BLASTX nr result

ID: Phellodendron21_contig00038333 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00038333
         (252 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KDO51554.1 hypothetical protein CISIN_1g005475mg [Citrus sinensis]     86   7e-18
XP_006447313.1 hypothetical protein CICLE_v10014470mg [Citrus cl...    83   1e-16
CBI28917.3 unnamed protein product, partial [Vitis vinifera]           53   3e-06
XP_010657283.1 PREDICTED: H/ACA ribonucleoprotein complex non-co...    53   3e-06

>KDO51554.1 hypothetical protein CISIN_1g005475mg [Citrus sinensis]
          Length = 695

 Score = 86.3 bits (212), Expect = 7e-18
 Identities = 40/62 (64%), Positives = 43/62 (69%)
 Frame = -2

Query: 188 VFPTNCLLWPSQNYQQHPYQPXXXXXXXXXXXXXXXLPNVGLPGGPSHFFAGPSYPPWQG 9
           VFPTN L WPSQNYQQ PYQP               LPNVGLPGGPS+FFAGP+Y PWQG
Sbjct: 547 VFPTNGLPWPSQNYQQPPYQPMMNCGLFLQQSSQMSLPNVGLPGGPSNFFAGPTYAPWQG 606

Query: 8   LV 3
           L+
Sbjct: 607 LL 608


>XP_006447313.1 hypothetical protein CICLE_v10014470mg [Citrus clementina]
           XP_006491626.1 PREDICTED: H/ACA ribonucleoprotein
           complex non-core subunit NAF1-like [Citrus sinensis]
           ESR60553.1 hypothetical protein CICLE_v10014470mg
           [Citrus clementina]
          Length = 695

 Score = 82.8 bits (203), Expect = 1e-16
 Identities = 39/62 (62%), Positives = 42/62 (67%)
 Frame = -2

Query: 188 VFPTNCLLWPSQNYQQHPYQPXXXXXXXXXXXXXXXLPNVGLPGGPSHFFAGPSYPPWQG 9
           VFPTN L WPSQNYQQ PYQP               LPNVGLPGGPS+FFAGP+Y PWQ 
Sbjct: 547 VFPTNGLPWPSQNYQQPPYQPMMNCGLFLQQSSQMSLPNVGLPGGPSNFFAGPTYAPWQC 606

Query: 8   LV 3
           L+
Sbjct: 607 LL 608


>CBI28917.3 unnamed protein product, partial [Vitis vinifera]
          Length = 444

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -2

Query: 185 FPTNCLLWPSQNYQQHPYQ---PXXXXXXXXXXXXXXXLPNVGLPGGPSHFFAGPSYPPW 15
           FPT+ L WP QN+  HP+Q   P                PN  L  G ++FF  P+YPPW
Sbjct: 288 FPTDTLPWPPQNHHPHPFQMPMPNGMLFQQQFDPGHAAFPNAVLSSGQANFFMRPTYPPW 347

Query: 14  QGL 6
            GL
Sbjct: 348 PGL 350


>XP_010657283.1 PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1
           [Vitis vinifera]
          Length = 710

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -2

Query: 185 FPTNCLLWPSQNYQQHPYQ---PXXXXXXXXXXXXXXXLPNVGLPGGPSHFFAGPSYPPW 15
           FPT+ L WP QN+  HP+Q   P                PN  L  G ++FF  P+YPPW
Sbjct: 554 FPTDTLPWPPQNHHPHPFQMPMPNGMLFQQQFDPGHAAFPNAVLSSGQANFFMRPTYPPW 613

Query: 14  QGL 6
            GL
Sbjct: 614 PGL 616


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