BLASTX nr result
ID: Phellodendron21_contig00041046
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00041046
(354 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_015388203.1 PREDICTED: pentatricopeptide repeat-containing pr... 149 9e-42
KDO68915.1 hypothetical protein CISIN_1g038109mg [Citrus sinensis] 147 4e-41
XP_006435776.1 hypothetical protein CICLE_v10033792mg [Citrus cl... 149 5e-40
XP_009345186.1 PREDICTED: pentatricopeptide repeat-containing pr... 123 7e-32
XP_008374207.1 PREDICTED: pentatricopeptide repeat-containing pr... 123 7e-32
XP_008233785.1 PREDICTED: pentatricopeptide repeat-containing pr... 120 1e-30
XP_002512332.1 PREDICTED: pentatricopeptide repeat-containing pr... 120 1e-29
XP_018806372.1 PREDICTED: pentatricopeptide repeat-containing pr... 113 7e-28
XP_012089117.1 PREDICTED: pentatricopeptide repeat-containing pr... 115 2e-27
XP_012089116.1 PREDICTED: pentatricopeptide repeat-containing pr... 115 2e-27
OAY42224.1 hypothetical protein MANES_09G163100 [Manihot esculenta] 114 2e-27
XP_015877440.1 PREDICTED: pentatricopeptide repeat-containing pr... 110 1e-26
XP_002311557.2 pentatricopeptide repeat-containing family protei... 105 8e-26
OMO50073.1 hypothetical protein CCACVL1_30661 [Corchorus capsula... 105 4e-25
OMP08494.1 hypothetical protein COLO4_06431 [Corchorus olitorius] 105 4e-25
XP_011024995.1 PREDICTED: pentatricopeptide repeat-containing pr... 102 6e-25
CAN73347.1 hypothetical protein VITISV_037919 [Vitis vinifera] 102 8e-24
XP_010034146.1 PREDICTED: pentatricopeptide repeat-containing pr... 102 1e-23
XP_017984693.1 PREDICTED: pentatricopeptide repeat-containing pr... 102 1e-23
EOY17722.1 Tetratricopeptide repeat-like superfamily protein, pu... 102 1e-23
>XP_015388203.1 PREDICTED: pentatricopeptide repeat-containing protein
At3g56030-like [Citrus sinensis]
Length = 324
Score = 149 bits (375), Expect = 9e-42
Identities = 78/117 (66%), Positives = 86/117 (73%)
Frame = +1
Query: 4 LRNKSLIPQSIITFNTRLLTNSSAFPDVPTTAYYDDLVNAAGRERDLETVRYLLNKRVRD 183
L K LIPQS++ TR T S AFPD PT+AYYDDLVNAAG ERDLETVRYLLNKR RD
Sbjct: 7 LPTKFLIPQSVLV--TRSFTKSGAFPDEPTSAYYDDLVNAAGHERDLETVRYLLNKRARD 64
Query: 184 SCXXXXXXXXXXXXXXXSLSILNDLYKTLARLDKGFPRKSAYDTLIARLCKITRIDE 354
C SLS+L+DL +TLARLDKGFPRKSAYDTLIARLCK+ +IDE
Sbjct: 65 CCFNTANTFNFITNTENSLSVLSDLCRTLARLDKGFPRKSAYDTLIARLCKLKKIDE 121
>KDO68915.1 hypothetical protein CISIN_1g038109mg [Citrus sinensis]
Length = 324
Score = 147 bits (371), Expect = 4e-41
Identities = 77/117 (65%), Positives = 85/117 (72%)
Frame = +1
Query: 4 LRNKSLIPQSIITFNTRLLTNSSAFPDVPTTAYYDDLVNAAGRERDLETVRYLLNKRVRD 183
L K LIPQS++ TR T S AFPD PT+AYYDDLVNAAG ERDLETVRYLLNKR RD
Sbjct: 7 LPTKFLIPQSVLV--TRSFTKSGAFPDEPTSAYYDDLVNAAGHERDLETVRYLLNKRARD 64
Query: 184 SCXXXXXXXXXXXXXXXSLSILNDLYKTLARLDKGFPRKSAYDTLIARLCKITRIDE 354
C SLS+L+DL +TLARLDKGFPRKSAYDTLI RLCK+ +IDE
Sbjct: 65 CCFNTANTFNFITNTENSLSVLSDLCRTLARLDKGFPRKSAYDTLIGRLCKLKKIDE 121
>XP_006435776.1 hypothetical protein CICLE_v10033792mg [Citrus clementina]
ESR49016.1 hypothetical protein CICLE_v10033792mg
[Citrus clementina]
Length = 556
Score = 149 bits (375), Expect = 5e-40
Identities = 78/117 (66%), Positives = 86/117 (73%)
Frame = +1
Query: 4 LRNKSLIPQSIITFNTRLLTNSSAFPDVPTTAYYDDLVNAAGRERDLETVRYLLNKRVRD 183
L K LIPQS++ TR T S AFPD PT+AYYDDLVNAAG ERDLETVRYLLNKR RD
Sbjct: 7 LPTKFLIPQSVLV--TRSFTKSGAFPDEPTSAYYDDLVNAAGHERDLETVRYLLNKRARD 64
Query: 184 SCXXXXXXXXXXXXXXXSLSILNDLYKTLARLDKGFPRKSAYDTLIARLCKITRIDE 354
C SLS+L+DL +TLARLDKGFPRKSAYDTLIARLCK+ +IDE
Sbjct: 65 CCFNTANTFNFITNTENSLSVLSDLCRTLARLDKGFPRKSAYDTLIARLCKLKKIDE 121
>XP_009345186.1 PREDICTED: pentatricopeptide repeat-containing protein
At3g56030-like [Pyrus x bretschneideri]
Length = 332
Score = 123 bits (309), Expect = 7e-32
Identities = 64/113 (56%), Positives = 77/113 (68%), Gaps = 4/113 (3%)
Frame = +1
Query: 28 QSIITFNTRLLT----NSSAFPDVPTTAYYDDLVNAAGRERDLETVRYLLNKRVRDSCXX 195
+S++TF R + S FPDVPTTAYYD+LV AAG RD + + YLLNKRV+D C
Sbjct: 15 RSVVTFAARFFSIQNPTLSPFPDVPTTAYYDNLVIAAGHSRDFDNLHYLLNKRVKDHCFN 74
Query: 196 XXXXXXXXXXXXXSLSILNDLYKTLARLDKGFPRKSAYDTLIARLCKITRIDE 354
SLS+L+DL KTLARLD+GF RKSAYD+LIARLCKI R+DE
Sbjct: 75 TTNTFRFLTNTDSSLSVLDDLTKTLARLDRGFTRKSAYDSLIARLCKIERVDE 127
>XP_008374207.1 PREDICTED: pentatricopeptide repeat-containing protein At3g56030
[Malus domestica]
Length = 332
Score = 123 bits (309), Expect = 7e-32
Identities = 63/113 (55%), Positives = 78/113 (69%), Gaps = 4/113 (3%)
Frame = +1
Query: 28 QSIITFNTRLLTNSSA----FPDVPTTAYYDDLVNAAGRERDLETVRYLLNKRVRDSCXX 195
+S++T+ TR + + FPDVPTTAYYD+LV AAG RD + + YLLNKRV+D C
Sbjct: 15 RSVLTYATRFFSTQNPTLTPFPDVPTTAYYDNLVIAAGHSRDFDNLHYLLNKRVKDHCFN 74
Query: 196 XXXXXXXXXXXXXSLSILNDLYKTLARLDKGFPRKSAYDTLIARLCKITRIDE 354
SLS+L+DL KTLARLD+GF RKSAYD+LIARLCKI R+DE
Sbjct: 75 TTNTFRFLTNTDSSLSVLDDLTKTLARLDRGFTRKSAYDSLIARLCKIERVDE 127
>XP_008233785.1 PREDICTED: pentatricopeptide repeat-containing protein At3g56030
[Prunus mume]
Length = 328
Score = 120 bits (301), Expect = 1e-30
Identities = 58/97 (59%), Positives = 71/97 (73%)
Frame = +1
Query: 64 NSSAFPDVPTTAYYDDLVNAAGRERDLETVRYLLNKRVRDSCXXXXXXXXXXXXXXXSLS 243
N + FPD+PT+AYYDD VNAAGR RD + +R+LLNKRV+D C SLS
Sbjct: 31 NFNTFPDIPTSAYYDDQVNAAGRSRDFDGLRHLLNKRVKDHCFNTTNTFKFITSTDASLS 90
Query: 244 ILNDLYKTLARLDKGFPRKSAYDTLIARLCKITRIDE 354
+L+DL +TLARLD GF RKSAYD+LIARLCK+ R+DE
Sbjct: 91 VLDDLCRTLARLDNGFARKSAYDSLIARLCKLERVDE 127
>XP_002512332.1 PREDICTED: pentatricopeptide repeat-containing protein At3g56030
isoform X1 [Ricinus communis] EEF49784.1
pentatricopeptide repeat-containing protein, putative
[Ricinus communis]
Length = 619
Score = 120 bits (302), Expect = 1e-29
Identities = 65/121 (53%), Positives = 78/121 (64%), Gaps = 4/121 (3%)
Frame = +1
Query: 4 LRNKSLIPQSIITFNTRLLTNSS----AFPDVPTTAYYDDLVNAAGRERDLETVRYLLNK 171
L + L QSI++ TR T + +FPD PT AYYD LVNAAG ERD +T+ +LLNK
Sbjct: 293 LHHMPLNSQSILSLTTRCFTTQNDKLNSFPDKPTAAYYDGLVNAAGHERDFKTLHHLLNK 352
Query: 172 RVRDSCXXXXXXXXXXXXXXXSLSILNDLYKTLARLDKGFPRKSAYDTLIARLCKITRID 351
RVRD C SLS+L+DL +TLARLDKG PR SAY+ LIARLCK+ RI
Sbjct: 353 RVRDHCFNTTNTFKFITNTDNSLSVLDDLIQTLARLDKGIPRMSAYNMLIARLCKLDRIQ 412
Query: 352 E 354
E
Sbjct: 413 E 413
>XP_018806372.1 PREDICTED: pentatricopeptide repeat-containing protein
At3g56030-like [Juglans regia]
Length = 335
Score = 113 bits (282), Expect = 7e-28
Identities = 60/112 (53%), Positives = 77/112 (68%), Gaps = 4/112 (3%)
Frame = +1
Query: 31 SIITFNTRLLT----NSSAFPDVPTTAYYDDLVNAAGRERDLETVRYLLNKRVRDSCXXX 198
SII TR T N+++FP PT+AYYD+LV AAGR RD E +R+LLNKR+RD C
Sbjct: 16 SIILLGTRSFTTQNPNANSFPLEPTSAYYDELVLAAGRSRDFEELRHLLNKRIRDGCFNT 75
Query: 199 XXXXXXXXXXXXSLSILNDLYKTLARLDKGFPRKSAYDTLIARLCKITRIDE 354
SLSIL+DL +TLARLDKG PR+SA+++LI RLCK+ R++E
Sbjct: 76 SKTFKFISNNDASLSILDDLSQTLARLDKGLPRQSAHNSLILRLCKLGRVEE 127
>XP_012089117.1 PREDICTED: pentatricopeptide repeat-containing protein At3g56030
isoform X2 [Jatropha curcas]
Length = 599
Score = 115 bits (287), Expect = 2e-27
Identities = 61/111 (54%), Positives = 73/111 (65%), Gaps = 4/111 (3%)
Frame = +1
Query: 34 IITFNTRLLT----NSSAFPDVPTTAYYDDLVNAAGRERDLETVRYLLNKRVRDSCXXXX 201
I++ TR N+++FPD T AYYDDLVNAAGRERD + YLLNKR RD+C
Sbjct: 283 ILSITTRFFATQSPNTNSFPDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNST 342
Query: 202 XXXXXXXXXXXSLSILNDLYKTLARLDKGFPRKSAYDTLIARLCKITRIDE 354
SLSIL+D+ +TLARLD GF R SAY+TLIARLCK+ RI E
Sbjct: 343 NTFKFIANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKE 393
>XP_012089116.1 PREDICTED: pentatricopeptide repeat-containing protein At3g56030
isoform X1 [Jatropha curcas]
Length = 618
Score = 115 bits (287), Expect = 2e-27
Identities = 61/111 (54%), Positives = 73/111 (65%), Gaps = 4/111 (3%)
Frame = +1
Query: 34 IITFNTRLLT----NSSAFPDVPTTAYYDDLVNAAGRERDLETVRYLLNKRVRDSCXXXX 201
I++ TR N+++FPD T AYYDDLVNAAGRERD + YLLNKR RD+C
Sbjct: 302 ILSITTRFFATQSPNTNSFPDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNST 361
Query: 202 XXXXXXXXXXXSLSILNDLYKTLARLDKGFPRKSAYDTLIARLCKITRIDE 354
SLSIL+D+ +TLARLD GF R SAY+TLIARLCK+ RI E
Sbjct: 362 NTFKFIANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKE 412
>OAY42224.1 hypothetical protein MANES_09G163100 [Manihot esculenta]
Length = 559
Score = 114 bits (286), Expect = 2e-27
Identities = 63/112 (56%), Positives = 74/112 (66%), Gaps = 4/112 (3%)
Frame = +1
Query: 31 SIITFNTRLLT----NSSAFPDVPTTAYYDDLVNAAGRERDLETVRYLLNKRVRDSCXXX 198
SI++ T T + S+F D PT AYYD+LVNAAG ERD T+RYLLNKRVRDSC
Sbjct: 240 SILSITTSSFTPKSRSLSSFADRPTAAYYDNLVNAAGDERDFNTLRYLLNKRVRDSCFNT 299
Query: 199 XXXXXXXXXXXXSLSILNDLYKTLARLDKGFPRKSAYDTLIARLCKITRIDE 354
SLS+L+DL +TLARLD G PR SAY+ LIARLCK+ RI E
Sbjct: 300 TNTFRFITNTENSLSVLDDLTETLARLDSGVPRTSAYNALIARLCKLGRIKE 351
>XP_015877440.1 PREDICTED: pentatricopeptide repeat-containing protein At3g56030
[Ziziphus jujuba]
Length = 340
Score = 110 bits (274), Expect = 1e-26
Identities = 57/97 (58%), Positives = 69/97 (71%)
Frame = +1
Query: 64 NSSAFPDVPTTAYYDDLVNAAGRERDLETVRYLLNKRVRDSCXXXXXXXXXXXXXXXSLS 243
N + FPD PT+AYYD+LVN AGR RD ET+R+LLNKRV+D C SLS
Sbjct: 37 NPNPFPDEPTSAYYDELVNTAGRSRDFETLRHLLNKRVKDGCFPTSKTFSFITSAESSLS 96
Query: 244 ILNDLYKTLARLDKGFPRKSAYDTLIARLCKITRIDE 354
L+ L TL++LDKGF RKSAYD+LI+RLCK+ RIDE
Sbjct: 97 -LDVLSHTLSQLDKGFTRKSAYDSLISRLCKLDRIDE 132
>XP_002311557.2 pentatricopeptide repeat-containing family protein [Populus
trichocarpa] EEE88924.2 pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
Length = 216
Score = 105 bits (261), Expect = 8e-26
Identities = 57/107 (53%), Positives = 69/107 (64%)
Frame = +1
Query: 4 LRNKSLIPQSIITFNTRLLTNSSAFPDVPTTAYYDDLVNAAGRERDLETVRYLLNKRVRD 183
L KSLIP+S++ T + S FP++PT+AYYDDL N A +R+ +RYLLNKRVRD
Sbjct: 9 LAKKSLIPRSLVCLTTA--SPFSTFPNLPTSAYYDDLSNTARHKRNFSKLRYLLNKRVRD 66
Query: 184 SCXXXXXXXXXXXXXXXSLSILNDLYKTLARLDKGFPRKSAYDTLIA 324
C SLSIL DL +TLARLD GFPRKSA+D LIA
Sbjct: 67 HCFNTTSTLKFITTSETSLSILADLIQTLARLDNGFPRKSAFDALIA 113
>OMO50073.1 hypothetical protein CCACVL1_30661 [Corchorus capsularis]
Length = 333
Score = 105 bits (263), Expect = 4e-25
Identities = 53/98 (54%), Positives = 64/98 (65%)
Frame = +1
Query: 61 TNSSAFPDVPTTAYYDDLVNAAGRERDLETVRYLLNKRVRDSCXXXXXXXXXXXXXXXSL 240
T FPD PT+AYYD+ VN AGR DLETV YLLNKR RD C SL
Sbjct: 34 TADEPFPDEPTSAYYDEQVNKAGRNGDLETVGYLLNKRYRDGCFNTVNTFKFLTDNESSL 93
Query: 241 SILNDLYKTLARLDKGFPRKSAYDTLIARLCKITRIDE 354
++++ L +TL+RLDKG+ RK A+D LIARLCK+ R DE
Sbjct: 94 ALIDPLIQTLSRLDKGYTRKQAFDLLIARLCKLERTDE 131
>OMP08494.1 hypothetical protein COLO4_06431 [Corchorus olitorius]
Length = 336
Score = 105 bits (263), Expect = 4e-25
Identities = 53/98 (54%), Positives = 64/98 (65%)
Frame = +1
Query: 61 TNSSAFPDVPTTAYYDDLVNAAGRERDLETVRYLLNKRVRDSCXXXXXXXXXXXXXXXSL 240
T FPD PT+AYYD+ VN AGR DLETV YLLNKR RD C SL
Sbjct: 33 TADEPFPDEPTSAYYDEQVNKAGRNGDLETVGYLLNKRYRDGCFNTVNTFKFLTDTESSL 92
Query: 241 SILNDLYKTLARLDKGFPRKSAYDTLIARLCKITRIDE 354
++++ L +TL+RLDKG+ RK A+D LIARLCK+ R DE
Sbjct: 93 ALIDPLIQTLSRLDKGYTRKQAFDLLIARLCKLERTDE 130
>XP_011024995.1 PREDICTED: pentatricopeptide repeat-containing protein At2g40240,
mitochondrial-like [Populus euphratica]
Length = 214
Score = 102 bits (255), Expect = 6e-25
Identities = 57/107 (53%), Positives = 67/107 (62%)
Frame = +1
Query: 4 LRNKSLIPQSIITFNTRLLTNSSAFPDVPTTAYYDDLVNAAGRERDLETVRYLLNKRVRD 183
L KSLIP S++ T + S FP++P +AYYDDL N A +RDL +RYLLNKRVRD
Sbjct: 9 LAKKSLIPGSLVCLTTA--SPFSTFPNLPASAYYDDLSNTARHKRDLSKLRYLLNKRVRD 66
Query: 184 SCXXXXXXXXXXXXXXXSLSILNDLYKTLARLDKGFPRKSAYDTLIA 324
C SLSIL DL +TLA LD GFPRKSA+D LIA
Sbjct: 67 HCFNTTSTFKFITNSETSLSILADLIQTLAPLDNGFPRKSAFDALIA 113
>CAN73347.1 hypothetical protein VITISV_037919 [Vitis vinifera]
Length = 330
Score = 102 bits (254), Expect = 8e-24
Identities = 55/107 (51%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Frame = +1
Query: 55 LLTNSSAF-------PDVPTTAYYDDLVNAAGRERDLETVRYLLNKRVRDSCXXXXXXXX 213
LL N+S F P PT AYYD+L+N AGR RD +V LLNKRVRD C
Sbjct: 17 LLCNTSRFFNTQNPNPYEPTVAYYDNLINTAGRNRDFASVCNLLNKRVRDGCFNTNHTFD 76
Query: 214 XXXXXXXSLSILNDLYKTLARLDKGFPRKSAYDTLIARLCKITRIDE 354
LS+L++L + LA LDKGF RKSAYD+LIARLC++ R+DE
Sbjct: 77 FITNTDAGLSVLDELSQALAHLDKGFXRKSAYDSLIARLCRLKRVDE 123
>XP_010034146.1 PREDICTED: pentatricopeptide repeat-containing protein
At3g56030-like [Eucalyptus grandis]
Length = 342
Score = 102 bits (254), Expect = 1e-23
Identities = 50/92 (54%), Positives = 62/92 (67%)
Frame = +1
Query: 70 SAFPDVPTTAYYDDLVNAAGRERDLETVRYLLNKRVRDSCXXXXXXXXXXXXXXXSLSIL 249
+A D PT+AYYDDL+NAAGR D VR+LL KRVRD C SLS L
Sbjct: 33 TAIRDAPTSAYYDDLINAAGRRGDFAAVRHLLGKRVRDGCFNTGDTFRFLTQTETSLSAL 92
Query: 250 NDLYKTLARLDKGFPRKSAYDTLIARLCKITR 345
+DL + L+R+D+GFPRKSA+D LIARLC++ R
Sbjct: 93 DDLLRALSRVDRGFPRKSAFDALIARLCRLGR 124
>XP_017984693.1 PREDICTED: pentatricopeptide repeat-containing protein At3g56030
[Theobroma cacao]
Length = 361
Score = 102 bits (254), Expect = 1e-23
Identities = 51/93 (54%), Positives = 64/93 (68%)
Frame = +1
Query: 76 FPDVPTTAYYDDLVNAAGRERDLETVRYLLNKRVRDSCXXXXXXXXXXXXXXXSLSILND 255
FPD PT+AYYD+ V AGR DL TV +LLNKRVRD C S SIL+D
Sbjct: 58 FPDEPTSAYYDEQVYKAGRSGDLVTVGHLLNKRVRDGCFNTTKTFKFLTATESSFSILDD 117
Query: 256 LYKTLARLDKGFPRKSAYDTLIARLCKITRIDE 354
L +T++RLDKG PRK+A+D+LI+RLCK+ + DE
Sbjct: 118 LVRTVSRLDKGVPRKNAFDSLISRLCKLGKTDE 150
>EOY17722.1 Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao]
Length = 361
Score = 102 bits (254), Expect = 1e-23
Identities = 51/93 (54%), Positives = 64/93 (68%)
Frame = +1
Query: 76 FPDVPTTAYYDDLVNAAGRERDLETVRYLLNKRVRDSCXXXXXXXXXXXXXXXSLSILND 255
FPD PT+AYYD+ V AGR DL TV +LLNKRVRD C S SIL+D
Sbjct: 58 FPDEPTSAYYDEQVYKAGRSGDLVTVGHLLNKRVRDGCFNTTKTFKFLTATESSFSILDD 117
Query: 256 LYKTLARLDKGFPRKSAYDTLIARLCKITRIDE 354
L +T++RLDKG PRK+A+D+LI+RLCK+ + DE
Sbjct: 118 LVRTVSRLDKGVPRKNAFDSLISRLCKLGKTDE 150