BLASTX nr result
ID: Phellodendron21_contig00039263
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00039263
(309 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_024920245.1 MULTISPECIES: LysR family transcriptional regulat... 145 6e-41
WP_006023177.1 MULTISPECIES: LysR family transcriptional regulat... 145 6e-41
WP_037446932.1 LysR family transcriptional regulator [Skermanell... 67 5e-11
WP_002718307.1 LysR family transcriptional regulator [Afipia fel... 65 3e-10
WP_051390090.1 LysR family transcriptional regulator [Bradyrhizo... 63 1e-09
WP_018427526.1 LysR family transcriptional regulator [Hoeflea sp... 62 2e-09
WP_069881536.1 LysR family transcriptional regulator [Bosea sp. ... 62 3e-09
WP_055970671.1 LysR family transcriptional regulator [Aminobacte... 62 3e-09
WP_009338026.1 LysR family transcriptional regulator [Afipia sp.... 62 5e-09
SFU02491.1 transcriptional regulator, LysR family [Mesorhizobium... 62 5e-09
WP_046847007.1 LysR family transcriptional regulator [Hyphomicro... 60 1e-08
WP_013214867.1 LysR family transcriptional regulator [Hyphomicro... 60 1e-08
SEB82071.1 DNA-binding transcriptional regulator, LysR family [B... 60 2e-08
OJW59984.1 LysR family transcriptional regulator [Afipia sp. 64-13] 60 2e-08
WP_048758226.1 LysR family transcriptional regulator [Afipia fel... 60 2e-08
WP_069881771.1 hypothetical protein [Bosea sp. BIWAKO-01] GAU862... 58 2e-08
OJY04298.1 LysR family transcriptional regulator [Rhizobiales ba... 60 2e-08
SFP40750.1 DNA-binding transcriptional regulator, LysR family [S... 59 4e-08
WP_056025206.1 LysR family transcriptional regulator [Sphingomon... 59 4e-08
WP_055982119.1 MULTISPECIES: LysR family transcriptional regulat... 59 4e-08
>WP_024920245.1 MULTISPECIES: LysR family transcriptional regulator [Afipia]
Length = 313
Score = 145 bits (367), Expect = 6e-41
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = -3
Query: 307 GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLIAPKPSLTQ 128
GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLIAPKPSLTQ
Sbjct: 239 GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLIAPKPSLTQ 298
Query: 127 RHVPVPSRGRNDQL 86
RHVPVPSRGRNDQL
Sbjct: 299 RHVPVPSRGRNDQL 312
>WP_006023177.1 MULTISPECIES: LysR family transcriptional regulator [Rhizobiales]
ABS65524.1 transcriptional regulator, LysR family
[Xanthobacter autotrophicus Py2] ABS67900.1
transcriptional regulator, LysR family [Xanthobacter
autotrophicus Py2] EKS34566.1 hypothetical protein
HMPREF9695_04476 [Afipia broomeae ATCC 49717]
Length = 313
Score = 145 bits (367), Expect = 6e-41
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = -3
Query: 307 GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLIAPKPSLTQ 128
GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLIAPKPSLTQ
Sbjct: 239 GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLIAPKPSLTQ 298
Query: 127 RHVPVPSRGRNDQL 86
RHVPVPSRGRNDQL
Sbjct: 299 RHVPVPSRGRNDQL 312
>WP_037446932.1 LysR family transcriptional regulator [Skermanella stibiiresistens]
EWY41968.1 LysR family transcriptional regulator
[Skermanella stibiiresistens SB22]
Length = 298
Score = 67.0 bits (162), Expect = 5e-11
Identities = 35/52 (67%), Positives = 42/52 (80%)
Frame = -3
Query: 307 GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLI 152
GVTV+S LVV+ +LKAG+LV V +DLPKR+FFALRH E +TRA RA DLI
Sbjct: 241 GVTVISRLVVAGSLKAGTLVAVGIDLPKRQFFALRHGERYVTRAGRALRDLI 292
>WP_002718307.1 LysR family transcriptional regulator [Afipia felis] EKS30716.1
hypothetical protein HMPREF9697_03244 [Afipia felis ATCC
53690]
Length = 295
Score = 64.7 bits (156), Expect = 3e-10
Identities = 30/56 (53%), Positives = 41/56 (73%)
Frame = -3
Query: 307 GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLIAPKP 140
G TV+S +VV+N L +G+L ++K+ LP RRFF LRHKE +T+A+R F LI KP
Sbjct: 239 GATVISRIVVANLLNSGALTELKIPLPSRRFFRLRHKEHHVTQAEREFEKLIVEKP 294
>WP_051390090.1 LysR family transcriptional regulator [Bradyrhizobium sp. Ec3.3]
Length = 315
Score = 63.2 bits (152), Expect = 1e-09
Identities = 32/53 (60%), Positives = 42/53 (79%)
Frame = -3
Query: 307 GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLIA 149
GV V+S LVV+N++KAG+LV VK L RRF LRHKE ++RA++AFLD+IA
Sbjct: 239 GVAVISRLVVANSIKAGNLVPVKFPLLHRRFVVLRHKERYVSRAEQAFLDVIA 291
>WP_018427526.1 LysR family transcriptional regulator [Hoeflea sp. 108]
Length = 295
Score = 62.4 bits (150), Expect = 2e-09
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -3
Query: 307 GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLIAPKPS 137
GV V+S LV ALKAGSLV + LP+RRFF+LRHKE +TRA R FL L + S
Sbjct: 239 GVAVMSRLVAEGALKAGSLVSIPFALPRRRFFSLRHKERYLTRAAREFLALATGQAS 295
>WP_069881536.1 LysR family transcriptional regulator [Bosea sp. BIWAKO-01]
GAU85990.1 LysR family transcriptional regulator YeiE
[Bosea sp. BIWAKO-01]
Length = 304
Score = 62.4 bits (150), Expect = 3e-09
Identities = 32/64 (50%), Positives = 45/64 (70%)
Frame = -3
Query: 307 GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLIAPKPSLTQ 128
G +++S LVVSNAL++G+LV+V ++P RRF LRHKE RA +AF L+A +P+ T
Sbjct: 239 GASLMSRLVVSNALQSGALVEVAAEIPSRRFIMLRHKERYSGRAAQAFRALLAEEPAATG 298
Query: 127 RHVP 116
R P
Sbjct: 299 RAQP 302
>WP_055970671.1 LysR family transcriptional regulator [Aminobacter sp. Root100]
KQU75729.1 LysR family transcriptional regulator
[Aminobacter sp. Root100]
Length = 297
Score = 62.0 bits (149), Expect = 3e-09
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = -3
Query: 307 GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLIAPKP 140
GV V+S LV +LKAG+LV + +LP+RRFF+LRHKE TRA R FL L+ P
Sbjct: 239 GVAVMSRLVAEASLKAGTLVAIDFELPRRRFFSLRHKERYATRAAREFLGLVGAGP 294
>WP_009338026.1 LysR family transcriptional regulator [Afipia sp. 1NLS2] EFI52950.1
transcriptional regulator, LysR family [Afipia sp.
1NLS2]
Length = 295
Score = 61.6 bits (148), Expect = 5e-09
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = -3
Query: 307 GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLIAPKP 140
G T++S +VV+N L +G+LV++K+ +P RRFF LRHKE +T+A+R LIA P
Sbjct: 239 GATIISRIVVANLLTSGALVELKIPMPSRRFFLLRHKEHHVTQAERELEKLIADTP 294
>SFU02491.1 transcriptional regulator, LysR family [Mesorhizobium sp. YR577]
Length = 297
Score = 61.6 bits (148), Expect = 5e-09
Identities = 32/53 (60%), Positives = 39/53 (73%)
Frame = -3
Query: 307 GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLIA 149
G TV+S LV S A+ AG+LVQ+ + LPKRRF A+RHKE +TRA R FL L A
Sbjct: 239 GATVMSSLVTSAAVAAGTLVQMPVALPKRRFLAIRHKERHLTRAAREFLALAA 291
>WP_046847007.1 LysR family transcriptional regulator [Hyphomicrobium sp. GJ21]
CEJ86184.1 putative transcriptional regulatory protein,
LysR family [Hyphomicrobium sp. GJ21]
Length = 304
Score = 60.5 bits (145), Expect = 1e-08
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = -3
Query: 307 GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLIAPKPS 137
G+T++S LVV+ LKA +LV + + LP R+FFALRHKE TRA+R F+D+ K S
Sbjct: 239 GITILSRLVVAAPLKAKTLVALDVPLPARKFFALRHKERYFTRAERTFIDVATGKQS 295
>WP_013214867.1 LysR family transcriptional regulator [Hyphomicrobium
denitrificans] ADJ22652.1 transcriptional regulator,
LysR family [Hyphomicrobium denitrificans ATCC 51888]
Length = 304
Score = 60.5 bits (145), Expect = 1e-08
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = -3
Query: 307 GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLIAPKPS 137
G+T++S LVV+ LKA +LV + + LP R+FFALRHKE TRA+R F+D+ K S
Sbjct: 239 GITILSRLVVAAPLKAKTLVALDVPLPARKFFALRHKERYFTRAERTFIDVATGKQS 295
>SEB82071.1 DNA-binding transcriptional regulator, LysR family [Beijerinckia
sp. 28-YEA-48]
Length = 292
Score = 60.1 bits (144), Expect = 2e-08
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = -3
Query: 307 GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLI 152
G+ +S LVV A++AG L ++KLDLP+R FF LRHKE +RA +A LDLI
Sbjct: 236 GIAALSSLVVLRAVRAGMLAELKLDLPRRPFFGLRHKERYSSRAAKALLDLI 287
>OJW59984.1 LysR family transcriptional regulator [Afipia sp. 64-13]
Length = 294
Score = 60.1 bits (144), Expect = 2e-08
Identities = 29/53 (54%), Positives = 40/53 (75%)
Frame = -3
Query: 307 GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLIA 149
G T++S +VV+ LKAG+LV++KL +P RRFF LRHKE +T+A+R LIA
Sbjct: 239 GATIISRIVVATLLKAGTLVELKLQVPSRRFFLLRHKERYVTQAERELERLIA 291
>WP_048758226.1 LysR family transcriptional regulator [Afipia felis] CEG10649.1
HTH-type transcriptional activator CmpR [Afipia felis]
Length = 295
Score = 60.1 bits (144), Expect = 2e-08
Identities = 27/56 (48%), Positives = 40/56 (71%)
Frame = -3
Query: 307 GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLIAPKP 140
G T++S +VV+N L +G+LV++K+ +P RRFF LRHKE +T+A+R LI P
Sbjct: 239 GATIISRIVVANLLTSGALVELKIPMPSRRFFLLRHKEHHVTQAERELEKLITDTP 294
>WP_069881771.1 hypothetical protein [Bosea sp. BIWAKO-01] GAU86290.1 LysR family
transcriptional regulator YeiE [Bosea sp. BIWAKO-01]
Length = 143
Score = 57.8 bits (138), Expect = 2e-08
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Frame = -3
Query: 307 GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLI--APKPSL 134
G TVVS LVV+ AL+AG+ V V +P+RRF+AL+HKE + RA +AFL L+ +
Sbjct: 54 GATVVSRLVVAVALRAGTPVAVAATVPRRRFYALQHKERYVCRAAQAFLSLLRAGRRNGT 113
Query: 133 TQRHVPVPSRGRNDQL 86
QR +P R R + +
Sbjct: 114 GQRAHLIPDRSRPEPM 129
>OJY04298.1 LysR family transcriptional regulator [Rhizobiales bacterium 62-17]
Length = 291
Score = 59.7 bits (143), Expect = 2e-08
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = -3
Query: 307 GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLI 152
G+ +S LVV A++AG L ++KLDLP+R FF LRHKE +RA +A LDLI
Sbjct: 236 GIAALSSLVVLRAVRAGMLTELKLDLPRRPFFGLRHKERYSSRAAQALLDLI 287
>SFP40750.1 DNA-binding transcriptional regulator, LysR family [Sphingomonas
rubra]
Length = 290
Score = 58.9 bits (141), Expect = 4e-08
Identities = 32/52 (61%), Positives = 37/52 (71%)
Frame = -3
Query: 307 GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLI 152
GV V+S LVV+ ALKAG LV++ L+LP R F ALRHKE TRA A DLI
Sbjct: 234 GVAVLSRLVVARALKAGDLVELALELPDRAFHALRHKERYRTRAADALTDLI 285
>WP_056025206.1 LysR family transcriptional regulator [Sphingomonas sp. Leaf20]
KQM68872.1 LysR family transcriptional regulator
[Sphingomonas sp. Leaf20]
Length = 290
Score = 58.9 bits (141), Expect = 4e-08
Identities = 32/52 (61%), Positives = 37/52 (71%)
Frame = -3
Query: 307 GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLI 152
GV V+S LVV+ ALKAG LV++ L+LP R F ALRHKE TRA A DLI
Sbjct: 234 GVAVLSRLVVARALKAGDLVELALELPDRAFHALRHKERYRTRAADALTDLI 285
>WP_055982119.1 MULTISPECIES: LysR family transcriptional regulator [Sphingomonas]
KQM20069.1 LysR family transcriptional regulator
[Sphingomonas sp. Leaf5] KQM90942.1 LysR family
transcriptional regulator [Sphingomonas sp. Leaf24]
KQM94178.1 LysR family transcriptional regulator
[Sphingomonas sp. Leaf22] KQN00114.1 LysR family
transcriptional regulator [Sphingomonas sp. Leaf25]
KQO05196.1 LysR family transcriptional regulator
[Sphingomonas sp. Leaf242] KQT33739.1 LysR family
transcriptional regulator [Sphingomonas sp. Leaf412]
Length = 290
Score = 58.9 bits (141), Expect = 4e-08
Identities = 32/52 (61%), Positives = 37/52 (71%)
Frame = -3
Query: 307 GVTVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLI 152
GV V+S LVV+ ALKAG LV++ L+LP R F ALRHKE TRA A DLI
Sbjct: 234 GVAVLSRLVVARALKAGDLVELALELPDRAFHALRHKERYRTRAADALTDLI 285