BLASTX nr result
ID: Phellodendron21_contig00030927
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00030927
(670 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KDO52429.1 hypothetical protein CISIN_1g001050mg [Citrus sinensis] 418 e-135
XP_006442883.1 hypothetical protein CICLE_v10018562mg [Citrus cl... 418 e-135
XP_012076429.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 363 e-114
OAY53599.1 hypothetical protein MANES_03G009000 [Manihot esculenta] 360 e-113
OAY27485.1 hypothetical protein MANES_16G129400 [Manihot esculenta] 345 e-110
EOY29338.1 DNA-directed RNA polymerase isoform 3 [Theobroma cacao] 345 e-108
OAY27484.1 hypothetical protein MANES_16G129400 [Manihot esculenta] 345 e-108
XP_007011717.2 PREDICTED: DNA-directed RNA polymerases IV and V ... 345 e-108
EOY29336.1 DNA-directed RNA polymerase isoform 1 [Theobroma cacao] 345 e-108
XP_002324332.2 DNA-directed RNA polymerase family protein [Popul... 343 e-107
XP_011036682.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 340 e-106
XP_002515428.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 340 e-106
KJB07693.1 hypothetical protein B456_001G037900 [Gossypium raimo... 335 e-105
XP_016744620.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 335 e-104
XP_012452401.1 PREDICTED: DNA-directed RNA polymerase D subunit ... 335 e-104
XP_017608025.1 PREDICTED: DNA-directed RNA polymerase D subunit ... 335 e-104
XP_008452849.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 325 e-100
OMO90703.1 hypothetical protein COLO4_18947 [Corchorus olitorius] 325 e-100
XP_004145500.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 324 e-100
XP_009363651.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 324 e-100
>KDO52429.1 hypothetical protein CISIN_1g001050mg [Citrus sinensis]
Length = 1173
Score = 418 bits (1074), Expect = e-135
Identities = 202/223 (90%), Positives = 215/223 (96%)
Frame = +1
Query: 1 SVRFGQVTLDKPSFFAGSGGDEHNMLPRHARLQHMTYSSRMKVNVQLQVYTQKRVTSDKF 180
S+RFGQVTLDKPSFFAG+GGDEH+M PRHARLQ+MTYSSRMKV VQ QVYTQKRVTSDKF
Sbjct: 85 SMRFGQVTLDKPSFFAGNGGDEHDMFPRHARLQNMTYSSRMKVKVQFQVYTQKRVTSDKF 144
Query: 181 KTGREQFVQKEVLNEETKDIIIGRIPVMVKSDLCWMKGAEKGDCDFDHGGYFIIKGAEKV 360
KTGREQ++QKEVL++ET +IIIGRIPVMVKSDLCWMKG EKGDCDFDHGGYFIIKGAEKV
Sbjct: 145 KTGREQYIQKEVLSDETTNIIIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIKGAEKV 204
Query: 361 FVAQEQICLKRLWVSNSLGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKTLSVYFLST 540
FVAQEQICLKRLWVSNS+GWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEK LSVYFLST
Sbjct: 205 FVAQEQICLKRLWVSNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKVLSVYFLST 264
Query: 541 EIPIWILFFSLGVKSDKEVVDLIDFTSEDCSILNILFASIHDA 669
EIPIWILFF+LGV SDKE+V+LIDFT EDCSILNILFASIHDA
Sbjct: 265 EIPIWILFFALGVSSDKEIVNLIDFTCEDCSILNILFASIHDA 307
>XP_006442883.1 hypothetical protein CICLE_v10018562mg [Citrus clementina]
XP_006478802.1 PREDICTED: DNA-directed RNA polymerases
IV and V subunit 2-like [Citrus sinensis] ESR56123.1
hypothetical protein CICLE_v10018562mg [Citrus
clementina]
Length = 1198
Score = 418 bits (1074), Expect = e-135
Identities = 202/223 (90%), Positives = 214/223 (95%)
Frame = +1
Query: 1 SVRFGQVTLDKPSFFAGSGGDEHNMLPRHARLQHMTYSSRMKVNVQLQVYTQKRVTSDKF 180
S+RFGQVTLDKPSFFAG+GGDEH+M PRHARLQ+MTYSSRMKV VQ QVYTQKRVTSDKF
Sbjct: 110 SMRFGQVTLDKPSFFAGNGGDEHDMFPRHARLQNMTYSSRMKVKVQFQVYTQKRVTSDKF 169
Query: 181 KTGREQFVQKEVLNEETKDIIIGRIPVMVKSDLCWMKGAEKGDCDFDHGGYFIIKGAEKV 360
KTGREQ++QKEVL++E DIIIGRIPVMVKSDLCWMKG EKGDCDFDHGGYFIIKGAEKV
Sbjct: 170 KTGREQYIQKEVLSDEATDIIIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIKGAEKV 229
Query: 361 FVAQEQICLKRLWVSNSLGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKTLSVYFLST 540
FVAQEQICLKRLWVSNS+GWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEK LSVYFLST
Sbjct: 230 FVAQEQICLKRLWVSNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKVLSVYFLST 289
Query: 541 EIPIWILFFSLGVKSDKEVVDLIDFTSEDCSILNILFASIHDA 669
EIPIWILFF+LGV SDKE+V+LIDFT EDCSILNILFASIHDA
Sbjct: 290 EIPIWILFFALGVSSDKEIVNLIDFTCEDCSILNILFASIHDA 332
>XP_012076429.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Jatropha curcas] XP_012076430.1 PREDICTED: DNA-directed
RNA polymerases IV and V subunit 2-like [Jatropha
curcas] KDP33515.1 hypothetical protein JCGZ_07086
[Jatropha curcas]
Length = 1209
Score = 363 bits (931), Expect = e-114
Identities = 172/223 (77%), Positives = 200/223 (89%)
Frame = +1
Query: 1 SVRFGQVTLDKPSFFAGSGGDEHNMLPRHARLQHMTYSSRMKVNVQLQVYTQKRVTSDKF 180
SVRFG+VTLDKPSF+ GS G +HNMLPRHARLQ+MTYSSRMKVNV ++VYTQK + SDKF
Sbjct: 126 SVRFGKVTLDKPSFWGGSDGTDHNMLPRHARLQNMTYSSRMKVNVTVEVYTQKVIRSDKF 185
Query: 181 KTGREQFVQKEVLNEETKDIIIGRIPVMVKSDLCWMKGAEKGDCDFDHGGYFIIKGAEKV 360
KTG++QFV K VL+ + +DIIIGRIPVMVKSDLCWMK AE+ DCDFDHGGYF+IKGAEKV
Sbjct: 186 KTGKDQFVDKVVLSTDNRDIIIGRIPVMVKSDLCWMKTAERSDCDFDHGGYFLIKGAEKV 245
Query: 361 FVAQEQICLKRLWVSNSLGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKTLSVYFLST 540
F+AQEQ+CLKRLW+SN WTV+YKSE KRNRLIVRLVD+SK EDIKG +K L+VYFLST
Sbjct: 246 FIAQEQVCLKRLWISNIQSWTVSYKSEIKRNRLIVRLVDLSKVEDIKGEKKGLNVYFLST 305
Query: 541 EIPIWILFFSLGVKSDKEVVDLIDFTSEDCSILNILFASIHDA 669
EIP+WILFF+LG+ SDKEV+DLID+ +ED SI+NI FASIHDA
Sbjct: 306 EIPLWILFFALGITSDKEVIDLIDYNTEDASIVNIFFASIHDA 348
>OAY53599.1 hypothetical protein MANES_03G009000 [Manihot esculenta]
Length = 1205
Score = 360 bits (924), Expect = e-113
Identities = 174/223 (78%), Positives = 200/223 (89%)
Frame = +1
Query: 1 SVRFGQVTLDKPSFFAGSGGDEHNMLPRHARLQHMTYSSRMKVNVQLQVYTQKRVTSDKF 180
S+RFG+VTLDKPSF+AGS G EHNMLPRHARLQ+MTYSSRMKVNV ++VYT+K V SDKF
Sbjct: 122 SIRFGKVTLDKPSFWAGSDGGEHNMLPRHARLQNMTYSSRMKVNVNVEVYTRKIVRSDKF 181
Query: 181 KTGREQFVQKEVLNEETKDIIIGRIPVMVKSDLCWMKGAEKGDCDFDHGGYFIIKGAEKV 360
KTG++QFV K VL + +DII+GR+PVMVKSDLCWMK EKGDCDFDHGGYF+IKGAEKV
Sbjct: 182 KTGKDQFVDKVVLTTDNRDIIVGRMPVMVKSDLCWMKTVEKGDCDFDHGGYFLIKGAEKV 241
Query: 361 FVAQEQICLKRLWVSNSLGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKTLSVYFLST 540
F+AQEQICLKRLW+SN+ GWTVAYKSE KRNRLIVRLV +SK ++IKG K L+VYFLST
Sbjct: 242 FIAQEQICLKRLWISNTQGWTVAYKSEVKRNRLIVRLVGLSKDDNIKGETKGLTVYFLST 301
Query: 541 EIPIWILFFSLGVKSDKEVVDLIDFTSEDCSILNILFASIHDA 669
EIPIWILFF+LGVKSDKEVVDLID+ +E+ SI+NI FASI DA
Sbjct: 302 EIPIWILFFALGVKSDKEVVDLIDYNTENASIMNIFFASILDA 344
>OAY27485.1 hypothetical protein MANES_16G129400 [Manihot esculenta]
Length = 950
Score = 345 bits (886), Expect = e-110
Identities = 165/225 (73%), Positives = 199/225 (88%), Gaps = 2/225 (0%)
Frame = +1
Query: 1 SVRFGQVTLDKPSFFAGSGGDEHNMLPRHARLQHMTYSSRMKVNVQLQVYTQKRVTSDKF 180
SVRFG+VT+D+PSF+AGS G EHNM PRHARLQ+MTYS+RMKVNV ++VYTQK V+SD+F
Sbjct: 119 SVRFGKVTVDRPSFWAGSDGGEHNMFPRHARLQNMTYSARMKVNVTVEVYTQKVVSSDEF 178
Query: 181 KTGREQFVQKEVLNEETKDIIIGRIPVMVKSDLCWMKGAEKGDCDFDHGGYFIIKGAEKV 360
+TG++ FV K VL+ +++DIIIGR+PVMVKSDLCWM+ EKGDCDFDHGGYF+IKGAEKV
Sbjct: 179 RTGKDHFVDKVVLSTDSRDIIIGRMPVMVKSDLCWMQTVEKGDCDFDHGGYFLIKGAEKV 238
Query: 361 FVAQEQICLKRLWVSNSLGWTVAYKSENKRNRLIVRL--VDMSKFEDIKGGEKTLSVYFL 534
+AQEQ CLKRLW+SN+ GWTVAYKSE KRNRLIVRL V SK E++K G+K L+VYFL
Sbjct: 239 LIAQEQSCLKRLWISNTQGWTVAYKSEVKRNRLIVRLEPVGPSKDENLKEGKKGLTVYFL 298
Query: 535 STEIPIWILFFSLGVKSDKEVVDLIDFTSEDCSILNILFASIHDA 669
STEIP+WILFF+LG+KSDKEV+DLID+ ED SI+NI+F SIHDA
Sbjct: 299 STEIPLWILFFALGIKSDKEVIDLIDYNMEDASIMNIIFGSIHDA 343
>EOY29338.1 DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
Length = 1073
Score = 345 bits (884), Expect = e-108
Identities = 164/222 (73%), Positives = 196/222 (88%)
Frame = +1
Query: 4 VRFGQVTLDKPSFFAGSGGDEHNMLPRHARLQHMTYSSRMKVNVQLQVYTQKRVTSDKFK 183
VRFG+VT+++P+F+A SGG+E NMLPRHARLQ+MTYSSRMKVNV LQVYT K V SDKFK
Sbjct: 101 VRFGKVTVERPTFWAVSGGNELNMLPRHARLQNMTYSSRMKVNVDLQVYTAKSVKSDKFK 160
Query: 184 TGREQFVQKEVLNEETKDIIIGRIPVMVKSDLCWMKGAEKGDCDFDHGGYFIIKGAEKVF 363
TGRE+FV++EV+ ++ +DIIIGRIPVMV+SDLCWM EK DCDFDHGGYF+IKG EK+F
Sbjct: 161 TGREEFVEEEVVYQDNRDIIIGRIPVMVRSDLCWMNEVEKADCDFDHGGYFLIKGTEKIF 220
Query: 364 VAQEQICLKRLWVSNSLGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKTLSVYFLSTE 543
+AQEQI +KRLW+SNS GWT+AY+SE KRNRLI+RLV+ SK E IKGGEK L+VYFLSTE
Sbjct: 221 IAQEQISMKRLWISNSQGWTIAYRSEVKRNRLIIRLVENSKVEYIKGGEKVLTVYFLSTE 280
Query: 544 IPIWILFFSLGVKSDKEVVDLIDFTSEDCSILNILFASIHDA 669
IP+W+LFF+LGV SDKEVV+LID+ S D SI NILFASI +A
Sbjct: 281 IPVWVLFFALGVSSDKEVVNLIDYESNDSSITNILFASIRNA 322
>OAY27484.1 hypothetical protein MANES_16G129400 [Manihot esculenta]
Length = 1204
Score = 345 bits (886), Expect = e-108
Identities = 165/225 (73%), Positives = 199/225 (88%), Gaps = 2/225 (0%)
Frame = +1
Query: 1 SVRFGQVTLDKPSFFAGSGGDEHNMLPRHARLQHMTYSSRMKVNVQLQVYTQKRVTSDKF 180
SVRFG+VT+D+PSF+AGS G EHNM PRHARLQ+MTYS+RMKVNV ++VYTQK V+SD+F
Sbjct: 119 SVRFGKVTVDRPSFWAGSDGGEHNMFPRHARLQNMTYSARMKVNVTVEVYTQKVVSSDEF 178
Query: 181 KTGREQFVQKEVLNEETKDIIIGRIPVMVKSDLCWMKGAEKGDCDFDHGGYFIIKGAEKV 360
+TG++ FV K VL+ +++DIIIGR+PVMVKSDLCWM+ EKGDCDFDHGGYF+IKGAEKV
Sbjct: 179 RTGKDHFVDKVVLSTDSRDIIIGRMPVMVKSDLCWMQTVEKGDCDFDHGGYFLIKGAEKV 238
Query: 361 FVAQEQICLKRLWVSNSLGWTVAYKSENKRNRLIVRL--VDMSKFEDIKGGEKTLSVYFL 534
+AQEQ CLKRLW+SN+ GWTVAYKSE KRNRLIVRL V SK E++K G+K L+VYFL
Sbjct: 239 LIAQEQSCLKRLWISNTQGWTVAYKSEVKRNRLIVRLEPVGPSKDENLKEGKKGLTVYFL 298
Query: 535 STEIPIWILFFSLGVKSDKEVVDLIDFTSEDCSILNILFASIHDA 669
STEIP+WILFF+LG+KSDKEV+DLID+ ED SI+NI+F SIHDA
Sbjct: 299 STEIPLWILFFALGIKSDKEVIDLIDYNMEDASIMNIIFGSIHDA 343
>XP_007011717.2 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2
[Theobroma cacao]
Length = 1184
Score = 345 bits (884), Expect = e-108
Identities = 164/222 (73%), Positives = 196/222 (88%)
Frame = +1
Query: 4 VRFGQVTLDKPSFFAGSGGDEHNMLPRHARLQHMTYSSRMKVNVQLQVYTQKRVTSDKFK 183
VRFG+VT+++P+F+A SGG+E NMLPRHARLQ+MTYSSRMKVNV LQVYT K V SDKFK
Sbjct: 101 VRFGKVTVERPTFWAVSGGNELNMLPRHARLQNMTYSSRMKVNVDLQVYTAKSVKSDKFK 160
Query: 184 TGREQFVQKEVLNEETKDIIIGRIPVMVKSDLCWMKGAEKGDCDFDHGGYFIIKGAEKVF 363
TGRE+FV++EV+ ++ +DIIIGRIPVMV+SDLCWM EK DCDFDHGGYF+IKG EK+F
Sbjct: 161 TGREEFVEEEVVYQDNRDIIIGRIPVMVRSDLCWMNEVEKADCDFDHGGYFLIKGTEKIF 220
Query: 364 VAQEQICLKRLWVSNSLGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKTLSVYFLSTE 543
+AQEQI +KRLW+SNS GWT+AY+SE KRNRLI+RLV+ SK E IKGGEK L+VYFLSTE
Sbjct: 221 IAQEQISMKRLWISNSQGWTIAYRSEVKRNRLIIRLVENSKVEYIKGGEKVLTVYFLSTE 280
Query: 544 IPIWILFFSLGVKSDKEVVDLIDFTSEDCSILNILFASIHDA 669
IP+W+LFF+LGV SDKEVV+LID+ S D SI NILFASI +A
Sbjct: 281 IPVWVLFFALGVSSDKEVVNLIDYESNDSSITNILFASIRNA 322
>EOY29336.1 DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
Length = 1184
Score = 345 bits (884), Expect = e-108
Identities = 164/222 (73%), Positives = 196/222 (88%)
Frame = +1
Query: 4 VRFGQVTLDKPSFFAGSGGDEHNMLPRHARLQHMTYSSRMKVNVQLQVYTQKRVTSDKFK 183
VRFG+VT+++P+F+A SGG+E NMLPRHARLQ+MTYSSRMKVNV LQVYT K V SDKFK
Sbjct: 101 VRFGKVTVERPTFWAVSGGNELNMLPRHARLQNMTYSSRMKVNVDLQVYTAKSVKSDKFK 160
Query: 184 TGREQFVQKEVLNEETKDIIIGRIPVMVKSDLCWMKGAEKGDCDFDHGGYFIIKGAEKVF 363
TGRE+FV++EV+ ++ +DIIIGRIPVMV+SDLCWM EK DCDFDHGGYF+IKG EK+F
Sbjct: 161 TGREEFVEEEVVYQDNRDIIIGRIPVMVRSDLCWMNEVEKADCDFDHGGYFLIKGTEKIF 220
Query: 364 VAQEQICLKRLWVSNSLGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKTLSVYFLSTE 543
+AQEQI +KRLW+SNS GWT+AY+SE KRNRLI+RLV+ SK E IKGGEK L+VYFLSTE
Sbjct: 221 IAQEQISMKRLWISNSQGWTIAYRSEVKRNRLIIRLVENSKVEYIKGGEKVLTVYFLSTE 280
Query: 544 IPIWILFFSLGVKSDKEVVDLIDFTSEDCSILNILFASIHDA 669
IP+W+LFF+LGV SDKEVV+LID+ S D SI NILFASI +A
Sbjct: 281 IPVWVLFFALGVSSDKEVVNLIDYESNDSSITNILFASIRNA 322
>XP_002324332.2 DNA-directed RNA polymerase family protein [Populus trichocarpa]
EEF02897.2 DNA-directed RNA polymerase family protein
[Populus trichocarpa]
Length = 1181
Score = 343 bits (879), Expect = e-107
Identities = 165/224 (73%), Positives = 195/224 (87%), Gaps = 1/224 (0%)
Frame = +1
Query: 1 SVRFGQVTLDKPSFFAGSGGD-EHNMLPRHARLQHMTYSSRMKVNVQLQVYTQKRVTSDK 177
SVRFG+VTLD+PSF+ G+ D EHNM PRHARLQ+MTYS+RMK++V +QVYTQ SDK
Sbjct: 107 SVRFGKVTLDRPSFWGGTSSDAEHNMFPRHARLQNMTYSARMKIHVNVQVYTQTVGRSDK 166
Query: 178 FKTGREQFVQKEVLNEETKDIIIGRIPVMVKSDLCWMKGAEKGDCDFDHGGYFIIKGAEK 357
FKTG ++ VQK V++ E ++IIIGRIPVMVKSDLCW+ EKGDCDFDHGGYF+IKGAEK
Sbjct: 167 FKTGIDKVVQKNVVHTENREIIIGRIPVMVKSDLCWLTTVEKGDCDFDHGGYFLIKGAEK 226
Query: 358 VFVAQEQICLKRLWVSNSLGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKTLSVYFLS 537
VF+AQEQIC+KRLW+SNS GWTV+YKSE KRNRLIVRLV++SK E IKG +K L VYFLS
Sbjct: 227 VFIAQEQICMKRLWISNSQGWTVSYKSEVKRNRLIVRLVELSKLEYIKGEKKGLCVYFLS 286
Query: 538 TEIPIWILFFSLGVKSDKEVVDLIDFTSEDCSILNILFASIHDA 669
TEIP+WILFF+LGV+SDKEV+DLID+ S D SI+NI FASIHDA
Sbjct: 287 TEIPLWILFFALGVRSDKEVIDLIDYASNDASIVNIFFASIHDA 330
>XP_011036682.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Populus euphratica]
Length = 1190
Score = 340 bits (872), Expect = e-106
Identities = 163/224 (72%), Positives = 193/224 (86%), Gaps = 1/224 (0%)
Frame = +1
Query: 1 SVRFGQVTLDKPSFFAGSGGD-EHNMLPRHARLQHMTYSSRMKVNVQLQVYTQKRVTSDK 177
SVR G+VTLD+PSF+ G+ D EHNM PRHARLQ+MTYS+RMK++ +QVYTQ SDK
Sbjct: 105 SVRLGKVTLDRPSFWGGTSSDAEHNMFPRHARLQNMTYSARMKIHANVQVYTQSVGRSDK 164
Query: 178 FKTGREQFVQKEVLNEETKDIIIGRIPVMVKSDLCWMKGAEKGDCDFDHGGYFIIKGAEK 357
FKTG ++ VQK V++ E ++IIIGRIPVMVKSDLCW+ EKGDCDFDHGGYF+IKGAEK
Sbjct: 165 FKTGIDKVVQKNVVHTENREIIIGRIPVMVKSDLCWLTAVEKGDCDFDHGGYFLIKGAEK 224
Query: 358 VFVAQEQICLKRLWVSNSLGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKTLSVYFLS 537
VF+AQEQIC+KRLW+SNS GWTV+YKSE KRNRLIVRLV++SK E IKG +K L VYFLS
Sbjct: 225 VFIAQEQICMKRLWISNSQGWTVSYKSEVKRNRLIVRLVELSKLEYIKGEKKGLCVYFLS 284
Query: 538 TEIPIWILFFSLGVKSDKEVVDLIDFTSEDCSILNILFASIHDA 669
TEIP+WILFF+LGV+SDKEV+DLID+ S D SI+NI FASIHDA
Sbjct: 285 TEIPLWILFFALGVRSDKEVIDLIDYASNDASIVNIFFASIHDA 328
>XP_002515428.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Ricinus
communis] EEF46877.1 DNA-directed RNA polymerase
subunit, putative [Ricinus communis]
Length = 1203
Score = 340 bits (871), Expect = e-106
Identities = 163/223 (73%), Positives = 193/223 (86%)
Frame = +1
Query: 1 SVRFGQVTLDKPSFFAGSGGDEHNMLPRHARLQHMTYSSRMKVNVQLQVYTQKRVTSDKF 180
SV+FG+V L+KP+F+ SG DEH MLPRHARLQ+MTYSS+MKVNV ++VYT+K V SDKF
Sbjct: 122 SVKFGKVALEKPTFW--SGADEHKMLPRHARLQNMTYSSKMKVNVSVEVYTRKVVRSDKF 179
Query: 181 KTGREQFVQKEVLNEETKDIIIGRIPVMVKSDLCWMKGAEKGDCDFDHGGYFIIKGAEKV 360
KTG++Q+V KEVLN + ++I IG +PVMVKSDLCWMK AEKGDCDFDHGGYF+IKGAEKV
Sbjct: 180 KTGKDQYVDKEVLNTDNRNITIGSLPVMVKSDLCWMKTAEKGDCDFDHGGYFLIKGAEKV 239
Query: 361 FVAQEQICLKRLWVSNSLGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKTLSVYFLST 540
F+AQEQICLKRLW+SN GWTV+YKSE KRNRLIVRLV +S ED+K +K L+VYFLST
Sbjct: 240 FIAQEQICLKRLWISNIQGWTVSYKSEIKRNRLIVRLVGLSALEDVKAEKKCLTVYFLST 299
Query: 541 EIPIWILFFSLGVKSDKEVVDLIDFTSEDCSILNILFASIHDA 669
EIP+WILFF+LGV SDKEV+DLI + S D I+NI FASIHDA
Sbjct: 300 EIPLWILFFALGVTSDKEVIDLIGYGSNDARIVNIFFASIHDA 342
>KJB07693.1 hypothetical protein B456_001G037900 [Gossypium raimondii]
Length = 1038
Score = 335 bits (860), Expect = e-105
Identities = 160/222 (72%), Positives = 195/222 (87%)
Frame = +1
Query: 4 VRFGQVTLDKPSFFAGSGGDEHNMLPRHARLQHMTYSSRMKVNVQLQVYTQKRVTSDKFK 183
V+FG+VT+++P+F+A +GG+E NMLPRHARLQ+MTYSSRMKV V+LQVYT K V SDKFK
Sbjct: 116 VKFGKVTVERPTFWAVTGGNELNMLPRHARLQNMTYSSRMKVTVELQVYTAKSVKSDKFK 175
Query: 184 TGREQFVQKEVLNEETKDIIIGRIPVMVKSDLCWMKGAEKGDCDFDHGGYFIIKGAEKVF 363
TGRE+ V++E+++++ ++IIIGRIPVMVKS+LCWM EK DCDFDHGGYF+IKGAEK+F
Sbjct: 176 TGREEIVEEEIVHQDNREIIIGRIPVMVKSELCWMNEVEKSDCDFDHGGYFLIKGAEKIF 235
Query: 364 VAQEQICLKRLWVSNSLGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKTLSVYFLSTE 543
+AQEQI LKRLW+SN GWTVAY+SE KRNRLI+RLV+ SK E IKGGEK L+V+FLS E
Sbjct: 236 IAQEQISLKRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKVEYIKGGEKILTVFFLSIE 295
Query: 544 IPIWILFFSLGVKSDKEVVDLIDFTSEDCSILNILFASIHDA 669
IP+WILFF+LGV+SDKEVV LID+ S D SI NILFASI DA
Sbjct: 296 IPVWILFFALGVRSDKEVVSLIDYGSSDSSISNILFASIRDA 337
>XP_016744620.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Gossypium hirsutum]
Length = 1204
Score = 335 bits (860), Expect = e-104
Identities = 160/222 (72%), Positives = 195/222 (87%)
Frame = +1
Query: 4 VRFGQVTLDKPSFFAGSGGDEHNMLPRHARLQHMTYSSRMKVNVQLQVYTQKRVTSDKFK 183
V+FG+VT+++P+F+A +GG+E NMLPRHARLQ+MTYSSRMKV V+LQVYT K V SDKFK
Sbjct: 116 VKFGKVTVERPTFWAVTGGNELNMLPRHARLQNMTYSSRMKVTVELQVYTAKSVKSDKFK 175
Query: 184 TGREQFVQKEVLNEETKDIIIGRIPVMVKSDLCWMKGAEKGDCDFDHGGYFIIKGAEKVF 363
TGRE+ V++E+++++ ++IIIGRIPVMVKS+LCWM EK DCDFDHGGYF+IKGAEK+F
Sbjct: 176 TGREEIVEEEIVHQDNREIIIGRIPVMVKSELCWMNEVEKSDCDFDHGGYFLIKGAEKIF 235
Query: 364 VAQEQICLKRLWVSNSLGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKTLSVYFLSTE 543
+AQEQI LKRLW+SN GWTVAY+SE KRNRLI+RLV+ SK E IKGGEK L+V+FLS E
Sbjct: 236 IAQEQISLKRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKVEYIKGGEKILTVFFLSIE 295
Query: 544 IPIWILFFSLGVKSDKEVVDLIDFTSEDCSILNILFASIHDA 669
IP+WILFF+LGV+SDKEVV LID+ S D SI NILFASI DA
Sbjct: 296 IPVWILFFALGVRSDKEVVSLIDYGSSDSSISNILFASIRDA 337
>XP_012452401.1 PREDICTED: DNA-directed RNA polymerase D subunit 2b-like [Gossypium
raimondii] KJB07692.1 hypothetical protein
B456_001G037900 [Gossypium raimondii]
Length = 1204
Score = 335 bits (860), Expect = e-104
Identities = 160/222 (72%), Positives = 195/222 (87%)
Frame = +1
Query: 4 VRFGQVTLDKPSFFAGSGGDEHNMLPRHARLQHMTYSSRMKVNVQLQVYTQKRVTSDKFK 183
V+FG+VT+++P+F+A +GG+E NMLPRHARLQ+MTYSSRMKV V+LQVYT K V SDKFK
Sbjct: 116 VKFGKVTVERPTFWAVTGGNELNMLPRHARLQNMTYSSRMKVTVELQVYTAKSVKSDKFK 175
Query: 184 TGREQFVQKEVLNEETKDIIIGRIPVMVKSDLCWMKGAEKGDCDFDHGGYFIIKGAEKVF 363
TGRE+ V++E+++++ ++IIIGRIPVMVKS+LCWM EK DCDFDHGGYF+IKGAEK+F
Sbjct: 176 TGREEIVEEEIVHQDNREIIIGRIPVMVKSELCWMNEVEKSDCDFDHGGYFLIKGAEKIF 235
Query: 364 VAQEQICLKRLWVSNSLGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKTLSVYFLSTE 543
+AQEQI LKRLW+SN GWTVAY+SE KRNRLI+RLV+ SK E IKGGEK L+V+FLS E
Sbjct: 236 IAQEQISLKRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKVEYIKGGEKILTVFFLSIE 295
Query: 544 IPIWILFFSLGVKSDKEVVDLIDFTSEDCSILNILFASIHDA 669
IP+WILFF+LGV+SDKEVV LID+ S D SI NILFASI DA
Sbjct: 296 IPVWILFFALGVRSDKEVVSLIDYGSSDSSISNILFASIRDA 337
>XP_017608025.1 PREDICTED: DNA-directed RNA polymerase D subunit 2b-like [Gossypium
arboreum] KHG03399.1 DNA-directed RNA polymerase D
subunit 2a -like protein [Gossypium arboreum]
Length = 1204
Score = 335 bits (860), Expect = e-104
Identities = 160/222 (72%), Positives = 195/222 (87%)
Frame = +1
Query: 4 VRFGQVTLDKPSFFAGSGGDEHNMLPRHARLQHMTYSSRMKVNVQLQVYTQKRVTSDKFK 183
V+FG+VT+++P+F+A +GG+E NMLPRHARLQ+MTYSSRMKV V+LQVYT K V SDKFK
Sbjct: 116 VKFGKVTVERPTFWAVTGGNELNMLPRHARLQNMTYSSRMKVTVELQVYTAKSVKSDKFK 175
Query: 184 TGREQFVQKEVLNEETKDIIIGRIPVMVKSDLCWMKGAEKGDCDFDHGGYFIIKGAEKVF 363
TGRE+ V++E+++++ ++IIIGRIPVMVKS+LCWM EK DCDFDHGGYF+IKGAEK+F
Sbjct: 176 TGREEIVEEEIVHQDNREIIIGRIPVMVKSELCWMNEVEKSDCDFDHGGYFLIKGAEKIF 235
Query: 364 VAQEQICLKRLWVSNSLGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKTLSVYFLSTE 543
+AQEQI LKRLW+SN GWTVAY+SE KRNRLI+RLV+ SK E IKGGEK L+V+FLS E
Sbjct: 236 IAQEQISLKRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKVEYIKGGEKILTVFFLSIE 295
Query: 544 IPIWILFFSLGVKSDKEVVDLIDFTSEDCSILNILFASIHDA 669
IP+WILFF+LGV+SDKEVV LID+ S D SI NILFASI DA
Sbjct: 296 IPVWILFFALGVRSDKEVVSLIDYGSSDSSISNILFASIRDA 337
>XP_008452849.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Cucumis melo]
Length = 1197
Score = 325 bits (833), Expect = e-100
Identities = 151/225 (67%), Positives = 192/225 (85%), Gaps = 3/225 (1%)
Frame = +1
Query: 1 SVRFGQVTLDKPSFFAGSG-GDEHNMLPRHARLQHMTYSSRMKVNVQLQVYTQKRVTSDK 177
SV+FG+VTLDKP F+ G+ G E+NMLPRHARLQ+MTYSSRMK+N+ L++YTQK V+SDK
Sbjct: 111 SVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKINISLEIYTQKLVSSDK 170
Query: 178 FKTGREQFVQKEVLN--EETKDIIIGRIPVMVKSDLCWMKGAEKGDCDFDHGGYFIIKGA 351
FKTG++Q+V KE + + +D+ IGR+PVMV SDLCWMK +K DC+FD GGYF+IKGA
Sbjct: 171 FKTGKDQYVDKEPVEGASDNRDVFIGRLPVMVNSDLCWMKDEQKRDCEFDRGGYFLIKGA 230
Query: 352 EKVFVAQEQICLKRLWVSNSLGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKTLSVYF 531
EK+F+AQEQICL+RLW+SN GWTVAY+SE KRNRLI+RLV+ SK ED+K EK L+VYF
Sbjct: 231 EKIFIAQEQICLRRLWISNVQGWTVAYRSEVKRNRLIIRLVENSKSEDLKSKEKVLNVYF 290
Query: 532 LSTEIPIWILFFSLGVKSDKEVVDLIDFTSEDCSILNILFASIHD 666
LSTE+P+WILFF+LGV SDKE+VDLID+ +D ++LNILFAS+ +
Sbjct: 291 LSTEVPVWILFFALGVSSDKEIVDLIDYGRDDPTVLNILFASVRE 335
>OMO90703.1 hypothetical protein COLO4_18947 [Corchorus olitorius]
Length = 1201
Score = 325 bits (833), Expect = e-100
Identities = 153/222 (68%), Positives = 191/222 (86%)
Frame = +1
Query: 4 VRFGQVTLDKPSFFAGSGGDEHNMLPRHARLQHMTYSSRMKVNVQLQVYTQKRVTSDKFK 183
V+FG+V++++P+ +A SGG E NMLPRHARLQ+MTYS++MKV V+L+VYT++ V SDKFK
Sbjct: 103 VKFGKVSVERPTCWAVSGGTELNMLPRHARLQNMTYSAKMKVEVELKVYTKRIVKSDKFK 162
Query: 184 TGREQFVQKEVLNEETKDIIIGRIPVMVKSDLCWMKGAEKGDCDFDHGGYFIIKGAEKVF 363
TGRE+ ++E++ E+ ++I +GR+PVMVKSDLCWM EK DCDFDHGGYF+IKGAEK+F
Sbjct: 163 TGREEIREEEIVYEDKREIFLGRLPVMVKSDLCWMSEVEKADCDFDHGGYFLIKGAEKIF 222
Query: 364 VAQEQICLKRLWVSNSLGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKTLSVYFLSTE 543
+AQEQI LKRLW+SNS GWT+AY+SE KRNRLIVRLVD +K + IKGGEK L+VYFLST
Sbjct: 223 IAQEQISLKRLWISNSQGWTIAYRSEVKRNRLIVRLVDSAKVDSIKGGEKVLNVYFLSTS 282
Query: 544 IPIWILFFSLGVKSDKEVVDLIDFTSEDCSILNILFASIHDA 669
IP+WILFF+LGV SDKEVVDLID+ S+D I NILFASI A
Sbjct: 283 IPVWILFFALGVSSDKEVVDLIDYGSDDSGISNILFASIRHA 324
>XP_004145500.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Cucumis
sativus] KGN55429.1 hypothetical protein Csa_4G651950
[Cucumis sativus]
Length = 1197
Score = 324 bits (831), Expect = e-100
Identities = 150/225 (66%), Positives = 192/225 (85%), Gaps = 3/225 (1%)
Frame = +1
Query: 1 SVRFGQVTLDKPSFFAGSG-GDEHNMLPRHARLQHMTYSSRMKVNVQLQVYTQKRVTSDK 177
+V+FG+VTLDKP F+ G+ G E+NMLPRHARLQ+MTYSSRMK+N+ L++YTQK V+SDK
Sbjct: 111 TVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKINISLEIYTQKLVSSDK 170
Query: 178 FKTGREQFVQKEVLN--EETKDIIIGRIPVMVKSDLCWMKGAEKGDCDFDHGGYFIIKGA 351
FKTG++Q+V KE + + +D+ IGR+PVMV SDLCWMK +K DC+FD GGYF+IKGA
Sbjct: 171 FKTGKDQYVDKEPVEGASDNRDVFIGRLPVMVNSDLCWMKDGQKRDCEFDRGGYFLIKGA 230
Query: 352 EKVFVAQEQICLKRLWVSNSLGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKTLSVYF 531
EK+F+AQEQICL+RLW+SN GWTVAY+SE KRNRLI+RLV+ SK ED+K EK L+VYF
Sbjct: 231 EKIFIAQEQICLRRLWISNVQGWTVAYRSEVKRNRLIIRLVENSKSEDLKSKEKVLNVYF 290
Query: 532 LSTEIPIWILFFSLGVKSDKEVVDLIDFTSEDCSILNILFASIHD 666
LSTE+P+WILFF+LGV SDKE+VDLID+ +D ++LNILFAS+ +
Sbjct: 291 LSTEVPVWILFFALGVSSDKEIVDLIDYGRDDPTVLNILFASVRE 335
>XP_009363651.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Pyrus x bretschneideri] XP_009363658.1 PREDICTED:
DNA-directed RNA polymerases IV and V subunit 2-like
[Pyrus x bretschneideri] XP_009363667.1 PREDICTED:
DNA-directed RNA polymerases IV and V subunit 2-like
[Pyrus x bretschneideri] XP_009363676.1 PREDICTED:
DNA-directed RNA polymerases IV and V subunit 2-like
[Pyrus x bretschneideri]
Length = 1203
Score = 324 bits (830), Expect = e-100
Identities = 154/223 (69%), Positives = 192/223 (86%), Gaps = 1/223 (0%)
Frame = +1
Query: 4 VRFGQVTLDKPSFFAGSGGD-EHNMLPRHARLQHMTYSSRMKVNVQLQVYTQKRVTSDKF 180
V+FG VTL +PSF+ GS D E+NMLPRHARLQ+MTY S+MKVN+ ++VY Q+ V+SDKF
Sbjct: 115 VKFGTVTLGRPSFWGGSDNDKEYNMLPRHARLQNMTYCSKMKVNITVEVYNQRLVSSDKF 174
Query: 181 KTGREQFVQKEVLNEETKDIIIGRIPVMVKSDLCWMKGAEKGDCDFDHGGYFIIKGAEKV 360
KTG+E+F+ KE+L+ +T+DI IG +PVMVKSDLCWMK EKGDCDFDHGGYFIIKGAEK
Sbjct: 175 KTGKERFLDKEILSTDTRDITIGSVPVMVKSDLCWMKDVEKGDCDFDHGGYFIIKGAEKT 234
Query: 361 FVAQEQICLKRLWVSNSLGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKTLSVYFLST 540
F+AQEQ CLK+L ++N+ G TVAY+SE KR+RLI+RLV +SK E+I+G EK L+VYF+ST
Sbjct: 235 FIAQEQSCLKKLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIEGVEKVLTVYFMST 294
Query: 541 EIPIWILFFSLGVKSDKEVVDLIDFTSEDCSILNILFASIHDA 669
EIP+W+ FF+LGV SD+EV+DLID+ SED SILNILFASI DA
Sbjct: 295 EIPVWVWFFALGVSSDREVIDLIDYGSEDASILNILFASIRDA 337