BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00034618
         (919 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006475818.1 PREDICTED: mediator of RNA polymerase II transcri...   128   1e-38
KDO80288.1 hypothetical protein CISIN_1g006207mg [Citrus sinensis]    128   1e-38
XP_006450970.1 hypothetical protein CICLE_v10007689mg [Citrus cl...   129   6e-30
XP_015866413.1 PREDICTED: mediator of RNA polymerase II transcri...    95   6e-28
XP_008242750.1 PREDICTED: mediator of RNA polymerase II transcri...    94   8e-28
XP_007204608.1 hypothetical protein PRUPE_ppa002594mg [Prunus pe...    94   8e-28
XP_015883833.1 PREDICTED: mediator of RNA polymerase II transcri...    94   1e-27
XP_004300164.1 PREDICTED: mediator of RNA polymerase II transcri...    87   1e-26
XP_002285089.1 PREDICTED: mediator of RNA polymerase II transcri...    90   2e-26
XP_016690182.1 PREDICTED: mediator of RNA polymerase II transcri...    91   6e-26
XP_016690183.1 PREDICTED: mediator of RNA polymerase II transcri...    91   6e-26
XP_016690184.1 PREDICTED: mediator of RNA polymerase II transcri...    91   6e-26
XP_016690185.1 PREDICTED: mediator of RNA polymerase II transcri...    91   6e-26
OAY47068.1 hypothetical protein MANES_06G049700 [Manihot esculenta]    89   7e-26
XP_006374395.1 hypothetical protein POPTR_0015s06780g [Populus t...    92   1e-25
ABK92467.1 unknown [Populus trichocarpa]                               92   1e-25
XP_016744582.1 PREDICTED: mediator of RNA polymerase II transcri...    86   5e-25
XP_016744583.1 PREDICTED: mediator of RNA polymerase II transcri...    86   5e-25
XP_016728245.1 PREDICTED: mediator of RNA polymerase II transcri...    86   6e-25
XP_017614271.1 PREDICTED: mediator of RNA polymerase II transcri...    86   6e-25

>XP_006475818.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
           [Citrus sinensis] KDO80287.1 hypothetical protein
           CISIN_1g006207mg [Citrus sinensis]
          Length = 657

 Score =  128 bits (322), Expect(2) = 1e-38
 Identities = 64/81 (79%), Positives = 69/81 (85%)
 Frame = +3

Query: 3   PSSQGDLSVDSLATQNVESAVLPLDSLDGVKLAEEKDDILKKSRGYPNRLSYEIYLQHVC 182
           PS+QGDLSVDS   QNVES +LPLDS DGVKLAEEKDDIL+KS GYPN L+YEIYLQ V 
Sbjct: 336 PSNQGDLSVDSWVNQNVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVF 395

Query: 183 HEHLYARAKNKPISAGTWVSG 245
           HE+LY RAKNKPIS GT VSG
Sbjct: 396 HEYLYGRAKNKPISTGTRVSG 416



 Score = 60.5 bits (145), Expect(2) = 1e-38
 Identities = 34/65 (52%), Positives = 42/65 (64%)
 Frame = +1

Query: 253 KDGSGLLGHFCMSLAHGIFSNKVCVELENVVSSVASIVKGVPHIEAYTTVPHERSNEATA 432
           KDGSGLLGHFC+SLAH IFSNKV VELEN V  V  +     H+ ++ T  H R++  T 
Sbjct: 420 KDGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYL-----HLVSHPTW-HSRTSSWTV 473

Query: 433 KRRAP 447
             + P
Sbjct: 474 FLKVP 478


>KDO80288.1 hypothetical protein CISIN_1g006207mg [Citrus sinensis]
          Length = 546

 Score =  128 bits (322), Expect(2) = 1e-38
 Identities = 64/81 (79%), Positives = 69/81 (85%)
 Frame = +3

Query: 3   PSSQGDLSVDSLATQNVESAVLPLDSLDGVKLAEEKDDILKKSRGYPNRLSYEIYLQHVC 182
           PS+QGDLSVDS   QNVES +LPLDS DGVKLAEEKDDIL+KS GYPN L+YEIYLQ V 
Sbjct: 225 PSNQGDLSVDSWVNQNVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVF 284

Query: 183 HEHLYARAKNKPISAGTWVSG 245
           HE+LY RAKNKPIS GT VSG
Sbjct: 285 HEYLYGRAKNKPISTGTRVSG 305



 Score = 60.5 bits (145), Expect(2) = 1e-38
 Identities = 34/65 (52%), Positives = 42/65 (64%)
 Frame = +1

Query: 253 KDGSGLLGHFCMSLAHGIFSNKVCVELENVVSSVASIVKGVPHIEAYTTVPHERSNEATA 432
           KDGSGLLGHFC+SLAH IFSNKV VELEN V  V  +     H+ ++ T  H R++  T 
Sbjct: 309 KDGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYL-----HLVSHPTW-HSRTSSWTV 362

Query: 433 KRRAP 447
             + P
Sbjct: 363 FLKVP 367


>XP_006450970.1 hypothetical protein CICLE_v10007689mg [Citrus clementina]
           ESR64210.1 hypothetical protein CICLE_v10007689mg
           [Citrus clementina]
          Length = 657

 Score =  129 bits (324), Expect = 6e-30
 Identities = 68/108 (62%), Positives = 77/108 (71%)
 Frame = +3

Query: 3   PSSQGDLSVDSLATQNVESAVLPLDSLDGVKLAEEKDDILKKSRGYPNRLSYEIYLQHVC 182
           PS+QGDLSVDS   QNVES +LPLDS DGVKLAEEKDDIL+KS GYPN L+YEIYLQ V 
Sbjct: 336 PSNQGDLSVDSWVNQNVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVF 395

Query: 183 HEHLYARAKNKPISAGTWVSGQQKRRVWSSRSFLYVSGSRNIFKQSLR 326
           HE+LY RAKNKPIS GT VSG   +          +S +  IF   +R
Sbjct: 396 HEYLYGRAKNKPISTGTRVSGPPTKDGSGLLGHFCLSLAHRIFSNKVR 443



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 34/65 (52%), Positives = 42/65 (64%)
 Frame = +1

Query: 253 KDGSGLLGHFCMSLAHGIFSNKVCVELENVVSSVASIVKGVPHIEAYTTVPHERSNEATA 432
           KDGSGLLGHFC+SLAH IFSNKV VELEN V  V  +     H+ ++ T  H R++  T 
Sbjct: 420 KDGSGLLGHFCLSLAHRIFSNKVRVELENAVCGVPYL-----HLVSHPTW-HSRTSSWTV 473

Query: 433 KRRAP 447
             + P
Sbjct: 474 FLKVP 478


>XP_015866413.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
           isoform X1 [Ziziphus jujuba] XP_015866414.1 PREDICTED:
           mediator of RNA polymerase II transcription subunit 17
           isoform X2 [Ziziphus jujuba]
          Length = 659

 Score = 94.7 bits (234), Expect(2) = 6e-28
 Identities = 46/86 (53%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
 Frame = +3

Query: 3   PSSQGDLSVDSLATQNVESAVLPLDSLDGVKLAEEKDDILKKSRGYPNRLSYEIYLQHVC 182
           PS QGD +V+   T ++E+A+LPLD+LDGVKL +EK D  KKS G PN +SYEIYLQ + 
Sbjct: 332 PSGQGDQTVNGAGTDDLENAILPLDTLDGVKLPDEKPDTFKKS-GIPNSISYEIYLQQIF 390

Query: 183 HEHLYARAKNKPISAGT-WVSGQQKR 257
           H+H++ RA +KP+S+ T  +SGQ  +
Sbjct: 391 HDHVFVRATDKPVSSSTPHLSGQSAK 416



 Score = 58.5 bits (140), Expect(2) = 6e-28
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = +1

Query: 253 KDGSGLLGHFCMSLAHGIFSNKVCVELENVVSSV 354
           K+ SGLLGHFCMSLAH IFSNKV +ELENVVS V
Sbjct: 416 KEHSGLLGHFCMSLAHRIFSNKVLMELENVVSGV 449


>XP_008242750.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
           [Prunus mume]
          Length = 654

 Score = 93.6 bits (231), Expect(2) = 8e-28
 Identities = 42/80 (52%), Positives = 65/80 (81%)
 Frame = +3

Query: 9   SQGDLSVDSLATQNVESAVLPLDSLDGVKLAEEKDDILKKSRGYPNRLSYEIYLQHVCHE 188
           S+G+ +VDS +TQN+E+ +LPLD+LDG++LAE+K D +KK+   P+++S EIYLQ + H+
Sbjct: 330 SRGEQTVDSPSTQNLENTILPLDTLDGLELAEDKPDSVKKTSVIPDQISCEIYLQQIFHQ 389

Query: 189 HLYARAKNKPISAGTWVSGQ 248
           H++ +AK++P SAG  VSGQ
Sbjct: 390 HVFVKAKDRPTSAGARVSGQ 409



 Score = 59.3 bits (142), Expect(2) = 8e-28
 Identities = 30/45 (66%), Positives = 34/45 (75%)
 Frame = +1

Query: 253 KDGSGLLGHFCMSLAHGIFSNKVCVELENVVSSVASIVKGVPHIE 387
           K+G GLLGHFCMSLAH IFSNKV  ELENV       VKGVP+++
Sbjct: 412 KEGPGLLGHFCMSLAHRIFSNKVLKELENV-------VKGVPYLQ 449


>XP_007204608.1 hypothetical protein PRUPE_ppa002594mg [Prunus persica] ONH98285.1
           hypothetical protein PRUPE_7G240500 [Prunus persica]
          Length = 654

 Score = 93.6 bits (231), Expect(2) = 8e-28
 Identities = 42/80 (52%), Positives = 65/80 (81%)
 Frame = +3

Query: 9   SQGDLSVDSLATQNVESAVLPLDSLDGVKLAEEKDDILKKSRGYPNRLSYEIYLQHVCHE 188
           S+G+ +VDS +TQN+E+ +LPLD+LDG++LAE+K D +KK+   P+++S EIYLQ + H+
Sbjct: 330 SRGEQTVDSPSTQNLENTILPLDTLDGLELAEDKPDTVKKTSLIPDQISCEIYLQQIFHQ 389

Query: 189 HLYARAKNKPISAGTWVSGQ 248
           H++ +AK++P SAG  VSGQ
Sbjct: 390 HVFVKAKDRPTSAGARVSGQ 409



 Score = 59.3 bits (142), Expect(2) = 8e-28
 Identities = 30/45 (66%), Positives = 34/45 (75%)
 Frame = +1

Query: 253 KDGSGLLGHFCMSLAHGIFSNKVCVELENVVSSVASIVKGVPHIE 387
           K+G GLLGHFCMSLAH IFSNKV  ELENV       VKGVP+++
Sbjct: 412 KEGPGLLGHFCMSLAHRIFSNKVLKELENV-------VKGVPYLQ 449


>XP_015883833.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like isoform X1 [Ziziphus jujuba] XP_015883834.1
           PREDICTED: mediator of RNA polymerase II transcription
           subunit 17-like isoform X2 [Ziziphus jujuba]
          Length = 659

 Score = 94.0 bits (232), Expect(2) = 1e-27
 Identities = 46/86 (53%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
 Frame = +3

Query: 3   PSSQGDLSVDSLATQNVESAVLPLDSLDGVKLAEEKDDILKKSRGYPNRLSYEIYLQHVC 182
           PS QGD +V+   T ++E+A+LPLD+LDGVKL +EK D  KKS G PN +SYEIYLQ + 
Sbjct: 332 PSGQGDQTVNGAGTGDLENAILPLDTLDGVKLPDEKPDTFKKS-GIPNSISYEIYLQQIF 390

Query: 183 HEHLYARAKNKPISAGT-WVSGQQKR 257
           H+H++ RA +KP+S+ T  +SGQ  +
Sbjct: 391 HDHVFVRATDKPVSSSTPHLSGQSAK 416



 Score = 58.5 bits (140), Expect(2) = 1e-27
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = +1

Query: 253 KDGSGLLGHFCMSLAHGIFSNKVCVELENVVSSV 354
           K+ SGLLGHFCMSLAH IFSNKV +ELENVVS V
Sbjct: 416 KEHSGLLGHFCMSLAHRIFSNKVLMELENVVSGV 449


>XP_004300164.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
           [Fragaria vesca subsp. vesca]
          Length = 655

 Score = 87.0 bits (214), Expect(2) = 1e-26
 Identities = 42/82 (51%), Positives = 62/82 (75%)
 Frame = +3

Query: 3   PSSQGDLSVDSLATQNVESAVLPLDSLDGVKLAEEKDDILKKSRGYPNRLSYEIYLQHVC 182
           P++QG+ +VDS +TQN+E+A+LPLD+LDG+ L E+K D  KK    PN++S EIYL  + 
Sbjct: 330 PTNQGEETVDSPSTQNLENAILPLDTLDGLNLPEDKPDTPKKKSIIPNQISCEIYLLQIF 389

Query: 183 HEHLYARAKNKPISAGTWVSGQ 248
           H+H++ +AK++P S G  VSGQ
Sbjct: 390 HQHVFLKAKDRPTSGG-GVSGQ 410



 Score = 62.0 bits (149), Expect(2) = 1e-26
 Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
 Frame = +1

Query: 253 KDGSGLLGHFCMSLAHGIFSNKVCVELENVVSSVASIVKGVPHIEAYTTVP--HERSNEA 426
           K+GSGLLGHFCMSLAH IFSNKV +ELENV       V+GVP+++  T+ P  H R++  
Sbjct: 413 KEGSGLLGHFCMSLAHRIFSNKVLMELENV-------VRGVPYMQ-LTSHPTWHSRTSSW 464

Query: 427 TAKRRAP 447
           T   + P
Sbjct: 465 TLVVKIP 471


>XP_002285089.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
           [Vitis vinifera] CAN63500.1 hypothetical protein
           VITISV_011675 [Vitis vinifera] CBI28174.3 unnamed
           protein product, partial [Vitis vinifera]
          Length = 660

 Score = 89.7 bits (221), Expect(2) = 2e-26
 Identities = 41/76 (53%), Positives = 57/76 (75%)
 Frame = +3

Query: 3   PSSQGDLSVDSLATQNVESAVLPLDSLDGVKLAEEKDDILKKSRGYPNRLSYEIYLQHVC 182
           PS Q + + D +  QN+ESA+LP+D+ DGVKL++ K D  KK  G+PNR+S EIYL+ + 
Sbjct: 331 PSGQDEKTADGMGMQNLESAILPMDTFDGVKLSDGKHDNDKKKSGFPNRISSEIYLKQLF 390

Query: 183 HEHLYARAKNKPISAG 230
           HEH++ RAK+K ISAG
Sbjct: 391 HEHVFVRAKDKHISAG 406



 Score = 58.9 bits (141), Expect(2) = 2e-26
 Identities = 33/65 (50%), Positives = 43/65 (66%)
 Frame = +1

Query: 253 KDGSGLLGHFCMSLAHGIFSNKVCVELENVVSSVASIVKGVPHIEAYTTVPHERSNEATA 432
           KDG GLLGHFCMSLAH IFS+KV +ELEN+VS V  +     H+ ++ T  H R++  T 
Sbjct: 416 KDGFGLLGHFCMSLAHRIFSSKVLMELENLVSRVPYL-----HLLSHPTW-HSRTSSWTL 469

Query: 433 KRRAP 447
             + P
Sbjct: 470 LMKVP 474


>XP_016690182.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like isoform X1 [Gossypium hirsutum]
          Length = 671

 Score = 90.5 bits (223), Expect(2) = 6e-26
 Identities = 47/85 (55%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3   PSSQGD-LSVDSLATQNVESAVLPLDSLDGVKLAEEKDDI--LKKSRGYPNRLSYEIYLQ 173
           PSS+GD  +VD+  TQNV+SA++PLDS D VK  E K D   +KK  G+P+R+S EIYLQ
Sbjct: 340 PSSEGDNQAVDTANTQNVDSAIVPLDSFDEVKFGERKHDTPTMKKKWGFPHRISCEIYLQ 399

Query: 174 HVCHEHLYARAKNKPISAGTWVSGQ 248
            + HEH + +AK+KP  +GT VSGQ
Sbjct: 400 QIVHEHAFLKAKDKPNLSGTPVSGQ 424



 Score = 56.2 bits (134), Expect(2) = 6e-26
 Identities = 31/65 (47%), Positives = 40/65 (61%)
 Frame = +1

Query: 253 KDGSGLLGHFCMSLAHGIFSNKVCVELENVVSSVASIVKGVPHIEAYTTVPHERSNEATA 432
           KDG GLLGHFC+SLAH IFS++V +ELENVV  V  +     H+  + T  H R +  T 
Sbjct: 427 KDGPGLLGHFCLSLAHRIFSSRVLIELENVVCRVPYL-----HLMTHPTW-HSRKSSWTI 480

Query: 433 KRRAP 447
             + P
Sbjct: 481 FMKVP 485


>XP_016690183.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like isoform X2 [Gossypium hirsutum]
          Length = 581

 Score = 90.5 bits (223), Expect(2) = 6e-26
 Identities = 47/85 (55%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3   PSSQGD-LSVDSLATQNVESAVLPLDSLDGVKLAEEKDDI--LKKSRGYPNRLSYEIYLQ 173
           PSS+GD  +VD+  TQNV+SA++PLDS D VK  E K D   +KK  G+P+R+S EIYLQ
Sbjct: 250 PSSEGDNQAVDTANTQNVDSAIVPLDSFDEVKFGERKHDTPTMKKKWGFPHRISCEIYLQ 309

Query: 174 HVCHEHLYARAKNKPISAGTWVSGQ 248
            + HEH + +AK+KP  +GT VSGQ
Sbjct: 310 QIVHEHAFLKAKDKPNLSGTPVSGQ 334



 Score = 56.2 bits (134), Expect(2) = 6e-26
 Identities = 31/65 (47%), Positives = 40/65 (61%)
 Frame = +1

Query: 253 KDGSGLLGHFCMSLAHGIFSNKVCVELENVVSSVASIVKGVPHIEAYTTVPHERSNEATA 432
           KDG GLLGHFC+SLAH IFS++V +ELENVV  V  +     H+  + T  H R +  T 
Sbjct: 337 KDGPGLLGHFCLSLAHRIFSSRVLIELENVVCRVPYL-----HLMTHPTW-HSRKSSWTI 390

Query: 433 KRRAP 447
             + P
Sbjct: 391 FMKVP 395


>XP_016690184.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like isoform X3 [Gossypium hirsutum]
          Length = 560

 Score = 90.5 bits (223), Expect(2) = 6e-26
 Identities = 47/85 (55%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3   PSSQGD-LSVDSLATQNVESAVLPLDSLDGVKLAEEKDDI--LKKSRGYPNRLSYEIYLQ 173
           PSS+GD  +VD+  TQNV+SA++PLDS D VK  E K D   +KK  G+P+R+S EIYLQ
Sbjct: 229 PSSEGDNQAVDTANTQNVDSAIVPLDSFDEVKFGERKHDTPTMKKKWGFPHRISCEIYLQ 288

Query: 174 HVCHEHLYARAKNKPISAGTWVSGQ 248
            + HEH + +AK+KP  +GT VSGQ
Sbjct: 289 QIVHEHAFLKAKDKPNLSGTPVSGQ 313



 Score = 56.2 bits (134), Expect(2) = 6e-26
 Identities = 31/65 (47%), Positives = 40/65 (61%)
 Frame = +1

Query: 253 KDGSGLLGHFCMSLAHGIFSNKVCVELENVVSSVASIVKGVPHIEAYTTVPHERSNEATA 432
           KDG GLLGHFC+SLAH IFS++V +ELENVV  V  +     H+  + T  H R +  T 
Sbjct: 316 KDGPGLLGHFCLSLAHRIFSSRVLIELENVVCRVPYL-----HLMTHPTW-HSRKSSWTI 369

Query: 433 KRRAP 447
             + P
Sbjct: 370 FMKVP 374


>XP_016690185.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like isoform X4 [Gossypium hirsutum]
          Length = 543

 Score = 90.5 bits (223), Expect(2) = 6e-26
 Identities = 47/85 (55%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3   PSSQGD-LSVDSLATQNVESAVLPLDSLDGVKLAEEKDDI--LKKSRGYPNRLSYEIYLQ 173
           PSS+GD  +VD+  TQNV+SA++PLDS D VK  E K D   +KK  G+P+R+S EIYLQ
Sbjct: 212 PSSEGDNQAVDTANTQNVDSAIVPLDSFDEVKFGERKHDTPTMKKKWGFPHRISCEIYLQ 271

Query: 174 HVCHEHLYARAKNKPISAGTWVSGQ 248
            + HEH + +AK+KP  +GT VSGQ
Sbjct: 272 QIVHEHAFLKAKDKPNLSGTPVSGQ 296



 Score = 56.2 bits (134), Expect(2) = 6e-26
 Identities = 31/65 (47%), Positives = 40/65 (61%)
 Frame = +1

Query: 253 KDGSGLLGHFCMSLAHGIFSNKVCVELENVVSSVASIVKGVPHIEAYTTVPHERSNEATA 432
           KDG GLLGHFC+SLAH IFS++V +ELENVV  V  +     H+  + T  H R +  T 
Sbjct: 299 KDGPGLLGHFCLSLAHRIFSSRVLIELENVVCRVPYL-----HLMTHPTW-HSRKSSWTI 352

Query: 433 KRRAP 447
             + P
Sbjct: 353 FMKVP 357


>OAY47068.1 hypothetical protein MANES_06G049700 [Manihot esculenta]
          Length = 665

 Score = 89.0 bits (219), Expect(2) = 7e-26
 Identities = 45/82 (54%), Positives = 57/82 (69%)
 Frame = +3

Query: 3   PSSQGDLSVDSLATQNVESAVLPLDSLDGVKLAEEKDDILKKSRGYPNRLSYEIYLQHVC 182
           PS + D +VD    Q  ESAVLPLDSLDGVKL EEK + + K    PN +S EIYLQ + 
Sbjct: 337 PSYEYDQTVDDGGCQISESAVLPLDSLDGVKLPEEKHECVNKKSSIPNHMSCEIYLQQIF 396

Query: 183 HEHLYARAKNKPISAGTWVSGQ 248
           HEH++ RAK++ +S+GT V GQ
Sbjct: 397 HEHVFVRAKDRHLSSGTRVPGQ 418



 Score = 57.4 bits (137), Expect(2) = 7e-26
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = +1

Query: 253 KDGSGLLGHFCMSLAHGIFSNKVCVELENVVSSV 354
           KDGSGLLGHFCMS+AH IFSN+  +ELENVV  V
Sbjct: 422 KDGSGLLGHFCMSVAHRIFSNRALMELENVVCKV 455


>XP_006374395.1 hypothetical protein POPTR_0015s06780g [Populus trichocarpa]
           ERP52192.1 hypothetical protein POPTR_0015s06780g
           [Populus trichocarpa]
          Length = 667

 Score = 92.0 bits (227), Expect(2) = 1e-25
 Identities = 43/82 (52%), Positives = 59/82 (71%)
 Frame = +3

Query: 3   PSSQGDLSVDSLATQNVESAVLPLDSLDGVKLAEEKDDILKKSRGYPNRLSYEIYLQHVC 182
           PS QGD ++DS   +N+ESAV+PLDS DGVKLAEEK + L K   +PN ++YEIYL+ + 
Sbjct: 340 PSDQGDQAIDSEGPENLESAVVPLDSFDGVKLAEEKHNSLTKKPRFPNCITYEIYLKQIF 399

Query: 183 HEHLYARAKNKPISAGTWVSGQ 248
           HE+++  AK +P   GT + GQ
Sbjct: 400 HEYVFVEAKGRPSFTGTRMPGQ 421



 Score = 53.5 bits (127), Expect(2) = 1e-25
 Identities = 31/64 (48%), Positives = 40/64 (62%)
 Frame = +1

Query: 256 DGSGLLGHFCMSLAHGIFSNKVCVELENVVSSVASIVKGVPHIEAYTTVPHERSNEATAK 435
           DGSGLL HFC+SL+H I SNKV +ELENVV  V  +     H+ ++ T  H RS+  T  
Sbjct: 425 DGSGLLSHFCLSLSHRIISNKVLMELENVVCRVPYL-----HLISHPTW-HSRSSAWTIF 478

Query: 436 RRAP 447
            + P
Sbjct: 479 MKIP 482


>ABK92467.1 unknown [Populus trichocarpa]
          Length = 366

 Score = 92.0 bits (227), Expect(2) = 1e-25
 Identities = 43/82 (52%), Positives = 59/82 (71%)
 Frame = +3

Query: 3   PSSQGDLSVDSLATQNVESAVLPLDSLDGVKLAEEKDDILKKSRGYPNRLSYEIYLQHVC 182
           PS QGD ++DS   +N+ESAV+PLDS DGVKLAEEK + L K   +PN ++YEIYL+ + 
Sbjct: 39  PSDQGDQAIDSEGPENLESAVVPLDSFDGVKLAEEKHNSLTKKPRFPNCITYEIYLKQIF 98

Query: 183 HEHLYARAKNKPISAGTWVSGQ 248
           HE+++  AK +P   GT + GQ
Sbjct: 99  HEYVFVEAKGRPSFTGTRMPGQ 120



 Score = 53.5 bits (127), Expect(2) = 1e-25
 Identities = 31/64 (48%), Positives = 40/64 (62%)
 Frame = +1

Query: 256 DGSGLLGHFCMSLAHGIFSNKVCVELENVVSSVASIVKGVPHIEAYTTVPHERSNEATAK 435
           DGSGLL HFC+SL+H I SNKV +ELENVV  V  +     H+ ++ T  H RS+  T  
Sbjct: 124 DGSGLLSHFCLSLSHRIISNKVLMELENVVCRVPYL-----HLISHPTW-HSRSSAWTIF 177

Query: 436 RRAP 447
            + P
Sbjct: 178 MKIP 181


>XP_016744582.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like isoform X1 [Gossypium hirsutum]
          Length = 664

 Score = 85.9 bits (211), Expect(2) = 5e-25
 Identities = 44/82 (53%), Positives = 56/82 (68%)
 Frame = +3

Query: 3   PSSQGDLSVDSLATQNVESAVLPLDSLDGVKLAEEKDDILKKSRGYPNRLSYEIYLQHVC 182
           PSS+GD   D+  TQ+ ESA++PLDS D VK  E K    K+  G+PNR S EIYLQ + 
Sbjct: 337 PSSKGD-DQDAANTQDSESAIVPLDSFDNVKFEEGKHGTSKRKWGFPNRTSCEIYLQQIV 395

Query: 183 HEHLYARAKNKPISAGTWVSGQ 248
           HEH + +AK+KP  +GT VSGQ
Sbjct: 396 HEHAFVKAKDKPNLSGTRVSGQ 417



 Score = 57.8 bits (138), Expect(2) = 5e-25
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = +1

Query: 253 KDGSGLLGHFCMSLAHGIFSNKVCVELENVVSSV 354
           KDG GLLGHFC+SLAH IFSN+V VELENVV  V
Sbjct: 420 KDGPGLLGHFCLSLAHRIFSNRVLVELENVVCRV 453


>XP_016744583.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like isoform X2 [Gossypium hirsutum]
          Length = 631

 Score = 85.9 bits (211), Expect(2) = 5e-25
 Identities = 44/82 (53%), Positives = 56/82 (68%)
 Frame = +3

Query: 3   PSSQGDLSVDSLATQNVESAVLPLDSLDGVKLAEEKDDILKKSRGYPNRLSYEIYLQHVC 182
           PSS+GD   D+  TQ+ ESA++PLDS D VK  E K    K+  G+PNR S EIYLQ + 
Sbjct: 337 PSSKGD-DQDAANTQDSESAIVPLDSFDNVKFEEGKHGTSKRKWGFPNRTSCEIYLQQIV 395

Query: 183 HEHLYARAKNKPISAGTWVSGQ 248
           HEH + +AK+KP  +GT VSGQ
Sbjct: 396 HEHAFVKAKDKPNLSGTRVSGQ 417



 Score = 57.8 bits (138), Expect(2) = 5e-25
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = +1

Query: 253 KDGSGLLGHFCMSLAHGIFSNKVCVELENVVSSV 354
           KDG GLLGHFC+SLAH IFSN+V VELENVV  V
Sbjct: 420 KDGPGLLGHFCLSLAHRIFSNRVLVELENVVCRV 453


>XP_016728245.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like [Gossypium hirsutum]
          Length = 725

 Score = 85.5 bits (210), Expect(2) = 6e-25
 Identities = 44/82 (53%), Positives = 56/82 (68%)
 Frame = +3

Query: 3   PSSQGDLSVDSLATQNVESAVLPLDSLDGVKLAEEKDDILKKSRGYPNRLSYEIYLQHVC 182
           PSS+GD   D+  TQ+ ESA++PLDS D VK  E K    K+  G+PNR S EIYLQ + 
Sbjct: 398 PSSKGD-DQDAANTQDSESAIVPLDSFDNVKFEEGKHGTPKRKWGFPNRTSCEIYLQQIV 456

Query: 183 HEHLYARAKNKPISAGTWVSGQ 248
           HEH + +AK+KP  +GT VSGQ
Sbjct: 457 HEHAFVKAKDKPNLSGTRVSGQ 478



 Score = 57.8 bits (138), Expect(2) = 6e-25
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = +1

Query: 253 KDGSGLLGHFCMSLAHGIFSNKVCVELENVVSSV 354
           KDG GLLGHFC+SLAH IFSN+V VELENVV  V
Sbjct: 481 KDGPGLLGHFCLSLAHRIFSNRVLVELENVVCRV 514


>XP_017614271.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
           isoform X1 [Gossypium arboreum] KHG17744.1 mediator of
           rna polymerase ii transcription subunit 17 [Gossypium
           arboreum]
          Length = 664

 Score = 85.5 bits (210), Expect(2) = 6e-25
 Identities = 44/82 (53%), Positives = 56/82 (68%)
 Frame = +3

Query: 3   PSSQGDLSVDSLATQNVESAVLPLDSLDGVKLAEEKDDILKKSRGYPNRLSYEIYLQHVC 182
           PSS+GD   D+  TQ+ ESA++PLDS D VK  E K    K+  G+PNR S EIYLQ + 
Sbjct: 337 PSSKGD-DQDTANTQDSESAIVPLDSFDNVKFEEGKHGTPKRKWGFPNRTSCEIYLQQIV 395

Query: 183 HEHLYARAKNKPISAGTWVSGQ 248
           HEH + +AK+KP  +GT VSGQ
Sbjct: 396 HEHAFVKAKDKPNLSGTRVSGQ 417



 Score = 57.8 bits (138), Expect(2) = 6e-25
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = +1

Query: 253 KDGSGLLGHFCMSLAHGIFSNKVCVELENVVSSV 354
           KDG GLLGHFC+SLAH IFSN+V VELENVV  V
Sbjct: 420 KDGPGLLGHFCLSLAHRIFSNRVLVELENVVCRV 453