQLNKRIKSVRSDRGGEYYGRYDGSGEQHPGPFAKYLEEC 631
Query: 180 GIVSQFTMLGSPEQNGVAERRNRTLQEMTRSMMSRTNLPDYLWGEAIKT 326
GIV Q+TM GSP NGVAERRNR L++M RSM+S + LP+ LWGEA+KT
Sbjct: 632 GIVPQYTMPGSPSMNGVAERRNRILKDMVRSMISHSTLPEKLWGEALKT 680
>ABF94883.1 transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 1390
Score = 144 bits (364), Expect = 6e-38
Identities = 71/109 (65%), Positives = 87/109 (79%)
Frame = +3
Query: 6 IKEKSEALDKFKIFKTEVEKQLGKIIKIVRSDQGGEYYGKHGVSGQIKGPFARYLEDCGI 185
IKE+SEA+DKFKIFK EVE QL IK+VRSD+GGEYYG+H GQ+ GPFAR+L + GI
Sbjct: 547 IKERSEAMDKFKIFKAEVENQLDIKIKVVRSDRGGEYYGRHTPYGQVPGPFARFLLENGI 606
Query: 186 VSQFTMLGSPEQNGVAERRNRTLQEMTRSMMSRTNLPDYLWGEAIKTTL 332
V+Q++ G P+QNGVAERRNRTL +M RSMMS + LP LW EA+KT +
Sbjct: 607 VAQYSTPGEPQQNGVAERRNRTLMDMVRSMMSYSTLPLGLWMEALKTAI 655
>CAN62045.1 hypothetical protein VITISV_040357 [Vitis vinifera]
Length = 1290
Score = 143 bits (361), Expect = 2e-37
Identities = 71/111 (63%), Positives = 89/111 (80%), Gaps = 1/111 (0%)
Frame = +3
Query: 3 LIKEKSEALDKFKIFKTEVEKQLGKIIKIVRSDQGGEYYGKHGVSGQIK-GPFARYLEDC 179
LI EKS++LD FK FK EVE QL K IK VRSD+GGEYYG++ SG+ + GPFA+YL +C
Sbjct: 464 LIHEKSQSLDVFKNFKAEVENQLSKKIKAVRSDRGGEYYGRYDGSGEQRPGPFAKYLMEC 523
Query: 180 GIVSQFTMLGSPEQNGVAERRNRTLQEMTRSMMSRTNLPDYLWGEAIKTTL 332
GIV Q+TM G+P QNGVAERR+ TL++M RSM+S + LP+ LWGEAIKT +
Sbjct: 524 GIVPQYTMPGTPSQNGVAERRSHTLKDMVRSMISHSTLPESLWGEAIKTAV 574
>KYP52774.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 835
Score = 143 bits (360), Expect = 2e-37
Identities = 70/111 (63%), Positives = 89/111 (80%), Gaps = 1/111 (0%)
Frame = +3
Query: 3 LIKEKSEALDKFKIFKTEVEKQLGKIIKIVRSDQGGEYYGKHGVSGQIK-GPFARYLEDC 179
LI EKS++LD FK FK EVE QLGK IK V+SD+GGEYYG++ SG+ + GPFA +L +C
Sbjct: 374 LIHEKSQSLDVFKSFKAEVELQLGKKIKAVKSDRGGEYYGRYDGSGEQRPGPFALFLREC 433
Query: 180 GIVSQFTMLGSPEQNGVAERRNRTLQEMTRSMMSRTNLPDYLWGEAIKTTL 332
GIV Q+TM G P NGVAERRNRTL++M RSM+S ++LP+ LWGEA+KT +
Sbjct: 434 GIVPQYTMPGKPSMNGVAERRNRTLKDMVRSMISHSSLPESLWGEALKTAV 484
>KYP35727.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 935
Score = 143 bits (360), Expect = 2e-37
Identities = 70/111 (63%), Positives = 89/111 (80%), Gaps = 1/111 (0%)
Frame = +3
Query: 3 LIKEKSEALDKFKIFKTEVEKQLGKIIKIVRSDQGGEYYGKHGVSGQIK-GPFARYLEDC 179
LI EKS++LD FK FK EVE QLGK IK V+SD+GGEYYG++ SG+ + GPFA +L +C
Sbjct: 502 LIHEKSQSLDVFKSFKAEVELQLGKKIKAVKSDRGGEYYGRYDGSGEQRPGPFALFLREC 561
Query: 180 GIVSQFTMLGSPEQNGVAERRNRTLQEMTRSMMSRTNLPDYLWGEAIKTTL 332
GIV Q+TM G P NGVAERRNRTL++M RSM+S ++LP+ LWGEA+KT +
Sbjct: 562 GIVPQYTMPGKPSMNGVAERRNRTLKDMVRSMISHSSLPESLWGEALKTAV 612
>AAD12998.1 pol polyprotein [Zea mays]
Length = 998
Score = 143 bits (360), Expect = 2e-37
Identities = 71/109 (65%), Positives = 86/109 (78%)
Frame = +3
Query: 6 IKEKSEALDKFKIFKTEVEKQLGKIIKIVRSDQGGEYYGKHGVSGQIKGPFARYLEDCGI 185
IKE+SEALDKFK FK EVE Q IKIVRSD+GGEYYG+H GQ+ GPFAR+L + GI
Sbjct: 133 IKERSEALDKFKQFKAEVENQHDLKIKIVRSDRGGEYYGRHTEYGQVPGPFARFLRENGI 192
Query: 186 VSQFTMLGSPEQNGVAERRNRTLQEMTRSMMSRTNLPDYLWGEAIKTTL 332
V+Q++ G P+QNGVAERRNRTL +M RSM+S +NLP LW EA+KT +
Sbjct: 193 VAQYSTPGEPQQNGVAERRNRTLMDMVRSMLSYSNLPLGLWMEALKTAM 241
>CAN61066.1 hypothetical protein VITISV_004412 [Vitis vinifera]
Length = 1054
Score = 143 bits (360), Expect = 2e-37
Identities = 74/110 (67%), Positives = 88/110 (80%), Gaps = 2/110 (1%)
Frame = +3
Query: 3 LIKEKSEALDKFKIFKTEVEKQLGKIIKIV-RSDQGGEYYGKHGVSG-QIKGPFARYLED 176
LI EKS++LD FK FK EVE QL K IK V RSD+GGEYYG++ SG Q GPFA+YLE+
Sbjct: 390 LIHEKSQSLDVFKTFKAEVELQLNKRIKSVGRSDRGGEYYGRYDGSGEQHPGPFAKYLEE 449
Query: 177 CGIVSQFTMLGSPEQNGVAERRNRTLQEMTRSMMSRTNLPDYLWGEAIKT 326
CGIV Q+TM GSP NGVAERRNRTL++M RSM+S + LP+ LWGEA+KT
Sbjct: 450 CGIVPQYTMPGSPSMNGVAERRNRTLKDMVRSMISHSTLPEKLWGEALKT 499