BLASTX nr result
ID: Phellodendron21_contig00032522
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00032522
(339 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006475818.1 PREDICTED: mediator of RNA polymerase II transcri... 73 5e-26
KDO80288.1 hypothetical protein CISIN_1g006207mg [Citrus sinensis] 73 5e-26
AIU49734.1 RNA polymerase II transcription mediator, partial [Ci... 73 5e-26
XP_006450970.1 hypothetical protein CICLE_v10007689mg [Citrus cl... 73 1e-25
AIU49730.1 RNA polymerase II transcription mediator, partial [Ci... 73 1e-25
GAV68327.1 Med17 domain-containing protein [Cephalotus follicula... 71 4e-25
XP_007013391.2 PREDICTED: mediator of RNA polymerase II transcri... 70 2e-24
EOY31009.1 RNA polymerase II transcription mediators isoform 1 [... 70 2e-24
XP_007013393.1 PREDICTED: mediator of RNA polymerase II transcri... 70 2e-24
EOY31011.1 RNA polymerase II transcription mediators isoform 3 [... 70 2e-24
AIU49727.1 RNA polymerase II transcription mediator, partial [Th... 70 2e-24
XP_018857876.1 PREDICTED: mediator of RNA polymerase II transcri... 70 5e-24
XP_010254371.1 PREDICTED: mediator of RNA polymerase II transcri... 71 7e-24
XP_004300164.1 PREDICTED: mediator of RNA polymerase II transcri... 70 9e-24
XP_002285089.1 PREDICTED: mediator of RNA polymerase II transcri... 70 6e-23
OMO61404.1 Mediator complex, subunit Med17 [Corchorus capsularis] 70 6e-23
AIU49763.1 RNA polymerase II transcription mediator, partial [Vi... 70 6e-23
AIU49767.1 RNA polymerase II transcription mediator, partial [Pl... 70 6e-23
AIU49732.1 RNA polymerase II transcription mediator, partial [Ca... 68 1e-22
XP_008242750.1 PREDICTED: mediator of RNA polymerase II transcri... 70 1e-22
>XP_006475818.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Citrus sinensis] KDO80287.1 hypothetical protein
CISIN_1g006207mg [Citrus sinensis]
Length = 657
Score = 72.8 bits (177), Expect(2) = 5e-26
Identities = 32/34 (94%), Positives = 32/34 (94%)
Frame = -3
Query: 103 LSFELDQGETADLVAHVDPEDMRGCISWWLVMED 2
LSFELDQGET LVAHVDPEDMRGCISWWLVMED
Sbjct: 577 LSFELDQGETVSLVAHVDPEDMRGCISWWLVMED 610
Score = 72.4 bits (176), Expect(2) = 5e-26
Identities = 42/76 (55%), Positives = 50/76 (65%)
Frame = -1
Query: 336 VVVNDDYINVEGEGTPNVVGLFKGRSEDVFYEQI*L*LGRSSCDHFTAEHRISCIIGVVL 157
VVVNDD I+VEGEGTPNVVGLFKGRSED+ + + CD A+ + + V
Sbjct: 502 VVVNDDCIHVEGEGTPNVVGLFKGRSEDMSS------MNKYDCD--LADLPVIILQQVAS 553
Query: 156 EFWPWLHEEALMVGIK 109
+ WLHEEALMVGIK
Sbjct: 554 QVIRWLHEEALMVGIK 569
>KDO80288.1 hypothetical protein CISIN_1g006207mg [Citrus sinensis]
Length = 546
Score = 72.8 bits (177), Expect(2) = 5e-26
Identities = 32/34 (94%), Positives = 32/34 (94%)
Frame = -3
Query: 103 LSFELDQGETADLVAHVDPEDMRGCISWWLVMED 2
LSFELDQGET LVAHVDPEDMRGCISWWLVMED
Sbjct: 466 LSFELDQGETVSLVAHVDPEDMRGCISWWLVMED 499
Score = 72.4 bits (176), Expect(2) = 5e-26
Identities = 42/76 (55%), Positives = 50/76 (65%)
Frame = -1
Query: 336 VVVNDDYINVEGEGTPNVVGLFKGRSEDVFYEQI*L*LGRSSCDHFTAEHRISCIIGVVL 157
VVVNDD I+VEGEGTPNVVGLFKGRSED+ + + CD A+ + + V
Sbjct: 391 VVVNDDCIHVEGEGTPNVVGLFKGRSEDMSS------MNKYDCD--LADLPVIILQQVAS 442
Query: 156 EFWPWLHEEALMVGIK 109
+ WLHEEALMVGIK
Sbjct: 443 QVIRWLHEEALMVGIK 458
>AIU49734.1 RNA polymerase II transcription mediator, partial [Citrus sinensis]
Length = 516
Score = 72.8 bits (177), Expect(2) = 5e-26
Identities = 32/34 (94%), Positives = 32/34 (94%)
Frame = -3
Query: 103 LSFELDQGETADLVAHVDPEDMRGCISWWLVMED 2
LSFELDQGET LVAHVDPEDMRGCISWWLVMED
Sbjct: 450 LSFELDQGETVSLVAHVDPEDMRGCISWWLVMED 483
Score = 72.4 bits (176), Expect(2) = 5e-26
Identities = 42/76 (55%), Positives = 50/76 (65%)
Frame = -1
Query: 336 VVVNDDYINVEGEGTPNVVGLFKGRSEDVFYEQI*L*LGRSSCDHFTAEHRISCIIGVVL 157
VVVNDD I+VEGEGTPNVVGLFKGRSED+ + + CD A+ + + V
Sbjct: 375 VVVNDDCIHVEGEGTPNVVGLFKGRSEDMSS------MNKYDCD--LADLPVIILQQVAS 426
Query: 156 EFWPWLHEEALMVGIK 109
+ WLHEEALMVGIK
Sbjct: 427 QVIRWLHEEALMVGIK 442
>XP_006450970.1 hypothetical protein CICLE_v10007689mg [Citrus clementina]
ESR64210.1 hypothetical protein CICLE_v10007689mg
[Citrus clementina]
Length = 657
Score = 72.8 bits (177), Expect(2) = 1e-25
Identities = 32/34 (94%), Positives = 32/34 (94%)
Frame = -3
Query: 103 LSFELDQGETADLVAHVDPEDMRGCISWWLVMED 2
LSFELDQGET LVAHVDPEDMRGCISWWLVMED
Sbjct: 577 LSFELDQGETVSLVAHVDPEDMRGCISWWLVMED 610
Score = 70.9 bits (172), Expect(2) = 1e-25
Identities = 41/76 (53%), Positives = 50/76 (65%)
Frame = -1
Query: 336 VVVNDDYINVEGEGTPNVVGLFKGRSEDVFYEQI*L*LGRSSCDHFTAEHRISCIIGVVL 157
VVVNDD I+VEGEGTPNVVGLF+GRSED+ + + CD A+ + + V
Sbjct: 502 VVVNDDCIHVEGEGTPNVVGLFEGRSEDMSS------MNKYDCD--LADLPVIILQQVAS 553
Query: 156 EFWPWLHEEALMVGIK 109
+ WLHEEALMVGIK
Sbjct: 554 QVIRWLHEEALMVGIK 569
>AIU49730.1 RNA polymerase II transcription mediator, partial [Citrus
clementina]
Length = 516
Score = 72.8 bits (177), Expect(2) = 1e-25
Identities = 32/34 (94%), Positives = 32/34 (94%)
Frame = -3
Query: 103 LSFELDQGETADLVAHVDPEDMRGCISWWLVMED 2
LSFELDQGET LVAHVDPEDMRGCISWWLVMED
Sbjct: 450 LSFELDQGETVSLVAHVDPEDMRGCISWWLVMED 483
Score = 70.9 bits (172), Expect(2) = 1e-25
Identities = 41/76 (53%), Positives = 50/76 (65%)
Frame = -1
Query: 336 VVVNDDYINVEGEGTPNVVGLFKGRSEDVFYEQI*L*LGRSSCDHFTAEHRISCIIGVVL 157
VVVNDD I+VEGEGTPNVVGLF+GRSED+ + + CD A+ + + V
Sbjct: 375 VVVNDDCIHVEGEGTPNVVGLFEGRSEDMSS------MNKYDCD--LADLPVIILQQVAS 426
Query: 156 EFWPWLHEEALMVGIK 109
+ WLHEEALMVGIK
Sbjct: 427 QVIRWLHEEALMVGIK 442
>GAV68327.1 Med17 domain-containing protein [Cephalotus follicularis]
Length = 677
Score = 71.2 bits (173), Expect(2) = 4e-25
Identities = 40/77 (51%), Positives = 49/77 (63%)
Frame = -1
Query: 339 KVVVNDDYINVEGEGTPNVVGLFKGRSEDVFYEQI*L*LGRSSCDHFTAEHRISCIIGVV 160
KVVVNDD INVEGEG PNVVGL KG SED++ + + CD A+ + + V
Sbjct: 520 KVVVNDDCINVEGEGAPNVVGLLKGTSEDIYS------VNKYDCD--LADLPVIILQQVA 571
Query: 159 LEFWPWLHEEALMVGIK 109
+ WLHEEALMVG+K
Sbjct: 572 SQVIRWLHEEALMVGLK 588
Score = 70.9 bits (172), Expect(2) = 4e-25
Identities = 29/35 (82%), Positives = 33/35 (94%)
Frame = -3
Query: 106 CLSFELDQGETADLVAHVDPEDMRGCISWWLVMED 2
CLSFE+DQGET LVAHVDPED++GCISWWLVM+D
Sbjct: 595 CLSFEMDQGETLSLVAHVDPEDIQGCISWWLVMDD 629
>XP_007013391.2 PREDICTED: mediator of RNA polymerase II transcription subunit 17
isoform X1 [Theobroma cacao]
Length = 667
Score = 70.5 bits (171), Expect(2) = 2e-24
Identities = 29/35 (82%), Positives = 33/35 (94%)
Frame = -3
Query: 106 CLSFELDQGETADLVAHVDPEDMRGCISWWLVMED 2
CL+FEL+QGET LVAHVDPED++GCISWWLVMED
Sbjct: 585 CLTFELEQGETVSLVAHVDPEDIQGCISWWLVMED 619
Score = 69.3 bits (168), Expect(2) = 2e-24
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = -1
Query: 339 KVVVNDDYINVEGEGTPNVVGLFKGRSEDVFYEQI*L*LGRSSCDHFTAEHRISCIIGVV 160
KVVVNDD INVEGEG PNVVGLFK SED+ + + CD A+ + + V
Sbjct: 510 KVVVNDDRINVEGEGAPNVVGLFKRSSEDICS------VNKYDCD--LADLPVIILQQVA 561
Query: 159 LEFWPWLHEEALMVGIK 109
+ WLHEEALMVGIK
Sbjct: 562 SQVIRWLHEEALMVGIK 578
>EOY31009.1 RNA polymerase II transcription mediators isoform 1 [Theobroma
cacao] EOY31010.1 RNA polymerase II transcription
mediators isoform 1 [Theobroma cacao]
Length = 663
Score = 70.5 bits (171), Expect(2) = 2e-24
Identities = 29/35 (82%), Positives = 33/35 (94%)
Frame = -3
Query: 106 CLSFELDQGETADLVAHVDPEDMRGCISWWLVMED 2
CL+FEL+QGET LVAHVDPED++GCISWWLVMED
Sbjct: 581 CLTFELEQGETVSLVAHVDPEDIQGCISWWLVMED 615
Score = 69.3 bits (168), Expect(2) = 2e-24
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = -1
Query: 339 KVVVNDDYINVEGEGTPNVVGLFKGRSEDVFYEQI*L*LGRSSCDHFTAEHRISCIIGVV 160
KVVVNDD INVEGEG PNVVGLFK SED+ + + CD A+ + + V
Sbjct: 506 KVVVNDDRINVEGEGAPNVVGLFKRSSEDICS------VNKYDCD--LADLPVIILQQVA 557
Query: 159 LEFWPWLHEEALMVGIK 109
+ WLHEEALMVGIK
Sbjct: 558 SQVIRWLHEEALMVGIK 574
>XP_007013393.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
isoform X2 [Theobroma cacao] EOY31012.1 RNA polymerase
II transcription mediators isoform 4 [Theobroma cacao]
Length = 556
Score = 70.5 bits (171), Expect(2) = 2e-24
Identities = 29/35 (82%), Positives = 33/35 (94%)
Frame = -3
Query: 106 CLSFELDQGETADLVAHVDPEDMRGCISWWLVMED 2
CL+FEL+QGET LVAHVDPED++GCISWWLVMED
Sbjct: 474 CLTFELEQGETVSLVAHVDPEDIQGCISWWLVMED 508
Score = 69.3 bits (168), Expect(2) = 2e-24
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = -1
Query: 339 KVVVNDDYINVEGEGTPNVVGLFKGRSEDVFYEQI*L*LGRSSCDHFTAEHRISCIIGVV 160
KVVVNDD INVEGEG PNVVGLFK SED+ + + CD A+ + + V
Sbjct: 399 KVVVNDDRINVEGEGAPNVVGLFKRSSEDICS------VNKYDCD--LADLPVIILQQVA 450
Query: 159 LEFWPWLHEEALMVGIK 109
+ WLHEEALMVGIK
Sbjct: 451 SQVIRWLHEEALMVGIK 467
>EOY31011.1 RNA polymerase II transcription mediators isoform 3 [Theobroma
cacao] EOY31013.1 RNA polymerase II transcription
mediators isoform 3 [Theobroma cacao]
Length = 527
Score = 70.5 bits (171), Expect(2) = 2e-24
Identities = 29/35 (82%), Positives = 33/35 (94%)
Frame = -3
Query: 106 CLSFELDQGETADLVAHVDPEDMRGCISWWLVMED 2
CL+FEL+QGET LVAHVDPED++GCISWWLVMED
Sbjct: 445 CLTFELEQGETVSLVAHVDPEDIQGCISWWLVMED 479
Score = 69.3 bits (168), Expect(2) = 2e-24
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = -1
Query: 339 KVVVNDDYINVEGEGTPNVVGLFKGRSEDVFYEQI*L*LGRSSCDHFTAEHRISCIIGVV 160
KVVVNDD INVEGEG PNVVGLFK SED+ + + CD A+ + + V
Sbjct: 370 KVVVNDDRINVEGEGAPNVVGLFKRSSEDICS------VNKYDCD--LADLPVIILQQVA 421
Query: 159 LEFWPWLHEEALMVGIK 109
+ WLHEEALMVGIK
Sbjct: 422 SQVIRWLHEEALMVGIK 438
>AIU49727.1 RNA polymerase II transcription mediator, partial [Theobroma cacao]
Length = 517
Score = 70.5 bits (171), Expect(2) = 2e-24
Identities = 29/35 (82%), Positives = 33/35 (94%)
Frame = -3
Query: 106 CLSFELDQGETADLVAHVDPEDMRGCISWWLVMED 2
CL+FEL+QGET LVAHVDPED++GCISWWLVMED
Sbjct: 450 CLTFELEQGETVSLVAHVDPEDIQGCISWWLVMED 484
Score = 69.3 bits (168), Expect(2) = 2e-24
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = -1
Query: 339 KVVVNDDYINVEGEGTPNVVGLFKGRSEDVFYEQI*L*LGRSSCDHFTAEHRISCIIGVV 160
KVVVNDD INVEGEG PNVVGLFK SED+ + + CD A+ + + V
Sbjct: 375 KVVVNDDRINVEGEGAPNVVGLFKRSSEDICS------VNKYDCD--LADLPVIILQQVA 426
Query: 159 LEFWPWLHEEALMVGIK 109
+ WLHEEALMVGIK
Sbjct: 427 SQVIRWLHEEALMVGIK 443
>XP_018857876.1 PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Juglans regia]
Length = 660
Score = 70.1 bits (170), Expect(2) = 5e-24
Identities = 39/77 (50%), Positives = 49/77 (63%)
Frame = -1
Query: 339 KVVVNDDYINVEGEGTPNVVGLFKGRSEDVFYEQI*L*LGRSSCDHFTAEHRISCIIGVV 160
KVVVNDD IN+EGEG PNV+GLFKG SE++ + R CD A+ ++ + V
Sbjct: 503 KVVVNDDCINIEGEGAPNVLGLFKGNSEEISS------MNRYDCD--LADLPVTILQQVA 554
Query: 159 LEFWPWLHEEALMVGIK 109
+ WLHEEAL VGIK
Sbjct: 555 SQVIGWLHEEALSVGIK 571
Score = 68.2 bits (165), Expect(2) = 5e-24
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = -3
Query: 106 CLSFELDQGETADLVAHVDPEDMRGCISWWLVMED 2
CLSFEL+QGE LVAHVDPED +GCISWWLVMED
Sbjct: 578 CLSFELEQGEIVSLVAHVDPEDNQGCISWWLVMED 612
>XP_010254371.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Nelumbo nucifera]
Length = 667
Score = 71.2 bits (173), Expect(2) = 7e-24
Identities = 30/35 (85%), Positives = 33/35 (94%)
Frame = -3
Query: 106 CLSFELDQGETADLVAHVDPEDMRGCISWWLVMED 2
CLSFELDQGET LVAHVDPED++GCISWWLVM+D
Sbjct: 582 CLSFELDQGETLGLVAHVDPEDIQGCISWWLVMDD 616
Score = 66.6 bits (161), Expect(2) = 7e-24
Identities = 37/77 (48%), Positives = 47/77 (61%)
Frame = -1
Query: 339 KVVVNDDYINVEGEGTPNVVGLFKGRSEDVFYEQI*L*LGRSSCDHFTAEHRISCIIGVV 160
KVVVNDD IN+EGEG PNVVGLFKG +ED+ +S D + + + V
Sbjct: 507 KVVVNDDCINIEGEGAPNVVGLFKGSAEDI--------CSMNSYDCNLPDLPVILLQQVA 558
Query: 159 LEFWPWLHEEALMVGIK 109
+ WLHEEAL+VG+K
Sbjct: 559 SQVVRWLHEEALLVGMK 575
>XP_004300164.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Fragaria vesca subsp. vesca]
Length = 655
Score = 70.1 bits (170), Expect(2) = 9e-24
Identities = 30/35 (85%), Positives = 31/35 (88%)
Frame = -3
Query: 106 CLSFELDQGETADLVAHVDPEDMRGCISWWLVMED 2
CLSFEL+QGET LVAHVDPED GCISWWLVMED
Sbjct: 574 CLSFELEQGETLSLVAHVDPEDTEGCISWWLVMED 608
Score = 67.4 bits (163), Expect(2) = 9e-24
Identities = 38/77 (49%), Positives = 48/77 (62%)
Frame = -1
Query: 339 KVVVNDDYINVEGEGTPNVVGLFKGRSEDVFYEQI*L*LGRSSCDHFTAEHRISCIIGVV 160
KVVV DD IN++GEG PNVVGLFKG S++V + R CD A+ + + V
Sbjct: 499 KVVVTDDCINIDGEGAPNVVGLFKGTSQEVCS------MNRYDCD--LADLSVIILQQVA 550
Query: 159 LEFWPWLHEEALMVGIK 109
+ WLHEEALMVG+K
Sbjct: 551 SQVIRWLHEEALMVGLK 567
>XP_002285089.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Vitis vinifera] CAN63500.1 hypothetical protein
VITISV_011675 [Vitis vinifera] CBI28174.3 unnamed
protein product, partial [Vitis vinifera]
Length = 660
Score = 70.5 bits (171), Expect(2) = 6e-23
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = -1
Query: 339 KVVVNDDYINVEGEGTPNVVGLFKGRSEDVFYEQI*L*LGRSSCDHFTAEHRISCIIGVV 160
KVV+NDD INVEG+G PNVVGLFKG SEDV + R CD A+ + + V
Sbjct: 503 KVVINDDCINVEGDGAPNVVGLFKGSSEDVCS------MNRYDCD--LADIPVILLQQVA 554
Query: 159 LEFWPWLHEEALMVGIK 109
+ WLHEEAL VGIK
Sbjct: 555 SQVIRWLHEEALKVGIK 571
Score = 64.3 bits (155), Expect(2) = 6e-23
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = -3
Query: 106 CLSFELDQGETADLVAHVDPEDMRGCISWWLVMED 2
CLSFE+DQGE LVAHV+P+D +GCISWWLVM+D
Sbjct: 578 CLSFEMDQGEMLSLVAHVNPDDPQGCISWWLVMDD 612
>OMO61404.1 Mediator complex, subunit Med17 [Corchorus capsularis]
Length = 667
Score = 70.5 bits (171), Expect(2) = 6e-23
Identities = 29/35 (82%), Positives = 33/35 (94%)
Frame = -3
Query: 106 CLSFELDQGETADLVAHVDPEDMRGCISWWLVMED 2
CL+FEL+QGET LVAHVDPED++GCISWWLVMED
Sbjct: 585 CLTFELEQGETVSLVAHVDPEDVQGCISWWLVMED 619
Score = 64.3 bits (155), Expect(2) = 6e-23
Identities = 39/77 (50%), Positives = 46/77 (59%)
Frame = -1
Query: 339 KVVVNDDYINVEGEGTPNVVGLFKGRSEDVFYEQI*L*LGRSSCDHFTAEHRISCIIGVV 160
KVVV+DD INVEGEG PNVVGLFK SED+ + + CD A+ I +
Sbjct: 510 KVVVHDDRINVEGEGAPNVVGLFKRSSEDICS------INKYDCD--LADLPIIILQQAA 561
Query: 159 LEFWPWLHEEALMVGIK 109
+ WLHEEAL VGIK
Sbjct: 562 SQVIRWLHEEALTVGIK 578
>AIU49763.1 RNA polymerase II transcription mediator, partial [Vitis vinifera]
Length = 516
Score = 70.5 bits (171), Expect(2) = 6e-23
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = -1
Query: 339 KVVVNDDYINVEGEGTPNVVGLFKGRSEDVFYEQI*L*LGRSSCDHFTAEHRISCIIGVV 160
KVV+NDD INVEG+G PNVVGLFKG SEDV + R CD A+ + + V
Sbjct: 374 KVVINDDCINVEGDGAPNVVGLFKGSSEDVCS------MNRYDCD--LADIPVILLQQVA 425
Query: 159 LEFWPWLHEEALMVGIK 109
+ WLHEEAL VGIK
Sbjct: 426 SQVIRWLHEEALKVGIK 442
Score = 64.3 bits (155), Expect(2) = 6e-23
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = -3
Query: 106 CLSFELDQGETADLVAHVDPEDMRGCISWWLVMED 2
CLSFE+DQGE LVAHV+P+D +GCISWWLVM+D
Sbjct: 449 CLSFEMDQGEMLSLVAHVNPDDPQGCISWWLVMDD 483
>AIU49767.1 RNA polymerase II transcription mediator, partial [Platanus x
hispanica]
Length = 517
Score = 70.1 bits (170), Expect(2) = 6e-23
Identities = 30/35 (85%), Positives = 31/35 (88%)
Frame = -3
Query: 106 CLSFELDQGETADLVAHVDPEDMRGCISWWLVMED 2
CLSFELDQG+T LVAHVDPED GCISWWLVMED
Sbjct: 450 CLSFELDQGDTLGLVAHVDPEDTHGCISWWLVMED 484
Score = 64.7 bits (156), Expect(2) = 6e-23
Identities = 38/77 (49%), Positives = 46/77 (59%)
Frame = -1
Query: 339 KVVVNDDYINVEGEGTPNVVGLFKGRSEDVFYEQI*L*LGRSSCDHFTAEHRISCIIGVV 160
KVVVNDD I+VEGEG PNVVGLFKG SED+ +S + + + V
Sbjct: 375 KVVVNDDRISVEGEGAPNVVGLFKGSSEDI--------CSMNSYGCNLPDLPVILLQQVA 426
Query: 159 LEFWPWLHEEALMVGIK 109
+ WLHEEALM+GIK
Sbjct: 427 SQVVRWLHEEALMLGIK 443
>AIU49732.1 RNA polymerase II transcription mediator, partial [Carica papaya]
Length = 376
Score = 68.2 bits (165), Expect(2) = 1e-22
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = -3
Query: 103 LSFELDQGETADLVAHVDPEDMRGCISWWLVMED 2
LSFEL+QGET LVAHVDPED++GCISWWLVMED
Sbjct: 314 LSFELEQGETVSLVAHVDPEDVQGCISWWLVMED 347
Score = 65.9 bits (159), Expect(2) = 1e-22
Identities = 39/80 (48%), Positives = 48/80 (60%)
Frame = -1
Query: 339 KVVVNDDYINVEGEGTPNVVGLFKGRSEDVFYEQI*L*LGRSSCDHFTAEHRISCIIGVV 160
KVVVNDD INVEGE PN+V LFKG S+D+ + + CD A+ + + V
Sbjct: 238 KVVVNDDSINVEGECAPNIVRLFKGNSDDLCS------VNKYDCD--LADLPVMILQQVA 289
Query: 159 LEFWPWLHEEALMVGIKDVC 100
+ WLHEEALMVGIK C
Sbjct: 290 SQVIRWLHEEALMVGIKANC 309
>XP_008242750.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Prunus mume]
Length = 654
Score = 70.5 bits (171), Expect(2) = 1e-22
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = -1
Query: 339 KVVVNDDYINVEGEGTPNVVGLFKGRSEDVFYEQI*L*LGRSSCDHFTAEHRISCIIGVV 160
KVVV DD INVEGEG PNVVGLFKG SE++ + R CD A+ + + V
Sbjct: 498 KVVVTDDCINVEGEGAPNVVGLFKGNSEEICS------MNRYDCD--LADLPVIILQQVA 549
Query: 159 LEFWPWLHEEALMVGIK 109
+ WLHEEALMVGIK
Sbjct: 550 SQVIRWLHEEALMVGIK 566
Score = 63.2 bits (152), Expect(2) = 1e-22
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = -3
Query: 106 CLSFELDQGETADLVAHVDPEDMRGCISWWLVME 5
CLSFELD GET LVAHVDPED GCISWWLV++
Sbjct: 573 CLSFELDLGETLSLVAHVDPEDGEGCISWWLVID 606