BLASTX nr result

ID: Phellodendron21_contig00038289 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00038289
         (391 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006485704.1 PREDICTED: uncharacterized ATP-dependent helicase...   107   2e-24
XP_015388065.1 PREDICTED: uncharacterized ATP-dependent helicase...   107   2e-24
XP_006440816.1 hypothetical protein CICLE_v10018555mg [Citrus cl...   105   5e-24

>XP_006485704.1 PREDICTED: uncharacterized ATP-dependent helicase YprA isoform X2
           [Citrus sinensis]
          Length = 1236

 Score =  107 bits (267), Expect = 2e-24
 Identities = 56/90 (62%), Positives = 63/90 (70%)
 Frame = +3

Query: 3   QIEKTGLFETSSSVTKETLNSNKFADSTYIDMMXXXXXXXXXXXXXVDSNKLEYSAAYTM 182
           QIEKTGLFETSS   KETL SNKFADSTY DMM             V ++K E + AY+M
Sbjct: 86  QIEKTGLFETSSDYAKETLISNKFADSTYSDMMQEFSSLHEEESNSVSNDKPECNNAYSM 145

Query: 183 PFGSINSDPLETKRKRGIDFDNQEGRPYGF 272
           PFG I+SDPLETKRKRG + D+Q GRPY F
Sbjct: 146 PFGCISSDPLETKRKRGAECDDQGGRPYDF 175



 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = -3

Query: 389 KRKRGIDFDNQEGRPYGFLWSLMQSTTKNALEGQN 285
           KRKRG + D+Q GRPY FLWS+M+ST+KNALE QN
Sbjct: 158 KRKRGAECDDQGGRPYDFLWSVMRSTSKNALERQN 192


>XP_015388065.1 PREDICTED: uncharacterized ATP-dependent helicase YprA isoform X1
           [Citrus sinensis]
          Length = 1240

 Score =  107 bits (267), Expect = 2e-24
 Identities = 56/90 (62%), Positives = 63/90 (70%)
 Frame = +3

Query: 3   QIEKTGLFETSSSVTKETLNSNKFADSTYIDMMXXXXXXXXXXXXXVDSNKLEYSAAYTM 182
           QIEKTGLFETSS   KETL SNKFADSTY DMM             V ++K E + AY+M
Sbjct: 86  QIEKTGLFETSSDYAKETLISNKFADSTYSDMMQEFSSLHEEESNSVSNDKPECNNAYSM 145

Query: 183 PFGSINSDPLETKRKRGIDFDNQEGRPYGF 272
           PFG I+SDPLETKRKRG + D+Q GRPY F
Sbjct: 146 PFGCISSDPLETKRKRGAECDDQGGRPYDF 175



 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = -3

Query: 389 KRKRGIDFDNQEGRPYGFLWSLMQSTTKNALEGQN 285
           KRKRG + D+Q GRPY FLWS+M+ST+KNALE QN
Sbjct: 158 KRKRGAECDDQGGRPYDFLWSVMRSTSKNALERQN 192


>XP_006440816.1 hypothetical protein CICLE_v10018555mg [Citrus clementina]
           ESR54056.1 hypothetical protein CICLE_v10018555mg
           [Citrus clementina]
          Length = 1216

 Score =  105 bits (263), Expect = 5e-24
 Identities = 55/90 (61%), Positives = 64/90 (71%)
 Frame = +3

Query: 3   QIEKTGLFETSSSVTKETLNSNKFADSTYIDMMXXXXXXXXXXXXXVDSNKLEYSAAYTM 182
           QIEKTGLFETSS   KETL SNKFADSTY DMM             V+++K E + AY+M
Sbjct: 86  QIEKTGLFETSSDYAKETLISNKFADSTYSDMMQEFSSLHEEESNSVNNDKPECNNAYSM 145

Query: 183 PFGSINSDPLETKRKRGIDFDNQEGRPYGF 272
           PFG I+SDPLETKRKRG + ++Q GRPY F
Sbjct: 146 PFGCISSDPLETKRKRGAECNDQGGRPYDF 175



 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = -3

Query: 389 KRKRGIDFDNQEGRPYGFLWSLMQSTTKNALEGQN 285
           KRKRG + ++Q GRPY FLWS+M+ST+KNALEGQN
Sbjct: 158 KRKRGAECNDQGGRPYDFLWSVMRSTSKNALEGQN 192


Top