BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00035701
         (404 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP36396.1 Retrovirus-related Pol polyprotein from transposon TN...    55   3e-06
KYP64673.1 Retrovirus-related Pol polyprotein from transposon TN...    55   4e-06

>KYP36396.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 485

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 3/120 (2%)
 Frame = -2

Query: 358 SASVAAGNSTTCLSGALTVTSDQINKEWILDSGYSFHMSPEKH*FINLRNT*QGSVYI*H 179
           SA +AA +     +  L VT+ Q  K+W++DSG S+HM P+K  F  L+    G+V +  
Sbjct: 205 SADIAAISDGYESADVLVVTTSQTQKDWVMDSGCSYHMCPKKDYFETLKLKEGGTVLLGD 264

Query: 178 LQDSGNWGYYT*TS*WEN*NSY*CE---ICPDLKRNLISLGSLDELGFTYKACKGNMYVL 8
                  G  T      +   Y  +     PDLKRNLIS+   D LG+  K   G + +L
Sbjct: 265 DHPCQVQGIGTVRLKMFDNREYILKDVRYVPDLKRNLISISMFDSLGYATKTQHGVLKIL 324


>KYP64673.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 780

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 3/120 (2%)
 Frame = -2

Query: 358 SASVAAGNSTTCLSGALTVTSDQINKEWILDSGYSFHMSPEKH*FINLRNT*QGSVYI*H 179
           SA +AA +     +  L VT+ Q  K+W++DSG S+HM P+K  F  L+    G+V +  
Sbjct: 259 SADIAAISDGYESADVLVVTTSQTQKDWVMDSGCSYHMCPKKDYFETLKLKEGGTVLLGD 318

Query: 178 LQDSGNWGYYT*TS*WEN*NSY*CE---ICPDLKRNLISLGSLDELGFTYKACKGNMYVL 8
                  G  T      +   Y  +     PDLKRNLIS+   D LG+  K   G + +L
Sbjct: 319 DHPCQVQGIGTVRLKMFDNREYILKDVRYVPDLKRNLISISMFDSLGYATKTQHGVLKIL 378