BLASTX nr result
ID: Phellodendron21_contig00041297
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00041297
(399 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006401947.1 hypothetical protein EUTSA_v10015949mg, partial [... 69 3e-23
YP_009242008.1 NADH dehydrogenase subunit 4 (mitochondrion) [Ory... 91 8e-19
YP_009242020.1 NADH dehydrogenase subunit 4 (mitochondrion) [Ory... 91 2e-18
AGC78957.1 hypothetical protein (mitochondrion) [Vicia faba] 82 1e-17
KQK85790.1 hypothetical protein SETIT_020751mg [Setaria italica] 81 3e-16
XP_013442821.1 hypothetical protein MTR_0082s0050 [Medicago trun... 61 3e-14
CDM82313.1 unnamed protein product [Triticum aestivum] 57 7e-13
CDY45481.1 BnaCnng12400D [Brassica napus] 51 9e-12
CDY67690.1 BnaUnng02370D [Brassica napus] 50 2e-11
CDM81530.1 unnamed protein product [Triticum aestivum] 53 8e-11
CDM87129.1 unnamed protein product [Triticum aestivum] 50 1e-09
JAT40867.1 NADH-ubiquinone oxidoreductase chain 4, partial [Anth... 62 2e-09
P93313.2 RecName: Full=NADH-ubiquinone oxidoreductase chain 4; A... 63 5e-09
YP_717159.1 NADH dehydrogenase subunit 4 [Brassica napus] BAC989... 63 5e-09
ACH78246.1 NADH dehydrogenase subunit 4 (mitochondrion) [Arabido... 63 5e-09
AHC94295.1 NADH dehydrogenase subunit 4, partial (mitochondrion)... 63 5e-09
AFK49226.1 unknown [Lotus japonicus] 60 7e-09
YP_003587245.1 NADH dehydrogenase subunit 4 [Citrullus lanatus] ... 62 9e-09
BAO45887.1 NADH dehydrogenase [Acacia mangium] 62 1e-08
YP_009270691.1 NADH dehydrogenase subunit 4 (mitochondrion) [Nel... 62 1e-08
>XP_006401947.1 hypothetical protein EUTSA_v10015949mg, partial [Eutrema
salsugineum] ESQ43400.1 hypothetical protein
EUTSA_v10015949mg, partial [Eutrema salsugineum]
Length = 251
Score = 68.6 bits (166), Expect(2) = 3e-23
Identities = 40/67 (59%), Positives = 43/67 (64%), Gaps = 7/67 (10%)
Frame = +3
Query: 9 HQIFEKGPSP-------PKSAYVIGNSWLETILMVLISGRNNKKKSPGWLVSLVIGDYLA 167
HQI + PS P + NSWLETILMVLISGRNNK +SPG LVSLVIGDYLA
Sbjct: 154 HQIRDWAPSQRFDGMAYPIALMSYENSWLETILMVLISGRNNKNQSPGRLVSLVIGDYLA 213
Query: 168 WFGEHLL 188
LL
Sbjct: 214 CLNAELL 220
Score = 67.0 bits (162), Expect(2) = 3e-23
Identities = 33/37 (89%), Positives = 34/37 (91%)
Frame = +2
Query: 224 LNAELLTLLVWMGVYPKVFLDRMHTSVSNLVQHGKFH 334
LNAELLTLLV MGV+PKVF D MHTSVSNLVQHGKFH
Sbjct: 215 LNAELLTLLVRMGVHPKVFPDCMHTSVSNLVQHGKFH 251
>YP_009242008.1 NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
AMQ23370.1 NADH dehydrogenase subunit 4 (mitochondrion)
[Oryza minuta]
Length = 2992
Score = 91.3 bits (225), Expect = 8e-19
Identities = 56/117 (47%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Frame = +1
Query: 1 GHSIKSLRRGPAHPRALMS*GTHGWKQSLWF*YPVGIIRRKVQVGW*A***ETI*LGS-- 174
GHS R L GT GWKQSLWF YPV IIR+ + GW ++ +G
Sbjct: 2881 GHSKTWRMRAHPTQERLCHMGTLGWKQSLWFSYPVSIIRKNLSPGWLV----SLVIGDYL 2936
Query: 175 ----ESTCWVKYFFCC*MLRPKC*TIDSTCLDGCLPQSVPGPHAYIRK*LSATWQIS 333
E ++ FC ML P C TI TC DGC PQSVPG HAYIR L ATWQIS
Sbjct: 2937 AWFGEHLLGLRLVFCL-MLWPLCSTIHPTCSDGCSPQSVPGLHAYIRYLLCATWQIS 2992
>YP_009242020.1 NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
AMQ23374.1 NADH dehydrogenase subunit 4 (mitochondrion)
[Oryza minuta]
Length = 2992
Score = 90.5 bits (223), Expect = 2e-18
Identities = 56/117 (47%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Frame = +1
Query: 1 GHSIKSLRRGPAHPRALMS*GTHGWKQSLWF*YPVGIIRRKVQVGW*A***ETI*LGS-- 174
GHS R L GT GWKQSLWF YPV IIR+ + GW ++ +G
Sbjct: 2881 GHSKTWRMRAHPTQERLCHMGTLGWKQSLWFSYPVTIIRKNLSPGWLV----SLVIGDYL 2936
Query: 175 ----ESTCWVKYFFCC*MLRPKC*TIDSTCLDGCLPQSVPGPHAYIRK*LSATWQIS 333
E ++ FC ML P C TI TC DGC PQSVPG HAYIR L ATWQIS
Sbjct: 2937 AWFGEHLLGLRLVFCL-MLWPLCSTIHPTCSDGCSPQSVPGLHAYIRLLLCATWQIS 2992
>AGC78957.1 hypothetical protein (mitochondrion) [Vicia faba]
Length = 106
Score = 81.6 bits (200), Expect = 1e-17
Identities = 38/63 (60%), Positives = 47/63 (74%)
Frame = +3
Query: 3 PFHQIFEKGPSPPKSAYVIGNSWLETILMVLISGRNNKKKSPGWLVSLVIGDYLAWFGEH 182
P + F + P+ + + + W ++ LMVLISGRNN+ KSPGWLVSLVIGDYLAWFGEH
Sbjct: 44 PLLKDFMEWPTQERLCNMGTHGWKQSFLMVLISGRNNQNKSPGWLVSLVIGDYLAWFGEH 103
Query: 183 LLG 191
LLG
Sbjct: 104 LLG 106
>KQK85790.1 hypothetical protein SETIT_020751mg [Setaria italica]
Length = 210
Score = 80.9 bits (198), Expect = 3e-16
Identities = 39/44 (88%), Positives = 40/44 (90%)
Frame = +2
Query: 203 FVAKCYGLNAELLTLLVWMGVYPKVFLDRMHTSVSNLVQHGKFH 334
F AKCYGLNAELLTLLV MGV+PKVF D MHTSVSNLVQHGKFH
Sbjct: 167 FFAKCYGLNAELLTLLVRMGVHPKVFPDCMHTSVSNLVQHGKFH 210
>XP_013442821.1 hypothetical protein MTR_0082s0050 [Medicago truncatula] KEH16846.1
hypothetical protein MTR_0082s0050 [Medicago truncatula]
Length = 334
Score = 61.2 bits (147), Expect(2) = 3e-14
Identities = 34/53 (64%), Positives = 35/53 (66%)
Frame = +3
Query: 30 PSPPKSAYVIGNSWLETILMVLISGRNNKKKSPGWLVSLVIGDYLAWFGEHLL 188
PSPPKSAYVI LM +SPGWLVSLVIGDYLAWFGEHLL
Sbjct: 277 PSPPKSAYVIWE------LM---------NQSPGWLVSLVIGDYLAWFGEHLL 314
Score = 44.3 bits (103), Expect(2) = 3e-14
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = +2
Query: 248 LVWMGVYPKVFLDRMHTSVSNLVQHGKFH 334
L W G + VF DRMHT VSNLVQHGKF+
Sbjct: 306 LAWFGEHLLVFPDRMHTYVSNLVQHGKFN 334
>CDM82313.1 unnamed protein product [Triticum aestivum]
Length = 64
Score = 56.6 bits (135), Expect(2) = 7e-13
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +3
Query: 114 KKKSPGWLVSLVIGDYLAWFGEHLLG 191
K +SPGWLVSLVIGDYLAWFGEHLLG
Sbjct: 33 KNQSPGWLVSLVIGDYLAWFGEHLLG 58
Score = 44.3 bits (103), Expect(2) = 7e-13
Identities = 22/37 (59%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 34 AHP--RALMS*GTHGWKQSLWF*YPVGIIRRKVQVGW 138
AHP L GT GWKQSLWF YPV IIR+ GW
Sbjct: 3 AHPTQERLCHMGTLGWKQSLWFLYPVRIIRKNQSPGW 39
>CDY45481.1 BnaCnng12400D [Brassica napus]
Length = 292
Score = 50.8 bits (120), Expect(2) = 9e-12
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +3
Query: 27 GPSPPKSAYVIGNSWLETILMVLISGRNNKKKSPGWL 137
G + P + GNSWLETILMVLISGRNNK +SPG L
Sbjct: 69 GMAHPIALMSYGNSWLETILMVLISGRNNKNQSPGSL 105
Score = 46.2 bits (108), Expect(2) = 9e-12
Identities = 24/30 (80%), Positives = 25/30 (83%)
Frame = +2
Query: 224 LNAELLTLLVWMGVYPKVFLDRMHTSVSNL 313
LNAELLTLLV MGV+PKVF D MHTSV L
Sbjct: 105 LNAELLTLLVRMGVHPKVFPDCMHTSVLGL 134
>CDY67690.1 BnaUnng02370D [Brassica napus]
Length = 354
Score = 49.7 bits (117), Expect(2) = 2e-11
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +3
Query: 60 GNSWLETILMVLISGRNNKKKSPGWL 137
GNSWLETILMVLISGRNNK +SPG L
Sbjct: 166 GNSWLETILMVLISGRNNKNQSPGSL 191
Score = 46.2 bits (108), Expect(2) = 2e-11
Identities = 24/30 (80%), Positives = 25/30 (83%)
Frame = +2
Query: 224 LNAELLTLLVWMGVYPKVFLDRMHTSVSNL 313
LNAELLTLLV MGV+PKVF D MHTSV L
Sbjct: 191 LNAELLTLLVRMGVHPKVFPDCMHTSVLGL 220
>CDM81530.1 unnamed protein product [Triticum aestivum]
Length = 64
Score = 53.1 bits (126), Expect(2) = 8e-11
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +3
Query: 114 KKKSPGWLVSLVIGDYLAWFGEHLLG 191
K +SP WLVSLVIGDYLAWFGEHLLG
Sbjct: 33 KNQSPCWLVSLVIGDYLAWFGEHLLG 58
Score = 40.8 bits (94), Expect(2) = 8e-11
Identities = 21/37 (56%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 34 AHP--RALMS*GTHGWKQSLWF*YPVGIIRRKVQVGW 138
AHP L GT GWKQSLWF YPV IIR+ W
Sbjct: 3 AHPTQERLCHMGTLGWKQSLWFLYPVRIIRKNQSPCW 39
>CDM87129.1 unnamed protein product [Triticum aestivum]
Length = 52
Score = 50.4 bits (119), Expect(2) = 1e-09
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +3
Query: 114 KKKSPGWLVSLVIGDYLAWFGEHLLG 191
K +SP WLVSLVIG YLAWFGEHLLG
Sbjct: 21 KNQSPCWLVSLVIGHYLAWFGEHLLG 46
Score = 39.7 bits (91), Expect(2) = 1e-09
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +1
Query: 61 GTHGWKQSLWF*YPVGIIRRKVQVGW 138
GT GWKQSLWF YPV IIR+ W
Sbjct: 2 GTLGWKQSLWFLYPVRIIRKNQSPCW 27
>JAT40867.1 NADH-ubiquinone oxidoreductase chain 4, partial [Anthurium
amnicola]
Length = 177
Score = 62.0 bits (149), Expect = 2e-09
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +2
Query: 248 LVWMGVYPKVFLDRMHTSVSNLVQHGKFH 334
+VWMGVYPKVFLD MHTSVSNLVQHGKFH
Sbjct: 149 VVWMGVYPKVFLDCMHTSVSNLVQHGKFH 177
>P93313.2 RecName: Full=NADH-ubiquinone oxidoreductase chain 4; AltName:
Full=NADH dehydrogenase subunit 4
Length = 495
Score = 63.2 bits (152), Expect = 5e-09
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +2
Query: 248 LVWMGVYPKVFLDRMHTSVSNLVQHGKFH 334
LVWMGVYPKVFLD MHTSVSNLVQHGKFH
Sbjct: 467 LVWMGVYPKVFLDCMHTSVSNLVQHGKFH 495
>YP_717159.1 NADH dehydrogenase subunit 4 [Brassica napus] BAC98908.1 NADH
dehydrogenase subunit 4 (mitochondrion) [Brassica napus]
Length = 495
Score = 63.2 bits (152), Expect = 5e-09
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +2
Query: 248 LVWMGVYPKVFLDRMHTSVSNLVQHGKFH 334
LVWMGVYPKVFLD MHTSVSNLVQHGKFH
Sbjct: 467 LVWMGVYPKVFLDCMHTSVSNLVQHGKFH 495
>ACH78246.1 NADH dehydrogenase subunit 4 (mitochondrion) [Arabidopsis thaliana]
Length = 495
Score = 63.2 bits (152), Expect = 5e-09
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +2
Query: 248 LVWMGVYPKVFLDRMHTSVSNLVQHGKFH 334
LVWMGVYPKVFLD MHTSVSNLVQHGKFH
Sbjct: 467 LVWMGVYPKVFLDCMHTSVSNLVQHGKFH 495
>AHC94295.1 NADH dehydrogenase subunit 4, partial (mitochondrion) [Amborella
trichopoda]
Length = 495
Score = 63.2 bits (152), Expect = 5e-09
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +2
Query: 248 LVWMGVYPKVFLDRMHTSVSNLVQHGKFH 334
LVWMGVYPKVFLD MHTSVSNLVQHGKFH
Sbjct: 467 LVWMGVYPKVFLDCMHTSVSNLVQHGKFH 495
>AFK49226.1 unknown [Lotus japonicus]
Length = 122
Score = 59.7 bits (143), Expect = 7e-09
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +2
Query: 248 LVWMGVYPKVFLDRMHTSVSNLVQHGKFH 334
+VWMGVYPKVFLD MHT VSNLVQHGKFH
Sbjct: 94 VVWMGVYPKVFLDCMHTYVSNLVQHGKFH 122
>YP_003587245.1 NADH dehydrogenase subunit 4 [Citrullus lanatus] ACV96638.1 NADH
dehydrogenase subunit 4 (mitochondrion) [Citrullus
lanatus]
Length = 495
Score = 62.4 bits (150), Expect = 9e-09
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +2
Query: 248 LVWMGVYPKVFLDRMHTSVSNLVQHGKFH 334
+VWMGVYPKVFLD MHTSVSNLVQHGKFH
Sbjct: 467 VVWMGVYPKVFLDYMHTSVSNLVQHGKFH 495
>BAO45887.1 NADH dehydrogenase [Acacia mangium]
Length = 385
Score = 62.0 bits (149), Expect = 1e-08
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +2
Query: 248 LVWMGVYPKVFLDRMHTSVSNLVQHGKFH 334
+VWMGVYPKVFLD MHTSVSNLVQHGKFH
Sbjct: 356 VVWMGVYPKVFLDCMHTSVSNLVQHGKFH 384
>YP_009270691.1 NADH dehydrogenase subunit 4 (mitochondrion) [Nelumbo nucifera]
ALL55144.1 NADH dehydrogenase subunit 4 (mitochondrion)
[Nelumbo nucifera]
Length = 495
Score = 62.0 bits (149), Expect = 1e-08
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +2
Query: 248 LVWMGVYPKVFLDRMHTSVSNLVQHGKFH 334
+VWMGVYPKVFLD MHTSVSNLVQHGKFH
Sbjct: 467 VVWMGVYPKVFLDCMHTSVSNLVQHGKFH 495