BLASTX nr result

ID: Phellodendron21_contig00035333 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00035333
         (318 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006448925.1 hypothetical protein CICLE_v10014454mg [Citrus cl...    88   4e-18
XP_015382577.1 PREDICTED: 30-kDa cleavage and polyadenylation sp...    88   5e-18
XP_006448924.1 hypothetical protein CICLE_v10014454mg [Citrus cl...    88   5e-18
XP_018828092.1 PREDICTED: 30-kDa cleavage and polyadenylation sp...    71   4e-12
XP_016715196.1 PREDICTED: 30-kDa cleavage and polyadenylation sp...    69   3e-11
XP_016734575.1 PREDICTED: 30-kDa cleavage and polyadenylation sp...    69   3e-11
XP_017637668.1 PREDICTED: 30-kDa cleavage and polyadenylation sp...    69   3e-11
XP_012436534.1 PREDICTED: 30-kDa cleavage and polyadenylation sp...    69   3e-11
KJB47903.1 hypothetical protein B456_008G046800 [Gossypium raimo...    69   3e-11
XP_017971687.1 PREDICTED: 30-kDa cleavage and polyadenylation sp...    68   5e-11
EOX96971.1 Cleavage and polyadenylation specificity factor 30 [T...    68   5e-11
GAV74879.1 YTH domain-containing protein [Cephalotus follicularis]     68   5e-11
XP_010687042.1 PREDICTED: 30-kDa cleavage and polyadenylation sp...    67   7e-11
XP_010241185.1 PREDICTED: 30-kDa cleavage and polyadenylation sp...    67   9e-11
XP_011011896.1 PREDICTED: 30-kDa cleavage and polyadenylation sp...    66   2e-10
CAN61344.1 hypothetical protein VITISV_022201 [Vitis vinifera]         65   2e-10
XP_002317344.2 hypothetical protein POPTR_0011s09210g [Populus t...    65   3e-10
CBI30994.3 unnamed protein product, partial [Vitis vinifera]           65   3e-10
XP_002281594.1 PREDICTED: 30-kDa cleavage and polyadenylation sp...    65   3e-10
XP_002300333.2 zinc finger family protein [Populus trichocarpa] ...    65   4e-10

>XP_006448925.1 hypothetical protein CICLE_v10014454mg [Citrus clementina]
           ESR62165.1 hypothetical protein CICLE_v10014454mg
           [Citrus clementina]
          Length = 672

 Score = 87.8 bits (216), Expect = 4e-18
 Identities = 44/78 (56%), Positives = 44/78 (56%)
 Frame = +3

Query: 45  GTASQXXXXXXXMMWAGQMPLXXXXXXXXXXXXXXXXXXXXDGFSYGVTPDGFPMPDLFS 224
           GTASQ       MMW G MPL                    DGFSYGVTPDGFPMPDLF 
Sbjct: 428 GTASQGRGRGRGMMWPGPMPLARGARPVPGMRGFPPMMIGADGFSYGVTPDGFPMPDLFG 487

Query: 225 VAPRPFPSYGRMFSGDFT 278
           VAPRPF  YG  FSGDFT
Sbjct: 488 VAPRPFAPYGPRFSGDFT 505


>XP_015382577.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
           30 [Citrus sinensis] KDO75297.1 hypothetical protein
           CISIN_1g005338mg [Citrus sinensis]
          Length = 701

 Score = 87.8 bits (216), Expect = 5e-18
 Identities = 44/78 (56%), Positives = 44/78 (56%)
 Frame = +3

Query: 45  GTASQXXXXXXXMMWAGQMPLXXXXXXXXXXXXXXXXXXXXDGFSYGVTPDGFPMPDLFS 224
           GTASQ       MMW G MPL                    DGFSYGVTPDGFPMPDLF 
Sbjct: 457 GTASQGRGRGRGMMWPGPMPLARGARPVPGMRGFPPMMIGADGFSYGVTPDGFPMPDLFG 516

Query: 225 VAPRPFPSYGRMFSGDFT 278
           VAPRPF  YG  FSGDFT
Sbjct: 517 VAPRPFAPYGPRFSGDFT 534


>XP_006448924.1 hypothetical protein CICLE_v10014454mg [Citrus clementina]
           ESR62164.1 hypothetical protein CICLE_v10014454mg
           [Citrus clementina]
          Length = 701

 Score = 87.8 bits (216), Expect = 5e-18
 Identities = 44/78 (56%), Positives = 44/78 (56%)
 Frame = +3

Query: 45  GTASQXXXXXXXMMWAGQMPLXXXXXXXXXXXXXXXXXXXXDGFSYGVTPDGFPMPDLFS 224
           GTASQ       MMW G MPL                    DGFSYGVTPDGFPMPDLF 
Sbjct: 457 GTASQGRGRGRGMMWPGPMPLARGARPVPGMRGFPPMMIGADGFSYGVTPDGFPMPDLFG 516

Query: 225 VAPRPFPSYGRMFSGDFT 278
           VAPRPF  YG  FSGDFT
Sbjct: 517 VAPRPFAPYGPRFSGDFT 534


>XP_018828092.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
           30-like [Juglans regia]
          Length = 704

 Score = 70.9 bits (172), Expect = 4e-12
 Identities = 37/79 (46%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
 Frame = +3

Query: 45  GTASQXXXXXXXMMWAGQMPLXXXXXXXXXXXXXXXXXXXXDGFSYG-VTPDGFPMPDLF 221
           G A Q       +MW   MPL                    DG SYG +TPDGFPMPDLF
Sbjct: 458 GAAMQGRGRGRGIMWPPHMPLARGARPMPGTQGFPPVIMGADGLSYGPITPDGFPMPDLF 517

Query: 222 SVAPRPFPSYGRMFSGDFT 278
            V PRPF  YG  FSGDFT
Sbjct: 518 GVGPRPFAPYGPRFSGDFT 536


>XP_016715196.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
           30-like [Gossypium hirsutum]
          Length = 697

 Score = 68.6 bits (166), Expect = 3e-11
 Identities = 39/80 (48%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
 Frame = +3

Query: 42  FGTASQXXXXXXXMMWAGQMPLXXXXXXXXXXXXXXXXXXXXDGFSYG-VTPDGFPMPDL 218
           FG A+Q       +MW   MPL                    DGFSYG VTPDGF MPDL
Sbjct: 452 FGAAAQGRGRGRGIMWPPHMPLGRGARPMPGMRGFPPMMMGGDGFSYGPVTPDGFGMPDL 511

Query: 219 FSVAPRPFPSYGRMFSGDFT 278
           F  APRPF  YG  FSGDFT
Sbjct: 512 FG-APRPFAPYGPRFSGDFT 530


>XP_016734575.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
           30-like [Gossypium hirsutum]
          Length = 698

 Score = 68.6 bits (166), Expect = 3e-11
 Identities = 39/80 (48%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
 Frame = +3

Query: 42  FGTASQXXXXXXXMMWAGQMPLXXXXXXXXXXXXXXXXXXXXDGFSYG-VTPDGFPMPDL 218
           FG A+Q       +MW   MPL                    DGFSYG VTPDGF MPDL
Sbjct: 453 FGAAAQGRGRGRGIMWPPHMPLARGARPMPGMRGFPPMMMGGDGFSYGPVTPDGFGMPDL 512

Query: 219 FSVAPRPFPSYGRMFSGDFT 278
           F  APRPF  YG  FSGDFT
Sbjct: 513 FG-APRPFAPYGPRFSGDFT 531


>XP_017637668.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
           30 [Gossypium arboreum]
          Length = 699

 Score = 68.6 bits (166), Expect = 3e-11
 Identities = 39/80 (48%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
 Frame = +3

Query: 42  FGTASQXXXXXXXMMWAGQMPLXXXXXXXXXXXXXXXXXXXXDGFSYG-VTPDGFPMPDL 218
           FG A+Q       +MW   MPL                    DGFSYG VTPDGF MPDL
Sbjct: 454 FGAAAQGRGRGRGIMWPPHMPLGRGARPMPGMRGFPPMMMGGDGFSYGPVTPDGFGMPDL 513

Query: 219 FSVAPRPFPSYGRMFSGDFT 278
           F  APRPF  YG  FSGDFT
Sbjct: 514 FG-APRPFAPYGPRFSGDFT 532


>XP_012436534.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
           30 [Gossypium raimondii] KJB47902.1 hypothetical protein
           B456_008G046800 [Gossypium raimondii]
          Length = 700

 Score = 68.6 bits (166), Expect = 3e-11
 Identities = 39/80 (48%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
 Frame = +3

Query: 42  FGTASQXXXXXXXMMWAGQMPLXXXXXXXXXXXXXXXXXXXXDGFSYG-VTPDGFPMPDL 218
           FG A+Q       +MW   MPL                    DGFSYG VTPDGF MPDL
Sbjct: 455 FGAAAQGRGRGRGIMWPPHMPLARGARPMPGMRGFPPMMMGGDGFSYGPVTPDGFGMPDL 514

Query: 219 FSVAPRPFPSYGRMFSGDFT 278
           F  APRPF  YG  FSGDFT
Sbjct: 515 FG-APRPFAPYGPRFSGDFT 533


>KJB47903.1 hypothetical protein B456_008G046800 [Gossypium raimondii]
          Length = 701

 Score = 68.6 bits (166), Expect = 3e-11
 Identities = 39/80 (48%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
 Frame = +3

Query: 42  FGTASQXXXXXXXMMWAGQMPLXXXXXXXXXXXXXXXXXXXXDGFSYG-VTPDGFPMPDL 218
           FG A+Q       +MW   MPL                    DGFSYG VTPDGF MPDL
Sbjct: 456 FGAAAQGRGRGRGIMWPPHMPLARGARPMPGMRGFPPMMMGGDGFSYGPVTPDGFGMPDL 515

Query: 219 FSVAPRPFPSYGRMFSGDFT 278
           F  APRPF  YG  FSGDFT
Sbjct: 516 FG-APRPFAPYGPRFSGDFT 534


>XP_017971687.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
           30 [Theobroma cacao] XP_007041140.2 PREDICTED: 30-kDa
           cleavage and polyadenylation specificity factor 30
           [Theobroma cacao]
          Length = 698

 Score = 67.8 bits (164), Expect = 5e-11
 Identities = 38/80 (47%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
 Frame = +3

Query: 42  FGTASQXXXXXXXMMWAGQMPLXXXXXXXXXXXXXXXXXXXXDGFSYG-VTPDGFPMPDL 218
           F  A+Q       +MW   MPL                    DGFSYG VTPDGF +PDL
Sbjct: 453 FSAAAQGRGRGRGVMWPPHMPLARGARPMPGMRGFPPMMMGGDGFSYGPVTPDGFGVPDL 512

Query: 219 FSVAPRPFPSYGRMFSGDFT 278
           F  APRPFP YG  FSGDFT
Sbjct: 513 FG-APRPFPPYGPRFSGDFT 531


>EOX96971.1 Cleavage and polyadenylation specificity factor 30 [Theobroma
           cacao]
          Length = 698

 Score = 67.8 bits (164), Expect = 5e-11
 Identities = 38/80 (47%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
 Frame = +3

Query: 42  FGTASQXXXXXXXMMWAGQMPLXXXXXXXXXXXXXXXXXXXXDGFSYG-VTPDGFPMPDL 218
           F  A+Q       +MW   MPL                    DGFSYG VTPDGF +PDL
Sbjct: 453 FSAAAQGRGRGRGVMWPPHMPLARGARPMPGMRGFPPMMMGGDGFSYGPVTPDGFGVPDL 512

Query: 219 FSVAPRPFPSYGRMFSGDFT 278
           F  APRPFP YG  FSGDFT
Sbjct: 513 FG-APRPFPPYGPRFSGDFT 531


>GAV74879.1 YTH domain-containing protein [Cephalotus follicularis]
          Length = 702

 Score = 67.8 bits (164), Expect = 5e-11
 Identities = 35/67 (52%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = +3

Query: 81  MMWAGQMPLXXXXXXXXXXXXXXXXXXXXDGFSYG-VTPDGFPMPDLFSVAPRPFPSYGR 257
           MMW   +PL                    DGFSYG VTPDGF MPDLF V PRPF  YG 
Sbjct: 468 MMWPPHLPLARGARPIPGMRGFPPVMMGADGFSYGPVTPDGFAMPDLFGVGPRPFGPYGP 527

Query: 258 MFSGDFT 278
            FSGDFT
Sbjct: 528 RFSGDFT 534


>XP_010687042.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
           30 [Beta vulgaris subsp. vulgaris] KMT03954.1
           hypothetical protein BVRB_8g187630 [Beta vulgaris subsp.
           vulgaris]
          Length = 680

 Score = 67.4 bits (163), Expect = 7e-11
 Identities = 34/78 (43%), Positives = 37/78 (47%)
 Frame = +3

Query: 45  GTASQXXXXXXXMMWAGQMPLXXXXXXXXXXXXXXXXXXXXDGFSYGVTPDGFPMPDLFS 224
           G A Q       MMW    P+                    DGF+YG  PDGFPMPD F 
Sbjct: 447 GLAIQGRGRGRGMMWPPNFPMGRGVRPMQGMRAFPPGMMGVDGFTYGPGPDGFPMPDPFG 506

Query: 225 VAPRPFPSYGRMFSGDFT 278
           +APRPF  YG  FSGDFT
Sbjct: 507 MAPRPFMPYGPRFSGDFT 524


>XP_010241185.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
           30 [Nelumbo nucifera]
          Length = 715

 Score = 67.0 bits (162), Expect = 9e-11
 Identities = 36/77 (46%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = +3

Query: 51  ASQXXXXXXXMMWAGQMPLXXXXXXXXXXXXXXXXXXXXDGFSYG-VTPDGFPMPDLFSV 227
           A+Q       +MW   MPL                    DGFSYG VTPDGF MPDLF +
Sbjct: 457 AAQGRGRGRGVMWPPHMPLARGGRPIPGIRGFPPVMMGADGFSYGAVTPDGFSMPDLFGI 516

Query: 228 APRPFPSYGRMFSGDFT 278
           APR F  YG  FSGDFT
Sbjct: 517 APRAFAPYGPRFSGDFT 533


>XP_011011896.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
           30-like [Populus euphratica]
          Length = 692

 Score = 66.2 bits (160), Expect = 2e-10
 Identities = 36/79 (45%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
 Frame = +3

Query: 45  GTASQXXXXXXXMMWAGQMPLXXXXXXXXXXXXXXXXXXXXDGFSYG-VTPDGFPMPDLF 221
           G A+Q       +MW   +P+                    DGFSYG VTPD F MPDLF
Sbjct: 450 GAAAQGRGRGRGIMWPPHIPIARGARPIHGMRAFPPMMMGADGFSYGAVTPDSFGMPDLF 509

Query: 222 SVAPRPFPSYGRMFSGDFT 278
            VAPR F SYG  FSGDFT
Sbjct: 510 GVAPRGFASYGPRFSGDFT 528


>CAN61344.1 hypothetical protein VITISV_022201 [Vitis vinifera]
          Length = 299

 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 35/79 (44%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = +3

Query: 45  GTASQXXXXXXXMMWAGQMPLXXXXXXXXXXXXXXXXXXXXDGFSYG-VTPDGFPMPDLF 221
           G A+Q       +MW   MPL                    DGFSY  V PDGF MPD+F
Sbjct: 71  GPAAQGRGRGRGIMWPPHMPLARGARPIPGMRGFPPVMMGADGFSYSAVPPDGFAMPDIF 130

Query: 222 SVAPRPFPSYGRMFSGDFT 278
            V PR FP YG  FSGDFT
Sbjct: 131 GVGPRAFPPYGPRFSGDFT 149


>XP_002317344.2 hypothetical protein POPTR_0011s09210g [Populus trichocarpa]
           EEE97956.2 hypothetical protein POPTR_0011s09210g
           [Populus trichocarpa]
          Length = 381

 Score = 65.5 bits (158), Expect = 3e-10
 Identities = 33/78 (42%), Positives = 37/78 (47%)
 Frame = +3

Query: 45  GTASQXXXXXXXMMWAGQMPLXXXXXXXXXXXXXXXXXXXXDGFSYGVTPDGFPMPDLFS 224
           G A+Q       +MW   +P+                    DGFSYG  PD F MPDLF 
Sbjct: 140 GAAAQGRGRGRGIMWPPHIPIARGARPIPGMRAFPPMMMGADGFSYGAVPDSFGMPDLFG 199

Query: 225 VAPRPFPSYGRMFSGDFT 278
           VAPR F  YG  FSGDFT
Sbjct: 200 VAPRGFAPYGPRFSGDFT 217


>CBI30994.3 unnamed protein product, partial [Vitis vinifera]
          Length = 485

 Score = 65.5 bits (158), Expect = 3e-10
 Identities = 35/79 (44%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = +3

Query: 45  GTASQXXXXXXXMMWAGQMPLXXXXXXXXXXXXXXXXXXXXDGFSYG-VTPDGFPMPDLF 221
           G A+Q       +MW   MPL                    DGFSY  V PDGF MPD+F
Sbjct: 373 GPAAQGRGRGRGIMWPPHMPLARGARPIPSMRGFPPVMMGADGFSYSAVPPDGFAMPDIF 432

Query: 222 SVAPRPFPSYGRMFSGDFT 278
            V PR FP YG  FSGDFT
Sbjct: 433 GVGPRAFPPYGPRFSGDFT 451


>XP_002281594.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
           30 [Vitis vinifera]
          Length = 673

 Score = 65.5 bits (158), Expect = 3e-10
 Identities = 35/79 (44%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = +3

Query: 45  GTASQXXXXXXXMMWAGQMPLXXXXXXXXXXXXXXXXXXXXDGFSYG-VTPDGFPMPDLF 221
           G A+Q       +MW   MPL                    DGFSY  V PDGF MPD+F
Sbjct: 446 GPAAQGRGRGRGIMWPPHMPLARGARPIPSMRGFPPVMMGADGFSYSAVPPDGFAMPDIF 505

Query: 222 SVAPRPFPSYGRMFSGDFT 278
            V PR FP YG  FSGDFT
Sbjct: 506 GVGPRAFPPYGPRFSGDFT 524


>XP_002300333.2 zinc finger family protein [Populus trichocarpa] EEE85138.2 zinc
           finger family protein [Populus trichocarpa]
          Length = 669

 Score = 65.1 bits (157), Expect = 4e-10
 Identities = 36/79 (45%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = +3

Query: 45  GTASQXXXXXXXMMWAGQMPLXXXXXXXXXXXXXXXXXXXXDGFSYG-VTPDGFPMPDLF 221
           G A+Q       MMW    P+                    DGFSYG VTPD F MPDLF
Sbjct: 459 GPAAQGRGRGRGMMWPSHNPMARGARPIPGIRGFPPMMMGADGFSYGAVTPDSFGMPDLF 518

Query: 222 SVAPRPFPSYGRMFSGDFT 278
            VA R FP YG  FSGDFT
Sbjct: 519 GVASRGFPPYGPRFSGDFT 537


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