BLASTX nr result
ID: Phellodendron21_contig00031244
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00031244
(596 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006479590.1 PREDICTED: DNA-directed RNA polymerase III subuni... 105 3e-25
KDO68535.1 hypothetical protein CISIN_1g029495mg [Citrus sinensi... 105 3e-25
XP_006443913.1 hypothetical protein CICLE_v10023915mg, partial [... 105 5e-25
XP_006479592.1 PREDICTED: DNA-directed RNA polymerase III subuni... 105 6e-25
XP_010087136.1 DNA-directed RNA polymerase III subunit rpc8 [Mor... 83 5e-18
GAV80466.1 SHS2_Rpb7-N domain-containing protein/RNA_pol_Rbc25 d... 77 8e-18
XP_017977596.1 PREDICTED: DNA-directed RNA polymerase III subuni... 69 9e-17
EOX94571.1 RNA polymerase Rpb7 N-terminal domain-containing prot... 69 9e-17
XP_006396961.1 hypothetical protein EUTSA_v10028967mg [Eutrema s... 76 1e-16
CDY15589.1 BnaA08g28730D [Brassica napus] 76 4e-16
XP_013657524.1 PREDICTED: DNA-directed RNA polymerase III subuni... 76 4e-16
XP_009110973.1 PREDICTED: DNA-directed RNA polymerase III subuni... 76 4e-16
CDX86513.1 BnaC08g01900D [Brassica napus] 76 5e-16
XP_013602966.1 PREDICTED: DNA-directed RNA polymerase III subuni... 76 5e-16
XP_018449375.1 PREDICTED: DNA-directed RNA polymerase III subuni... 76 9e-16
XP_010475430.1 PREDICTED: DNA-directed RNA polymerase III subuni... 74 1e-15
XP_015080913.1 PREDICTED: DNA-directed RNA polymerase III subuni... 77 1e-15
XP_010323226.1 PREDICTED: DNA-directed RNA polymerase III subuni... 77 1e-15
XP_015080916.1 PREDICTED: DNA-directed RNA polymerase III subuni... 77 1e-15
XP_004242644.1 PREDICTED: DNA-directed RNA polymerase III subuni... 77 1e-15
>XP_006479590.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X1
[Citrus sinensis] XP_006479591.1 PREDICTED: DNA-directed
RNA polymerase III subunit RPC8 isoform X1 [Citrus
sinensis] KDO68533.1 hypothetical protein
CISIN_1g029495mg [Citrus sinensis] KDO68534.1
hypothetical protein CISIN_1g029495mg [Citrus sinensis]
Length = 192
Score = 105 bits (261), Expect(2) = 3e-25
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = -3
Query: 594 LTLGFFEDIYIPSHLLPSPSRSEPDPYRRYEVRWIWEFGDTKYLIDGLDE 445
L+LGFFEDIY+PSHLLPSPSRSEPDPY RYEV+WIWEFGDTKY+IDGLDE
Sbjct: 99 LSLGFFEDIYVPSHLLPSPSRSEPDPYGRYEVKWIWEFGDTKYVIDGLDE 148
Score = 37.7 bits (86), Expect(2) = 3e-25
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -1
Query: 401 GSIDYDGLGPVSWW 360
GSIDYDGLGPVSWW
Sbjct: 179 GSIDYDGLGPVSWW 192
>KDO68535.1 hypothetical protein CISIN_1g029495mg [Citrus sinensis] KDO68536.1
hypothetical protein CISIN_1g029495mg [Citrus sinensis]
Length = 177
Score = 105 bits (261), Expect(2) = 3e-25
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = -3
Query: 594 LTLGFFEDIYIPSHLLPSPSRSEPDPYRRYEVRWIWEFGDTKYLIDGLDE 445
L+LGFFEDIY+PSHLLPSPSRSEPDPY RYEV+WIWEFGDTKY+IDGLDE
Sbjct: 84 LSLGFFEDIYVPSHLLPSPSRSEPDPYGRYEVKWIWEFGDTKYVIDGLDE 133
Score = 37.7 bits (86), Expect(2) = 3e-25
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -1
Query: 401 GSIDYDGLGPVSWW 360
GSIDYDGLGPVSWW
Sbjct: 164 GSIDYDGLGPVSWW 177
>XP_006443913.1 hypothetical protein CICLE_v10023915mg, partial [Citrus clementina]
ESR57153.1 hypothetical protein CICLE_v10023915mg,
partial [Citrus clementina]
Length = 178
Score = 105 bits (261), Expect = 5e-25
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = -3
Query: 594 LTLGFFEDIYIPSHLLPSPSRSEPDPYRRYEVRWIWEFGDTKYLIDGLDE 445
L+LGFFEDIY+PSHLLPSPSRSEPDPY RYEV+WIWEFGDTKY+IDGLDE
Sbjct: 99 LSLGFFEDIYVPSHLLPSPSRSEPDPYGRYEVKWIWEFGDTKYVIDGLDE 148
>XP_006479592.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X2
[Citrus sinensis]
Length = 187
Score = 105 bits (261), Expect = 6e-25
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = -3
Query: 594 LTLGFFEDIYIPSHLLPSPSRSEPDPYRRYEVRWIWEFGDTKYLIDGLDE 445
L+LGFFEDIY+PSHLLPSPSRSEPDPY RYEV+WIWEFGDTKY+IDGLDE
Sbjct: 99 LSLGFFEDIYVPSHLLPSPSRSEPDPYGRYEVKWIWEFGDTKYVIDGLDE 148
>XP_010087136.1 DNA-directed RNA polymerase III subunit rpc8 [Morus notabilis]
EXB26576.1 DNA-directed RNA polymerase III subunit rpc8
[Morus notabilis]
Length = 200
Score = 82.8 bits (203), Expect(2) = 5e-18
Identities = 36/50 (72%), Positives = 41/50 (82%)
Frame = -3
Query: 594 LTLGFFEDIYIPSHLLPSPSRSEPDPYRRYEVRWIWEFGDTKYLIDGLDE 445
LTLGFFEDIYIP++ LP PSR EPDP +R V WIWEFG+ KY+IDG DE
Sbjct: 99 LTLGFFEDIYIPANFLPDPSRPEPDPRKRDRVTWIWEFGEQKYVIDGEDE 148
Score = 35.8 bits (81), Expect(2) = 5e-18
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 401 GSIDYDGLGPVSWWQDAEK 345
GS+D DGLGPVSWW A++
Sbjct: 179 GSLDCDGLGPVSWWDGADE 197
>GAV80466.1 SHS2_Rpb7-N domain-containing protein/RNA_pol_Rbc25
domain-containing protein [Cephalotus follicularis]
Length = 204
Score = 77.0 bits (188), Expect(2) = 8e-18
Identities = 33/50 (66%), Positives = 43/50 (86%)
Frame = -3
Query: 594 LTLGFFEDIYIPSHLLPSPSRSEPDPYRRYEVRWIWEFGDTKYLIDGLDE 445
L+LGFF+DI++P HLLPSPSR EP P RY+VRWIWE+GD +++IDG D+
Sbjct: 99 LSLGFFDDIHVPVHLLPSPSRFEPSPDTRYKVRWIWEYGD-EFIIDGRDK 147
Score = 40.8 bits (94), Expect(2) = 8e-18
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = -1
Query: 401 GSIDYDGLGPVSWWQDAEKVSQQLD 327
G+IDYDGLGPVSWW+++++ + D
Sbjct: 177 GTIDYDGLGPVSWWEESQEKDAEQD 201
>XP_017977596.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X1
[Theobroma cacao]
Length = 229
Score = 68.9 bits (167), Expect(2) = 9e-17
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 8/58 (13%)
Frame = -3
Query: 594 LTLGFFEDIYIPSHLLPSPSRSEPDPYRRYEVRWIWEFGDT--------KYLIDGLDE 445
L+LGFF+DIYIP HLLP PSR E DP R + RWIW+FG+ +++IDG+D+
Sbjct: 118 LSLGFFDDIYIPVHLLPIPSRFESDPNNRNQGRWIWDFGEAEEAQSEEPRFVIDGMDQ 175
Score = 45.4 bits (106), Expect(2) = 9e-17
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = -1
Query: 401 GSIDYDGLGPVSWWQDAEKVSQQ 333
GSIDYDGLGPVSWW++AE V ++
Sbjct: 206 GSIDYDGLGPVSWWEEAEMVQEE 228
>EOX94571.1 RNA polymerase Rpb7 N-terminal domain-containing protein [Theobroma
cacao]
Length = 210
Score = 68.9 bits (167), Expect(2) = 9e-17
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 8/58 (13%)
Frame = -3
Query: 594 LTLGFFEDIYIPSHLLPSPSRSEPDPYRRYEVRWIWEFGDT--------KYLIDGLDE 445
L+LGFF+DIYIP HLLP PSR E DP R + RWIW+FG+ +++IDG+D+
Sbjct: 99 LSLGFFDDIYIPVHLLPIPSRFESDPNNRNQGRWIWDFGEAEEAQSEEPRFVIDGMDQ 156
Score = 45.4 bits (106), Expect(2) = 9e-17
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = -1
Query: 401 GSIDYDGLGPVSWWQDAEKVSQQ 333
GSIDYDGLGPVSWW++AE V ++
Sbjct: 187 GSIDYDGLGPVSWWEEAEMVQEE 209
>XP_006396961.1 hypothetical protein EUTSA_v10028967mg [Eutrema salsugineum]
ESQ38414.1 hypothetical protein EUTSA_v10028967mg
[Eutrema salsugineum]
Length = 204
Score = 75.9 bits (185), Expect(2) = 1e-16
Identities = 31/48 (64%), Positives = 41/48 (85%), Gaps = 2/48 (4%)
Frame = -3
Query: 594 LTLGFFEDIYIPSHLLPSPSRSEPDPYRRYEVRWIWEFGDTK--YLID 457
LTLGFFEDIY+P+ L+P+P+R EPDPY R ++RW+WEFG+ K Y+ID
Sbjct: 99 LTLGFFEDIYVPAPLIPTPNRCEPDPYNRNQMRWVWEFGEPKEDYIID 146
Score = 37.7 bits (86), Expect(2) = 1e-16
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = -1
Query: 401 GSIDYDGLGPVSWWQDAEKVSQQ 333
G+ID DGLGPVSWW+ +++ Q+
Sbjct: 181 GNIDDDGLGPVSWWESFDQIDQE 203
>CDY15589.1 BnaA08g28730D [Brassica napus]
Length = 203
Score = 76.3 bits (186), Expect(2) = 4e-16
Identities = 27/46 (58%), Positives = 41/46 (89%)
Frame = -3
Query: 594 LTLGFFEDIYIPSHLLPSPSRSEPDPYRRYEVRWIWEFGDTKYLID 457
LTLGFFED+Y+P+ L+P+P+R EPDPY R ++RW+W++GD +++ID
Sbjct: 98 LTLGFFEDVYVPAPLIPTPNRCEPDPYNRNQMRWVWKYGDDEFIID 143
Score = 35.8 bits (81), Expect(2) = 4e-16
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -1
Query: 401 GSIDYDGLGPVSWWQDAEKVSQQLD 327
G+ID DGLGPVSWW+ +S D
Sbjct: 179 GTIDDDGLGPVSWWEACAPISDDED 203
>XP_013657524.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Brassica napus]
Length = 202
Score = 76.3 bits (186), Expect(2) = 4e-16
Identities = 27/46 (58%), Positives = 41/46 (89%)
Frame = -3
Query: 594 LTLGFFEDIYIPSHLLPSPSRSEPDPYRRYEVRWIWEFGDTKYLID 457
LTLGFFED+Y+P+ L+P+P+R EPDPY R ++RW+W++GD +++ID
Sbjct: 98 LTLGFFEDVYVPAPLIPTPNRCEPDPYNRNQMRWVWKYGDDEFIID 143
Score = 35.8 bits (81), Expect(2) = 4e-16
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -1
Query: 401 GSIDYDGLGPVSWWQDAEKVSQQLD 327
G+ID DGLGPVSWW+ +S D
Sbjct: 178 GTIDDDGLGPVSWWEACAPISDDED 202
>XP_009110973.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
isoform X1 [Brassica rapa]
Length = 202
Score = 76.3 bits (186), Expect(2) = 4e-16
Identities = 27/46 (58%), Positives = 41/46 (89%)
Frame = -3
Query: 594 LTLGFFEDIYIPSHLLPSPSRSEPDPYRRYEVRWIWEFGDTKYLID 457
LTLGFFED+Y+P+ L+P+P+R EPDPY R ++RW+W++GD +++ID
Sbjct: 98 LTLGFFEDVYVPAPLIPTPNRCEPDPYNRNQMRWVWKYGDDEFIID 143
Score = 35.8 bits (81), Expect(2) = 4e-16
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -1
Query: 401 GSIDYDGLGPVSWWQDAEKVSQQLD 327
G+ID DGLGPVSWW+ +S D
Sbjct: 178 GTIDDDGLGPVSWWEACAPISDDED 202
>CDX86513.1 BnaC08g01900D [Brassica napus]
Length = 203
Score = 76.3 bits (186), Expect(2) = 5e-16
Identities = 27/46 (58%), Positives = 41/46 (89%)
Frame = -3
Query: 594 LTLGFFEDIYIPSHLLPSPSRSEPDPYRRYEVRWIWEFGDTKYLID 457
LTLGFFED+Y+P+ L+P+P+R EPDPY R ++RW+W++GD +++ID
Sbjct: 98 LTLGFFEDVYVPAPLIPTPNRCEPDPYNRNQMRWVWKYGDDEFIID 143
Score = 35.4 bits (80), Expect(2) = 5e-16
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -1
Query: 401 GSIDYDGLGPVSWWQDAEKVSQQLD 327
G+ID DGLGPVSWW+ +S D
Sbjct: 179 GTIDDDGLGPVSWWEACAPISDAED 203
>XP_013602966.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
isoform X1 [Brassica oleracea var. oleracea]
Length = 202
Score = 76.3 bits (186), Expect(2) = 5e-16
Identities = 27/46 (58%), Positives = 41/46 (89%)
Frame = -3
Query: 594 LTLGFFEDIYIPSHLLPSPSRSEPDPYRRYEVRWIWEFGDTKYLID 457
LTLGFFED+Y+P+ L+P+P+R EPDPY R ++RW+W++GD +++ID
Sbjct: 98 LTLGFFEDVYVPAPLIPTPNRCEPDPYNRNQMRWVWKYGDDEFIID 143
Score = 35.4 bits (80), Expect(2) = 5e-16
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -1
Query: 401 GSIDYDGLGPVSWWQDAEKVSQQLD 327
G+ID DGLGPVSWW+ +S D
Sbjct: 178 GTIDDDGLGPVSWWEACAPISDAED 202
>XP_018449375.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Raphanus sativus]
Length = 203
Score = 76.3 bits (186), Expect(2) = 9e-16
Identities = 27/46 (58%), Positives = 41/46 (89%)
Frame = -3
Query: 594 LTLGFFEDIYIPSHLLPSPSRSEPDPYRRYEVRWIWEFGDTKYLID 457
LTLGFFED+Y+P+ L+P+P+R EPDPY R ++RW+W++GD +++ID
Sbjct: 98 LTLGFFEDVYVPAPLIPTPNRCEPDPYNRNQMRWVWKYGDDEFIID 143
Score = 34.7 bits (78), Expect(2) = 9e-16
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 401 GSIDYDGLGPVSWWQDAEKVS 339
G+ID DGLGPVSWW+ +S
Sbjct: 178 GTIDDDGLGPVSWWEACAPIS 198
>XP_010475430.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Camelina sativa] XP_010475431.1 PREDICTED: DNA-directed
RNA polymerase III subunit RPC8-like [Camelina sativa]
Length = 203
Score = 73.6 bits (179), Expect(2) = 1e-15
Identities = 29/46 (63%), Positives = 37/46 (80%)
Frame = -3
Query: 594 LTLGFFEDIYIPSHLLPSPSRSEPDPYRRYEVRWIWEFGDTKYLID 457
LTLGFFEDIY+P+ L+P P+R EPDPY R ++RW+WEF Y+ID
Sbjct: 99 LTLGFFEDIYVPAPLIPIPNRCEPDPYNRKQMRWVWEFDGQDYIID 144
Score = 37.0 bits (84), Expect(2) = 1e-15
Identities = 12/23 (52%), Positives = 20/23 (86%)
Frame = -1
Query: 401 GSIDYDGLGPVSWWQDAEKVSQQ 333
G+ID DGLGPVSWW++ +++ ++
Sbjct: 179 GNIDDDGLGPVSWWENFDQIDEE 201
>XP_015080913.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X1
[Solanum pennellii] XP_015080914.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 isoform X1
[Solanum pennellii] XP_015080915.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 isoform X1
[Solanum pennellii]
Length = 199
Score = 77.4 bits (189), Expect(2) = 1e-15
Identities = 32/50 (64%), Positives = 41/50 (82%)
Frame = -3
Query: 594 LTLGFFEDIYIPSHLLPSPSRSEPDPYRRYEVRWIWEFGDTKYLIDGLDE 445
L+LGFF+DIY+P+ LLP PSRSEPDP + +VRWIW+F + Y IDG+DE
Sbjct: 105 LSLGFFDDIYVPAPLLPDPSRSEPDPENKNQVRWIWKFDELDYPIDGIDE 154
Score = 33.1 bits (74), Expect(2) = 1e-15
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 401 GSIDYDGLGPVSWW 360
GS+D DGLGP+SWW
Sbjct: 185 GSLDADGLGPISWW 198
>XP_010323226.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X1
[Solanum lycopersicum]
Length = 199
Score = 77.4 bits (189), Expect(2) = 1e-15
Identities = 32/50 (64%), Positives = 41/50 (82%)
Frame = -3
Query: 594 LTLGFFEDIYIPSHLLPSPSRSEPDPYRRYEVRWIWEFGDTKYLIDGLDE 445
L+LGFF+DIY+P+ LLP PSRSEPDP + +VRWIW+F + Y IDG+DE
Sbjct: 105 LSLGFFDDIYVPAPLLPDPSRSEPDPENKNQVRWIWKFDELDYPIDGIDE 154
Score = 33.1 bits (74), Expect(2) = 1e-15
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 401 GSIDYDGLGPVSWW 360
GS+D DGLGP+SWW
Sbjct: 185 GSLDADGLGPISWW 198
>XP_015080916.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X2
[Solanum pennellii]
Length = 193
Score = 77.4 bits (189), Expect(2) = 1e-15
Identities = 32/50 (64%), Positives = 41/50 (82%)
Frame = -3
Query: 594 LTLGFFEDIYIPSHLLPSPSRSEPDPYRRYEVRWIWEFGDTKYLIDGLDE 445
L+LGFF+DIY+P+ LLP PSRSEPDP + +VRWIW+F + Y IDG+DE
Sbjct: 99 LSLGFFDDIYVPAPLLPDPSRSEPDPENKNQVRWIWKFDELDYPIDGIDE 148
Score = 33.1 bits (74), Expect(2) = 1e-15
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 401 GSIDYDGLGPVSWW 360
GS+D DGLGP+SWW
Sbjct: 179 GSLDADGLGPISWW 192
>XP_004242644.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X2
[Solanum lycopersicum]
Length = 193
Score = 77.4 bits (189), Expect(2) = 1e-15
Identities = 32/50 (64%), Positives = 41/50 (82%)
Frame = -3
Query: 594 LTLGFFEDIYIPSHLLPSPSRSEPDPYRRYEVRWIWEFGDTKYLIDGLDE 445
L+LGFF+DIY+P+ LLP PSRSEPDP + +VRWIW+F + Y IDG+DE
Sbjct: 99 LSLGFFDDIYVPAPLLPDPSRSEPDPENKNQVRWIWKFDELDYPIDGIDE 148
Score = 33.1 bits (74), Expect(2) = 1e-15
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 401 GSIDYDGLGPVSWW 360
GS+D DGLGP+SWW
Sbjct: 179 GSLDADGLGPISWW 192