BLASTX nr result

ID: Phellodendron21_contig00036175 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00036175
         (291 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_019054600.1 PREDICTED: probable pre-mRNA-splicing factor ATP-...    50   1e-06

>XP_019054600.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase DEAH2 isoform X2 [Nelumbo nucifera]
          Length = 561

 Score = 49.7 bits (117), Expect(2) = 1e-06
 Identities = 25/27 (92%), Positives = 25/27 (92%)
 Frame = -2

Query: 104 YASADLPWASSVITNYSFFSTQLLCPA 24
           YASADLPWASSVIT  SFFSTQLLCPA
Sbjct: 536 YASADLPWASSVIT-ISFFSTQLLCPA 561



 Score = 30.0 bits (66), Expect(2) = 1e-06
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -1

Query: 201 PRLACTIGF*VLMQIVAVSQYSHMKQLVSSRL 106
           P   C+     +  +++VSQYS MKQ+VSSRL
Sbjct: 504 PEFNCSNEILSISAMLSVSQYSLMKQMVSSRL 535


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