BLASTX nr result

ID: Phellodendron21_contig00035790 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00035790
         (351 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KVH61723.1 hypothetical protein Ccrd_025652 [Cynara cardunculus ...   109   1e-27
EEF27248.1 conserved hypothetical protein [Ricinus communis]           81   5e-18
XP_010095217.1 hypothetical protein L484_003934 [Morus notabilis...    74   5e-15
XP_013442474.1 hypothetical protein MTR_0165s0050 [Medicago trun...    65   3e-11
CDY65733.1 BnaCnng48520D [Brassica napus]                              62   1e-08

>KVH61723.1 hypothetical protein Ccrd_025652 [Cynara cardunculus var. scolymus]
          Length = 201

 Score =  109 bits (272), Expect = 1e-27
 Identities = 57/77 (74%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
 Frame = +2

Query: 29  LSSGSPLLAEMNVSEGGWVLF--PGRAGGEGHKRALPARKRGKRRCHLSRPVSRGVGNPD 202
           LSSGS LLAEMN SEGGW+L+   GR      +   P RKRGKRRCHLSRPV RGVGNPD
Sbjct: 37  LSSGSSLLAEMNGSEGGWILYFRAGRGVKAIREDCPPVRKRGKRRCHLSRPVPRGVGNPD 96

Query: 203 RLRESLALFSPSFRQQR 253
           RLRESL LFSPSFRQQR
Sbjct: 97  RLRESLVLFSPSFRQQR 113


>EEF27248.1 conserved hypothetical protein [Ricinus communis]
          Length = 66

 Score = 80.9 bits (198), Expect = 5e-18
 Identities = 41/54 (75%), Positives = 44/54 (81%)
 Frame = +3

Query: 63  MYQKGAGFYFRAGREVKAIREPYRQGREEKGAVIYLDQFPEALEIQTGSENHWR 224
           M  +GAGFYF   REVKAIRE    G+EE+ AVIYLDQFPEALEIQTGSENHWR
Sbjct: 1   MAARGAGFYFLTEREVKAIREDCPPGKEER-AVIYLDQFPEALEIQTGSENHWR 53


>XP_010095217.1 hypothetical protein L484_003934 [Morus notabilis] EXB58678.1
           hypothetical protein L484_003934 [Morus notabilis]
          Length = 78

 Score = 73.6 bits (179), Expect = 5e-15
 Identities = 36/39 (92%), Positives = 36/39 (92%)
 Frame = +3

Query: 168 LDQFPEALEIQTGSENHWRYLALRFANKEVILDDFPFLP 284
           LDQFPEALEIQTGSENHWR   LRFANKEVILDDFPFLP
Sbjct: 42  LDQFPEALEIQTGSENHWR--DLRFANKEVILDDFPFLP 78


>XP_013442474.1 hypothetical protein MTR_0165s0050 [Medicago truncatula] KEH16499.1
           hypothetical protein MTR_0165s0050 [Medicago truncatula]
          Length = 108

 Score = 64.7 bits (156), Expect = 3e-11
 Identities = 33/44 (75%), Positives = 37/44 (84%), Gaps = 2/44 (4%)
 Frame = +3

Query: 75  GAGFYFRAGREVKAIREPYRQGREEK--GAVIYLDQFPEALEIQ 200
           G GFYFRAGREVKAIRE    G+EE+  GAVIYLDQFPEAL+I+
Sbjct: 11  GTGFYFRAGREVKAIREDCPPGKEERCQGAVIYLDQFPEALKIK 54


>CDY65733.1 BnaCnng48520D [Brassica napus]
          Length = 625

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 40/66 (60%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
 Frame = -2

Query: 191 QRLGKLVEIDDSAFFLSSLPVGLSYGLHLPPGPEIEPSP---LLIHSFLQAGGIQS*ASL 21
           +++ + VEIDDSA    +     SYGLHLPPG EIE SP    LIHSFLQA   QS ASL
Sbjct: 94  EKIREWVEIDDSAEERLAGREIFSYGLHLPPGLEIESSPPPLFLIHSFLQA---QSVASL 150

Query: 20  LLHNLK 3
           LLHNLK
Sbjct: 151 LLHNLK 156


Top