BLASTX nr result
ID: Phellodendron21_contig00040070
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00040070
(268 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006449306.1 hypothetical protein CICLE_v10014062mg [Citrus cl... 103 1e-32
XP_006467828.1 PREDICTED: mediator of RNA polymerase II transcri... 102 2e-32
XP_006467829.1 PREDICTED: mediator of RNA polymerase II transcri... 102 2e-32
KDO75891.1 hypothetical protein CISIN_1g0008481mg, partial [Citr... 102 2e-32
KDO75893.1 hypothetical protein CISIN_1g0008481mg, partial [Citr... 102 2e-32
KDO75894.1 hypothetical protein CISIN_1g0008481mg, partial [Citr... 102 2e-32
KDO75895.1 hypothetical protein CISIN_1g0008481mg, partial [Citr... 102 2e-26
XP_008225051.1 PREDICTED: mediator of RNA polymerase II transcri... 87 4e-25
OMO65128.1 hypothetical protein COLO4_31502 [Corchorus olitorius] 84 7e-25
XP_004293527.2 PREDICTED: mediator of RNA polymerase II transcri... 87 7e-25
XP_002519035.1 PREDICTED: mediator of RNA polymerase II transcri... 84 9e-25
XP_015574599.1 PREDICTED: mediator of RNA polymerase II transcri... 84 9e-25
XP_015574600.1 PREDICTED: mediator of RNA polymerase II transcri... 84 9e-25
XP_015574601.1 PREDICTED: mediator of RNA polymerase II transcri... 84 9e-25
ONI10373.1 hypothetical protein PRUPE_4G043900 [Prunus persica] ... 84 2e-24
OMO76475.1 hypothetical protein CCACVL1_15645 [Corchorus capsula... 79 2e-23
XP_017978680.1 PREDICTED: mediator of RNA polymerase II transcri... 78 3e-23
EOY28294.1 Sensitive to freezing 6 [Theobroma cacao] 78 3e-23
XP_006377328.1 hypothetical protein POPTR_0011s04940g [Populus t... 83 8e-23
XP_012454340.1 PREDICTED: mediator of RNA polymerase II transcri... 78 8e-23
>XP_006449306.1 hypothetical protein CICLE_v10014062mg [Citrus clementina] ESR62546.1
hypothetical protein CICLE_v10014062mg [Citrus
clementina]
Length = 1252
Score = 103 bits (258), Expect(2) = 1e-32
Identities = 51/62 (82%), Positives = 53/62 (85%)
Frame = -2
Query: 267 RSTDANVQKPQLGAPGKVEEINSVPGKPTLTMVKTDEGQVARAGQTVPAAKGVEEGPSAG 88
R+ DANVQKPQL APGKVEEINSVPGKPT MVK DEGQVARAGQTVP AKGVEEGP+
Sbjct: 944 RNNDANVQKPQLSAPGKVEEINSVPGKPTSAMVKLDEGQVARAGQTVPGAKGVEEGPAGR 1003
Query: 87 QK 82
K
Sbjct: 1004 PK 1005
Score = 63.5 bits (153), Expect(2) = 1e-32
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 88 PKMGFGNAGQGYTFEEVKVLFLVLMDLCR 2
PKMGFGNAGQGYTFEEVKVLFL+LMDLCR
Sbjct: 1004 PKMGFGNAGQGYTFEEVKVLFLILMDLCR 1032
>XP_006467828.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X1 [Citrus sinensis]
Length = 1255
Score = 102 bits (255), Expect(2) = 2e-32
Identities = 50/62 (80%), Positives = 53/62 (85%)
Frame = -2
Query: 267 RSTDANVQKPQLGAPGKVEEINSVPGKPTLTMVKTDEGQVARAGQTVPAAKGVEEGPSAG 88
R+ DANVQKPQ+ APGKVEEINSVPGKPT MVK DEGQVARAGQTVP AKGVEEGP+
Sbjct: 947 RNNDANVQKPQVSAPGKVEEINSVPGKPTSAMVKLDEGQVARAGQTVPGAKGVEEGPAGR 1006
Query: 87 QK 82
K
Sbjct: 1007 PK 1008
Score = 63.5 bits (153), Expect(2) = 2e-32
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 88 PKMGFGNAGQGYTFEEVKVLFLVLMDLCR 2
PKMGFGNAGQGYTFEEVKVLFL+LMDLCR
Sbjct: 1007 PKMGFGNAGQGYTFEEVKVLFLILMDLCR 1035
>XP_006467829.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X2 [Citrus sinensis]
Length = 1057
Score = 102 bits (255), Expect(2) = 2e-32
Identities = 50/62 (80%), Positives = 53/62 (85%)
Frame = -2
Query: 267 RSTDANVQKPQLGAPGKVEEINSVPGKPTLTMVKTDEGQVARAGQTVPAAKGVEEGPSAG 88
R+ DANVQKPQ+ APGKVEEINSVPGKPT MVK DEGQVARAGQTVP AKGVEEGP+
Sbjct: 749 RNNDANVQKPQVSAPGKVEEINSVPGKPTSAMVKLDEGQVARAGQTVPGAKGVEEGPAGR 808
Query: 87 QK 82
K
Sbjct: 809 PK 810
Score = 63.5 bits (153), Expect(2) = 2e-32
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 88 PKMGFGNAGQGYTFEEVKVLFLVLMDLCR 2
PKMGFGNAGQGYTFEEVKVLFL+LMDLCR
Sbjct: 809 PKMGFGNAGQGYTFEEVKVLFLILMDLCR 837
>KDO75891.1 hypothetical protein CISIN_1g0008481mg, partial [Citrus sinensis]
KDO75892.1 hypothetical protein CISIN_1g0008481mg,
partial [Citrus sinensis]
Length = 802
Score = 102 bits (255), Expect(2) = 2e-32
Identities = 50/62 (80%), Positives = 53/62 (85%)
Frame = -2
Query: 267 RSTDANVQKPQLGAPGKVEEINSVPGKPTLTMVKTDEGQVARAGQTVPAAKGVEEGPSAG 88
R+ DANVQKPQ+ APGKVEEINSVPGKPT MVK DEGQVARAGQTVP AKGVEEGP+
Sbjct: 494 RNNDANVQKPQVSAPGKVEEINSVPGKPTSAMVKLDEGQVARAGQTVPGAKGVEEGPAGR 553
Query: 87 QK 82
K
Sbjct: 554 PK 555
Score = 63.5 bits (153), Expect(2) = 2e-32
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 88 PKMGFGNAGQGYTFEEVKVLFLVLMDLCR 2
PKMGFGNAGQGYTFEEVKVLFL+LMDLCR
Sbjct: 554 PKMGFGNAGQGYTFEEVKVLFLILMDLCR 582
>KDO75893.1 hypothetical protein CISIN_1g0008481mg, partial [Citrus sinensis]
Length = 766
Score = 102 bits (255), Expect(2) = 2e-32
Identities = 50/62 (80%), Positives = 53/62 (85%)
Frame = -2
Query: 267 RSTDANVQKPQLGAPGKVEEINSVPGKPTLTMVKTDEGQVARAGQTVPAAKGVEEGPSAG 88
R+ DANVQKPQ+ APGKVEEINSVPGKPT MVK DEGQVARAGQTVP AKGVEEGP+
Sbjct: 494 RNNDANVQKPQVSAPGKVEEINSVPGKPTSAMVKLDEGQVARAGQTVPGAKGVEEGPAGR 553
Query: 87 QK 82
K
Sbjct: 554 PK 555
Score = 63.5 bits (153), Expect(2) = 2e-32
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 88 PKMGFGNAGQGYTFEEVKVLFLVLMDLCR 2
PKMGFGNAGQGYTFEEVKVLFL+LMDLCR
Sbjct: 554 PKMGFGNAGQGYTFEEVKVLFLILMDLCR 582
>KDO75894.1 hypothetical protein CISIN_1g0008481mg, partial [Citrus sinensis]
Length = 637
Score = 102 bits (255), Expect(2) = 2e-32
Identities = 50/62 (80%), Positives = 53/62 (85%)
Frame = -2
Query: 267 RSTDANVQKPQLGAPGKVEEINSVPGKPTLTMVKTDEGQVARAGQTVPAAKGVEEGPSAG 88
R+ DANVQKPQ+ APGKVEEINSVPGKPT MVK DEGQVARAGQTVP AKGVEEGP+
Sbjct: 494 RNNDANVQKPQVSAPGKVEEINSVPGKPTSAMVKLDEGQVARAGQTVPGAKGVEEGPAGR 553
Query: 87 QK 82
K
Sbjct: 554 PK 555
Score = 63.5 bits (153), Expect(2) = 2e-32
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 88 PKMGFGNAGQGYTFEEVKVLFLVLMDLCR 2
PKMGFGNAGQGYTFEEVKVLFL+LMDLCR
Sbjct: 554 PKMGFGNAGQGYTFEEVKVLFLILMDLCR 582
>KDO75895.1 hypothetical protein CISIN_1g0008481mg, partial [Citrus sinensis]
Length = 613
Score = 102 bits (255), Expect(2) = 2e-26
Identities = 50/62 (80%), Positives = 53/62 (85%)
Frame = -2
Query: 267 RSTDANVQKPQLGAPGKVEEINSVPGKPTLTMVKTDEGQVARAGQTVPAAKGVEEGPSAG 88
R+ DANVQKPQ+ APGKVEEINSVPGKPT MVK DEGQVARAGQTVP AKGVEEGP+
Sbjct: 494 RNNDANVQKPQVSAPGKVEEINSVPGKPTSAMVKLDEGQVARAGQTVPGAKGVEEGPAGR 553
Query: 87 QK 82
K
Sbjct: 554 PK 555
Score = 43.9 bits (102), Expect(2) = 2e-26
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = -1
Query: 88 PKMGFGNAGQGYTFEEVKVLF 26
PKMGFGNAGQGYTFEEV+ +F
Sbjct: 554 PKMGFGNAGQGYTFEEVQTVF 574
>XP_008225051.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
[Prunus mume] XP_016648678.1 PREDICTED: mediator of RNA
polymerase II transcription subunit 16 [Prunus mume]
Length = 1243
Score = 86.7 bits (213), Expect(2) = 4e-25
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = -2
Query: 267 RSTDANVQKPQLGAPGKVEEINSVPGKPTLTMVKTDEGQVARAGQTVPAAKGVEEGPS 94
R+TDAN+QKPQ GAPGKVEE++SV K + TMV+ DEGQVARAGQ +P AKG EEGP+
Sbjct: 935 RNTDANMQKPQPGAPGKVEEVSSVTVKSSSTMVRQDEGQVARAGQIIPGAKGAEEGPA 992
Score = 55.5 bits (132), Expect(2) = 4e-25
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = -1
Query: 85 KMGFGNAGQGYTFEEVKVLFLVLMDLCR 2
++G GNAGQGYTFEEVKVLFL+LMDLCR
Sbjct: 996 RLGAGNAGQGYTFEEVKVLFLILMDLCR 1023
>OMO65128.1 hypothetical protein COLO4_31502 [Corchorus olitorius]
Length = 1251
Score = 83.6 bits (205), Expect(2) = 7e-25
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = -2
Query: 267 RSTDANVQKPQLGAPGKVEEINSVPGKPTLTMVKTDEGQVARAGQTVPAAKGVEEGPSAG 88
R++DAN QKPQ GAPGK+EE+NSV KPT TM + DE Q +RAGQ VP AKG EEGP+
Sbjct: 943 RTSDANPQKPQPGAPGKMEEVNSVSVKPTTTMTRADEAQGSRAGQVVPGAKGAEEGPAGR 1002
Query: 87 QK 82
K
Sbjct: 1003 LK 1004
Score = 57.8 bits (138), Expect(2) = 7e-25
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1
Query: 85 KMGFGNAGQGYTFEEVKVLFLVLMDLCR 2
KMG GNAGQGYTFEEVKVLFL+LMDLCR
Sbjct: 1004 KMGSGNAGQGYTFEEVKVLFLILMDLCR 1031
>XP_004293527.2 PREDICTED: mediator of RNA polymerase II transcription subunit 16
[Fragaria vesca subsp. vesca] XP_011460246.1 PREDICTED:
mediator of RNA polymerase II transcription subunit 16
[Fragaria vesca subsp. vesca]
Length = 1244
Score = 87.0 bits (214), Expect(2) = 7e-25
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -2
Query: 267 RSTDANVQKPQLGAPGKVEEINSVPGKPTLTMVKTDEGQVARAGQTVPAAKGVEEGPS 94
R+TDAN+QKPQ GAPGKVEEI+SV KP+ T+V+ +EGQV RAGQ +P AKGVEEGP+
Sbjct: 936 RNTDANMQKPQPGAPGKVEEISSVSVKPSSTIVRPEEGQVTRAGQIIPGAKGVEEGPA 993
Score = 54.3 bits (129), Expect(2) = 7e-25
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = -1
Query: 85 KMGFGNAGQGYTFEEVKVLFLVLMDLCR 2
++G GNAGQGYTFEEVKVLFL+LMDLC+
Sbjct: 997 RLGAGNAGQGYTFEEVKVLFLILMDLCK 1024
>XP_002519035.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X1 [Ricinus communis] EEF43246.1 conserved
hypothetical protein [Ricinus communis]
Length = 1255
Score = 83.6 bits (205), Expect(2) = 9e-25
Identities = 40/58 (68%), Positives = 44/58 (75%)
Frame = -2
Query: 267 RSTDANVQKPQLGAPGKVEEINSVPGKPTLTMVKTDEGQVARAGQTVPAAKGVEEGPS 94
RSTD N+QKPQ GAPGKVEE NSV KP MV++DE Q AR GQ VP KGVEEGP+
Sbjct: 947 RSTDTNMQKPQSGAPGKVEEANSVSSKPAQAMVRSDEVQTARGGQLVPGGKGVEEGPA 1004
Score = 57.4 bits (137), Expect(2) = 9e-25
Identities = 24/28 (85%), Positives = 28/28 (100%)
Frame = -1
Query: 85 KMGFGNAGQGYTFEEVKVLFLVLMDLCR 2
++G+GNAGQGYTFEEVKVLFL+LMDLCR
Sbjct: 1008 RLGYGNAGQGYTFEEVKVLFLILMDLCR 1035
>XP_015574599.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X2 [Ricinus communis]
Length = 1083
Score = 83.6 bits (205), Expect(2) = 9e-25
Identities = 40/58 (68%), Positives = 44/58 (75%)
Frame = -2
Query: 267 RSTDANVQKPQLGAPGKVEEINSVPGKPTLTMVKTDEGQVARAGQTVPAAKGVEEGPS 94
RSTD N+QKPQ GAPGKVEE NSV KP MV++DE Q AR GQ VP KGVEEGP+
Sbjct: 947 RSTDTNMQKPQSGAPGKVEEANSVSSKPAQAMVRSDEVQTARGGQLVPGGKGVEEGPA 1004
Score = 57.4 bits (137), Expect(2) = 9e-25
Identities = 24/28 (85%), Positives = 28/28 (100%)
Frame = -1
Query: 85 KMGFGNAGQGYTFEEVKVLFLVLMDLCR 2
++G+GNAGQGYTFEEVKVLFL+LMDLCR
Sbjct: 1008 RLGYGNAGQGYTFEEVKVLFLILMDLCR 1035
>XP_015574600.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X3 [Ricinus communis]
Length = 1058
Score = 83.6 bits (205), Expect(2) = 9e-25
Identities = 40/58 (68%), Positives = 44/58 (75%)
Frame = -2
Query: 267 RSTDANVQKPQLGAPGKVEEINSVPGKPTLTMVKTDEGQVARAGQTVPAAKGVEEGPS 94
RSTD N+QKPQ GAPGKVEE NSV KP MV++DE Q AR GQ VP KGVEEGP+
Sbjct: 750 RSTDTNMQKPQSGAPGKVEEANSVSSKPAQAMVRSDEVQTARGGQLVPGGKGVEEGPA 807
Score = 57.4 bits (137), Expect(2) = 9e-25
Identities = 24/28 (85%), Positives = 28/28 (100%)
Frame = -1
Query: 85 KMGFGNAGQGYTFEEVKVLFLVLMDLCR 2
++G+GNAGQGYTFEEVKVLFL+LMDLCR
Sbjct: 811 RLGYGNAGQGYTFEEVKVLFLILMDLCR 838
>XP_015574601.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X4 [Ricinus communis]
Length = 1010
Score = 83.6 bits (205), Expect(2) = 9e-25
Identities = 40/58 (68%), Positives = 44/58 (75%)
Frame = -2
Query: 267 RSTDANVQKPQLGAPGKVEEINSVPGKPTLTMVKTDEGQVARAGQTVPAAKGVEEGPS 94
RSTD N+QKPQ GAPGKVEE NSV KP MV++DE Q AR GQ VP KGVEEGP+
Sbjct: 702 RSTDTNMQKPQSGAPGKVEEANSVSSKPAQAMVRSDEVQTARGGQLVPGGKGVEEGPA 759
Score = 57.4 bits (137), Expect(2) = 9e-25
Identities = 24/28 (85%), Positives = 28/28 (100%)
Frame = -1
Query: 85 KMGFGNAGQGYTFEEVKVLFLVLMDLCR 2
++G+GNAGQGYTFEEVKVLFL+LMDLCR
Sbjct: 763 RLGYGNAGQGYTFEEVKVLFLILMDLCR 790
>ONI10373.1 hypothetical protein PRUPE_4G043900 [Prunus persica] ONI10374.1
hypothetical protein PRUPE_4G043900 [Prunus persica]
Length = 1243
Score = 84.3 bits (207), Expect(2) = 2e-24
Identities = 40/58 (68%), Positives = 48/58 (82%)
Frame = -2
Query: 267 RSTDANVQKPQLGAPGKVEEINSVPGKPTLTMVKTDEGQVARAGQTVPAAKGVEEGPS 94
R+TDAN+QKPQ APGKVEE++SV K + TMV+ DEGQVARAGQ +P AKG EEGP+
Sbjct: 935 RNTDANMQKPQPAAPGKVEEVSSVTVKSSSTMVRQDEGQVARAGQIIPGAKGAEEGPA 992
Score = 55.5 bits (132), Expect(2) = 2e-24
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = -1
Query: 85 KMGFGNAGQGYTFEEVKVLFLVLMDLCR 2
++G GNAGQGYTFEEVKVLFL+LMDLCR
Sbjct: 996 RLGAGNAGQGYTFEEVKVLFLILMDLCR 1023
>OMO76475.1 hypothetical protein CCACVL1_15645 [Corchorus capsularis]
Length = 1250
Score = 78.6 bits (192), Expect(2) = 2e-23
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = -2
Query: 267 RSTDANVQKPQLGAPGKVEEINSVPGKPTLTMVKTDEGQVARAGQTVPAAKGVEEGPSAG 88
R++DAN QKPQ GAPGK+EE+NSV KPT TM + DE Q +RAGQ VP AKG EEGP+
Sbjct: 943 RTSDANPQKPQPGAPGKMEEVNSVSVKPT-TMTRGDEAQGSRAGQVVPGAKGAEEGPAGR 1001
Query: 87 QK 82
K
Sbjct: 1002 LK 1003
Score = 57.8 bits (138), Expect(2) = 2e-23
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1
Query: 85 KMGFGNAGQGYTFEEVKVLFLVLMDLCR 2
KMG GNAGQGYTFEEVKVLFL+LMDLCR
Sbjct: 1003 KMGSGNAGQGYTFEEVKVLFLILMDLCR 1030
>XP_017978680.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
[Theobroma cacao]
Length = 1249
Score = 78.2 bits (191), Expect(2) = 3e-23
Identities = 38/62 (61%), Positives = 45/62 (72%)
Frame = -2
Query: 267 RSTDANVQKPQLGAPGKVEEINSVPGKPTLTMVKTDEGQVARAGQTVPAAKGVEEGPSAG 88
R+ DAN QK Q GAPGK+EE+NSV KPT TM ++DE Q +R GQ VP AKG EEGP+
Sbjct: 941 RTADANHQKSQPGAPGKMEEVNSVSVKPTTTMTRSDEAQGSRTGQVVPGAKGFEEGPAGR 1000
Query: 87 QK 82
K
Sbjct: 1001 LK 1002
Score = 57.8 bits (138), Expect(2) = 3e-23
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1
Query: 85 KMGFGNAGQGYTFEEVKVLFLVLMDLCR 2
KMG GNAGQGYTFEEVKVLFL+LMDLCR
Sbjct: 1002 KMGSGNAGQGYTFEEVKVLFLILMDLCR 1029
>EOY28294.1 Sensitive to freezing 6 [Theobroma cacao]
Length = 1249
Score = 78.2 bits (191), Expect(2) = 3e-23
Identities = 38/62 (61%), Positives = 45/62 (72%)
Frame = -2
Query: 267 RSTDANVQKPQLGAPGKVEEINSVPGKPTLTMVKTDEGQVARAGQTVPAAKGVEEGPSAG 88
R+ DAN QK Q GAPGK+EE+NSV KPT TM ++DE Q +R GQ VP AKG EEGP+
Sbjct: 941 RTADANHQKSQPGAPGKMEEVNSVSVKPTTTMTRSDEAQGSRTGQVVPGAKGFEEGPAGR 1000
Query: 87 QK 82
K
Sbjct: 1001 LK 1002
Score = 57.8 bits (138), Expect(2) = 3e-23
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1
Query: 85 KMGFGNAGQGYTFEEVKVLFLVLMDLCR 2
KMG GNAGQGYTFEEVKVLFL+LMDLCR
Sbjct: 1002 KMGSGNAGQGYTFEEVKVLFLILMDLCR 1029
>XP_006377328.1 hypothetical protein POPTR_0011s04940g [Populus trichocarpa]
ERP55125.1 hypothetical protein POPTR_0011s04940g
[Populus trichocarpa]
Length = 1249
Score = 83.2 bits (204), Expect(2) = 8e-23
Identities = 39/57 (68%), Positives = 45/57 (78%)
Frame = -2
Query: 264 STDANVQKPQLGAPGKVEEINSVPGKPTLTMVKTDEGQVARAGQTVPAAKGVEEGPS 94
STD NVQKPQ GAPGKVEEIN+V KP MV++DEGQ AR GQ +P AK VE+GP+
Sbjct: 944 STDTNVQKPQSGAPGKVEEINTVTSKPAPAMVRSDEGQTARGGQVMPGAKPVEDGPA 1000
Score = 51.2 bits (121), Expect(2) = 8e-23
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = -1
Query: 85 KMGFGNAGQGYTFEEVKVLFLVLMDLCR 2
++G GNAGQGY+FEEVKVLF +LMDLCR
Sbjct: 1004 RVGSGNAGQGYSFEEVKVLFRILMDLCR 1031
>XP_012454340.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X1 [Gossypium raimondii] XP_012454341.1
PREDICTED: mediator of RNA polymerase II transcription
subunit 16 isoform X1 [Gossypium raimondii]
XP_012454342.1 PREDICTED: mediator of RNA polymerase II
transcription subunit 16 isoform X2 [Gossypium raimondii]
KJB69488.1 hypothetical protein B456_011G026100
[Gossypium raimondii]
Length = 1248
Score = 78.2 bits (191), Expect(2) = 8e-23
Identities = 40/57 (70%), Positives = 44/57 (77%)
Frame = -2
Query: 267 RSTDANVQKPQLGAPGKVEEINSVPGKPTLTMVKTDEGQVARAGQTVPAAKGVEEGP 97
R+TDAN QK Q GAPGK+EE+NSV KPT TM + DE Q ARAGQ VP AKG EEGP
Sbjct: 942 RNTDANPQKNQPGAPGKMEEVNSVAAKPT-TMTRPDEAQGARAGQLVPGAKGAEEGP 997
Score = 56.2 bits (134), Expect(2) = 8e-23
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -1
Query: 85 KMGFGNAGQGYTFEEVKVLFLVLMDLCR 2
K+G GNAGQGYTFEEVKVLFL+LMDLCR
Sbjct: 1001 KIGSGNAGQGYTFEEVKVLFLILMDLCR 1028