BLASTX nr result

ID: Phellodendron21_contig00035486 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00035486
         (478 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006422133.1 hypothetical protein CICLE_v10004564mg [Citrus cl...    52   2e-06
XP_006422132.1 hypothetical protein CICLE_v10004564mg [Citrus cl...    52   2e-06

>XP_006422133.1 hypothetical protein CICLE_v10004564mg [Citrus clementina]
           XP_006490555.1 PREDICTED: cyclic nucleotide-gated ion
           channel 1 [Citrus sinensis] ESR35373.1 hypothetical
           protein CICLE_v10004564mg [Citrus clementina] KDO56102.1
           hypothetical protein CISIN_1g007183mg [Citrus sinensis]
          Length = 614

 Score = 51.6 bits (122), Expect(2) = 2e-06
 Identities = 27/38 (71%), Positives = 30/38 (78%), Gaps = 3/38 (7%)
 Frame = +2

Query: 164 FSFGNKQIYLQHKATRPKEMSVR---MNEHMSIQKLSK 268
           F  GN QIYLQ KATRPKEM++R   MNEHM IQKLS+
Sbjct: 358 FLIGNIQIYLQTKATRPKEMTLRMQEMNEHMPIQKLSR 395



 Score = 27.3 bits (59), Expect(2) = 2e-06
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 7/29 (24%)
 Frame = +1

Query: 289 IW*KPD-------IDVLPKELVRFIKRKL 354
           IW KPD       + +LPKEL R IKR+L
Sbjct: 408 IWRKPDTIDVESSLSILPKELRRNIKREL 436


>XP_006422132.1 hypothetical protein CICLE_v10004564mg [Citrus clementina]
           ESR35372.1 hypothetical protein CICLE_v10004564mg
           [Citrus clementina] KDO56104.1 hypothetical protein
           CISIN_1g007183mg [Citrus sinensis]
          Length = 438

 Score = 51.6 bits (122), Expect(2) = 2e-06
 Identities = 27/38 (71%), Positives = 30/38 (78%), Gaps = 3/38 (7%)
 Frame = +2

Query: 164 FSFGNKQIYLQHKATRPKEMSVR---MNEHMSIQKLSK 268
           F  GN QIYLQ KATRPKEM++R   MNEHM IQKLS+
Sbjct: 182 FLIGNIQIYLQTKATRPKEMTLRMQEMNEHMPIQKLSR 219



 Score = 27.3 bits (59), Expect(2) = 2e-06
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 7/29 (24%)
 Frame = +1

Query: 289 IW*KPD-------IDVLPKELVRFIKRKL 354
           IW KPD       + +LPKEL R IKR+L
Sbjct: 232 IWRKPDTIDVESSLSILPKELRRNIKREL 260


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