BLASTX nr result

ID: Phellodendron21_contig00039528 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00039528
         (252 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KDO51554.1 hypothetical protein CISIN_1g005475mg [Citrus sinensis]    100   7e-23
XP_006447313.1 hypothetical protein CICLE_v10014470mg [Citrus cl...    97   1e-21
CBI28917.3 unnamed protein product, partial [Vitis vinifera]           56   3e-07
XP_010657283.1 PREDICTED: H/ACA ribonucleoprotein complex non-co...    56   3e-07
CAN75706.1 hypothetical protein VITISV_031419 [Vitis vinifera]         54   2e-06
GAV87650.1 Gar1 domain-containing protein [Cephalotus follicularis]    53   4e-06
XP_017971208.1 PREDICTED: H/ACA ribonucleoprotein complex non-co...    52   8e-06

>KDO51554.1 hypothetical protein CISIN_1g005475mg [Citrus sinensis]
          Length = 695

 Score =  100 bits (249), Expect = 7e-23
 Identities = 45/65 (69%), Positives = 48/65 (73%)
 Frame = +2

Query: 56  FPNVFPTNCLLWPSQNYQQHPYQPTMNXXXXXXXXXXXXXPNVGLPGGPSHFFAGPSYAP 235
           FPNVFPTN L WPSQNYQQ PYQP MN             PNVGLPGGPS+FFAGP+YAP
Sbjct: 544 FPNVFPTNGLPWPSQNYQQPPYQPMMNCGLFLQQSSQMSLPNVGLPGGPSNFFAGPTYAP 603

Query: 236 WQGLV 250
           WQGL+
Sbjct: 604 WQGLL 608


>XP_006447313.1 hypothetical protein CICLE_v10014470mg [Citrus clementina]
           XP_006491626.1 PREDICTED: H/ACA ribonucleoprotein
           complex non-core subunit NAF1-like [Citrus sinensis]
           ESR60553.1 hypothetical protein CICLE_v10014470mg
           [Citrus clementina]
          Length = 695

 Score = 97.1 bits (240), Expect = 1e-21
 Identities = 44/65 (67%), Positives = 47/65 (72%)
 Frame = +2

Query: 56  FPNVFPTNCLLWPSQNYQQHPYQPTMNXXXXXXXXXXXXXPNVGLPGGPSHFFAGPSYAP 235
           FPNVFPTN L WPSQNYQQ PYQP MN             PNVGLPGGPS+FFAGP+YAP
Sbjct: 544 FPNVFPTNGLPWPSQNYQQPPYQPMMNCGLFLQQSSQMSLPNVGLPGGPSNFFAGPTYAP 603

Query: 236 WQGLV 250
           WQ L+
Sbjct: 604 WQCLL 608


>CBI28917.3 unnamed protein product, partial [Vitis vinifera]
          Length = 444

 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 27/67 (40%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = +2

Query: 56  FPNVFPTNCLLWPSQNYQQHPYQ---PTMNXXXXXXXXXXXXXPNVGLPGGPSHFFAGPS 226
           FPN FPT+ L WP QN+  HP+Q   P                PN  L  G ++FF  P+
Sbjct: 284 FPNSFPTDTLPWPPQNHHPHPFQMPMPNGMLFQQQFDPGHAAFPNAVLSSGQANFFMRPT 343

Query: 227 YAPWQGL 247
           Y PW GL
Sbjct: 344 YPPWPGL 350


>XP_010657283.1 PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1
           [Vitis vinifera]
          Length = 710

 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 27/67 (40%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = +2

Query: 56  FPNVFPTNCLLWPSQNYQQHPYQ---PTMNXXXXXXXXXXXXXPNVGLPGGPSHFFAGPS 226
           FPN FPT+ L WP QN+  HP+Q   P                PN  L  G ++FF  P+
Sbjct: 550 FPNSFPTDTLPWPPQNHHPHPFQMPMPNGMLFQQQFDPGHAAFPNAVLSSGQANFFMRPT 609

Query: 227 YAPWQGL 247
           Y PW GL
Sbjct: 610 YPPWPGL 616


>CAN75706.1 hypothetical protein VITISV_031419 [Vitis vinifera]
          Length = 641

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 26/67 (38%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
 Frame = +2

Query: 56  FPNVFPTNCLLWPSQNYQQHPYQ---PTMNXXXXXXXXXXXXXPNVGLPGGPSHFFAGPS 226
           FPN FP + L WP QN+  HP+Q   P                PN  L  G ++FF  P+
Sbjct: 478 FPNSFPRDTLPWPPQNHHPHPFQMPMPNGMLFQQQFDPGHAAFPNAVLSSGQANFFMRPT 537

Query: 227 YAPWQGL 247
           Y PW GL
Sbjct: 538 YPPWPGL 544


>GAV87650.1 Gar1 domain-containing protein [Cephalotus follicularis]
          Length = 705

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 30/68 (44%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
 Frame = +2

Query: 50  ASFPNVFPTNCLLWPSQNYQQHPYQPTMNXXXXXXXXXXXXX---PNVGLPGGPSHFFAG 220
           A FPN +P N +    QN  QHPYQ  M                 PNVG PGG S+FFA 
Sbjct: 556 AVFPNGYPNNGIPMFPQNLNQHPYQMPMQNLMPFHQQFDPSQRSLPNVGFPGGQSNFFAA 615

Query: 221 PSYAPWQG 244
           P+ APW G
Sbjct: 616 PN-APWLG 622


>XP_017971208.1 PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1
           [Theobroma cacao] EOX99339.1 Nuclear assembly factor 1,
           putative isoform 1 [Theobroma cacao] EOX99340.1 Nuclear
           assembly factor 1, putative isoform 1 [Theobroma cacao]
          Length = 678

 Score = 52.0 bits (123), Expect = 8e-06
 Identities = 30/75 (40%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
 Frame = +2

Query: 50  ASFPNVFPTNCLLWPSQNYQQHP---------YQPTMNXXXXXXXXXXXXXPNVGLPGGP 202
           A FPN FP   +   SQNYQQ P           P M              PNV LPGG 
Sbjct: 524 AIFPNRFPAEGMPLLSQNYQQQPNPLPTSGMPMPPMMPYQQQQFDPSMSTLPNVVLPGGQ 583

Query: 203 SHFFAGPSYAPWQGL 247
           ++ FAGP+ APW G+
Sbjct: 584 ANLFAGPACAPWLGI 598


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