BLASTX nr result

ID: Phellodendron21_contig00030536 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00030536
         (480 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YP_009045731.1 orf148b (mitochondrion) [Batis maritima] AIC83334...    79   7e-17
NP_064047.1 orf169 gene product (mitochondrion) [Beta vulgaris s...    63   2e-09
CBJ23345.1 hypothetical protein (mitochondrion) [Beta vulgaris s...    63   2e-09
XP_016500820.1 PREDICTED: NADH-ubiquinone oxidoreductase chain 6...    60   4e-08
XP_003612011.1 hypothetical protein MTR_5g020310 [Medicago trunc...    54   3e-06
KXG21685.1 hypothetical protein SORBI_009G095600 [Sorghum bicolor]     53   7e-06

>YP_009045731.1 orf148b (mitochondrion) [Batis maritima] AIC83334.1 orf148b
           (mitochondrion) [Batis maritima]
          Length = 148

 Score = 79.0 bits (193), Expect(2) = 7e-17
 Identities = 47/70 (67%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
 Frame = +3

Query: 3   RPSLKWNFHAGARTSMKVDLLQPARLFV-FHFLFTSPS*N*K*KALTELLTESQISLDAE 179
           RPSLKWNFHA ARTSMKVDL       V   F F+ PS + K  AL ELLTESQISLD E
Sbjct: 34  RPSLKWNFHAEARTSMKVDLFITTSAVVRLSFSFSKPSPSTK--ALAELLTESQISLDTE 91

Query: 180 NFLYVQVDQR 209
           NFL  QVDQR
Sbjct: 92  NFLCAQVDQR 101



 Score = 35.4 bits (80), Expect(2) = 7e-17
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = +1

Query: 298 LGHLSRERPPSLRPAVFYF 354
           LGH+ +ER PSLRPAVFYF
Sbjct: 130 LGHVYQERRPSLRPAVFYF 148


>NP_064047.1 orf169 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           YP_004222289.1 hypothetical protein BevumaM_p051
           (mitochondrion) [Beta vulgaris subsp. maritima]
           YP_004842203.1 hypothetical protein BemaM_p159
           (mitochondrion) [Beta macrocarpa] BAA99357.1 orf169
           (mitochondrion) [Beta vulgaris subsp. vulgaris]
           CBJ14109.1 hypothetical protein (mitochondrion) [Beta
           vulgaris subsp. maritima] CBJ17516.1 hypothetical
           protein (mitochondrion) [Beta vulgaris subsp. maritima]
           CBX25008.1 hypothetical protein (mitochondrion) [Beta
           macrocarpa] CBL52034.1 hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 169

 Score = 63.2 bits (152), Expect = 2e-09
 Identities = 61/155 (39%), Positives = 71/155 (45%), Gaps = 5/155 (3%)
 Frame = +2

Query: 2   SSFPEMELSCWSKN*HESRSI----TTSAVVRISFSFYKPFLELEIESTH*VTYGISNLS 169
           SSF EMELSCW      S  +    TTSAVV ISF   K  L  E   ++  +    N  
Sbjct: 28  SSFTEMELSCWF-GVRTSMKVDLLRTTSAVVHISFPSSKQALLGEHSLSYLRSLDADN-- 84

Query: 170 RRREFFICPGRSEVRLASPPPFSVWAPXXXXXXXXXXXXXXXXWAIFPERGRLLSGQQSS 349
                F+C   ++VRLAS PPFSV                      FP          S 
Sbjct: 85  -----FLC---AQVRLASSPPFSVLGNKETRNQKERREIGPC----FPREAAF-----SQ 127

Query: 350 TSSRL-LYSMTGFPSLFPGLCSLVYAPTQQVIIEK 451
            SSRL +   +   SLFPGLCS VYAPT +VIIEK
Sbjct: 128 ASSRLEVEDCSMRASLFPGLCSPVYAPTHKVIIEK 162


>CBJ23345.1 hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
          Length = 169

 Score = 63.2 bits (152), Expect = 2e-09
 Identities = 61/155 (39%), Positives = 71/155 (45%), Gaps = 5/155 (3%)
 Frame = +2

Query: 2   SSFPEMELSCWSKN*HESRSI----TTSAVVRISFSFYKPFLELEIESTH*VTYGISNLS 169
           SSF EMELSCW      S  +    TTSAVV ISF   K  L  E   ++  +    N  
Sbjct: 28  SSFTEMELSCWF-GVRTSMKVDLLRTTSAVVHISFPSSKQALLGEHSLSYLRSLDADN-- 84

Query: 170 RRREFFICPGRSEVRLASPPPFSVWAPXXXXXXXXXXXXXXXXWAIFPERGRLLSGQQSS 349
                F+C   ++VRLAS PPFSV                      FP          S 
Sbjct: 85  -----FLC---AQVRLASSPPFSVLGNKETRNQKERREIGPC----FPREAAF-----SQ 127

Query: 350 TSSRL-LYSMTGFPSLFPGLCSLVYAPTQQVIIEK 451
            SSRL +   +   SLFPGLCS VYAPT +VIIEK
Sbjct: 128 ASSRLEVEDCSMRASLFPGLCSPVYAPTHKVIIEK 162


>XP_016500820.1 PREDICTED: NADH-ubiquinone oxidoreductase chain 6-like [Nicotiana
           tabacum]
          Length = 223

 Score = 60.5 bits (145), Expect = 4e-08
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = -1

Query: 249 GAQTLKGGGEASRTSDRPGHIKNSRRRERFEIP 151
           G++ LKGGGE SRTS+RPGHI NSRRRERFEIP
Sbjct: 3   GSRRLKGGGEGSRTSNRPGHINNSRRRERFEIP 35


>XP_003612011.1 hypothetical protein MTR_5g020310 [Medicago truncatula] AES94969.1
           hypothetical protein MTR_5g020310 [Medicago truncatula]
          Length = 127

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 28/49 (57%), Positives = 31/49 (63%)
 Frame = +2

Query: 299 WAIFPERGRLLSGQQSSTSSRLLYSMTGFPSLFPGLCSLVYAPTQQVII 445
           WA+FPE GRLLSGQQSSTSSRLLY   G P +    CS    P+    I
Sbjct: 25  WAMFPEVGRLLSGQQSSTSSRLLYD--GLPCILGSACSSTLRPSNMPCI 71


>KXG21685.1 hypothetical protein SORBI_009G095600 [Sorghum bicolor]
          Length = 132

 Score = 52.8 bits (125), Expect = 7e-06
 Identities = 26/32 (81%), Positives = 26/32 (81%)
 Frame = +2

Query: 2   SSFPEMELSCWSKN*HESRSITTSAVVRISFS 97
           SSF EMEL CWSK  H SRSITTS VVRISFS
Sbjct: 28  SSFLEMELECWSKKTHSSRSITTSTVVRISFS 59


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