BLASTX nr result
ID: Phellodendron21_contig00036425
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00036425
(1288 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006451272.1 hypothetical protein CICLE_v10007331mg [Citrus cl... 670 0.0
KDO66531.1 hypothetical protein CISIN_1g001771mg [Citrus sinensis] 670 0.0
XP_006451271.1 hypothetical protein CICLE_v10007331mg [Citrus cl... 670 0.0
XP_017982878.1 PREDICTED: probable RNA-dependent RNA polymerase ... 499 e-167
XP_010656269.1 PREDICTED: probable RNA-dependent RNA polymerase ... 501 e-166
XP_011659950.1 PREDICTED: probable RNA-dependent RNA polymerase ... 503 e-166
XP_008450775.1 PREDICTED: probable RNA-dependent RNA polymerase ... 501 e-166
XP_017982877.1 PREDICTED: probable RNA-dependent RNA polymerase ... 499 e-165
XP_017982876.1 PREDICTED: probable RNA-dependent RNA polymerase ... 499 e-165
XP_011659951.1 PREDICTED: probable RNA-dependent RNA polymerase ... 498 e-164
XP_011659949.1 PREDICTED: probable RNA-dependent RNA polymerase ... 498 e-164
XP_009352548.1 PREDICTED: probable RNA-dependent RNA polymerase ... 494 e-162
GAV88059.1 RdRP domain-containing protein [Cephalotus follicularis] 485 e-159
XP_019057511.1 PREDICTED: probable RNA-dependent RNA polymerase ... 482 e-158
XP_010532296.1 PREDICTED: probable RNA-dependent RNA polymerase ... 482 e-158
XP_015868099.1 PREDICTED: probable RNA-dependent RNA polymerase ... 474 e-157
XP_015868098.1 PREDICTED: probable RNA-dependent RNA polymerase ... 474 e-157
XP_018815685.1 PREDICTED: probable RNA-dependent RNA polymerase ... 477 e-157
XP_018815684.1 PREDICTED: probable RNA-dependent RNA polymerase ... 477 e-156
XP_010532295.1 PREDICTED: probable RNA-dependent RNA polymerase ... 476 e-156
>XP_006451272.1 hypothetical protein CICLE_v10007331mg [Citrus clementina]
XP_006475557.1 PREDICTED: probable RNA-dependent RNA
polymerase 3 isoform X2 [Citrus sinensis] ESR64512.1
hypothetical protein CICLE_v10007331mg [Citrus
clementina]
Length = 1013
Score = 670 bits (1729), Expect = 0.0
Identities = 332/427 (77%), Positives = 366/427 (85%)
Frame = +3
Query: 6 SHALSHRASIPQYVALGELEFRKAFLMLNYIGEKSLEEVITADEIRGLKDLKMARFESEV 185
SHA+ HRASIPQYVALGELEFRKAFL+L+YIGE SLEEVITADEIRG++DL+MARFESEV
Sbjct: 137 SHAMRHRASIPQYVALGELEFRKAFLILSYIGENSLEEVITADEIRGMRDLQMARFESEV 196
Query: 186 WNALGRNYIKQEDRRMSLDWDSGRTHFYHCHVSTNGSCTFKGPYLNQTKTHLQTELGDEN 365
W LGR I QEDRRMSL WDSG+TH YHCH+ST G+CTFKGPYLNQT+THLQ ELGD+N
Sbjct: 197 WEKLGRKNISQEDRRMSLKWDSGKTHMYHCHISTKGNCTFKGPYLNQTRTHLQRELGDDN 256
Query: 366 VLMVKFADEVGARRSFANWNDSYAKYNEIAREGVLVGLRRYRFFVFXXXXXXXXXXXPTT 545
+L+VKF +E+G RS NWNDSY+KYNEIAREG+LVGLR Y FFVF P+T
Sbjct: 257 ILLVKFDEELGGHRSSNNWNDSYSKYNEIAREGILVGLRCYHFFVFKDGGKEEKKKDPST 316
Query: 546 SSVKCYFVRMESNACVDKGYPYILFGKTVHEARAMFMHVHTVSSVASYMSRLSLILSKTK 725
S VKCYFVRMES+A +D GY YIL GKTVHEAR MFMHV TVSSVA+YMSRLSLILSKT
Sbjct: 317 SPVKCYFVRMESSAFIDMGYQYILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSKTM 376
Query: 726 KLEVDLSTINIQRIEDISCRDKDGNIVYKDGKVLIHTDGTGFISEDLALKCPKYVYKGKC 905
KLEVD S INI+RIED CRDKDGN+VYKDG+ LIHTDGTGFISEDLALKCP YVYK KC
Sbjct: 377 KLEVDFSRINIERIEDEPCRDKDGNVVYKDGEALIHTDGTGFISEDLALKCPTYVYKEKC 436
Query: 906 SNADNIERSVDKKELAEKFSAVAQPESHCGEPPLLMQVRLFYKGIAVKGTLLVNKKLPPR 1085
+N D+ ERS+D+KEL FS VA+ ESH GEPPLLMQVRLFY G AVKGTLL+NKKLPP+
Sbjct: 437 TNDDSTERSIDRKELEANFSDVARTESHYGEPPLLMQVRLFYNGTAVKGTLLLNKKLPPQ 496
Query: 1086 TIQIRPSMIKVEADPDLSGIQTFNSLEVVKTSNPPRKTYLSKNLIALLSYGGVPEFFFLG 1265
TIQIRPSMIKV+AD DLS QTFNSLEVVKTSN PRKTYLS+NLIALLSYGGVPE FFL
Sbjct: 497 TIQIRPSMIKVKADRDLSDGQTFNSLEVVKTSNQPRKTYLSRNLIALLSYGGVPEIFFLD 556
Query: 1266 ILRKALE 1286
ILR AL+
Sbjct: 557 ILRNALD 563
>KDO66531.1 hypothetical protein CISIN_1g001771mg [Citrus sinensis]
Length = 1015
Score = 670 bits (1729), Expect = 0.0
Identities = 332/427 (77%), Positives = 366/427 (85%)
Frame = +3
Query: 6 SHALSHRASIPQYVALGELEFRKAFLMLNYIGEKSLEEVITADEIRGLKDLKMARFESEV 185
SHA+ HRASIPQYVALGELEFRKAFL+L+YIGE SLEEVITADEIRG++DL+MARFESEV
Sbjct: 139 SHAMRHRASIPQYVALGELEFRKAFLILSYIGENSLEEVITADEIRGMRDLQMARFESEV 198
Query: 186 WNALGRNYIKQEDRRMSLDWDSGRTHFYHCHVSTNGSCTFKGPYLNQTKTHLQTELGDEN 365
W LGR I QEDRRMSL WDSG+TH YHCH+ST G+CTFKGPYLNQT+THLQ ELGD+N
Sbjct: 199 WEKLGRKNISQEDRRMSLKWDSGKTHMYHCHISTKGNCTFKGPYLNQTRTHLQRELGDDN 258
Query: 366 VLMVKFADEVGARRSFANWNDSYAKYNEIAREGVLVGLRRYRFFVFXXXXXXXXXXXPTT 545
+L+VKF +E+G RS NWNDSY+KYNEIAREG+LVGLR Y FFVF P+T
Sbjct: 259 ILLVKFDEELGGHRSSNNWNDSYSKYNEIAREGILVGLRCYHFFVFKDGGKEEKKKDPST 318
Query: 546 SSVKCYFVRMESNACVDKGYPYILFGKTVHEARAMFMHVHTVSSVASYMSRLSLILSKTK 725
S VKCYFVRMES+A +D GY YIL GKTVHEAR MFMHV TVSSVA+YMSRLSLILSKT
Sbjct: 319 SPVKCYFVRMESSAFIDMGYQYILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSKTM 378
Query: 726 KLEVDLSTINIQRIEDISCRDKDGNIVYKDGKVLIHTDGTGFISEDLALKCPKYVYKGKC 905
KLEVD S INI+RIED CRDKDGN+VYKDG+ LIHTDGTGFISEDLALKCP YVYK KC
Sbjct: 379 KLEVDFSRINIERIEDEPCRDKDGNVVYKDGEALIHTDGTGFISEDLALKCPTYVYKEKC 438
Query: 906 SNADNIERSVDKKELAEKFSAVAQPESHCGEPPLLMQVRLFYKGIAVKGTLLVNKKLPPR 1085
+N D+ ERS+D+KEL FS VA+ ESH GEPPLLMQVRLFY G AVKGTLL+NKKLPP+
Sbjct: 439 TNDDSTERSIDRKELEANFSDVARTESHYGEPPLLMQVRLFYNGTAVKGTLLLNKKLPPQ 498
Query: 1086 TIQIRPSMIKVEADPDLSGIQTFNSLEVVKTSNPPRKTYLSKNLIALLSYGGVPEFFFLG 1265
TIQIRPSMIKV+AD DLS QTFNSLEVVKTSN PRKTYLS+NLIALLSYGGVPE FFL
Sbjct: 499 TIQIRPSMIKVKADRDLSDGQTFNSLEVVKTSNQPRKTYLSRNLIALLSYGGVPEIFFLD 558
Query: 1266 ILRKALE 1286
ILR AL+
Sbjct: 559 ILRNALD 565
>XP_006451271.1 hypothetical protein CICLE_v10007331mg [Citrus clementina]
XP_006475556.1 PREDICTED: probable RNA-dependent RNA
polymerase 3 isoform X1 [Citrus sinensis] ESR64511.1
hypothetical protein CICLE_v10007331mg [Citrus
clementina]
Length = 1015
Score = 670 bits (1729), Expect = 0.0
Identities = 332/427 (77%), Positives = 366/427 (85%)
Frame = +3
Query: 6 SHALSHRASIPQYVALGELEFRKAFLMLNYIGEKSLEEVITADEIRGLKDLKMARFESEV 185
SHA+ HRASIPQYVALGELEFRKAFL+L+YIGE SLEEVITADEIRG++DL+MARFESEV
Sbjct: 139 SHAMRHRASIPQYVALGELEFRKAFLILSYIGENSLEEVITADEIRGMRDLQMARFESEV 198
Query: 186 WNALGRNYIKQEDRRMSLDWDSGRTHFYHCHVSTNGSCTFKGPYLNQTKTHLQTELGDEN 365
W LGR I QEDRRMSL WDSG+TH YHCH+ST G+CTFKGPYLNQT+THLQ ELGD+N
Sbjct: 199 WEKLGRKNISQEDRRMSLKWDSGKTHMYHCHISTKGNCTFKGPYLNQTRTHLQRELGDDN 258
Query: 366 VLMVKFADEVGARRSFANWNDSYAKYNEIAREGVLVGLRRYRFFVFXXXXXXXXXXXPTT 545
+L+VKF +E+G RS NWNDSY+KYNEIAREG+LVGLR Y FFVF P+T
Sbjct: 259 ILLVKFDEELGGHRSSNNWNDSYSKYNEIAREGILVGLRCYHFFVFKDGGKEEKKKDPST 318
Query: 546 SSVKCYFVRMESNACVDKGYPYILFGKTVHEARAMFMHVHTVSSVASYMSRLSLILSKTK 725
S VKCYFVRMES+A +D GY YIL GKTVHEAR MFMHV TVSSVA+YMSRLSLILSKT
Sbjct: 319 SPVKCYFVRMESSAFIDMGYQYILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSKTM 378
Query: 726 KLEVDLSTINIQRIEDISCRDKDGNIVYKDGKVLIHTDGTGFISEDLALKCPKYVYKGKC 905
KLEVD S INI+RIED CRDKDGN+VYKDG+ LIHTDGTGFISEDLALKCP YVYK KC
Sbjct: 379 KLEVDFSRINIERIEDEPCRDKDGNVVYKDGEALIHTDGTGFISEDLALKCPTYVYKEKC 438
Query: 906 SNADNIERSVDKKELAEKFSAVAQPESHCGEPPLLMQVRLFYKGIAVKGTLLVNKKLPPR 1085
+N D+ ERS+D+KEL FS VA+ ESH GEPPLLMQVRLFY G AVKGTLL+NKKLPP+
Sbjct: 439 TNDDSTERSIDRKELEANFSDVARTESHYGEPPLLMQVRLFYNGTAVKGTLLLNKKLPPQ 498
Query: 1086 TIQIRPSMIKVEADPDLSGIQTFNSLEVVKTSNPPRKTYLSKNLIALLSYGGVPEFFFLG 1265
TIQIRPSMIKV+AD DLS QTFNSLEVVKTSN PRKTYLS+NLIALLSYGGVPE FFL
Sbjct: 499 TIQIRPSMIKVKADRDLSDGQTFNSLEVVKTSNQPRKTYLSRNLIALLSYGGVPEIFFLD 558
Query: 1266 ILRKALE 1286
ILR AL+
Sbjct: 559 ILRNALD 565
>XP_017982878.1 PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X3
[Theobroma cacao]
Length = 810
Score = 499 bits (1285), Expect = e-167
Identities = 263/418 (62%), Positives = 311/418 (74%), Gaps = 1/418 (0%)
Frame = +3
Query: 36 PQYVALGELEFRKAFLMLNYIGEKSLEEVITADEIRGLKDLKMARFESEVWNALGRNYIK 215
PQ VALG LEFRKAFL+LNYIG ++LEEV TAD IR LKDL M +FE EVW LG+ Y
Sbjct: 137 PQLVALGALEFRKAFLILNYIGSETLEEVTTADGIRRLKDLAMDKFEEEVWVTLGQRYNN 196
Query: 216 QEDRRMSLDWDSGRTHFYHCHVSTNGSCTFKGPYLNQTKTHLQTELGDENVLMVKFADEV 395
+DR S+DW+SG+ + YHCHVS NGSC FKGPYL ++ HLQ LGDEN+L+VKFA+
Sbjct: 197 PDDRCKSVDWESGKAYQYHCHVSANGSCRFKGPYLETSRNHLQRVLGDENILIVKFANVT 256
Query: 396 GARRSFANWNDSYAKYNEIAREGVLVGLRRYRFFVFXXXXXXXXXXXPTTSSVKCYFVRM 575
+ S N YA+Y +IA G+LVGLRRYRFFVF PT+SSV+C FVR+
Sbjct: 257 DGKTSAG--NVCYAEYKKIAL-GLLVGLRRYRFFVFKDGGKEARKKDPTSSSVRCLFVRL 313
Query: 576 ESNACVDKGYPYILFGKTVHEARAMFMHVHTVSSVASYMSRLSLILSKTKKLEVDLSTIN 755
ESNA +D G Y+L GKT+ EAR +FMHVHTVS++A YM+RLSLILSKT KLEVDL+ +N
Sbjct: 314 ESNASIDDGKDYVLSGKTIQEARCVFMHVHTVSNMAKYMARLSLILSKTMKLEVDLADVN 373
Query: 756 IQRIEDISCRDKDGNIVY-KDGKVLIHTDGTGFISEDLALKCPKYVYKGKCSNADNIERS 932
+ I DI C+DK GN VY KDG+ IHTDGTG+ISEDLALKCPK V+KG+ N DN E
Sbjct: 374 VVVINDIPCQDKYGNYVYKKDGEPCIHTDGTGYISEDLALKCPKNVFKGRILNGDNDE-- 431
Query: 933 VDKKELAEKFSAVAQPESHCGEPPLLMQVRLFYKGIAVKGTLLVNKKLPPRTIQIRPSMI 1112
KFS + ESH PPLL+Q RLF KG AVKGTLLVNKKLPPRTIQIRPSMI
Sbjct: 432 -------GKFSDMKSTESHHRVPPLLIQFRLFNKGCAVKGTLLVNKKLPPRTIQIRPSMI 484
Query: 1113 KVEADPDLSGIQTFNSLEVVKTSNPPRKTYLSKNLIALLSYGGVPEFFFLGILRKALE 1286
KV DP+L+ + T NSLEVV TSN P++T LS+NLIALLSYGGVP+ FF+ IL+ ALE
Sbjct: 485 KVMPDPNLANMYTMNSLEVVATSNQPKRTSLSRNLIALLSYGGVPDDFFMDILKNALE 542
>XP_010656269.1 PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1 [Vitis
vinifera]
Length = 954
Score = 501 bits (1291), Expect = e-166
Identities = 266/422 (63%), Positives = 318/422 (75%), Gaps = 1/422 (0%)
Frame = +3
Query: 24 RASIPQYVALGELEFRKAFLMLNYIGEKSLEEVITADEIRGLKDLKMARFESEVWNALGR 203
+AS PQ VALGELEFRKAFL+L+YIG+K E++++A+EI LK+L M FE+EVWN LGR
Sbjct: 96 QASSPQLVALGELEFRKAFLILSYIGDKRPEDLLSAEEILKLKNLPMGVFETEVWNNLGR 155
Query: 204 NYIKQEDRRMSLDWDSGRTHFYHCHVSTNGSCTFKGPYLNQTKTHLQTELGDENVLMVKF 383
+IK+EDR+ S DWDS +TH YHCHVS +GS FKGPYLN+T+THLQ LGDEN+L+VKF
Sbjct: 156 KFIKEEDRQRSFDWDSDKTHIYHCHVSPDGSYRFKGPYLNKTRTHLQRVLGDENILLVKF 215
Query: 384 ADEVGARRSFANWNDSYAKYNEIAREGVLVGLRRYRFFVFXXXXXXXXXXXPTTSSVKCY 563
A++V R S DS A YN+IAREG+ VGLR+YRFFVF P TSSVKCY
Sbjct: 216 AEDVTDRSSLNCSTDSNASYNKIAREGIFVGLRQYRFFVFKDGGKEEKKKNP-TSSVKCY 274
Query: 564 FVRMESNACVDKGYPYILFGKTVHEARAMFMHVHTVSSVASYMSRLSLILSKTKKLEVDL 743
FV MES+A L GKTVHEAR +FMH H VSSVA YM+R SLILSKT KL+VDL
Sbjct: 275 FVFMESSA---------LSGKTVHEARCIFMHAHMVSSVAKYMARFSLILSKTVKLDVDL 325
Query: 744 STINIQRIEDISCRDKDGNIVY-KDGKVLIHTDGTGFISEDLALKCPKYVYKGKCSNADN 920
ST+NIQRI+D RD+DG++VY +D K LI TDGTGFISEDLAL+CP + +GK N N
Sbjct: 326 STVNIQRIDDEPGRDEDGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCRGKYMNNGN 385
Query: 921 IERSVDKKELAEKFSAVAQPESHCGEPPLLMQVRLFYKGIAVKGTLLVNKKLPPRTIQIR 1100
+R V EL KFS + E+H EPPLL+Q RLF G AVKGTLL+N+KLPPRTIQIR
Sbjct: 386 SDRLVGNVELEGKFSELRCLETHTWEPPLLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIR 445
Query: 1101 PSMIKVEADPDLSGIQTFNSLEVVKTSNPPRKTYLSKNLIALLSYGGVPEFFFLGILRKA 1280
PSMIKVE DP LS QT NS+E+ TSN PR++YLSK LIALLSYGGVP +F+ +L+ A
Sbjct: 446 PSMIKVETDPKLSDTQTVNSVEINGTSNQPRRSYLSKYLIALLSYGGVPNEYFMNLLKDA 505
Query: 1281 LE 1286
LE
Sbjct: 506 LE 507
>XP_011659950.1 PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
[Cucumis sativus]
Length = 1066
Score = 503 bits (1295), Expect = e-166
Identities = 250/427 (58%), Positives = 317/427 (74%)
Frame = +3
Query: 6 SHALSHRASIPQYVALGELEFRKAFLMLNYIGEKSLEEVITADEIRGLKDLKMARFESEV 185
S ++ RA I Q+VALGELEFRKAFL+L+YIG +SLE V TAD+I+ L L M +FE EV
Sbjct: 194 SSSVLDRARISQFVALGELEFRKAFLLLSYIGGESLERVTTADQIQSLSQLTMEKFEDEV 253
Query: 186 WNALGRNYIKQEDRRMSLDWDSGRTHFYHCHVSTNGSCTFKGPYLNQTKTHLQTELGDEN 365
W G+ Y+ E+RR+ +DWD +TH YHCHV+ +GSC FKGP+LN TKTHLQ LGD+N
Sbjct: 254 WKIFGKKYVTNEERRVYVDWDRRKTHIYHCHVALDGSCRFKGPFLNNTKTHLQRVLGDDN 313
Query: 366 VLMVKFADEVGARRSFANWNDSYAKYNEIAREGVLVGLRRYRFFVFXXXXXXXXXXXPTT 545
VLMVKFA++ + S+ Y++IAR+G+L+GLRRY FFVF PTT
Sbjct: 314 VLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLGLRRYHFFVFKDGGKEEKKKNPTT 373
Query: 546 SSVKCYFVRMESNACVDKGYPYILFGKTVHEARAMFMHVHTVSSVASYMSRLSLILSKTK 725
S+VKCYFVRMES+A +DK PY L +TV EAR++FMH H VSS+ASYM+R SLILSKT
Sbjct: 374 SAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILSKTI 433
Query: 726 KLEVDLSTINIQRIEDISCRDKDGNIVYKDGKVLIHTDGTGFISEDLALKCPKYVYKGKC 905
L++DLST+N+QRI DI C+D GN++Y+DGK LIHTDGTGFISEDLAL+CP V+KG+
Sbjct: 434 NLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQA 493
Query: 906 SNADNIERSVDKKELAEKFSAVAQPESHCGEPPLLMQVRLFYKGIAVKGTLLVNKKLPPR 1085
+ +++R + K + P EPPLL+Q RLFY G+AVKGT L+NK+LPPR
Sbjct: 494 KHDADLKRIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLLNKQLPPR 553
Query: 1086 TIQIRPSMIKVEADPDLSGIQTFNSLEVVKTSNPPRKTYLSKNLIALLSYGGVPEFFFLG 1265
TIQIR SMIKVE DPDL +T NSLE+V TSNPP++T+LS+NLIALL+YGGVP +F+
Sbjct: 554 TIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFLSRNLIALLNYGGVPREYFMN 613
Query: 1266 ILRKALE 1286
IL AL+
Sbjct: 614 ILVDALK 620
>XP_008450775.1 PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
[Cucumis melo]
Length = 1017
Score = 501 bits (1290), Expect = e-166
Identities = 253/427 (59%), Positives = 318/427 (74%)
Frame = +3
Query: 6 SHALSHRASIPQYVALGELEFRKAFLMLNYIGEKSLEEVITADEIRGLKDLKMARFESEV 185
S ++S RA I Q+VALGELEFRKAFL+L+YIG +SLE V TA++I+ L L M +FE EV
Sbjct: 145 SSSVSDRARISQFVALGELEFRKAFLLLSYIGGESLERVTTAEQIQSLSQLAMEKFEDEV 204
Query: 186 WNALGRNYIKQEDRRMSLDWDSGRTHFYHCHVSTNGSCTFKGPYLNQTKTHLQTELGDEN 365
W G+ YI E+RR+ +DWD +TH YHC+V+ +GS FKGP+LN TKTHLQ LGD+N
Sbjct: 205 WKIFGKKYITNEERRVYVDWDRRKTHIYHCYVALDGSYRFKGPFLNNTKTHLQRVLGDDN 264
Query: 366 VLMVKFADEVGARRSFANWNDSYAKYNEIAREGVLVGLRRYRFFVFXXXXXXXXXXXPTT 545
VLMVKFA++ + S+ YN+IAR+G+L+GLRRYRFFVF PTT
Sbjct: 265 VLMVKFAEDKSDTHLPNHTGGSFYVYNKIARDGILLGLRRYRFFVFKDGGKEEKKKNPTT 324
Query: 546 SSVKCYFVRMESNACVDKGYPYILFGKTVHEARAMFMHVHTVSSVASYMSRLSLILSKTK 725
S+VKCYFVRMES+A VDK PY L +TV EAR++FMH H VSS+ASYM+R SLILSKT
Sbjct: 325 SAVKCYFVRMESDAYVDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILSKTI 384
Query: 726 KLEVDLSTINIQRIEDISCRDKDGNIVYKDGKVLIHTDGTGFISEDLALKCPKYVYKGKC 905
KL++DLST+ +QRI DI C+D GN++Y+DGK LIHTDGTGFISEDLAL+CP V+KG+
Sbjct: 385 KLKIDLSTVKVQRIGDIPCKDIYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQA 444
Query: 906 SNADNIERSVDKKELAEKFSAVAQPESHCGEPPLLMQVRLFYKGIAVKGTLLVNKKLPPR 1085
+ +++R + K + P EPPLL+Q RLFY G+AVKGT LVNK+LPPR
Sbjct: 445 KHDADLKRIPAFEGFQNKTLPLTLPGLELREPPLLIQFRLFYNGLAVKGTFLVNKQLPPR 504
Query: 1086 TIQIRPSMIKVEADPDLSGIQTFNSLEVVKTSNPPRKTYLSKNLIALLSYGGVPEFFFLG 1265
TIQIR SMIKVE DPDL +T NSLE+V TSNPP++T+LS+NLIALL+YGGVP +F+
Sbjct: 505 TIQIRDSMIKVEIDPDLVNFETENSLELVGTSNPPKRTFLSRNLIALLNYGGVPREYFMT 564
Query: 1266 ILRKALE 1286
IL AL+
Sbjct: 565 ILVDALK 571
>XP_017982877.1 PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
[Theobroma cacao]
Length = 990
Score = 499 bits (1285), Expect = e-165
Identities = 263/418 (62%), Positives = 311/418 (74%), Gaps = 1/418 (0%)
Frame = +3
Query: 36 PQYVALGELEFRKAFLMLNYIGEKSLEEVITADEIRGLKDLKMARFESEVWNALGRNYIK 215
PQ VALG LEFRKAFL+LNYIG ++LEEV TAD IR LKDL M +FE EVW LG+ Y
Sbjct: 136 PQLVALGALEFRKAFLILNYIGSETLEEVTTADGIRRLKDLAMDKFEEEVWVTLGQRYNN 195
Query: 216 QEDRRMSLDWDSGRTHFYHCHVSTNGSCTFKGPYLNQTKTHLQTELGDENVLMVKFADEV 395
+DR S+DW+SG+ + YHCHVS NGSC FKGPYL ++ HLQ LGDEN+L+VKFA+
Sbjct: 196 PDDRCKSVDWESGKAYQYHCHVSANGSCRFKGPYLETSRNHLQRVLGDENILIVKFANVT 255
Query: 396 GARRSFANWNDSYAKYNEIAREGVLVGLRRYRFFVFXXXXXXXXXXXPTTSSVKCYFVRM 575
+ S N YA+Y +IA G+LVGLRRYRFFVF PT+SSV+C FVR+
Sbjct: 256 DGKTSAG--NVCYAEYKKIAL-GLLVGLRRYRFFVFKDGGKEARKKDPTSSSVRCLFVRL 312
Query: 576 ESNACVDKGYPYILFGKTVHEARAMFMHVHTVSSVASYMSRLSLILSKTKKLEVDLSTIN 755
ESNA +D G Y+L GKT+ EAR +FMHVHTVS++A YM+RLSLILSKT KLEVDL+ +N
Sbjct: 313 ESNASIDDGKDYVLSGKTIQEARCVFMHVHTVSNMAKYMARLSLILSKTMKLEVDLADVN 372
Query: 756 IQRIEDISCRDKDGNIVY-KDGKVLIHTDGTGFISEDLALKCPKYVYKGKCSNADNIERS 932
+ I DI C+DK GN VY KDG+ IHTDGTG+ISEDLALKCPK V+KG+ N DN E
Sbjct: 373 VVVINDIPCQDKYGNYVYKKDGEPCIHTDGTGYISEDLALKCPKNVFKGRILNGDNDE-- 430
Query: 933 VDKKELAEKFSAVAQPESHCGEPPLLMQVRLFYKGIAVKGTLLVNKKLPPRTIQIRPSMI 1112
KFS + ESH PPLL+Q RLF KG AVKGTLLVNKKLPPRTIQIRPSMI
Sbjct: 431 -------GKFSDMKSTESHHRVPPLLIQFRLFNKGCAVKGTLLVNKKLPPRTIQIRPSMI 483
Query: 1113 KVEADPDLSGIQTFNSLEVVKTSNPPRKTYLSKNLIALLSYGGVPEFFFLGILRKALE 1286
KV DP+L+ + T NSLEVV TSN P++T LS+NLIALLSYGGVP+ FF+ IL+ ALE
Sbjct: 484 KVMPDPNLANMYTMNSLEVVATSNQPKRTSLSRNLIALLSYGGVPDDFFMDILKNALE 541
>XP_017982876.1 PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
[Theobroma cacao]
Length = 991
Score = 499 bits (1285), Expect = e-165
Identities = 263/418 (62%), Positives = 311/418 (74%), Gaps = 1/418 (0%)
Frame = +3
Query: 36 PQYVALGELEFRKAFLMLNYIGEKSLEEVITADEIRGLKDLKMARFESEVWNALGRNYIK 215
PQ VALG LEFRKAFL+LNYIG ++LEEV TAD IR LKDL M +FE EVW LG+ Y
Sbjct: 137 PQLVALGALEFRKAFLILNYIGSETLEEVTTADGIRRLKDLAMDKFEEEVWVTLGQRYNN 196
Query: 216 QEDRRMSLDWDSGRTHFYHCHVSTNGSCTFKGPYLNQTKTHLQTELGDENVLMVKFADEV 395
+DR S+DW+SG+ + YHCHVS NGSC FKGPYL ++ HLQ LGDEN+L+VKFA+
Sbjct: 197 PDDRCKSVDWESGKAYQYHCHVSANGSCRFKGPYLETSRNHLQRVLGDENILIVKFANVT 256
Query: 396 GARRSFANWNDSYAKYNEIAREGVLVGLRRYRFFVFXXXXXXXXXXXPTTSSVKCYFVRM 575
+ S N YA+Y +IA G+LVGLRRYRFFVF PT+SSV+C FVR+
Sbjct: 257 DGKTSAG--NVCYAEYKKIAL-GLLVGLRRYRFFVFKDGGKEARKKDPTSSSVRCLFVRL 313
Query: 576 ESNACVDKGYPYILFGKTVHEARAMFMHVHTVSSVASYMSRLSLILSKTKKLEVDLSTIN 755
ESNA +D G Y+L GKT+ EAR +FMHVHTVS++A YM+RLSLILSKT KLEVDL+ +N
Sbjct: 314 ESNASIDDGKDYVLSGKTIQEARCVFMHVHTVSNMAKYMARLSLILSKTMKLEVDLADVN 373
Query: 756 IQRIEDISCRDKDGNIVY-KDGKVLIHTDGTGFISEDLALKCPKYVYKGKCSNADNIERS 932
+ I DI C+DK GN VY KDG+ IHTDGTG+ISEDLALKCPK V+KG+ N DN E
Sbjct: 374 VVVINDIPCQDKYGNYVYKKDGEPCIHTDGTGYISEDLALKCPKNVFKGRILNGDNDE-- 431
Query: 933 VDKKELAEKFSAVAQPESHCGEPPLLMQVRLFYKGIAVKGTLLVNKKLPPRTIQIRPSMI 1112
KFS + ESH PPLL+Q RLF KG AVKGTLLVNKKLPPRTIQIRPSMI
Sbjct: 432 -------GKFSDMKSTESHHRVPPLLIQFRLFNKGCAVKGTLLVNKKLPPRTIQIRPSMI 484
Query: 1113 KVEADPDLSGIQTFNSLEVVKTSNPPRKTYLSKNLIALLSYGGVPEFFFLGILRKALE 1286
KV DP+L+ + T NSLEVV TSN P++T LS+NLIALLSYGGVP+ FF+ IL+ ALE
Sbjct: 485 KVMPDPNLANMYTMNSLEVVATSNQPKRTSLSRNLIALLSYGGVPDDFFMDILKNALE 542
>XP_011659951.1 PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3
[Cucumis sativus]
Length = 1020
Score = 498 bits (1283), Expect = e-164
Identities = 250/431 (58%), Positives = 317/431 (73%), Gaps = 4/431 (0%)
Frame = +3
Query: 6 SHALSHRASIPQYVALGELEFRKAFLMLNYIGEKSLEEVITADEIRGLKDLKMARFESEV 185
S ++ RA I Q+VALGELEFRKAFL+L+YIG +SLE V TAD+I+ L L M +FE EV
Sbjct: 144 SSSVLDRARISQFVALGELEFRKAFLLLSYIGGESLERVTTADQIQSLSQLTMEKFEDEV 203
Query: 186 WNALGRNYIKQEDRRMSLDWDSGRTHFYHCHVSTNGSCTFKGPYLNQTKTHLQTELGDEN 365
W G+ Y+ E+RR+ +DWD +TH YHCHV+ +GSC FKGP+LN TKTHLQ LGD+N
Sbjct: 204 WKIFGKKYVTNEERRVYVDWDRRKTHIYHCHVALDGSCRFKGPFLNNTKTHLQRVLGDDN 263
Query: 366 VLMVKFADEVGARRSFANWNDSYAKYNEIAREGVLVGLRRYRFFVFXXXXXXXXXXXPTT 545
VLMVKFA++ + S+ Y++IAR+G+L+GLRRY FFVF PTT
Sbjct: 264 VLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLGLRRYHFFVFKDGGKEEKKKNPTT 323
Query: 546 SSVKCYFVRMESNACVDKGYPYILFGKTVHEARAMFMHVHTVSSVASYMSRLSLILSKTK 725
S+VKCYFVRMES+A +DK PY L +TV EAR++FMH H VSS+ASYM+R SLILSKT
Sbjct: 324 SAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILSKTI 383
Query: 726 KLEVDLSTINIQRIEDISCRDKDGNIVYKDGKVLIHTDGTGFISEDLALKCPKYVYKGKC 905
L++DLST+N+QRI DI C+D GN++Y+DGK LIHTDGTGFISEDLAL+CP V+KG+
Sbjct: 384 NLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQA 443
Query: 906 SNADNIERSVDKKELAEKFS----AVAQPESHCGEPPLLMQVRLFYKGIAVKGTLLVNKK 1073
+ +++ + E F + P EPPLL+Q RLFY G+AVKGT L+NK+
Sbjct: 444 KHDADLKAIWQRIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLLNKQ 503
Query: 1074 LPPRTIQIRPSMIKVEADPDLSGIQTFNSLEVVKTSNPPRKTYLSKNLIALLSYGGVPEF 1253
LPPRTIQIR SMIKVE DPDL +T NSLE+V TSNPP++T+LS+NLIALL+YGGVP
Sbjct: 504 LPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFLSRNLIALLNYGGVPRE 563
Query: 1254 FFLGILRKALE 1286
+F+ IL AL+
Sbjct: 564 YFMNILVDALK 574
>XP_011659949.1 PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
[Cucumis sativus] KGN66169.1 hypothetical protein
Csa_1G574860 [Cucumis sativus]
Length = 1070
Score = 498 bits (1283), Expect = e-164
Identities = 250/431 (58%), Positives = 317/431 (73%), Gaps = 4/431 (0%)
Frame = +3
Query: 6 SHALSHRASIPQYVALGELEFRKAFLMLNYIGEKSLEEVITADEIRGLKDLKMARFESEV 185
S ++ RA I Q+VALGELEFRKAFL+L+YIG +SLE V TAD+I+ L L M +FE EV
Sbjct: 194 SSSVLDRARISQFVALGELEFRKAFLLLSYIGGESLERVTTADQIQSLSQLTMEKFEDEV 253
Query: 186 WNALGRNYIKQEDRRMSLDWDSGRTHFYHCHVSTNGSCTFKGPYLNQTKTHLQTELGDEN 365
W G+ Y+ E+RR+ +DWD +TH YHCHV+ +GSC FKGP+LN TKTHLQ LGD+N
Sbjct: 254 WKIFGKKYVTNEERRVYVDWDRRKTHIYHCHVALDGSCRFKGPFLNNTKTHLQRVLGDDN 313
Query: 366 VLMVKFADEVGARRSFANWNDSYAKYNEIAREGVLVGLRRYRFFVFXXXXXXXXXXXPTT 545
VLMVKFA++ + S+ Y++IAR+G+L+GLRRY FFVF PTT
Sbjct: 314 VLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLGLRRYHFFVFKDGGKEEKKKNPTT 373
Query: 546 SSVKCYFVRMESNACVDKGYPYILFGKTVHEARAMFMHVHTVSSVASYMSRLSLILSKTK 725
S+VKCYFVRMES+A +DK PY L +TV EAR++FMH H VSS+ASYM+R SLILSKT
Sbjct: 374 SAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILSKTI 433
Query: 726 KLEVDLSTINIQRIEDISCRDKDGNIVYKDGKVLIHTDGTGFISEDLALKCPKYVYKGKC 905
L++DLST+N+QRI DI C+D GN++Y+DGK LIHTDGTGFISEDLAL+CP V+KG+
Sbjct: 434 NLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQA 493
Query: 906 SNADNIERSVDKKELAEKFS----AVAQPESHCGEPPLLMQVRLFYKGIAVKGTLLVNKK 1073
+ +++ + E F + P EPPLL+Q RLFY G+AVKGT L+NK+
Sbjct: 494 KHDADLKAIWQRIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLLNKQ 553
Query: 1074 LPPRTIQIRPSMIKVEADPDLSGIQTFNSLEVVKTSNPPRKTYLSKNLIALLSYGGVPEF 1253
LPPRTIQIR SMIKVE DPDL +T NSLE+V TSNPP++T+LS+NLIALL+YGGVP
Sbjct: 554 LPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFLSRNLIALLNYGGVPRE 613
Query: 1254 FFLGILRKALE 1286
+F+ IL AL+
Sbjct: 614 YFMNILVDALK 624
>XP_009352548.1 PREDICTED: probable RNA-dependent RNA polymerase 3 [Pyrus x
bretschneideri]
Length = 1088
Score = 494 bits (1272), Expect = e-162
Identities = 246/413 (59%), Positives = 309/413 (74%)
Frame = +3
Query: 48 ALGELEFRKAFLMLNYIGEKSLEEVITADEIRGLKDLKMARFESEVWNALGRNYIKQEDR 227
ALGELEFRK FL+LNY G VI A+ IR KDL M FE+ VW ALGRNYI +EDR
Sbjct: 230 ALGELEFRKQFLILNYSGGMQWGSVIAAETIRSWKDLPMHVFETRVWEALGRNYIGKEDR 289
Query: 228 RMSLDWDSGRTHFYHCHVSTNGSCTFKGPYLNQTKTHLQTELGDENVLMVKFADEVGARR 407
R++ +WDSG+TH YHC+VS +GSC FKGP+LN+ +T LQ LGD+NVLMVKFADE
Sbjct: 290 RLTFEWDSGKTHLYHCYVSLDGSCKFKGPFLNKERTLLQKVLGDDNVLMVKFADEGNGTG 349
Query: 408 SFANWNDSYAKYNEIAREGVLVGLRRYRFFVFXXXXXXXXXXXPTTSSVKCYFVRMESNA 587
++N+ YA Y ++AREG+LVGLRRYRFFVF PT+S VKCYFVRM+S+A
Sbjct: 350 PSNSYNNKYATYRKLAREGILVGLRRYRFFVFKDGGKEEKKKNPTSSPVKCYFVRMDSDA 409
Query: 588 CVDKGYPYILFGKTVHEARAMFMHVHTVSSVASYMSRLSLILSKTKKLEVDLSTINIQRI 767
+D+ ++L +T++EAR++FMH HTVSSVA+YM+R SLILSKT + VDLS +N++ I
Sbjct: 410 SIDRDVWHMLANRTIYEARSLFMHAHTVSSVATYMARFSLILSKTIRFPVDLSVVNVEFI 469
Query: 768 EDISCRDKDGNIVYKDGKVLIHTDGTGFISEDLALKCPKYVYKGKCSNADNIERSVDKKE 947
++ CRD+ GN++Y+D K LIHTDGTGFISEDLAL CP + KGK + IER + E
Sbjct: 470 DEEYCRDESGNLIYRDDKPLIHTDGTGFISEDLALLCPNNISKGKRISNQKIERLPNHNE 529
Query: 948 LAEKFSAVAQPESHCGEPPLLMQVRLFYKGIAVKGTLLVNKKLPPRTIQIRPSMIKVEAD 1127
L K QP S GEPPLL+Q RLFYKG AVKGT LVNK LPP+T+QIRPSM+KV+ D
Sbjct: 530 LDGKGMEKKQPGSRIGEPPLLIQFRLFYKGYAVKGTFLVNKMLPPKTVQIRPSMVKVQID 589
Query: 1128 PDLSGIQTFNSLEVVKTSNPPRKTYLSKNLIALLSYGGVPEFFFLGILRKALE 1286
P+LS +T N+LE+V TS PPRK+YLS+NLIALL +GGVP+ +F+ IL +ALE
Sbjct: 590 PELSDNETVNALEIVGTSIPPRKSYLSRNLIALLFHGGVPKEYFMEILERALE 642
>GAV88059.1 RdRP domain-containing protein [Cephalotus follicularis]
Length = 1031
Score = 485 bits (1249), Expect = e-159
Identities = 256/430 (59%), Positives = 311/430 (72%), Gaps = 2/430 (0%)
Frame = +3
Query: 3 SSHALSHRASIPQYVALGELEFRKAFLMLNYIGEKSLEEVITADEIRGLKDLKMARFESE 182
SS +S Q +ALGELEFRK FL+LNY+GEK +EE I+++ IR LKD M FE
Sbjct: 158 SSEKVSGERFSSQLMALGELEFRKQFLILNYLGEKRMEEAISSERIRDLKDFPMHVFEMA 217
Query: 183 VWNALGRNYIKQEDRRMSLDWDSGRTHFYHCHVSTNGSCTFKGPYLNQTKTHLQTELGDE 362
VW+ LG+ I +EDRR LDWDSG H Y CH+S +GSC FKGPYL++ +T L LGDE
Sbjct: 218 VWDELGKYNIGKEDRRKILDWDSGNLHVYQCHISLDGSCRFKGPYLSKGRTFLHAVLGDE 277
Query: 363 NVLMVKFADEVGARRSFANWNDSYAKY-NEIAREGVLVGLRRYRFFVFXXXXXXXXXXXP 539
NVLMVKFA++ R + + + Y +Y N+IAREG+LVGLRRYRFFVF P
Sbjct: 278 NVLMVKFAEDRTERGTTSRYY--YTRYYNKIAREGILVGLRRYRFFVFKDGGKGEKGKDP 335
Query: 540 TTSSVKCYFVRMESNACVDKGYPYILFGKTVHEARAMFMHVHTVSSVASYMSRLSLILSK 719
+S V+CYF R+ES+A +D+ YILFGKTVHEAR +FMHVHTVSS+++YM+R SLILSK
Sbjct: 336 NSSGVRCYFARLESDAPIDRRQNYILFGKTVHEARCIFMHVHTVSSLSAYMARFSLILSK 395
Query: 720 TKKLEVDLSTINIQRIEDISCRDKDGNIVY-KDGKVLIHTDGTGFISEDLALKCPKYVYK 896
T +L+VDL +INI RI+D+ C+D+ GN VY KDGK+LIHTDGTGFISEDLALKCPK YK
Sbjct: 396 TMELKVDLQSINIARIDDVPCQDEGGNNVYDKDGKLLIHTDGTGFISEDLALKCPKNAYK 455
Query: 897 GKCSNADNIERSVDKKELAEKFSAVAQPESHCGEPPLLMQVRLFYKGIAVKGTLLVNKKL 1076
G C N +ER + + + S + ES EPPLL+Q RLF G AVKGT L+NKKL
Sbjct: 456 GNCYNNAKVERFFECDD--RRNSKRKRSESQLEEPPLLIQFRLFNNGCAVKGTFLLNKKL 513
Query: 1077 PPRTIQIRPSMIKVEADPDLSGIQTFNSLEVVKTSNPPRKTYLSKNLIALLSYGGVPEFF 1256
P TIQ+RPSMIKVE DP L T NSLEVV TSN P+K LS+NLIALLSYGG+P+ F
Sbjct: 514 PEGTIQVRPSMIKVETDPKLENAPTKNSLEVVGTSNHPKKACLSRNLIALLSYGGIPKKF 573
Query: 1257 FLGILRKALE 1286
FL IL ALE
Sbjct: 574 FLDILMNALE 583
>XP_019057511.1 PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X5
[Tarenaya hassleriana]
Length = 1012
Score = 482 bits (1240), Expect = e-158
Identities = 242/417 (58%), Positives = 301/417 (72%), Gaps = 1/417 (0%)
Frame = +3
Query: 39 QYVALGELEFRKAFLMLNYIGEKSLEEVITADEIRGLKDLKMARFESEVWNALGRNYIKQ 218
Q +ALGELEF+KAFLMLNYI +K LEEVITADEIR +KDL M +ES +WN LG ++ ++
Sbjct: 150 QQLALGELEFKKAFLMLNYIADKRLEEVITADEIRRMKDLPMVEYESGIWNRLGLHFCRR 209
Query: 219 EDRRMSLDWDSGRTHFYHCHVSTNGSCTFKGPYLNQTKTHLQTELGDENVLMVKFADEVG 398
EDRRM L+WD G+ H+Y C+V+++G+C FKGP+L T THL LGDENVLMVKF D
Sbjct: 210 EDRRMLLEWDCGKPHYYQCYVASDGTCRFKGPFLENTTTHLHKVLGDENVLMVKFEDVAC 269
Query: 399 ARRSFANWNDSYAKYNEIAREGVLVGLRRYRFFVFXXXXXXXXXXXPTTSSVKCYFVRME 578
R N +DSY+ Y IA G+++GLRRY+FFVF P+T VKCYFV +
Sbjct: 270 RRDLPINSSDSYSTYKHIATNGIMIGLRRYQFFVFKDGGKEEKKKDPSTKGVKCYFVCTD 329
Query: 579 SNACVDKGYPYILFGKTVHEARAMFMHVHTVSSVASYMSRLSLILSKTKKLEVDLSTINI 758
S A D+G Y K+VHE R FMHVH + ++A+YM+R SLILSKTKKLEVDL+ IN
Sbjct: 330 SRAFNDRGKDYNFSRKSVHEVRMHFMHVHNLQTLANYMARFSLILSKTKKLEVDLTDINF 389
Query: 759 QRIEDISCRDKDGNIVY-KDGKVLIHTDGTGFISEDLALKCPKYVYKGKCSNADNIERSV 935
RI+DI+C D+DGN+V+ K+GK IH+DGTG+ISEDLA KCP +YKG+C+ +++ +V
Sbjct: 390 DRIDDINCHDQDGNVVFDKNGKPFIHSDGTGYISEDLARKCPMNIYKGQCTRGKHVQGNV 449
Query: 936 DKKELAEKFSAVAQPESHCGEPPLLMQVRLFYKGIAVKGTLLVNKKLPPRTIQIRPSMIK 1115
+ E E S EPPLL+Q RLFY G AVKGT L+NKKLPPRTIQ+RPSMIK
Sbjct: 450 SEFEAQEGCSQ---------EPPLLIQFRLFYNGCAVKGTFLMNKKLPPRTIQVRPSMIK 500
Query: 1116 VEADPDLSGIQTFNSLEVVKTSNPPRKTYLSKNLIALLSYGGVPEFFFLGILRKALE 1286
V+ DP LS + NSLEVV TSNPP++T LS+NLIALLSYG VP FFL IL LE
Sbjct: 501 VDTDPHLSNFSSINSLEVVSTSNPPKRTKLSRNLIALLSYGEVPNDFFLDILLNTLE 557
>XP_010532296.1 PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X4
[Tarenaya hassleriana]
Length = 1013
Score = 482 bits (1240), Expect = e-158
Identities = 242/417 (58%), Positives = 301/417 (72%), Gaps = 1/417 (0%)
Frame = +3
Query: 39 QYVALGELEFRKAFLMLNYIGEKSLEEVITADEIRGLKDLKMARFESEVWNALGRNYIKQ 218
Q +ALGELEF+KAFLMLNYI +K LEEVITADEIR +KDL M +ES +WN LG ++ ++
Sbjct: 151 QQLALGELEFKKAFLMLNYIADKRLEEVITADEIRRMKDLPMVEYESGIWNRLGLHFCRR 210
Query: 219 EDRRMSLDWDSGRTHFYHCHVSTNGSCTFKGPYLNQTKTHLQTELGDENVLMVKFADEVG 398
EDRRM L+WD G+ H+Y C+V+++G+C FKGP+L T THL LGDENVLMVKF D
Sbjct: 211 EDRRMLLEWDCGKPHYYQCYVASDGTCRFKGPFLENTTTHLHKVLGDENVLMVKFEDVAC 270
Query: 399 ARRSFANWNDSYAKYNEIAREGVLVGLRRYRFFVFXXXXXXXXXXXPTTSSVKCYFVRME 578
R N +DSY+ Y IA G+++GLRRY+FFVF P+T VKCYFV +
Sbjct: 271 RRDLPINSSDSYSTYKHIATNGIMIGLRRYQFFVFKDGGKEEKKKDPSTKGVKCYFVCTD 330
Query: 579 SNACVDKGYPYILFGKTVHEARAMFMHVHTVSSVASYMSRLSLILSKTKKLEVDLSTINI 758
S A D+G Y K+VHE R FMHVH + ++A+YM+R SLILSKTKKLEVDL+ IN
Sbjct: 331 SRAFNDRGKDYNFSRKSVHEVRMHFMHVHNLQTLANYMARFSLILSKTKKLEVDLTDINF 390
Query: 759 QRIEDISCRDKDGNIVY-KDGKVLIHTDGTGFISEDLALKCPKYVYKGKCSNADNIERSV 935
RI+DI+C D+DGN+V+ K+GK IH+DGTG+ISEDLA KCP +YKG+C+ +++ +V
Sbjct: 391 DRIDDINCHDQDGNVVFDKNGKPFIHSDGTGYISEDLARKCPMNIYKGQCTRGKHVQGNV 450
Query: 936 DKKELAEKFSAVAQPESHCGEPPLLMQVRLFYKGIAVKGTLLVNKKLPPRTIQIRPSMIK 1115
+ E E S EPPLL+Q RLFY G AVKGT L+NKKLPPRTIQ+RPSMIK
Sbjct: 451 SEFEAQEGCSQ---------EPPLLIQFRLFYNGCAVKGTFLMNKKLPPRTIQVRPSMIK 501
Query: 1116 VEADPDLSGIQTFNSLEVVKTSNPPRKTYLSKNLIALLSYGGVPEFFFLGILRKALE 1286
V+ DP LS + NSLEVV TSNPP++T LS+NLIALLSYG VP FFL IL LE
Sbjct: 502 VDTDPHLSNFSSINSLEVVSTSNPPKRTKLSRNLIALLSYGEVPNDFFLDILLNTLE 558
>XP_015868099.1 PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
[Ziziphus jujuba]
Length = 824
Score = 474 bits (1221), Expect = e-157
Identities = 243/413 (58%), Positives = 300/413 (72%)
Frame = +3
Query: 48 ALGELEFRKAFLMLNYIGEKSLEEVITADEIRGLKDLKMARFESEVWNALGRNYIKQEDR 227
ALGELEFRK FL+L+Y G K L+ VI+A+EIR LKDL M FE VW +LG++Y +EDR
Sbjct: 140 ALGELEFRKQFLILSYSGGKKLQTVISAEEIRRLKDLPMILFEQRVWQSLGQSYALREDR 199
Query: 228 RMSLDWDSGRTHFYHCHVSTNGSCTFKGPYLNQTKTHLQTELGDENVLMVKFADEVGARR 407
RM LDWDSG+TH YHCHVS +G+ +FKGPYL++T THLQ LGD+NVLMVKF E+
Sbjct: 200 RMHLDWDSGKTHIYHCHVSRDGNISFKGPYLSKTTTHLQKVLGDDNVLMVKFDGEIKETH 259
Query: 408 SFANWNDSYAKYNEIAREGVLVGLRRYRFFVFXXXXXXXXXXXPTTSSVKCYFVRMESNA 587
+ D+Y+K IA+EG+LVGLRRYRFFVF PT+S VKCYFVRME+ A
Sbjct: 260 PLDYYYDAYSK---IAKEGILVGLRRYRFFVFKDGGKEKRKKNPTSSPVKCYFVRMETEA 316
Query: 588 CVDKGYPYILFGKTVHEARAMFMHVHTVSSVASYMSRLSLILSKTKKLEVDLSTINIQRI 767
+DK Y L TV EAR FMH H VSSV +YM+RLSLILSKT L+ +LS++N+QRI
Sbjct: 317 FIDKMGSYKLSNMTVAEARCYFMHAHMVSSVPTYMARLSLILSKTISLQTELSSVNVQRI 376
Query: 768 EDISCRDKDGNIVYKDGKVLIHTDGTGFISEDLALKCPKYVYKGKCSNADNIERSVDKKE 947
D C+D+ N++++D K LIHTDGTGFISEDLAL CP + G C ++ ER ++ E
Sbjct: 377 RDEYCKDEHKNLIFRDEKPLIHTDGTGFISEDLALLCPNNLQTGGCLGKEDAERILNVDE 436
Query: 948 LAEKFSAVAQPESHCGEPPLLMQVRLFYKGIAVKGTLLVNKKLPPRTIQIRPSMIKVEAD 1127
+K QP+ EPPLL+Q RLF G AVKGT LVNKKLPPRT+QIR SM+KVE D
Sbjct: 437 HKDKVLETKQPKFKTREPPLLIQFRLFNNGYAVKGTFLVNKKLPPRTMQIRDSMVKVERD 496
Query: 1128 PDLSGIQTFNSLEVVKTSNPPRKTYLSKNLIALLSYGGVPEFFFLGILRKALE 1286
LS QT NS+E+V TSNPP+KTYLS+NLIALLS+GGVP +FL +L+ AL+
Sbjct: 497 ERLSNNQTANSMEIVGTSNPPKKTYLSRNLIALLSHGGVPNEYFLNVLQNALQ 549
>XP_015868098.1 PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
[Ziziphus jujuba]
Length = 863
Score = 474 bits (1221), Expect = e-157
Identities = 243/413 (58%), Positives = 300/413 (72%)
Frame = +3
Query: 48 ALGELEFRKAFLMLNYIGEKSLEEVITADEIRGLKDLKMARFESEVWNALGRNYIKQEDR 227
ALGELEFRK FL+L+Y G K L+ VI+A+EIR LKDL M FE VW +LG++Y +EDR
Sbjct: 140 ALGELEFRKQFLILSYSGGKKLQTVISAEEIRRLKDLPMILFEQRVWQSLGQSYALREDR 199
Query: 228 RMSLDWDSGRTHFYHCHVSTNGSCTFKGPYLNQTKTHLQTELGDENVLMVKFADEVGARR 407
RM LDWDSG+TH YHCHVS +G+ +FKGPYL++T THLQ LGD+NVLMVKF E+
Sbjct: 200 RMHLDWDSGKTHIYHCHVSRDGNISFKGPYLSKTTTHLQKVLGDDNVLMVKFDGEIKETH 259
Query: 408 SFANWNDSYAKYNEIAREGVLVGLRRYRFFVFXXXXXXXXXXXPTTSSVKCYFVRMESNA 587
+ D+Y+K IA+EG+LVGLRRYRFFVF PT+S VKCYFVRME+ A
Sbjct: 260 PLDYYYDAYSK---IAKEGILVGLRRYRFFVFKDGGKEKRKKNPTSSPVKCYFVRMETEA 316
Query: 588 CVDKGYPYILFGKTVHEARAMFMHVHTVSSVASYMSRLSLILSKTKKLEVDLSTINIQRI 767
+DK Y L TV EAR FMH H VSSV +YM+RLSLILSKT L+ +LS++N+QRI
Sbjct: 317 FIDKMGSYKLSNMTVAEARCYFMHAHMVSSVPTYMARLSLILSKTISLQTELSSVNVQRI 376
Query: 768 EDISCRDKDGNIVYKDGKVLIHTDGTGFISEDLALKCPKYVYKGKCSNADNIERSVDKKE 947
D C+D+ N++++D K LIHTDGTGFISEDLAL CP + G C ++ ER ++ E
Sbjct: 377 RDEYCKDEHKNLIFRDEKPLIHTDGTGFISEDLALLCPNNLQTGGCLGKEDAERILNVDE 436
Query: 948 LAEKFSAVAQPESHCGEPPLLMQVRLFYKGIAVKGTLLVNKKLPPRTIQIRPSMIKVEAD 1127
+K QP+ EPPLL+Q RLF G AVKGT LVNKKLPPRT+QIR SM+KVE D
Sbjct: 437 HKDKVLETKQPKFKTREPPLLIQFRLFNNGYAVKGTFLVNKKLPPRTMQIRDSMVKVERD 496
Query: 1128 PDLSGIQTFNSLEVVKTSNPPRKTYLSKNLIALLSYGGVPEFFFLGILRKALE 1286
LS QT NS+E+V TSNPP+KTYLS+NLIALLS+GGVP +FL +L+ AL+
Sbjct: 497 ERLSNNQTANSMEIVGTSNPPKKTYLSRNLIALLSHGGVPNEYFLNVLQNALQ 549
>XP_018815685.1 PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
[Juglans regia]
Length = 979
Score = 477 bits (1227), Expect = e-157
Identities = 251/431 (58%), Positives = 321/431 (74%), Gaps = 4/431 (0%)
Frame = +3
Query: 3 SSHALSHRASIPQYVALGELEFRKAFLMLNYIGEKSLEEV-ITADEIRGLKDLKMARFES 179
SS+ S A + +A GELEFRKAFL+L+YIG LE++ I+ADEIR LKDL M FE
Sbjct: 111 SSNLSSAGAVRSRLLAWGELEFRKAFLILSYIGANQLEDIDISADEIRSLKDLGMVEFEE 170
Query: 180 EVWNALGRNYIKQEDRRMSLDWDSGRTHFYHCHVSTNGSCTFKGPYLNQTKTHLQTELGD 359
VW ALG+ Y+ +E RRM++DWD+ +TH YHCHVS +G C+FKGPYL++TKTHLQ LGD
Sbjct: 171 RVWKALGQKYVDREHRRMTVDWDAKKTHLYHCHVSQDGKCSFKGPYLHKTKTHLQRVLGD 230
Query: 360 ENVLMVKFADEVGAR--RSFANWNDSYAKYNEIAREGVLVGLRRYRFFVFXXXXXXXXXX 533
ENVL+VKFA+E R R +++D Y+ Y++IAREG+ VG RR+ FFVF
Sbjct: 231 ENVLVVKFAEERVDRNKRGIISFDD-YSIYSKIAREGIHVGTRRFCFFVFKDGGKEEKKK 289
Query: 534 XPTTSSVKCYFVRMESNACVDKGYPYILFGKTVHEARAMFMHVHTVSSVASYMSRLSLIL 713
PT+S VKCYF+ M+SNA + + + IL K V EAR+ FMH H + S+ASYM+R SLIL
Sbjct: 290 NPTSSPVKCYFIHMDSNATIGQSH-CILSNKNVCEARSHFMHAHRLPSMASYMARFSLIL 348
Query: 714 SKTKKLEVDLSTINIQRIEDISCRDKDGNIVY-KDGKVLIHTDGTGFISEDLALKCPKYV 890
SKT KL+VDL+++NI+ IED+ CRD+DG IVY +D K IHTDGTGFIS+DLAL CP +
Sbjct: 349 SKTMKLDVDLASVNIEVIEDVVCRDRDGKIVYDRDDKHRIHTDGTGFISDDLALLCPSNL 408
Query: 891 YKGKCSNADNIERSVDKKELAEKFSAVAQPESHCGEPPLLMQVRLFYKGIAVKGTLLVNK 1070
Y+G+ +NIERS + LA K A+ ES EPPLL+Q RLF G A+KGTLLVNK
Sbjct: 409 YRGEQIRDENIERSPNLDVLAGKLLAMELSESSIREPPLLIQCRLFNNGCAIKGTLLVNK 468
Query: 1071 KLPPRTIQIRPSMIKVEADPDLSGIQTFNSLEVVKTSNPPRKTYLSKNLIALLSYGGVPE 1250
KLPPRTIQ+RPSMIKV+ DP+LS I+T NSLE+V TSN P++++LS+NLIALLSYGG+P+
Sbjct: 469 KLPPRTIQVRPSMIKVDKDPNLSNIRTENSLEIVGTSNHPKRSFLSRNLIALLSYGGIPK 528
Query: 1251 FFFLGILRKAL 1283
+F+ IL AL
Sbjct: 529 EYFMDILINAL 539
>XP_018815684.1 PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
[Juglans regia]
Length = 992
Score = 477 bits (1227), Expect = e-156
Identities = 251/431 (58%), Positives = 321/431 (74%), Gaps = 4/431 (0%)
Frame = +3
Query: 3 SSHALSHRASIPQYVALGELEFRKAFLMLNYIGEKSLEEV-ITADEIRGLKDLKMARFES 179
SS+ S A + +A GELEFRKAFL+L+YIG LE++ I+ADEIR LKDL M FE
Sbjct: 111 SSNLSSAGAVRSRLLAWGELEFRKAFLILSYIGANQLEDIDISADEIRSLKDLGMVEFEE 170
Query: 180 EVWNALGRNYIKQEDRRMSLDWDSGRTHFYHCHVSTNGSCTFKGPYLNQTKTHLQTELGD 359
VW ALG+ Y+ +E RRM++DWD+ +TH YHCHVS +G C+FKGPYL++TKTHLQ LGD
Sbjct: 171 RVWKALGQKYVDREHRRMTVDWDAKKTHLYHCHVSQDGKCSFKGPYLHKTKTHLQRVLGD 230
Query: 360 ENVLMVKFADEVGAR--RSFANWNDSYAKYNEIAREGVLVGLRRYRFFVFXXXXXXXXXX 533
ENVL+VKFA+E R R +++D Y+ Y++IAREG+ VG RR+ FFVF
Sbjct: 231 ENVLVVKFAEERVDRNKRGIISFDD-YSIYSKIAREGIHVGTRRFCFFVFKDGGKEEKKK 289
Query: 534 XPTTSSVKCYFVRMESNACVDKGYPYILFGKTVHEARAMFMHVHTVSSVASYMSRLSLIL 713
PT+S VKCYF+ M+SNA + + + IL K V EAR+ FMH H + S+ASYM+R SLIL
Sbjct: 290 NPTSSPVKCYFIHMDSNATIGQSH-CILSNKNVCEARSHFMHAHRLPSMASYMARFSLIL 348
Query: 714 SKTKKLEVDLSTINIQRIEDISCRDKDGNIVY-KDGKVLIHTDGTGFISEDLALKCPKYV 890
SKT KL+VDL+++NI+ IED+ CRD+DG IVY +D K IHTDGTGFIS+DLAL CP +
Sbjct: 349 SKTMKLDVDLASVNIEVIEDVVCRDRDGKIVYDRDDKHRIHTDGTGFISDDLALLCPSNL 408
Query: 891 YKGKCSNADNIERSVDKKELAEKFSAVAQPESHCGEPPLLMQVRLFYKGIAVKGTLLVNK 1070
Y+G+ +NIERS + LA K A+ ES EPPLL+Q RLF G A+KGTLLVNK
Sbjct: 409 YRGEQIRDENIERSPNLDVLAGKLLAMELSESSIREPPLLIQCRLFNNGCAIKGTLLVNK 468
Query: 1071 KLPPRTIQIRPSMIKVEADPDLSGIQTFNSLEVVKTSNPPRKTYLSKNLIALLSYGGVPE 1250
KLPPRTIQ+RPSMIKV+ DP+LS I+T NSLE+V TSN P++++LS+NLIALLSYGG+P+
Sbjct: 469 KLPPRTIQVRPSMIKVDKDPNLSNIRTENSLEIVGTSNHPKRSFLSRNLIALLSYGGIPK 528
Query: 1251 FFFLGILRKAL 1283
+F+ IL AL
Sbjct: 529 EYFMDILINAL 539
>XP_010532295.1 PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3
[Tarenaya hassleriana]
Length = 1018
Score = 476 bits (1224), Expect = e-156
Identities = 242/422 (57%), Positives = 301/422 (71%), Gaps = 6/422 (1%)
Frame = +3
Query: 39 QYVALGELEFRKAFLMLNYIGEKSLEEVITADEIRGLKDLKMARFESEVWNALGRNYIKQ 218
Q +ALGELEF+KAFLMLNYI +K LEEVITADEIR +KDL M +ES +WN LG ++ ++
Sbjct: 151 QQLALGELEFKKAFLMLNYIADKRLEEVITADEIRRMKDLPMVEYESGIWNRLGLHFCRR 210
Query: 219 EDRRMSLDWDSGRTHFYHCHVSTNGSCTFKGPYLNQTKTHLQTELGDENVLMVKFADEVG 398
EDRRM L+WD G+ H+Y C+V+++G+C FKGP+L T THL LGDENVLMVKF D
Sbjct: 211 EDRRMLLEWDCGKPHYYQCYVASDGTCRFKGPFLENTTTHLHKVLGDENVLMVKFEDVAC 270
Query: 399 ARRSFANWNDSYAKYNEIAREGVLVGLRRYRFFVFXXXXXXXXXXXPTTSSVKCYFVRME 578
R N +DSY+ Y IA G+++GLRRY+FFVF P+T VKCYFV +
Sbjct: 271 RRDLPINSSDSYSTYKHIATNGIMIGLRRYQFFVFKDGGKEEKKKDPSTKGVKCYFVCTD 330
Query: 579 SNACVDKGYPYILFGKTVHEARAMFMHVHTVSSVASYMSRLSLILSKTKKLEVDLSTINI 758
S A D+G Y K+VHE R FMHVH + ++A+YM+R SLILSKTKKLEVDL+ IN
Sbjct: 331 SRAFNDRGKDYNFSRKSVHEVRMHFMHVHNLQTLANYMARFSLILSKTKKLEVDLTDINF 390
Query: 759 QRIEDISCR-----DKDGNIVY-KDGKVLIHTDGTGFISEDLALKCPKYVYKGKCSNADN 920
RI+DI+C D+DGN+V+ K+GK IH+DGTG+ISEDLA KCP +YKG+C+ +
Sbjct: 391 DRIDDINCHVFLYTDQDGNVVFDKNGKPFIHSDGTGYISEDLARKCPMNIYKGQCTRGKH 450
Query: 921 IERSVDKKELAEKFSAVAQPESHCGEPPLLMQVRLFYKGIAVKGTLLVNKKLPPRTIQIR 1100
++ +V + E E S EPPLL+Q RLFY G AVKGT L+NKKLPPRTIQ+R
Sbjct: 451 VQGNVSEFEAQEGCSQ---------EPPLLIQFRLFYNGCAVKGTFLMNKKLPPRTIQVR 501
Query: 1101 PSMIKVEADPDLSGIQTFNSLEVVKTSNPPRKTYLSKNLIALLSYGGVPEFFFLGILRKA 1280
PSMIKV+ DP LS + NSLEVV TSNPP++T LS+NLIALLSYG VP FFL IL
Sbjct: 502 PSMIKVDTDPHLSNFSSINSLEVVSTSNPPKRTKLSRNLIALLSYGEVPNDFFLDILLNT 561
Query: 1281 LE 1286
LE
Sbjct: 562 LE 563