BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00041155
         (276 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KHN13665.1 Retrovirus-related Pol polyprotein from transposon TN...    66   8e-11
CAN67309.1 hypothetical protein VITISV_028165 [Vitis vinifera]         64   4e-10
KYP61706.1 Retrovirus-related Pol polyprotein from transposon TN...    62   2e-09
KHN13198.1 Retrovirus-related Pol polyprotein from transposon TN...    61   5e-09
KHN13199.1 Retrovirus-related Pol polyprotein from transposon TN...    61   5e-09
CAN70013.1 hypothetical protein VITISV_017116 [Vitis vinifera]         61   8e-09
CAN84102.1 hypothetical protein VITISV_041248 [Vitis vinifera]         59   4e-08
OAE23382.1 hypothetical protein AXG93_1660s1410 [Marchantia poly...    59   5e-08
CAN75921.1 hypothetical protein VITISV_030750 [Vitis vinifera]         58   9e-08
AAD19773.1 putative retroelement pol polyprotein [Arabidopsis th...    57   2e-07
KYP36396.1 Retrovirus-related Pol polyprotein from transposon TN...    55   6e-07
KYP64673.1 Retrovirus-related Pol polyprotein from transposon TN...    55   6e-07
KYP65226.1 Retrovirus-related Pol polyprotein from transposon TN...    55   1e-06
AAR13295.1 retrovirus-related pol polyprotein, partial [Phaseolu...    54   2e-06
CDN96898.1 putative Ty-1 copia retrotransposon [Phaseolus vulgaris]    54   2e-06
AER13159.1 putative Ty-1 copia retrotransposon [Phaseolus vulgaris]    54   3e-06
KZV56298.1 hypothetical protein F511_00295 [Dorcoceras hygrometr...    54   3e-06

>KHN13665.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 337

 Score = 66.2 bits (160), Expect = 8e-11
 Identities = 32/90 (35%), Positives = 49/90 (54%)
 Frame = +2

Query: 5   NNNKCFHCRKEDYFKKNFYKYLREHXXXXXXXXXXXXXXXXTCLTEVLIVSKK*MSKEWI 184
           N   C++C+KE +F+K   +  +++                    EVL +S K  S+EWI
Sbjct: 223 NEKACYYCKKEGHFRKECPERKKKNNGKYNDESDIAVVADGYESAEVLSISTKKHSEEWI 282

Query: 185 LDSGCSFHISPYREWFENFRTINQWTVYMG 274
           LDSGCSFH++P  EWF +++ I+   V MG
Sbjct: 283 LDSGCSFHMTPNLEWFSSYKEIDGGKVLMG 312


>CAN67309.1 hypothetical protein VITISV_028165 [Vitis vinifera]
          Length = 344

 Score = 64.3 bits (155), Expect = 4e-10
 Identities = 32/89 (35%), Positives = 45/89 (50%)
 Frame = +2

Query: 8   NNKCFHCRKEDYFKKNFYKYLREHXXXXXXXXXXXXXXXXTCLTEVLIVSKK*MSKEWIL 187
           NNKCF C+KE ++ KN      +                 +  T+VL+V       EWIL
Sbjct: 178 NNKCFKCKKEGHYVKNXPDRKGKENKRNYNSGDATFAKENSNTTDVLLVXVTNSDDEWIL 237

Query: 188 DSGCSFHISPYREWFENFRTINQWTVYMG 274
           DSGCS+H+SP  +WF  ++ I+   V MG
Sbjct: 238 DSGCSYHMSPNGDWFSTYQPIDGGKVLMG 266


>KYP61706.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 295

 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 34/89 (38%), Positives = 47/89 (52%)
 Frame = +2

Query: 8   NNKCFHCRKEDYFKKNFYKYLREHXXXXXXXXXXXXXXXXTCLTEVLIVSKK*MSKEWIL 187
           N +CF C KE +FKK+     RE                     EVL V+ +   KEWIL
Sbjct: 116 NKRCFICDKEGHFKKDCPN--RES-------------------AEVLAVTDQDTHKEWIL 154

Query: 188 DSGCSFHISPYREWFENFRTINQWTVYMG 274
           DSGCSFH++P ++WFE +  ++  TV +G
Sbjct: 155 DSGCSFHMTPNKDWFETYNQVDGGTVLLG 183


>KHN13198.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 341

 Score = 61.2 bits (147), Expect = 5e-09
 Identities = 31/90 (34%), Positives = 48/90 (53%)
 Frame = +2

Query: 5   NNNKCFHCRKEDYFKKNFYKYLREHXXXXXXXXXXXXXXXXTCLTEVLIVSKK*MSKEWI 184
           NNNKC +C+KE ++K+N  + L++                 +    VL VS      +WI
Sbjct: 223 NNNKCHNCQKEGHWKRNCPE-LKKDKVSTSEFGGAAVVSEESDGGNVLFVSSNVNDDDWI 281

Query: 185 LDSGCSFHISPYREWFENFRTINQWTVYMG 274
           LDS C+FH++P R+WF  F+ ++   V MG
Sbjct: 282 LDSACTFHMTPNRDWFATFQNVDGGKVLMG 311


>KHN13199.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 344

 Score = 61.2 bits (147), Expect = 5e-09
 Identities = 31/90 (34%), Positives = 48/90 (53%)
 Frame = +2

Query: 5   NNNKCFHCRKEDYFKKNFYKYLREHXXXXXXXXXXXXXXXXTCLTEVLIVSKK*MSKEWI 184
           NNNKC +C+KE ++K+N  + L++                 +    VL VS      +WI
Sbjct: 226 NNNKCHNCQKEGHWKRNCPE-LKKDKVSTSEFGGAAVVSEESDGGNVLFVSSNVNDDDWI 284

Query: 185 LDSGCSFHISPYREWFENFRTINQWTVYMG 274
           LDS C+FH++P R+WF  F+ ++   V MG
Sbjct: 285 LDSACTFHMTPNRDWFATFQNVDGGKVLMG 314


>CAN70013.1 hypothetical protein VITISV_017116 [Vitis vinifera]
          Length = 947

 Score = 60.8 bits (146), Expect = 8e-09
 Identities = 32/87 (36%), Positives = 43/87 (49%)
 Frame = +2

Query: 14  KCFHCRKEDYFKKNFYKYLREHXXXXXXXXXXXXXXXXTCLTEVLIVSKK*MSKEWILDS 193
           KCF C KE +FKK+     +                      +VL V++    KEWILDS
Sbjct: 270 KCFICHKEGHFKKDCSDKRQNTIKKTVNEGDAAVILDGYDSAKVLNVAEMDSGKEWILDS 329

Query: 194 GCSFHISPYREWFENFRTINQWTVYMG 274
           GCSFH+ P + WFE+F+  N   V +G
Sbjct: 330 GCSFHMCPIKAWFEDFKEANGGHVLLG 356


>CAN84102.1 hypothetical protein VITISV_041248 [Vitis vinifera]
          Length = 894

 Score = 58.9 bits (141), Expect = 4e-08
 Identities = 33/87 (37%), Positives = 43/87 (49%)
 Frame = +2

Query: 14  KCFHCRKEDYFKKNFYKYLREHXXXXXXXXXXXXXXXXTCLTEVLIVSKK*MSKEWILDS 193
           KCF C KE +FKK+     +                       VL V++    KEWILDS
Sbjct: 227 KCFICHKEGHFKKDCPDMRQNTXKKTMNEGDATMILDGYDNAGVLNVAEVDSGKEWILDS 286

Query: 194 GCSFHISPYREWFENFRTINQWTVYMG 274
           GCSFH+ P + WFE+F+  N   V +G
Sbjct: 287 GCSFHMCPIKAWFEDFKEANGGHVLLG 313


>OAE23382.1 hypothetical protein AXG93_1660s1410 [Marchantia polymorpha subsp.
           polymorpha]
          Length = 357

 Score = 58.5 bits (140), Expect = 5e-08
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
 Frame = +2

Query: 8   NNKCFHCRKEDYFKKNFYKYLRE----HXXXXXXXXXXXXXXXXTCLTEVLIVSKK*MSK 175
           + KCF+C K D+ KK+ Y ++++                         EVL+ S+K  + 
Sbjct: 109 DKKCFYCNKMDHLKKDCYSWIKKSKENQASISQGHQDSANFGDGYSDDEVLMASRKLKAS 168

Query: 176 EWILDSGCSFHISPYREWFENFRTINQWTVYM 271
           EWILDSGC++H++  + W  +++ +N+  V M
Sbjct: 169 EWILDSGCTYHMTHNKHWLSDYQELNEMKVLM 200


>CAN75921.1 hypothetical protein VITISV_030750 [Vitis vinifera]
          Length = 437

 Score = 57.8 bits (138), Expect = 9e-08
 Identities = 30/87 (34%), Positives = 42/87 (48%)
 Frame = +2

Query: 14  KCFHCRKEDYFKKNFYKYLREHXXXXXXXXXXXXXXXXTCLTEVLIVSKK*MSKEWILDS 193
           KCF C KE +F K+     +                      E+L +++    KEWILDS
Sbjct: 63  KCFICHKEGHFNKDCPNRRQNTVKKIVNEGDAVVILDGYDSAELLNMTEVDSGKEWILDS 122

Query: 194 GCSFHISPYREWFENFRTINQWTVYMG 274
           GCSFH+ P + WFENF+  +   V +G
Sbjct: 123 GCSFHMCPIKAWFENFKEADGGHVLLG 149


>AAD19773.1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1335

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
 Frame = +2

Query: 17  CFHCRKEDYFKKNFYKYLREHXXXXXXXXXXXXXXXXT-----------CLTEVLIVSKK 163
           C+ C KE +FKK  YK++  +                +              E L+V+  
Sbjct: 221 CWICGKEGHFKKQCYKWIERNKSKQQGSDNGESSLAKSTEAFNPAMVLLATDETLVVTDS 280

Query: 164 *MSKEWILDSGCSFHISPYREWFENFRTINQWTVYMG 274
            ++ EW+LD+GCSFH++P ++WF++F+ ++   V MG
Sbjct: 281 -IANEWVLDTGCSFHMTPRKDWFKDFKELSSGYVKMG 316


>KYP36396.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 485

 Score = 55.5 bits (132), Expect = 6e-07
 Identities = 27/87 (31%), Positives = 44/87 (50%)
 Frame = +2

Query: 14  KCFHCRKEDYFKKNFYKYLREHXXXXXXXXXXXXXXXXTCLTEVLIVSKK*MSKEWILDS 193
           KCF+C K  +FKKN  +  R+                     +VL+V+     K+W++DS
Sbjct: 178 KCFYCHKVGHFKKNCPERNRDQKSSADSADIAAISDGYES-ADVLVVTTSQTQKDWVMDS 236

Query: 194 GCSFHISPYREWFENFRTINQWTVYMG 274
           GCS+H+ P +++FE  +     TV +G
Sbjct: 237 GCSYHMCPKKDYFETLKLKEGGTVLLG 263


>KYP64673.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 780

 Score = 55.5 bits (132), Expect = 6e-07
 Identities = 27/87 (31%), Positives = 44/87 (50%)
 Frame = +2

Query: 14  KCFHCRKEDYFKKNFYKYLREHXXXXXXXXXXXXXXXXTCLTEVLIVSKK*MSKEWILDS 193
           KCF+C K  +FKKN  +  R+                     +VL+V+     K+W++DS
Sbjct: 232 KCFYCHKVGHFKKNCPERNRDQKSSADSADIAAISDGYES-ADVLVVTTSQTQKDWVMDS 290

Query: 194 GCSFHISPYREWFENFRTINQWTVYMG 274
           GCS+H+ P +++FE  +     TV +G
Sbjct: 291 GCSYHMCPKKDYFETLKLKEGGTVLLG 317


>KYP65226.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 689

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
 Frame = +2

Query: 14  KCFHCRKEDYFKKNFYKYL-----REHXXXXXXXXXXXXXXXXTCLTEVLIVSKK*MSKE 178
           +C+HC+KE + +K   + L     +E                 +   E L+VSK     E
Sbjct: 210 RCYHCKKEGHTRKVCPERLANGGNKEKGKYYVNVVIVQDEGYESA--EALVVSKDNSKLE 267

Query: 179 WILDSGCSFHISPYREWFENFRTINQWTVYMG 274
           WI+DSGCS+H++P R WFENF       V +G
Sbjct: 268 WIMDSGCSWHMTPRRSWFENFADQADGLVLLG 299


>AAR13295.1 retrovirus-related pol polyprotein, partial [Phaseolus vulgaris]
          Length = 324

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 24/88 (27%), Positives = 46/88 (52%)
 Frame = +2

Query: 11  NKCFHCRKEDYFKKNFYKYLREHXXXXXXXXXXXXXXXXTCLTEVLIVSKK*MSKEWILD 190
           ++C  C ++ ++KK+  K  ++                 + ++ ++ +S      EWILD
Sbjct: 208 DECAFCHEKGHWKKDCPKLQKKEKVPQDANVAECKSDVESDISLIVSLSASSYPDEWILD 267

Query: 191 SGCSFHISPYREWFENFRTINQWTVYMG 274
           SGC++H+ P R+WF  F+ ++   VYMG
Sbjct: 268 SGCTYHMCPIRDWFFEFQELDGGVVYMG 295


>CDN96898.1 putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 24/88 (27%), Positives = 46/88 (52%)
 Frame = +2

Query: 11  NKCFHCRKEDYFKKNFYKYLREHXXXXXXXXXXXXXXXXTCLTEVLIVSKK*MSKEWILD 190
           ++C  C ++ ++KK+  K  ++                 + ++ ++ +S      EWILD
Sbjct: 168 DECAFCHEKGHWKKDCPKLQKKEKVPQDANVAECKSDVESDISLIVSLSASSYPDEWILD 227

Query: 191 SGCSFHISPYREWFENFRTINQWTVYMG 274
           SGC++H+ P R+WF  F+ ++   VYMG
Sbjct: 228 SGCTYHMCPIRDWFFEFQELDGGVVYMG 255


>AER13159.1 putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 24/88 (27%), Positives = 46/88 (52%)
 Frame = +2

Query: 11  NKCFHCRKEDYFKKNFYKYLREHXXXXXXXXXXXXXXXXTCLTEVLIVSKK*MSKEWILD 190
           ++C  C ++ ++KK+  K  ++                 + ++ ++ +S      EWILD
Sbjct: 169 DECAFCHEKGHWKKDCPKLQKKEKVLQDANVAECKSDVESDISLIVSLSASLYLDEWILD 228

Query: 191 SGCSFHISPYREWFENFRTINQWTVYMG 274
           SGC++H+ P R+WF  F+ ++   VYMG
Sbjct: 229 SGCTYHMCPIRDWFFEFQELDGGVVYMG 256


>KZV56298.1 hypothetical protein F511_00295 [Dorcoceras hygrometricum]
          Length = 1309

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 26/75 (34%), Positives = 36/75 (48%)
 Frame = +2

Query: 14  KCFHCRKEDYFKKNFYKYLREHXXXXXXXXXXXXXXXXTCLTEVLIVSKK*MSKEWILDS 193
           KCF C KE +FKK+       +                    EVL+VS+      W++DS
Sbjct: 228 KCFVCHKEGHFKKDCPDRRARNPERRKDPGDAAVVSDGYESAEVLVVSRTNKQDCWVMDS 287

Query: 194 GCSFHISPYREWFEN 238
           GCSFH+ P + WF+N
Sbjct: 288 GCSFHMCPIKSWFQN 302