BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00036715
         (932 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006477376.1 PREDICTED: DNA-directed RNA polymerase IV subunit...   278   1e-81
XP_006440521.1 hypothetical protein CICLE_v10018489mg [Citrus cl...   278   1e-81
XP_011650451.1 PREDICTED: DNA-directed RNA polymerase IV subunit...   207   1e-56
XP_011650450.1 PREDICTED: DNA-directed RNA polymerase IV subunit...   207   1e-56
XP_011650447.1 PREDICTED: DNA-directed RNA polymerase IV subunit...   207   1e-56
XP_016900630.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ...   207   1e-56
KDO63582.1 hypothetical protein CISIN_1g0005254mg, partial [Citr...   187   2e-53
XP_017973941.1 PREDICTED: DNA-directed RNA polymerase IV subunit...   196   6e-53
XP_007040111.2 PREDICTED: DNA-directed RNA polymerase IV subunit...   196   6e-53
EOY24612.1 DNA-directed RNA polymerase II subunit RPB1-B, putati...   196   6e-53
XP_010053343.1 PREDICTED: DNA-directed RNA polymerase IV subunit...   191   6e-51
XP_018820498.1 PREDICTED: DNA-directed RNA polymerase IV subunit...   189   2e-50
XP_018820497.1 PREDICTED: DNA-directed RNA polymerase IV subunit...   189   2e-50
XP_015871051.1 PREDICTED: DNA-directed RNA polymerase IV subunit...   182   1e-49
KDP25521.1 hypothetical protein JCGZ_20677 [Jatropha curcas]          186   2e-49
XP_012087018.1 PREDICTED: DNA-directed RNA polymerase IV subunit...   186   2e-49
XP_015901885.1 PREDICTED: DNA-directed RNA polymerase IV subunit...   182   4e-48
XP_015901884.1 PREDICTED: DNA-directed RNA polymerase IV subunit...   182   4e-48
GAV79426.1 RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1...   182   5e-48
XP_017609215.1 PREDICTED: DNA-directed RNA polymerase IV subunit...   177   3e-46

>XP_006477376.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Citrus sinensis]
            XP_006477377.1 PREDICTED: DNA-directed RNA polymerase IV
            subunit 1 [Citrus sinensis] XP_006477378.1 PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Citrus
            sinensis] XP_015385387.1 PREDICTED: DNA-directed RNA
            polymerase IV subunit 1 [Citrus sinensis]
          Length = 1443

 Score =  278 bits (712), Expect = 1e-81
 Identities = 144/197 (73%), Positives = 163/197 (82%), Gaps = 1/197 (0%)
 Frame = +3

Query: 3    PPVGTGGNFDIIYSGEGHTLSEPVDVYNLLSTLVSSNSKQNEKSEVWNAQGRMSYKYGDK 182
            P VGTGG+FDIIYSGEG TLS+PVDVYNLLST VSS  KQNEK +V  AQG +S K G K
Sbjct: 1249 PSVGTGGHFDIIYSGEGRTLSKPVDVYNLLSTPVSS--KQNEKLKVCKAQGLISDKCGAK 1306

Query: 183  FVDFS-KGLKKLDFNVIAREVLRKSWTFNDVQKLNYALKNILHKYSIGQRLSEIDKNTVT 359
            F DF+ KGL  LDF  I+R VLRKSWT+NDV +L+ ALK ILHKYSIGQRLSE DK TV 
Sbjct: 1307 FGDFAFKGLGNLDFETISRGVLRKSWTYNDVLRLSNALKKILHKYSIGQRLSEKDKTTVI 1366

Query: 360  RALYFHPRSKEKLGNEPSEIEVTNHPEYQNTRCFSLVRKDGTIEDFSYRKCVLGALEIVA 539
            RALYFHPR  EKLG EP +IEVT HPE+QN+RCFSLVR+DG+IEDFSY KCV+GALEI+A
Sbjct: 1367 RALYFHPRRNEKLGIEPPDIEVTYHPEHQNSRCFSLVREDGSIEDFSYHKCVIGALEIIA 1426

Query: 540  PGKVKSFQAKWKRLGTA 590
            P K + ++AKWKRLGTA
Sbjct: 1427 PEKAEIYRAKWKRLGTA 1443


>XP_006440521.1 hypothetical protein CICLE_v10018489mg [Citrus clementina] ESR53761.1
            hypothetical protein CICLE_v10018489mg [Citrus
            clementina]
          Length = 1443

 Score =  278 bits (712), Expect = 1e-81
 Identities = 144/197 (73%), Positives = 163/197 (82%), Gaps = 1/197 (0%)
 Frame = +3

Query: 3    PPVGTGGNFDIIYSGEGHTLSEPVDVYNLLSTLVSSNSKQNEKSEVWNAQGRMSYKYGDK 182
            P VGTGG+FDIIYSGEG TLS+PVDVYNLLST VSS  KQNEK +V  AQG +S K G K
Sbjct: 1249 PSVGTGGHFDIIYSGEGRTLSKPVDVYNLLSTPVSS--KQNEKLKVCKAQGLISDKCGAK 1306

Query: 183  FVDFS-KGLKKLDFNVIAREVLRKSWTFNDVQKLNYALKNILHKYSIGQRLSEIDKNTVT 359
            F DF+ KGL  LDF  I+R VLRKSWT+NDV +L+ ALK ILHKYSIGQRLSE DK TV 
Sbjct: 1307 FGDFAFKGLGNLDFETISRGVLRKSWTYNDVLRLSNALKKILHKYSIGQRLSEKDKTTVI 1366

Query: 360  RALYFHPRSKEKLGNEPSEIEVTNHPEYQNTRCFSLVRKDGTIEDFSYRKCVLGALEIVA 539
            RALYFHPR  EKLG EP +IEVT HPE+QN+RCFSLVR+DG+IEDFSY KCV+GALEI+A
Sbjct: 1367 RALYFHPRRNEKLGIEPPDIEVTYHPEHQNSRCFSLVREDGSIEDFSYHKCVIGALEIIA 1426

Query: 540  PGKVKSFQAKWKRLGTA 590
            P K + ++AKWKRLGTA
Sbjct: 1427 PEKAEIYRAKWKRLGTA 1443


>XP_011650451.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3
            [Cucumis sativus]
          Length = 1361

 Score =  207 bits (527), Expect = 1e-56
 Identities = 107/198 (54%), Positives = 143/198 (72%), Gaps = 8/198 (4%)
 Frame = +3

Query: 3    PPVGTGGNFDIIYSGEGHTLSEPVDVYNLL---STLVSSNSK-----QNEKSEVWNAQGR 158
            P +GTGG FDI+YSG+GH L++PVDVYNLL   ST    N+K     +N  SE ++AQ  
Sbjct: 1165 PSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNTKIESLDKNTISEKYSAQ-- 1222

Query: 159  MSYKYGDKFVDFSKGLKKLDFNVIAREVLRKSWTFNDVQKLNYALKNILHKYSIGQRLSE 338
            +  K G   +   KGLK+LD   +++ +LRK  T ND+QKL++AL+ ILHKYS+ +RL+E
Sbjct: 1223 LMLKNGGSTI---KGLKRLDS--VSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNE 1277

Query: 339  IDKNTVTRALYFHPRSKEKLGNEPSEIEVTNHPEYQNTRCFSLVRKDGTIEDFSYRKCVL 518
            +DK+T+  ALYFHP   EK+G    +I+V +H +YQNTRCF L+R DGT EDFSY KCVL
Sbjct: 1278 VDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVL 1337

Query: 519  GALEIVAPGKVKSFQAKW 572
            GALEI+AP +VK +Q+KW
Sbjct: 1338 GALEIIAPHRVKGYQSKW 1355


>XP_011650450.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
            [Cucumis sativus]
          Length = 1362

 Score =  207 bits (527), Expect = 1e-56
 Identities = 107/198 (54%), Positives = 143/198 (72%), Gaps = 8/198 (4%)
 Frame = +3

Query: 3    PPVGTGGNFDIIYSGEGHTLSEPVDVYNLL---STLVSSNSK-----QNEKSEVWNAQGR 158
            P +GTGG FDI+YSG+GH L++PVDVYNLL   ST    N+K     +N  SE ++AQ  
Sbjct: 1166 PSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNTKIESLDKNTISEKYSAQ-- 1223

Query: 159  MSYKYGDKFVDFSKGLKKLDFNVIAREVLRKSWTFNDVQKLNYALKNILHKYSIGQRLSE 338
            +  K G   +   KGLK+LD   +++ +LRK  T ND+QKL++AL+ ILHKYS+ +RL+E
Sbjct: 1224 LMLKNGGSTI---KGLKRLDS--VSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNE 1278

Query: 339  IDKNTVTRALYFHPRSKEKLGNEPSEIEVTNHPEYQNTRCFSLVRKDGTIEDFSYRKCVL 518
            +DK+T+  ALYFHP   EK+G    +I+V +H +YQNTRCF L+R DGT EDFSY KCVL
Sbjct: 1279 VDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVL 1338

Query: 519  GALEIVAPGKVKSFQAKW 572
            GALEI+AP +VK +Q+KW
Sbjct: 1339 GALEIIAPHRVKGYQSKW 1356


>XP_011650447.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Cucumis sativus] XP_011650448.1 PREDICTED: DNA-directed
            RNA polymerase IV subunit 1 isoform X1 [Cucumis sativus]
            XP_011650449.1 PREDICTED: DNA-directed RNA polymerase IV
            subunit 1 isoform X1 [Cucumis sativus] KGN55963.1
            hypothetical protein Csa_3G039340 [Cucumis sativus]
          Length = 1483

 Score =  207 bits (527), Expect = 1e-56
 Identities = 107/198 (54%), Positives = 143/198 (72%), Gaps = 8/198 (4%)
 Frame = +3

Query: 3    PPVGTGGNFDIIYSGEGHTLSEPVDVYNLL---STLVSSNSK-----QNEKSEVWNAQGR 158
            P +GTGG FDI+YSG+GH L++PVDVYNLL   ST    N+K     +N  SE ++AQ  
Sbjct: 1287 PSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNTKIESLDKNTISEKYSAQ-- 1344

Query: 159  MSYKYGDKFVDFSKGLKKLDFNVIAREVLRKSWTFNDVQKLNYALKNILHKYSIGQRLSE 338
            +  K G   +   KGLK+LD   +++ +LRK  T ND+QKL++AL+ ILHKYS+ +RL+E
Sbjct: 1345 LMLKNGGSTI---KGLKRLDS--VSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNE 1399

Query: 339  IDKNTVTRALYFHPRSKEKLGNEPSEIEVTNHPEYQNTRCFSLVRKDGTIEDFSYRKCVL 518
            +DK+T+  ALYFHP   EK+G    +I+V +H +YQNTRCF L+R DGT EDFSY KCVL
Sbjct: 1400 VDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVL 1459

Query: 519  GALEIVAPGKVKSFQAKW 572
            GALEI+AP +VK +Q+KW
Sbjct: 1460 GALEIIAPHRVKGYQSKW 1477


>XP_016900630.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase IV
            subunit 1 [Cucumis melo]
          Length = 1495

 Score =  207 bits (527), Expect = 1e-56
 Identities = 106/195 (54%), Positives = 141/195 (72%), Gaps = 5/195 (2%)
 Frame = +3

Query: 3    PPVGTGGNFDIIYSGEGHTLSEPVDVYNLLSTLVSSNSKQNEKSEVWNAQGRMSYKYGDK 182
            P +GTGG FDI+YSG+GH L++PVDVYNLL    S+  KQN K E  + +  +S KY  +
Sbjct: 1299 PSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQ-STCEKQNAKIESVD-KNNISEKYSAQ 1356

Query: 183  FV-----DFSKGLKKLDFNVIAREVLRKSWTFNDVQKLNYALKNILHKYSIGQRLSEIDK 347
             V        KGLK+LD   +++ +LRK  T ND+QKL++AL+ ILHKYS+ +RL+E+DK
Sbjct: 1357 LVLKNGGSTIKGLKRLDS--VSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDK 1414

Query: 348  NTVTRALYFHPRSKEKLGNEPSEIEVTNHPEYQNTRCFSLVRKDGTIEDFSYRKCVLGAL 527
            +T+  ALYFHP   EK+G    +I+V +H +YQNTRCF L+R DGT EDFSY KCVLGAL
Sbjct: 1415 STLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGAL 1474

Query: 528  EIVAPGKVKSFQAKW 572
            EI+AP +VK +Q+KW
Sbjct: 1475 EIIAPHRVKGYQSKW 1489


>KDO63582.1 hypothetical protein CISIN_1g0005254mg, partial [Citrus sinensis]
          Length = 363

 Score =  187 bits (476), Expect = 2e-53
 Identities = 102/141 (72%), Positives = 112/141 (79%), Gaps = 1/141 (0%)
 Frame = +3

Query: 3   PPVGTGGNFDIIYSGEGHTLSEPVDVYNLLSTLVSSNSKQNEKSEVWNAQGRMSYKYGDK 182
           P VGTGG+FDIIYSGEG TLS+PVDVYNLLST VSS  KQNEK +V  AQG +S K G K
Sbjct: 225 PSVGTGGHFDIIYSGEGRTLSKPVDVYNLLSTPVSS--KQNEKLKVCKAQGLISDKCGAK 282

Query: 183 FVDFS-KGLKKLDFNVIAREVLRKSWTFNDVQKLNYALKNILHKYSIGQRLSEIDKNTVT 359
           F DF+ KGL  LDF  I+R VLRKSWT+NDV +L+ ALK ILHKYSIGQRLSE DK TV 
Sbjct: 283 FGDFAFKGLGNLDFETISRGVLRKSWTYNDVLRLSNALKKILHKYSIGQRLSEKDKTTVI 342

Query: 360 RALYFHPRSKEKLGNEPSEIE 422
           RALYFHPR  EKLG EP +IE
Sbjct: 343 RALYFHPRRNEKLGIEPPDIE 363


>XP_017973941.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
            [Theobroma cacao]
          Length = 1343

 Score =  196 bits (499), Expect = 6e-53
 Identities = 106/200 (53%), Positives = 136/200 (68%), Gaps = 5/200 (2%)
 Frame = +3

Query: 3    PPVGTGGNFDIIYSGEGHTLSEPVDVYNLLSTLVSSNSKQNEKSEVWNAQGRMSYKYGDK 182
            P +GTGG FDIIYS +   L+EPVDVY LL + +SS  KQ+ + EV  A    S KYG  
Sbjct: 1146 PHIGTGGQFDIIYSVKDQRLAEPVDVYKLLGSSISSQ-KQDVEFEVPKALNFKSEKYGSL 1204

Query: 183  FVDF-----SKGLKKLDFNVIAREVLRKSWTFNDVQKLNYALKNILHKYSIGQRLSEIDK 347
             +D      S+ LKK++     R + R+  T +D+Q+L+ AL+NILHKY I  RLSE D 
Sbjct: 1205 LIDALGDSASEELKKIETK--RRSIWRELLTLDDIQRLSRALRNILHKYPIDHRLSEADW 1262

Query: 348  NTVTRALYFHPRSKEKLGNEPSEIEVTNHPEYQNTRCFSLVRKDGTIEDFSYRKCVLGAL 527
            NT+  ALYFHPR  EK+G+   EI+V  HPE+ N RCFSLVR DGTI DFSY KCVLGAL
Sbjct: 1263 NTLMMALYFHPRRDEKIGSGAQEIKVGYHPEHANARCFSLVRTDGTIVDFSYHKCVLGAL 1322

Query: 528  EIVAPGKVKSFQAKWKRLGT 587
            EI+AP + KS+++KW + G+
Sbjct: 1323 EIIAPHRAKSYKSKWLQSGS 1342


>XP_007040111.2 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Theobroma cacao]
          Length = 1484

 Score =  196 bits (499), Expect = 6e-53
 Identities = 106/200 (53%), Positives = 136/200 (68%), Gaps = 5/200 (2%)
 Frame = +3

Query: 3    PPVGTGGNFDIIYSGEGHTLSEPVDVYNLLSTLVSSNSKQNEKSEVWNAQGRMSYKYGDK 182
            P +GTGG FDIIYS +   L+EPVDVY LL + +SS  KQ+ + EV  A    S KYG  
Sbjct: 1287 PHIGTGGQFDIIYSVKDQRLAEPVDVYKLLGSSISSQ-KQDVEFEVPKALNFKSEKYGSL 1345

Query: 183  FVDF-----SKGLKKLDFNVIAREVLRKSWTFNDVQKLNYALKNILHKYSIGQRLSEIDK 347
             +D      S+ LKK++     R + R+  T +D+Q+L+ AL+NILHKY I  RLSE D 
Sbjct: 1346 LIDALGDSASEELKKIETK--RRSIWRELLTLDDIQRLSRALRNILHKYPIDHRLSEADW 1403

Query: 348  NTVTRALYFHPRSKEKLGNEPSEIEVTNHPEYQNTRCFSLVRKDGTIEDFSYRKCVLGAL 527
            NT+  ALYFHPR  EK+G+   EI+V  HPE+ N RCFSLVR DGTI DFSY KCVLGAL
Sbjct: 1404 NTLMMALYFHPRRDEKIGSGAQEIKVGYHPEHANARCFSLVRTDGTIVDFSYHKCVLGAL 1463

Query: 528  EIVAPGKVKSFQAKWKRLGT 587
            EI+AP + KS+++KW + G+
Sbjct: 1464 EIIAPHRAKSYKSKWLQSGS 1483


>EOY24612.1 DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
            cacao]
          Length = 1484

 Score =  196 bits (499), Expect = 6e-53
 Identities = 106/200 (53%), Positives = 136/200 (68%), Gaps = 5/200 (2%)
 Frame = +3

Query: 3    PPVGTGGNFDIIYSGEGHTLSEPVDVYNLLSTLVSSNSKQNEKSEVWNAQGRMSYKYGDK 182
            P +GTGG FDIIYS +   L+EPVDVY LL + +SS  KQ+ + EV  A    S KYG  
Sbjct: 1287 PHIGTGGQFDIIYSVKDQRLAEPVDVYKLLGSSISSQ-KQDVEFEVPKALNFKSEKYGSL 1345

Query: 183  FVDF-----SKGLKKLDFNVIAREVLRKSWTFNDVQKLNYALKNILHKYSIGQRLSEIDK 347
             +D      S+ LKK++     R + R+  T +D+Q+L+ AL+NILHKY I  RLSE D 
Sbjct: 1346 LIDALGDSASEELKKIETK--RRSIWRELLTLDDIQRLSRALRNILHKYPIDHRLSEADW 1403

Query: 348  NTVTRALYFHPRSKEKLGNEPSEIEVTNHPEYQNTRCFSLVRKDGTIEDFSYRKCVLGAL 527
            NT+  ALYFHPR  EK+G+   EI+V  HPE+ N RCFSLVR DGTI DFSY KCVLGAL
Sbjct: 1404 NTLMMALYFHPRRDEKIGSGAQEIKVGYHPEHANARCFSLVRTDGTIVDFSYHKCVLGAL 1463

Query: 528  EIVAPGKVKSFQAKWKRLGT 587
            EI+AP + KS+++KW + G+
Sbjct: 1464 EIIAPHRAKSYKSKWLQSGS 1483


>XP_010053343.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
            grandis] XP_010053344.1 PREDICTED: DNA-directed RNA
            polymerase IV subunit 1 [Eucalyptus grandis]
            XP_010053346.1 PREDICTED: DNA-directed RNA polymerase IV
            subunit 1 [Eucalyptus grandis] XP_010053347.1 PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
            grandis] XP_018727819.1 PREDICTED: DNA-directed RNA
            polymerase IV subunit 1 [Eucalyptus grandis] KCW77618.1
            hypothetical protein EUGRSUZ_D01929 [Eucalyptus grandis]
          Length = 1473

 Score =  191 bits (484), Expect = 6e-51
 Identities = 103/193 (53%), Positives = 132/193 (68%), Gaps = 3/193 (1%)
 Frame = +3

Query: 3    PPVGTGGNFDIIYSGEGHTLSEPVDVYNLLSTLVSSNSKQNEKSEVWNAQGRMSYKYGDK 182
            P +GTGG F+IIYSG+GH L++P  VYNLL   VSS ++QN K EV NA   +    G +
Sbjct: 1277 PSLGTGGLFEIIYSGKGHELAKPESVYNLLGNKVSS-TQQNIKLEVPNAGSHVPDTCGAE 1335

Query: 183  FVD---FSKGLKKLDFNVIAREVLRKSWTFNDVQKLNYALKNILHKYSIGQRLSEIDKNT 353
            FV     SK LKKL+ N   + + RK  TFND+QKL+  LK IL+KY I   L E +K+ 
Sbjct: 1336 FVQADSVSKVLKKLEIN---KSLFRKFITFNDIQKLSLELKKILYKYPIDHHLGEQEKSI 1392

Query: 354  VTRALYFHPRSKEKLGNEPSEIEVTNHPEYQNTRCFSLVRKDGTIEDFSYRKCVLGALEI 533
            V  AL FHPR KEK+G     I+V +HP++Q++RCF LVR DG  EDFSY KCVLGALEI
Sbjct: 1393 VMMALKFHPRGKEKIGTGARNIKVGHHPKHQDSRCFMLVRDDGMAEDFSYHKCVLGALEI 1452

Query: 534  VAPGKVKSFQAKW 572
            +AP + K++Q+KW
Sbjct: 1453 IAPQRAKTYQSKW 1465


>XP_018820498.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
            [Juglans regia] XP_018820499.1 PREDICTED: DNA-directed
            RNA polymerase IV subunit 1 isoform X2 [Juglans regia]
            XP_018820500.1 PREDICTED: DNA-directed RNA polymerase IV
            subunit 1 isoform X2 [Juglans regia] XP_018820501.1
            PREDICTED: DNA-directed RNA polymerase IV subunit 1
            isoform X2 [Juglans regia]
          Length = 1475

 Score =  189 bits (481), Expect = 2e-50
 Identities = 100/198 (50%), Positives = 138/198 (69%), Gaps = 8/198 (4%)
 Frame = +3

Query: 3    PPVGTGGNFDIIYSGEGHTLSEPVDVYNLLSTLVSSNSKQNEKSEVWNAQGRMSYKYGDK 182
            P  GTG +FDI+YSG+G+ L++P DVYNLL + + S+ +QN K++       +S K G +
Sbjct: 1275 PSTGTGSHFDIMYSGKGYELAQPEDVYNLLGSQIISD-EQNVKTKTPVVHHSISAKCGTQ 1333

Query: 183  FVD-----FSKGLKKLDFNVIAREVLRKSWTFNDVQKLNYALKNILHKYSIGQRLSEIDK 347
            FV        K LKK++   I++ +LR   T NDV KL++ LK ILHKY I  RL E DK
Sbjct: 1334 FVYKYGGLAPKELKKMES--ISKSLLRSVLTSNDVHKLSHVLKGILHKYPINHRLDEKDK 1391

Query: 348  NTVTRALYFHPRSKEKLGN---EPSEIEVTNHPEYQNTRCFSLVRKDGTIEDFSYRKCVL 518
            +T+  ALYFHPR  EK+G+   +  +I+V++HP+YQNTRCF LVR DGT+EDFSY KCVL
Sbjct: 1392 STLMMALYFHPRRDEKIGSGAQDIKDIKVSSHPKYQNTRCFELVRMDGTVEDFSYHKCVL 1451

Query: 519  GALEIVAPGKVKSFQAKW 572
            GALE++ P + KS+++KW
Sbjct: 1452 GALEMIDPRRAKSYKSKW 1469


>XP_018820497.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Juglans regia]
          Length = 1544

 Score =  189 bits (481), Expect = 2e-50
 Identities = 100/198 (50%), Positives = 138/198 (69%), Gaps = 8/198 (4%)
 Frame = +3

Query: 3    PPVGTGGNFDIIYSGEGHTLSEPVDVYNLLSTLVSSNSKQNEKSEVWNAQGRMSYKYGDK 182
            P  GTG +FDI+YSG+G+ L++P DVYNLL + + S+ +QN K++       +S K G +
Sbjct: 1344 PSTGTGSHFDIMYSGKGYELAQPEDVYNLLGSQIISD-EQNVKTKTPVVHHSISAKCGTQ 1402

Query: 183  FVD-----FSKGLKKLDFNVIAREVLRKSWTFNDVQKLNYALKNILHKYSIGQRLSEIDK 347
            FV        K LKK++   I++ +LR   T NDV KL++ LK ILHKY I  RL E DK
Sbjct: 1403 FVYKYGGLAPKELKKMES--ISKSLLRSVLTSNDVHKLSHVLKGILHKYPINHRLDEKDK 1460

Query: 348  NTVTRALYFHPRSKEKLGN---EPSEIEVTNHPEYQNTRCFSLVRKDGTIEDFSYRKCVL 518
            +T+  ALYFHPR  EK+G+   +  +I+V++HP+YQNTRCF LVR DGT+EDFSY KCVL
Sbjct: 1461 STLMMALYFHPRRDEKIGSGAQDIKDIKVSSHPKYQNTRCFELVRMDGTVEDFSYHKCVL 1520

Query: 519  GALEIVAPGKVKSFQAKW 572
            GALE++ P + KS+++KW
Sbjct: 1521 GALEMIDPRRAKSYKSKW 1538


>XP_015871051.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Ziziphus
           jujuba]
          Length = 564

 Score =  182 bits (463), Expect = 1e-49
 Identities = 99/199 (49%), Positives = 134/199 (67%), Gaps = 5/199 (2%)
 Frame = +3

Query: 3   PPVGTGGNFDIIYSGEGHTLSEPVDVYNLLSTLVSSNSKQNEKSEVWNAQGRMSYKYGDK 182
           P +GTGG FDIIYSG+GH +++P DVY+LL + +SS+ KQNE  ++   Q   S KY  +
Sbjct: 364 PAMGTGGLFDIIYSGKGHEIAKPADVYDLLGSQISSD-KQNE-IKMSTDQNHTSNKYDTQ 421

Query: 183 FV-----DFSKGLKKLDFNVIAREVLRKSWTFNDVQKLNYALKNILHKYSIGQRLSEIDK 347
           F+       SKG  KL    IA+  +RK +T  DVQ L++ LK+ILHKY I  +L + DK
Sbjct: 422 FLYGFGGSVSKGFTKLG---IAKSFIRKFFTPKDVQNLSHKLKHILHKYPIDHKLDDADK 478

Query: 348 NTVTRALYFHPRSKEKLGNEPSEIEVTNHPEYQNTRCFSLVRKDGTIEDFSYRKCVLGAL 527
           +T+   LYFHPR   K+G    +I+V NHP+++N+RCF L+R DGT EDFSY KCV GAL
Sbjct: 479 STLMMTLYFHPRRDVKVGAGIQDIKVVNHPDHENSRCFMLLRTDGTSEDFSYHKCVHGAL 538

Query: 528 EIVAPGKVKSFQAKWKRLG 584
           EIVAP + KS+ +K  + G
Sbjct: 539 EIVAPVRAKSYWSKLSQQG 557


>KDP25521.1 hypothetical protein JCGZ_20677 [Jatropha curcas]
          Length = 942

 Score =  186 bits (472), Expect = 2e-49
 Identities = 104/194 (53%), Positives = 134/194 (69%), Gaps = 5/194 (2%)
 Frame = +3

Query: 3    PPVGTGGNFDIIYSGEGHTLSEPVDVYNLLSTLVSSNSKQNEKSEVWNAQGRMSYKYGDK 182
            PPVGTG  FDIIYSG+G  LS+PVDVY+LL + +S+  KQN + EV   +G  S KYG +
Sbjct: 753  PPVGTG-QFDIIYSGKGFELSKPVDVYDLLGSQMSAE-KQNYEFEVPFTRGCKSDKYGPQ 810

Query: 183  FV----DF-SKGLKKLDFNVIAREVLRKSWTFNDVQKLNYALKNILHKYSIGQRLSEIDK 347
            FV    D+  KG           E LR+  T+ND+ +L+ AL  IL+KY + Q+L+E DK
Sbjct: 811  FVYNTDDYVPKG---------TLERLRRLLTYNDIHRLSQALSKILNKYPVDQQLNEADK 861

Query: 348  NTVTRALYFHPRSKEKLGNEPSEIEVTNHPEYQNTRCFSLVRKDGTIEDFSYRKCVLGAL 527
             T+  ALYFHPR  EK+G+   +I+V NHPEYQ +RCFS+VR DGTIEDFSYRKCV GAL
Sbjct: 862  CTLMSALYFHPRRDEKIGSGAQDIKVVNHPEYQGSRCFSVVRTDGTIEDFSYRKCVHGAL 921

Query: 528  EIVAPGKVKSFQAK 569
            EI+AP K + ++ K
Sbjct: 922  EIIAPQKARRYREK 935


>XP_012087018.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Jatropha curcas]
          Length = 1453

 Score =  186 bits (472), Expect = 2e-49
 Identities = 104/194 (53%), Positives = 134/194 (69%), Gaps = 5/194 (2%)
 Frame = +3

Query: 3    PPVGTGGNFDIIYSGEGHTLSEPVDVYNLLSTLVSSNSKQNEKSEVWNAQGRMSYKYGDK 182
            PPVGTG  FDIIYSG+G  LS+PVDVY+LL + +S+  KQN + EV   +G  S KYG +
Sbjct: 1264 PPVGTG-QFDIIYSGKGFELSKPVDVYDLLGSQMSAE-KQNYEFEVPFTRGCKSDKYGPQ 1321

Query: 183  FV----DF-SKGLKKLDFNVIAREVLRKSWTFNDVQKLNYALKNILHKYSIGQRLSEIDK 347
            FV    D+  KG           E LR+  T+ND+ +L+ AL  IL+KY + Q+L+E DK
Sbjct: 1322 FVYNTDDYVPKG---------TLERLRRLLTYNDIHRLSQALSKILNKYPVDQQLNEADK 1372

Query: 348  NTVTRALYFHPRSKEKLGNEPSEIEVTNHPEYQNTRCFSLVRKDGTIEDFSYRKCVLGAL 527
             T+  ALYFHPR  EK+G+   +I+V NHPEYQ +RCFS+VR DGTIEDFSYRKCV GAL
Sbjct: 1373 CTLMSALYFHPRRDEKIGSGAQDIKVVNHPEYQGSRCFSVVRTDGTIEDFSYRKCVHGAL 1432

Query: 528  EIVAPGKVKSFQAK 569
            EI+AP K + ++ K
Sbjct: 1433 EIIAPQKARRYREK 1446


>XP_015901885.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
            [Ziziphus jujuba]
          Length = 1321

 Score =  182 bits (463), Expect = 4e-48
 Identities = 99/199 (49%), Positives = 134/199 (67%), Gaps = 5/199 (2%)
 Frame = +3

Query: 3    PPVGTGGNFDIIYSGEGHTLSEPVDVYNLLSTLVSSNSKQNEKSEVWNAQGRMSYKYGDK 182
            P +GTGG FDIIYSG+GH +++P DVY+LL + +SS+ KQNE  ++   Q   S KY  +
Sbjct: 1121 PAMGTGGLFDIIYSGKGHEIAKPADVYDLLGSQISSD-KQNE-IKMSTDQNHTSNKYDTQ 1178

Query: 183  FV-----DFSKGLKKLDFNVIAREVLRKSWTFNDVQKLNYALKNILHKYSIGQRLSEIDK 347
            F+       SKG  KL    IA+  +RK +T  DVQ L++ LK+ILHKY I  +L + DK
Sbjct: 1179 FLYGFGGSVSKGFTKLG---IAKSFIRKFFTPKDVQNLSHKLKHILHKYPIDHKLDDADK 1235

Query: 348  NTVTRALYFHPRSKEKLGNEPSEIEVTNHPEYQNTRCFSLVRKDGTIEDFSYRKCVLGAL 527
            +T+   LYFHPR   K+G    +I+V NHP+++N+RCF L+R DGT EDFSY KCV GAL
Sbjct: 1236 STLMMTLYFHPRRDVKVGAGIQDIKVVNHPDHENSRCFMLLRTDGTSEDFSYHKCVHGAL 1295

Query: 528  EIVAPGKVKSFQAKWKRLG 584
            EIVAP + KS+ +K  + G
Sbjct: 1296 EIVAPVRAKSYWSKLSQQG 1314


>XP_015901884.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Ziziphus jujuba]
          Length = 1455

 Score =  182 bits (463), Expect = 4e-48
 Identities = 99/199 (49%), Positives = 134/199 (67%), Gaps = 5/199 (2%)
 Frame = +3

Query: 3    PPVGTGGNFDIIYSGEGHTLSEPVDVYNLLSTLVSSNSKQNEKSEVWNAQGRMSYKYGDK 182
            P +GTGG FDIIYSG+GH +++P DVY+LL + +SS+ KQNE  ++   Q   S KY  +
Sbjct: 1255 PAMGTGGLFDIIYSGKGHEIAKPADVYDLLGSQISSD-KQNE-IKMSTDQNHTSNKYDTQ 1312

Query: 183  FV-----DFSKGLKKLDFNVIAREVLRKSWTFNDVQKLNYALKNILHKYSIGQRLSEIDK 347
            F+       SKG  KL    IA+  +RK +T  DVQ L++ LK+ILHKY I  +L + DK
Sbjct: 1313 FLYGFGGSVSKGFTKLG---IAKSFIRKFFTPKDVQNLSHKLKHILHKYPIDHKLDDADK 1369

Query: 348  NTVTRALYFHPRSKEKLGNEPSEIEVTNHPEYQNTRCFSLVRKDGTIEDFSYRKCVLGAL 527
            +T+   LYFHPR   K+G    +I+V NHP+++N+RCF L+R DGT EDFSY KCV GAL
Sbjct: 1370 STLMMTLYFHPRRDVKVGAGIQDIKVVNHPDHENSRCFMLLRTDGTSEDFSYHKCVHGAL 1429

Query: 528  EIVAPGKVKSFQAKWKRLG 584
            EIVAP + KS+ +K  + G
Sbjct: 1430 EIVAPVRAKSYWSKLSQQG 1448


>GAV79426.1 RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1_3
            domain-containing protein/RNA_pol_Rpb1_1
            domain-containing protein/RNA_pol_Rpb1_4
            domain-containing protein/DUF3223 domain-containing
            protein, partial [Cephalotus follicularis]
          Length = 1513

 Score =  182 bits (462), Expect = 5e-48
 Identities = 100/196 (51%), Positives = 132/196 (67%), Gaps = 6/196 (3%)
 Frame = +3

Query: 3    PPVGTGGNFDIIYSGE-GHTLSEPVDVYNLLSTLVSSNSKQNEKSEVWNAQGRMSYKYGD 179
            P VGTGG+F+II+SGE  H L++PVDVY LL + +SS  +QN + E  N    +  KYG 
Sbjct: 1320 PSVGTGGHFEIIFSGEEDHKLTKPVDVYELLGSQISS--EQNLEIESPNTWNHVPEKYGA 1377

Query: 180  KFV-----DFSKGLKKLDFNVIAREVLRKSWTFNDVQKLNYALKNILHKYSIGQRLSEID 344
             +        S+GL K +       V++   T  D++ L++ALKNILHKY I  +L+E D
Sbjct: 1378 PWSRKYNGPASRGLTKWE------TVIKSFITEKDIRNLSHALKNILHKYPIDHQLNEWD 1431

Query: 345  KNTVTRALYFHPRSKEKLGNEPSEIEVTNHPEYQNTRCFSLVRKDGTIEDFSYRKCVLGA 524
            K  + RAL+FHPRS+EK+G+   EI+V  HP +QNTRCF LVR DGTIEDFSY KCVLGA
Sbjct: 1432 KTILMRALHFHPRSEEKIGSGAHEIKVAFHPAHQNTRCFHLVRTDGTIEDFSYHKCVLGA 1491

Query: 525  LEIVAPGKVKSFQAKW 572
            L I+AP K K +++KW
Sbjct: 1492 LRIIAPQKAKMYKSKW 1507


>XP_017609215.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Gossypium
            arboreum]
          Length = 1469

 Score =  177 bits (449), Expect = 3e-46
 Identities = 92/194 (47%), Positives = 125/194 (64%)
 Frame = +3

Query: 3    PPVGTGGNFDIIYSGEGHTLSEPVDVYNLLSTLVSSNSKQNEKSEVWNAQGRMSYKYGDK 182
            P +GTG  FDI+YS +   ++EPVDVY LL   +  + KQ+ + EV  A    S KY  +
Sbjct: 1275 PRIGTGAQFDILYSMKDERITEPVDVYKLLGN-IDGSQKQDVEFEVPKACNFKSEKYVSE 1333

Query: 183  FVDFSKGLKKLDFNVIAREVLRKSWTFNDVQKLNYALKNILHKYSIGQRLSEIDKNTVTR 362
             +D            I  ++LR+  T ND+Q+L+  LK+ILHK  IG RLS  D N+   
Sbjct: 1334 LMDALGDSAFERLKNIETKILREFLTLNDIQRLSRTLKDILHKSPIGHRLSGADWNSAMM 1393

Query: 363  ALYFHPRSKEKLGNEPSEIEVTNHPEYQNTRCFSLVRKDGTIEDFSYRKCVLGALEIVAP 542
            ALYFHPR  EK+G+   EI+V  HPE++N+RCF L R DGTI DFSY KCV+GALE++AP
Sbjct: 1394 ALYFHPRRDEKVGSGAQEIKVGYHPEHKNSRCFLLARTDGTIVDFSYHKCVIGALEVIAP 1453

Query: 543  GKVKSFQAKWKRLG 584
             KV+S+++KW + G
Sbjct: 1454 DKVQSYKSKWSQSG 1467