BLASTX nr result
ID: Phellodendron21_contig00036279
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00036279
(801 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KDO60022.1 hypothetical protein CISIN_1g001405mg [Citrus sinensis] 304 1e-92
XP_006421901.1 hypothetical protein CICLE_v10004302mg [Citrus cl... 298 5e-92
XP_006490371.1 PREDICTED: DNA mismatch repair protein MSH3 [Citr... 298 2e-90
XP_011048700.1 PREDICTED: DNA mismatch repair protein MSH3 [Popu... 260 2e-76
XP_012090272.1 PREDICTED: DNA mismatch repair protein MSH3 isofo... 256 3e-76
OAY30385.1 hypothetical protein MANES_14G026600 [Manihot esculenta] 258 1e-75
OAY30383.1 hypothetical protein MANES_14G026600 [Manihot esculenta] 258 1e-75
OAY30384.1 hypothetical protein MANES_14G026600 [Manihot esculenta] 258 2e-75
XP_016434374.1 PREDICTED: DNA mismatch repair protein MSH3-like ... 244 4e-75
XP_012090271.1 PREDICTED: DNA mismatch repair protein MSH3 isofo... 256 5e-75
CDX92716.1 BnaC07g39740D [Brassica napus] 254 3e-74
XP_013703978.1 PREDICTED: DNA mismatch repair protein MSH3-like ... 254 3e-74
XP_013594053.1 PREDICTED: DNA mismatch repair protein MSH3 [Bras... 254 3e-74
XP_006283020.1 hypothetical protein CARUB_v10004012mg [Capsella ... 253 1e-73
XP_002867605.1 hypothetical protein ARALYDRAFT_492273 [Arabidops... 252 2e-73
OAO97457.1 MSH3 [Arabidopsis thaliana] 252 2e-73
NP_194284.2 homolog of DNA mismatch repair protein MSH3 [Arabido... 252 2e-73
XP_010035123.1 PREDICTED: DNA mismatch repair protein MSH3 [Euca... 251 3e-73
XP_006413297.1 hypothetical protein EUTSA_v10024274mg [Eutrema s... 251 5e-73
XP_002510803.1 PREDICTED: DNA mismatch repair protein MSH3 [Rici... 250 1e-72
>KDO60022.1 hypothetical protein CISIN_1g001405mg [Citrus sinensis]
Length = 1083
Score = 304 bits (779), Expect = 1e-92
Identities = 163/199 (81%), Positives = 172/199 (86%), Gaps = 4/199 (2%)
Frame = -2
Query: 638 MGKQKQQVISRFFAPKSNXXXXXXXXXXXXXXXXXXXPKIAATVTFSPAKRKVVSTLFP- 462
MGKQKQQVISRFFAPKSN PKIAATV+FSPAKRKVVS+LFP
Sbjct: 1 MGKQKQQVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPP 60
Query: 461 QTPKKPKLSPHTLNP--TPSLQT-FNKKYTPLEQQVVELKTKYPDILLMIEVGYKFRFFG 291
+TPKKPKLSPHTLNP TPS QT NKKYTPLEQQVVELKTKYPD+LLMIEVGYKFRFFG
Sbjct: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
Query: 290 EDAEIAAKVLRIYAHVDHSFMTASIPTFRLNVHLRRLVNAGYKVGVVKQTETAAIKAHGL 111
EDAE+AAKVL IYAH+DH+FMTASIPTFRLNVH+RRLVNAG+KVGVVKQTETAAIKAHG
Sbjct: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGP 180
Query: 110 GKAGPFGRGLSALYTKATL 54
GKAGPFGRGLSALYTKATL
Sbjct: 181 GKAGPFGRGLSALYTKATL 199
>XP_006421901.1 hypothetical protein CICLE_v10004302mg [Citrus clementina]
ESR35141.1 hypothetical protein CICLE_v10004302mg
[Citrus clementina]
Length = 853
Score = 298 bits (764), Expect = 5e-92
Identities = 162/203 (79%), Positives = 171/203 (84%), Gaps = 8/203 (3%)
Frame = -2
Query: 638 MGKQKQQVISRFFAPKSNXXXXXXXXXXXXXXXXXXXP----KIAATVTFSPAKRKVVST 471
MGKQKQQVISRFFAPKSN KIAATV+FSPAKRKVVS+
Sbjct: 1 MGKQKQQVISRFFAPKSNQTTASSSASSPPPPLPPPQQTPPPKIAATVSFSPAKRKVVSS 60
Query: 470 LFP-QTPKKPKLSPHTLNP--TPSLQT-FNKKYTPLEQQVVELKTKYPDILLMIEVGYKF 303
LFP +TPKKPKLSPHTLNP TPS QT NKKYTPLEQQVVELKTKYPD+LLMIEVGYKF
Sbjct: 61 LFPPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKF 120
Query: 302 RFFGEDAEIAAKVLRIYAHVDHSFMTASIPTFRLNVHLRRLVNAGYKVGVVKQTETAAIK 123
RFFGEDAE+AAKVL IYAH+DH+FMTASIPTFRLNVH+RRLVNAG+KVGVVKQTETAAIK
Sbjct: 121 RFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK 180
Query: 122 AHGLGKAGPFGRGLSALYTKATL 54
AHG GKAGPFGRGLSALYTKATL
Sbjct: 181 AHGPGKAGPFGRGLSALYTKATL 203
>XP_006490371.1 PREDICTED: DNA mismatch repair protein MSH3 [Citrus sinensis]
Length = 1087
Score = 298 bits (764), Expect = 2e-90
Identities = 162/203 (79%), Positives = 171/203 (84%), Gaps = 8/203 (3%)
Frame = -2
Query: 638 MGKQKQQVISRFFAPKSNXXXXXXXXXXXXXXXXXXXP----KIAATVTFSPAKRKVVST 471
MGKQKQQVISRFFAPKSN KIAATV+FSPAKRKVVS+
Sbjct: 1 MGKQKQQVISRFFAPKSNQTTASSSASSPPPPLPPPQQTPPPKIAATVSFSPAKRKVVSS 60
Query: 470 LFP-QTPKKPKLSPHTLNP--TPSLQT-FNKKYTPLEQQVVELKTKYPDILLMIEVGYKF 303
LFP +TPKKPKLSPHTLNP TPS QT NKKYTPLEQQVVELKTKYPD+LLMIEVGYKF
Sbjct: 61 LFPPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKF 120
Query: 302 RFFGEDAEIAAKVLRIYAHVDHSFMTASIPTFRLNVHLRRLVNAGYKVGVVKQTETAAIK 123
RFFGEDAE+AAKVL IYAH+DH+FMTASIPTFRLNVH+RRLVNAG+KVGVVKQTETAAIK
Sbjct: 121 RFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK 180
Query: 122 AHGLGKAGPFGRGLSALYTKATL 54
AHG GKAGPFGRGLSALYTKATL
Sbjct: 181 AHGPGKAGPFGRGLSALYTKATL 203
>XP_011048700.1 PREDICTED: DNA mismatch repair protein MSH3 [Populus euphratica]
Length = 1086
Score = 260 bits (665), Expect = 2e-76
Identities = 140/213 (65%), Positives = 156/213 (73%), Gaps = 18/213 (8%)
Frame = -2
Query: 638 MGKQKQQVISRFFAPKSNXXXXXXXXXXXXXXXXXXXPKIAATVTFSPAKRKVVSTLFPQ 459
MGKQKQQ+ISRFFAPKS PKI TV FSP+KR ++ST
Sbjct: 1 MGKQKQQIISRFFAPKSKPTTTSPPPPPQTALSSSSSPKITTTVAFSPSKRNLLSTRITS 60
Query: 458 TPKKPKLSPHTLNPTPSL--------------QTFN----KKYTPLEQQVVELKTKYPDI 333
TPK+PKLSPHT NP PSL QT +K+TPLEQQVV+LK +YPD+
Sbjct: 61 TPKRPKLSPHTQNPLPSLHKKFVDKLLEPQTSQTSQPQNTQKFTPLEQQVVDLKQRYPDV 120
Query: 332 LLMIEVGYKFRFFGEDAEIAAKVLRIYAHVDHSFMTASIPTFRLNVHLRRLVNAGYKVGV 153
LLMIEVGYKFRFFGEDAEIAA+VL IYAH DH+FMTAS+PTFRLNVH+RRLV+ GYKVGV
Sbjct: 121 LLMIEVGYKFRFFGEDAEIAARVLGIYAHKDHNFMTASVPTFRLNVHVRRLVSEGYKVGV 180
Query: 152 VKQTETAAIKAHGLGKAGPFGRGLSALYTKATL 54
VKQTETAAIKAHG K+GPF RGLSALYTKATL
Sbjct: 181 VKQTETAAIKAHGENKSGPFCRGLSALYTKATL 213
>XP_012090272.1 PREDICTED: DNA mismatch repair protein MSH3 isoform X2 [Jatropha
curcas]
Length = 848
Score = 256 bits (655), Expect = 3e-76
Identities = 140/223 (62%), Positives = 160/223 (71%), Gaps = 28/223 (12%)
Frame = -2
Query: 638 MGKQKQQVISRFFAPK---SNXXXXXXXXXXXXXXXXXXXPKIAATVTFSPAKRKVVSTL 468
MGKQKQQVISRFFAPK S+ PKI+A V+FSPAKRK++S
Sbjct: 1 MGKQKQQVISRFFAPKPKTSDSSTPTVKGPSSSSSSPTPTPKISAVVSFSPAKRKLLSAH 60
Query: 467 FPQTPKKPKLSPHTLNPTPSL-------------------------QTFNKKYTPLEQQV 363
TPK+PKLSPHT NP P+ + +KKYTPLEQQV
Sbjct: 61 LTSTPKRPKLSPHTQNPIPTSPNRHRKFLDKFLEPSPEIIQPSYTQSSVSKKYTPLEQQV 120
Query: 362 VELKTKYPDILLMIEVGYKFRFFGEDAEIAAKVLRIYAHVDHSFMTASIPTFRLNVHLRR 183
++LK KYPD+LLMIEVGYK+RFFGEDAEIAA+VL IYAH+DH+FMTAS+PTFRLNVH+RR
Sbjct: 121 LDLKNKYPDVLLMIEVGYKYRFFGEDAEIAARVLGIYAHMDHNFMTASVPTFRLNVHVRR 180
Query: 182 LVNAGYKVGVVKQTETAAIKAHGLGKAGPFGRGLSALYTKATL 54
LV+AG+KVGVVKQTETAAIKAHG KAGPF RGLSALYTKATL
Sbjct: 181 LVSAGHKVGVVKQTETAAIKAHGDNKAGPFCRGLSALYTKATL 223
>OAY30385.1 hypothetical protein MANES_14G026600 [Manihot esculenta]
Length = 1101
Score = 258 bits (659), Expect = 1e-75
Identities = 140/220 (63%), Positives = 160/220 (72%), Gaps = 25/220 (11%)
Frame = -2
Query: 638 MGKQKQQVISRFFAPKSNXXXXXXXXXXXXXXXXXXXP-KIAATVTFSPAKRKVVSTLFP 462
MGKQKQQVISRFFAPK KI+ATV+FSPAKRK++S+
Sbjct: 1 MGKQKQQVISRFFAPKPKINDSSTPPTAPPSSSSPISSPKISATVSFSPAKRKLLSSHLT 60
Query: 461 QTPKKPKLSPHTLNP--TPSLQ----------------------TFNKKYTPLEQQVVEL 354
+PK+PKLSPHT NP TPS+ + KKYTPLEQQV++L
Sbjct: 61 SSPKRPKLSPHTQNPIPTPSVHQKFLEKLLEPSPGIPQPSSTQSSIPKKYTPLEQQVLDL 120
Query: 353 KTKYPDILLMIEVGYKFRFFGEDAEIAAKVLRIYAHVDHSFMTASIPTFRLNVHLRRLVN 174
K KYPD+LLMIEVGYK+RFFGEDAEIAA+VLRIYAH+DH+FMTAS+PTFRLNVH+RRLV+
Sbjct: 121 KNKYPDVLLMIEVGYKYRFFGEDAEIAARVLRIYAHMDHNFMTASVPTFRLNVHVRRLVS 180
Query: 173 AGYKVGVVKQTETAAIKAHGLGKAGPFGRGLSALYTKATL 54
AGYKVGVVKQTETAAIKAHG K GPF RGLSALYTKAT+
Sbjct: 181 AGYKVGVVKQTETAAIKAHGDNKTGPFCRGLSALYTKATM 220
>OAY30383.1 hypothetical protein MANES_14G026600 [Manihot esculenta]
Length = 1103
Score = 258 bits (659), Expect = 1e-75
Identities = 140/220 (63%), Positives = 160/220 (72%), Gaps = 25/220 (11%)
Frame = -2
Query: 638 MGKQKQQVISRFFAPKSNXXXXXXXXXXXXXXXXXXXP-KIAATVTFSPAKRKVVSTLFP 462
MGKQKQQVISRFFAPK KI+ATV+FSPAKRK++S+
Sbjct: 1 MGKQKQQVISRFFAPKPKINDSSTPPTAPPSSSSPISSPKISATVSFSPAKRKLLSSHLT 60
Query: 461 QTPKKPKLSPHTLNP--TPSLQ----------------------TFNKKYTPLEQQVVEL 354
+PK+PKLSPHT NP TPS+ + KKYTPLEQQV++L
Sbjct: 61 SSPKRPKLSPHTQNPIPTPSVHQKFLEKLLEPSPGIPQPSSTQSSIPKKYTPLEQQVLDL 120
Query: 353 KTKYPDILLMIEVGYKFRFFGEDAEIAAKVLRIYAHVDHSFMTASIPTFRLNVHLRRLVN 174
K KYPD+LLMIEVGYK+RFFGEDAEIAA+VLRIYAH+DH+FMTAS+PTFRLNVH+RRLV+
Sbjct: 121 KNKYPDVLLMIEVGYKYRFFGEDAEIAARVLRIYAHMDHNFMTASVPTFRLNVHVRRLVS 180
Query: 173 AGYKVGVVKQTETAAIKAHGLGKAGPFGRGLSALYTKATL 54
AGYKVGVVKQTETAAIKAHG K GPF RGLSALYTKAT+
Sbjct: 181 AGYKVGVVKQTETAAIKAHGDNKTGPFCRGLSALYTKATM 220
>OAY30384.1 hypothetical protein MANES_14G026600 [Manihot esculenta]
Length = 1127
Score = 258 bits (659), Expect = 2e-75
Identities = 140/220 (63%), Positives = 160/220 (72%), Gaps = 25/220 (11%)
Frame = -2
Query: 638 MGKQKQQVISRFFAPKSNXXXXXXXXXXXXXXXXXXXP-KIAATVTFSPAKRKVVSTLFP 462
MGKQKQQVISRFFAPK KI+ATV+FSPAKRK++S+
Sbjct: 1 MGKQKQQVISRFFAPKPKINDSSTPPTAPPSSSSPISSPKISATVSFSPAKRKLLSSHLT 60
Query: 461 QTPKKPKLSPHTLNP--TPSLQ----------------------TFNKKYTPLEQQVVEL 354
+PK+PKLSPHT NP TPS+ + KKYTPLEQQV++L
Sbjct: 61 SSPKRPKLSPHTQNPIPTPSVHQKFLEKLLEPSPGIPQPSSTQSSIPKKYTPLEQQVLDL 120
Query: 353 KTKYPDILLMIEVGYKFRFFGEDAEIAAKVLRIYAHVDHSFMTASIPTFRLNVHLRRLVN 174
K KYPD+LLMIEVGYK+RFFGEDAEIAA+VLRIYAH+DH+FMTAS+PTFRLNVH+RRLV+
Sbjct: 121 KNKYPDVLLMIEVGYKYRFFGEDAEIAARVLRIYAHMDHNFMTASVPTFRLNVHVRRLVS 180
Query: 173 AGYKVGVVKQTETAAIKAHGLGKAGPFGRGLSALYTKATL 54
AGYKVGVVKQTETAAIKAHG K GPF RGLSALYTKAT+
Sbjct: 181 AGYKVGVVKQTETAAIKAHGDNKTGPFCRGLSALYTKATM 220
>XP_016434374.1 PREDICTED: DNA mismatch repair protein MSH3-like [Nicotiana
tabacum]
Length = 463
Score = 244 bits (624), Expect = 4e-75
Identities = 141/226 (62%), Positives = 149/226 (65%), Gaps = 31/226 (13%)
Frame = -2
Query: 638 MGKQKQQVISRFFAPKSNXXXXXXXXXXXXXXXXXXXPKIAATVTFSPAKRKVVSTLFPQ 459
MGK KQQVISRFFAPK PKI TVTFSPAKR S L
Sbjct: 1 MGKPKQQVISRFFAPKPKNEKDPITSTSTSTPPCTLPPKITTTVTFSPAKRLRTSQLTSP 60
Query: 458 TPKK----PKLSPHTLNPTPSL------QTF---------------------NKKYTPLE 372
P K PKLSPH NP P L Q F N KYTPLE
Sbjct: 61 PPTKHTKIPKLSPHVHNPPPPLPNPTLHQRFLDKLLEPSTDLLEPSKCYDIRNPKYTPLE 120
Query: 371 QQVVELKTKYPDILLMIEVGYKFRFFGEDAEIAAKVLRIYAHVDHSFMTASIPTFRLNVH 192
QQVVELK KYPDILLMIEVGYK+RFFG+DAE AA+VL IYAH+DH+F+TAS+PTFRLNVH
Sbjct: 121 QQVVELKAKYPDILLMIEVGYKYRFFGQDAENAARVLGIYAHMDHNFLTASVPTFRLNVH 180
Query: 191 LRRLVNAGYKVGVVKQTETAAIKAHGLGKAGPFGRGLSALYTKATL 54
+RRLVNAGYKVGVVKQTETAAIKAHG K GPFGR LSALYTKATL
Sbjct: 181 VRRLVNAGYKVGVVKQTETAAIKAHGSNKLGPFGRELSALYTKATL 226
>XP_012090271.1 PREDICTED: DNA mismatch repair protein MSH3 isoform X1 [Jatropha
curcas] KDP22293.1 hypothetical protein JCGZ_26124
[Jatropha curcas]
Length = 1105
Score = 256 bits (655), Expect = 5e-75
Identities = 140/223 (62%), Positives = 160/223 (71%), Gaps = 28/223 (12%)
Frame = -2
Query: 638 MGKQKQQVISRFFAPK---SNXXXXXXXXXXXXXXXXXXXPKIAATVTFSPAKRKVVSTL 468
MGKQKQQVISRFFAPK S+ PKI+A V+FSPAKRK++S
Sbjct: 1 MGKQKQQVISRFFAPKPKTSDSSTPTVKGPSSSSSSPTPTPKISAVVSFSPAKRKLLSAH 60
Query: 467 FPQTPKKPKLSPHTLNPTPSL-------------------------QTFNKKYTPLEQQV 363
TPK+PKLSPHT NP P+ + +KKYTPLEQQV
Sbjct: 61 LTSTPKRPKLSPHTQNPIPTSPNRHRKFLDKFLEPSPEIIQPSYTQSSVSKKYTPLEQQV 120
Query: 362 VELKTKYPDILLMIEVGYKFRFFGEDAEIAAKVLRIYAHVDHSFMTASIPTFRLNVHLRR 183
++LK KYPD+LLMIEVGYK+RFFGEDAEIAA+VL IYAH+DH+FMTAS+PTFRLNVH+RR
Sbjct: 121 LDLKNKYPDVLLMIEVGYKYRFFGEDAEIAARVLGIYAHMDHNFMTASVPTFRLNVHVRR 180
Query: 182 LVNAGYKVGVVKQTETAAIKAHGLGKAGPFGRGLSALYTKATL 54
LV+AG+KVGVVKQTETAAIKAHG KAGPF RGLSALYTKATL
Sbjct: 181 LVSAGHKVGVVKQTETAAIKAHGDNKAGPFCRGLSALYTKATL 223
>CDX92716.1 BnaC07g39740D [Brassica napus]
Length = 1092
Score = 254 bits (649), Expect = 3e-74
Identities = 136/215 (63%), Positives = 159/215 (73%), Gaps = 20/215 (9%)
Frame = -2
Query: 638 MGKQKQQVISRFFAPKSNXXXXXXXXXXXXXXXXXXXPKIAATVTFSPAKRKVVST-LFP 462
MGKQKQQVISRFFAPK KI+ATV+FSP+KRK++S L
Sbjct: 1 MGKQKQQVISRFFAPKPKPSPPPNQESSTPPP------KISATVSFSPSKRKLLSDHLAA 54
Query: 461 QTPKKPKLSPHTLNPTPSLQ-------------------TFNKKYTPLEQQVVELKTKYP 339
+PKKPKLSPHT NP P+L T + KYTPLEQQVVELK+K+P
Sbjct: 55 ASPKKPKLSPHTQNPDPNLHRRFLQRFLEPPPEEESLPVTTSIKYTPLEQQVVELKSKHP 114
Query: 338 DILLMIEVGYKFRFFGEDAEIAAKVLRIYAHVDHSFMTASIPTFRLNVHLRRLVNAGYKV 159
D++LM+EVGY++RFFGEDAEIAA+VL IYAH+DHSFMTAS+PTFRLNVH+RRLVNAGYK+
Sbjct: 115 DVILMVEVGYRYRFFGEDAEIAARVLGIYAHMDHSFMTASVPTFRLNVHVRRLVNAGYKI 174
Query: 158 GVVKQTETAAIKAHGLGKAGPFGRGLSALYTKATL 54
GVVKQTETAAIK+HG ++GPF RGLS LYTKATL
Sbjct: 175 GVVKQTETAAIKSHGANRSGPFFRGLSGLYTKATL 209
>XP_013703978.1 PREDICTED: DNA mismatch repair protein MSH3-like [Brassica napus]
Length = 1101
Score = 254 bits (649), Expect = 3e-74
Identities = 136/215 (63%), Positives = 159/215 (73%), Gaps = 20/215 (9%)
Frame = -2
Query: 638 MGKQKQQVISRFFAPKSNXXXXXXXXXXXXXXXXXXXPKIAATVTFSPAKRKVVST-LFP 462
MGKQKQQVISRFFAPK KI+ATV+FSP+KRK++S L
Sbjct: 1 MGKQKQQVISRFFAPKPKPSPPPNQESSTPPP------KISATVSFSPSKRKLLSDHLAA 54
Query: 461 QTPKKPKLSPHTLNPTPSLQ-------------------TFNKKYTPLEQQVVELKTKYP 339
+PKKPKLSPHT NP P+L T + KYTPLEQQVVELK+K+P
Sbjct: 55 ASPKKPKLSPHTQNPDPNLHRRFLQRFLEPPPEEESLPVTTSIKYTPLEQQVVELKSKHP 114
Query: 338 DILLMIEVGYKFRFFGEDAEIAAKVLRIYAHVDHSFMTASIPTFRLNVHLRRLVNAGYKV 159
D++LM+EVGY++RFFGEDAEIAA+VL IYAH+DHSFMTAS+PTFRLNVH+RRLVNAGYK+
Sbjct: 115 DVILMVEVGYRYRFFGEDAEIAARVLGIYAHMDHSFMTASVPTFRLNVHVRRLVNAGYKI 174
Query: 158 GVVKQTETAAIKAHGLGKAGPFGRGLSALYTKATL 54
GVVKQTETAAIK+HG ++GPF RGLS LYTKATL
Sbjct: 175 GVVKQTETAAIKSHGANRSGPFFRGLSGLYTKATL 209
>XP_013594053.1 PREDICTED: DNA mismatch repair protein MSH3 [Brassica oleracea var.
oleracea]
Length = 1101
Score = 254 bits (649), Expect = 3e-74
Identities = 136/215 (63%), Positives = 159/215 (73%), Gaps = 20/215 (9%)
Frame = -2
Query: 638 MGKQKQQVISRFFAPKSNXXXXXXXXXXXXXXXXXXXPKIAATVTFSPAKRKVVST-LFP 462
MGKQKQQVISRFFAPK KI+ATV+FSP+KRK++S L
Sbjct: 1 MGKQKQQVISRFFAPKPKPSPPPNQESSTPPP------KISATVSFSPSKRKLLSDHLAA 54
Query: 461 QTPKKPKLSPHTLNPTPSLQ-------------------TFNKKYTPLEQQVVELKTKYP 339
+PKKPKLSPHT NP P+L T + KYTPLEQQVVELK+K+P
Sbjct: 55 ASPKKPKLSPHTQNPDPNLHRRFLQRFLEPPPEEESLPVTTSIKYTPLEQQVVELKSKHP 114
Query: 338 DILLMIEVGYKFRFFGEDAEIAAKVLRIYAHVDHSFMTASIPTFRLNVHLRRLVNAGYKV 159
D++LM+EVGY++RFFGEDAEIAA+VL IYAH+DHSFMTAS+PTFRLNVH+RRLVNAGYK+
Sbjct: 115 DVILMVEVGYRYRFFGEDAEIAARVLGIYAHMDHSFMTASVPTFRLNVHVRRLVNAGYKI 174
Query: 158 GVVKQTETAAIKAHGLGKAGPFGRGLSALYTKATL 54
GVVKQTETAAIK+HG ++GPF RGLS LYTKATL
Sbjct: 175 GVVKQTETAAIKSHGANRSGPFFRGLSGLYTKATL 209
>XP_006283020.1 hypothetical protein CARUB_v10004012mg [Capsella rubella]
EOA15918.1 hypothetical protein CARUB_v10004012mg
[Capsella rubella]
Length = 1182
Score = 253 bits (647), Expect = 1e-73
Identities = 139/217 (64%), Positives = 158/217 (72%), Gaps = 22/217 (10%)
Frame = -2
Query: 638 MGKQKQQVISRFFAPKSNXXXXXXXXXXXXXXXXXXXPKIAATVTFSPAKRKVVST-LFP 462
MGKQKQQ ISRFFAPK KI+ATV+FSP+KRK++S L
Sbjct: 90 MGKQKQQTISRFFAPKPKSPTEEPIPVAESSSPAP---KISATVSFSPSKRKLLSEHLSA 146
Query: 461 QTPKKPKLSPHTLNPTPS-------LQTF--------------NKKYTPLEQQVVELKTK 345
+PKKPKLSPHT NP P LQ F +KYTPLEQQVVELK+K
Sbjct: 147 ASPKKPKLSPHTQNPIPDPNLHRRFLQRFLEPSPEESVPATSSARKYTPLEQQVVELKSK 206
Query: 344 YPDILLMIEVGYKFRFFGEDAEIAAKVLRIYAHVDHSFMTASIPTFRLNVHLRRLVNAGY 165
YPD++LM+EVGY++RFFGEDAEIAA+VL IYAH+DHSFMTASIPTFRLN H+RRLVNAGY
Sbjct: 207 YPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHSFMTASIPTFRLNFHVRRLVNAGY 266
Query: 164 KVGVVKQTETAAIKAHGLGKAGPFGRGLSALYTKATL 54
K+GVVKQTETAAIK+HG +AGPF RGLSALYTKATL
Sbjct: 267 KIGVVKQTETAAIKSHGANRAGPFFRGLSALYTKATL 303
>XP_002867605.1 hypothetical protein ARALYDRAFT_492273 [Arabidopsis lyrata subsp.
lyrata] EFH43864.1 hypothetical protein
ARALYDRAFT_492273 [Arabidopsis lyrata subsp. lyrata]
Length = 1078
Score = 252 bits (643), Expect = 2e-73
Identities = 137/218 (62%), Positives = 158/218 (72%), Gaps = 23/218 (10%)
Frame = -2
Query: 638 MGKQKQQVISRFFAPKSNXXXXXXXXXXXXXXXXXXXPKIAATVTFSPAKRKVVST-LFP 462
MGKQKQQ ISRFFAPK KI+ATV+FSP+KRK++S L
Sbjct: 1 MGKQKQQTISRFFAPKPKSPTQEPNPVPESSTPPP---KISATVSFSPSKRKLLSDHLAA 57
Query: 461 QTPKKPKLSPHTLNPTPS-------LQTF---------------NKKYTPLEQQVVELKT 348
+PKKPKLSPHT NP P LQ F ++KYTPLEQQVVELK
Sbjct: 58 ASPKKPKLSPHTQNPIPDPNLHQRFLQRFLEPSPEESVPETSSSSRKYTPLEQQVVELKR 117
Query: 347 KYPDILLMIEVGYKFRFFGEDAEIAAKVLRIYAHVDHSFMTASIPTFRLNVHLRRLVNAG 168
KYPD++LM+EVGY++RFFGEDAEIAA+VL IYAH+DHSFMTAS+PTFRLN H+RRLVNAG
Sbjct: 118 KYPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHSFMTASVPTFRLNFHVRRLVNAG 177
Query: 167 YKVGVVKQTETAAIKAHGLGKAGPFGRGLSALYTKATL 54
YK+GVVKQTETAAIK+HG ++GPF RGLSALYTKATL
Sbjct: 178 YKIGVVKQTETAAIKSHGANRSGPFFRGLSALYTKATL 215
>OAO97457.1 MSH3 [Arabidopsis thaliana]
Length = 1081
Score = 252 bits (643), Expect = 2e-73
Identities = 136/217 (62%), Positives = 158/217 (72%), Gaps = 22/217 (10%)
Frame = -2
Query: 638 MGKQKQQVISRFFAPKSNXXXXXXXXXXXXXXXXXXXPKIAATVTFSPAKRKVVST-LFP 462
MGKQKQQ ISRFFAPK KI+ATV+FSP+KRK++S L
Sbjct: 1 MGKQKQQTISRFFAPKPKSPTHEPNPVAESSTPPP---KISATVSFSPSKRKLLSDHLAA 57
Query: 461 QTPKKPKLSPHTLNPTPS-------LQTF--------------NKKYTPLEQQVVELKTK 345
+PKKPKLSPHT NP P LQ F ++KYTPLEQQVVELK+K
Sbjct: 58 ASPKKPKLSPHTQNPVPDPNLHQRFLQRFLEPSPEEYVPETSSSRKYTPLEQQVVELKSK 117
Query: 344 YPDILLMIEVGYKFRFFGEDAEIAAKVLRIYAHVDHSFMTASIPTFRLNVHLRRLVNAGY 165
YPD++LM+EVGY++RFFGEDAEIAA+VL IYAH+DH+FMTAS+PTFRLN H+RRLVNAGY
Sbjct: 118 YPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTASVPTFRLNFHVRRLVNAGY 177
Query: 164 KVGVVKQTETAAIKAHGLGKAGPFGRGLSALYTKATL 54
K+GVVKQTETAAIK+HG + GPF RGLSALYTKATL
Sbjct: 178 KIGVVKQTETAAIKSHGANRTGPFFRGLSALYTKATL 214
>NP_194284.2 homolog of DNA mismatch repair protein MSH3 [Arabidopsis thaliana]
O65607.2 RecName: Full=DNA mismatch repair protein MSH3;
Short=AtMSH3; AltName: Full=MutS protein homolog 3
CAA07684.1 Msh3 protein [Arabidopsis thaliana]
AEE85075.1 homolog of DNA mismatch repair protein MSH3
[Arabidopsis thaliana]
Length = 1081
Score = 252 bits (643), Expect = 2e-73
Identities = 136/217 (62%), Positives = 158/217 (72%), Gaps = 22/217 (10%)
Frame = -2
Query: 638 MGKQKQQVISRFFAPKSNXXXXXXXXXXXXXXXXXXXPKIAATVTFSPAKRKVVST-LFP 462
MGKQKQQ ISRFFAPK KI+ATV+FSP+KRK++S L
Sbjct: 1 MGKQKQQTISRFFAPKPKSPTHEPNPVAESSTPPP---KISATVSFSPSKRKLLSDHLAA 57
Query: 461 QTPKKPKLSPHTLNPTPS-------LQTF--------------NKKYTPLEQQVVELKTK 345
+PKKPKLSPHT NP P LQ F ++KYTPLEQQVVELK+K
Sbjct: 58 ASPKKPKLSPHTQNPVPDPNLHQRFLQRFLEPSPEEYVPETSSSRKYTPLEQQVVELKSK 117
Query: 344 YPDILLMIEVGYKFRFFGEDAEIAAKVLRIYAHVDHSFMTASIPTFRLNVHLRRLVNAGY 165
YPD++LM+EVGY++RFFGEDAEIAA+VL IYAH+DH+FMTAS+PTFRLN H+RRLVNAGY
Sbjct: 118 YPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTASVPTFRLNFHVRRLVNAGY 177
Query: 164 KVGVVKQTETAAIKAHGLGKAGPFGRGLSALYTKATL 54
K+GVVKQTETAAIK+HG + GPF RGLSALYTKATL
Sbjct: 178 KIGVVKQTETAAIKSHGANRTGPFFRGLSALYTKATL 214
>XP_010035123.1 PREDICTED: DNA mismatch repair protein MSH3 [Eucalyptus grandis]
Length = 1093
Score = 251 bits (642), Expect = 3e-73
Identities = 139/207 (67%), Positives = 155/207 (74%), Gaps = 13/207 (6%)
Frame = -2
Query: 635 GKQKQQVISRFFAPK-SNXXXXXXXXXXXXXXXXXXXPKIAATVTFSPAKRKVVSTLFPQ 459
GK KQQVISRFFAPK PKIAA V+FSPAKR++ S L
Sbjct: 3 GKPKQQVISRFFAPKPKTPPPRAADPSPPSPSPSTPPPKIAAVVSFSPAKRRLSSRL--A 60
Query: 458 TP-KKPKLSPHTLNPTP-----------SLQTFNKKYTPLEQQVVELKTKYPDILLMIEV 315
TP KKPKLSPHT NP P + + +KKYTPLE+QVVELK +YPD+LLM+EV
Sbjct: 61 TPLKKPKLSPHTQNPVPPPPLQRPHKKETAEPSSKKYTPLEEQVVELKERYPDVLLMVEV 120
Query: 314 GYKFRFFGEDAEIAAKVLRIYAHVDHSFMTASIPTFRLNVHLRRLVNAGYKVGVVKQTET 135
GYK+RFFGEDAE+AA+VL IYAH+DHSFMTASIPTFRLNVH+RRLVNAGYKVGVVKQTET
Sbjct: 121 GYKYRFFGEDAEVAARVLGIYAHMDHSFMTASIPTFRLNVHVRRLVNAGYKVGVVKQTET 180
Query: 134 AAIKAHGLGKAGPFGRGLSALYTKATL 54
AAIKAHG + GPF RGLSALYTKATL
Sbjct: 181 AAIKAHGSNRLGPFCRGLSALYTKATL 207
>XP_006413297.1 hypothetical protein EUTSA_v10024274mg [Eutrema salsugineum]
ESQ54750.1 hypothetical protein EUTSA_v10024274mg
[Eutrema salsugineum]
Length = 1088
Score = 251 bits (640), Expect = 5e-73
Identities = 137/216 (63%), Positives = 158/216 (73%), Gaps = 21/216 (9%)
Frame = -2
Query: 638 MGKQKQQVISRFFAPKSNXXXXXXXXXXXXXXXXXXXPKIAATVTFSPAKRKVVST-LFP 462
MGKQKQQVISRFFAPK KI+ATV+FSP+KRK++S L
Sbjct: 1 MGKQKQQVISRFFAPKPKSLPQEPNPVAESSTPPP---KISATVSFSPSKRKLLSDHLSA 57
Query: 461 QTPKKPKLSPHTLNPTPS-------LQTF-------------NKKYTPLEQQVVELKTKY 342
+PKK KLSPHT NPTP LQ F ++KYTPLEQQVVELK+KY
Sbjct: 58 ASPKKHKLSPHTQNPTPDPSLHRRFLQRFLEPSPEESAPESSSRKYTPLEQQVVELKSKY 117
Query: 341 PDILLMIEVGYKFRFFGEDAEIAAKVLRIYAHVDHSFMTASIPTFRLNVHLRRLVNAGYK 162
PD++LM+EVGY++RFFGEDAEIAA+VL IYAH+DH+FMTASIPTFRL H+RRLVNAGYK
Sbjct: 118 PDVILMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTASIPTFRLQFHVRRLVNAGYK 177
Query: 161 VGVVKQTETAAIKAHGLGKAGPFGRGLSALYTKATL 54
+GVVKQTETAAIK+HG + GPF RGLSALYTKATL
Sbjct: 178 IGVVKQTETAAIKSHGANRTGPFFRGLSALYTKATL 213
>XP_002510803.1 PREDICTED: DNA mismatch repair protein MSH3 [Ricinus communis]
EEF51405.1 DNA mismatch repair protein MSH3, putative
[Ricinus communis]
Length = 1100
Score = 250 bits (638), Expect = 1e-72
Identities = 141/221 (63%), Positives = 158/221 (71%), Gaps = 26/221 (11%)
Frame = -2
Query: 638 MGKQKQQVISRFFAPK----SNXXXXXXXXXXXXXXXXXXXPKIAATVTFSPAKRKVVST 471
MGKQKQQVISRFFAPK S PKI ATV+FSPAKRK++ST
Sbjct: 1 MGKQKQQVISRFFAPKPKTTSPSTPPSPSASPPPTTPTPSSPKITATVSFSPAKRKLLST 60
Query: 470 LFPQTPKKPKLSPHTLNPTPSLQ----------------------TFNKKYTPLEQQVVE 357
TPKKPKLS + + PTPS ++ +KYTPLE+QV++
Sbjct: 61 HLTSTPKKPKLSDNDI-PTPSSSLHQKFLNKFLEPSSPEIPQPPSSYPRKYTPLEKQVLD 119
Query: 356 LKTKYPDILLMIEVGYKFRFFGEDAEIAAKVLRIYAHVDHSFMTASIPTFRLNVHLRRLV 177
LKTKYPD+LLMIEVGYK+RFFGEDAEIA +VL IYAH DH+FMTASIPTFRLNVH+RRLV
Sbjct: 120 LKTKYPDVLLMIEVGYKYRFFGEDAEIAGRVLGIYAHKDHNFMTASIPTFRLNVHVRRLV 179
Query: 176 NAGYKVGVVKQTETAAIKAHGLGKAGPFGRGLSALYTKATL 54
+AGYKVGVVKQTETAAIKAHG KAGPF RGLSALYTKATL
Sbjct: 180 SAGYKVGVVKQTETAAIKAHGDNKAGPFCRGLSALYTKATL 220