BLASTX nr result
ID: Phellodendron21_contig00030217
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00030217
(646 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ADJ18449.1 gag/pol protein, partial [Bryonia dioica] 97 2e-19
pir||B47758 retrovirus-related reverse transcriptase homolog - P... 83 2e-17
CAN69397.1 hypothetical protein VITISV_021035 [Vitis vinifera] 90 2e-17
CAN64055.1 hypothetical protein VITISV_044406 [Vitis vinifera] 86 5e-16
AMY96445.1 gag/pol protein [Momordica dioica] 84 3e-15
AAL36486.1 reverse transcriptase, partial [Setaria verticillata] 76 1e-14
AAL36466.1 reverse transcriptase, partial [Setaria italica] 76 1e-14
AAL36473.1 reverse transcriptase, partial [Setaria faberi] 76 1e-14
AAL36489.1 reverse transcriptase, partial [Setaria viridis var. ... 76 1e-14
ABB80659.1 reverse transcriptase, partial [Musa acuminata] 75 2e-14
ABB80652.1 reverse transcriptase, partial [Musa ABB Group] 75 2e-14
AAK55319.1 putative reverse transcriptase, partial [Oryza sativa] 75 2e-14
ADF45905.1 reverse transcriptase, partial [Eleocharis quinqueflora] 75 3e-14
BAB83561.1 reverse transcriptase, partial [Silene dioica] 74 6e-14
AGX45509.1 reverse transcriptase, partial [Prunus salicina] 74 7e-14
AAL36488.1 reverse transcriptase, partial [Setaria verticillata] 74 1e-13
KZV56006.1 hypothetical protein F511_12705 [Dorcoceras hygrometr... 77 2e-13
pir||T03665 reverse transcriptase homolog - rice copia-like retr... 73 2e-13
BAB83579.1 reverse transcriptase, partial [Silene conica] 73 2e-13
AEX61047.1 reverse transcriptase, partial [Chenopodium quinoa] A... 72 3e-13
>ADJ18449.1 gag/pol protein, partial [Bryonia dioica]
Length = 1292
Score = 96.7 bits (239), Expect = 2e-19
Identities = 48/81 (59%), Positives = 59/81 (72%)
Frame = -2
Query: 567 DESIYIVQQAGFVF*SQEQNIFKLYRFIYGLK*ASQSWNIILDTTIKSYSFEKNVDESSV 388
+ESIY+VQ GF+ QEQ + KL + IYGLK AS+SWNI DT IKSY FE+NVDE V
Sbjct: 927 EESIYMVQPEGFIAQDQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCV 986
Query: 387 YQRIIHKKVFFYILYVDDFCL 325
Y++I++ V F ILYVDD L
Sbjct: 987 YKKIVNSVVAFLILYVDDILL 1007
>pir||B47758 retrovirus-related reverse transcriptase homolog - Platanus
occidentalis retrotransposon copia-like (fragment)
AAA33850.1 reverse transcriptase, partial [Platanus
occidentalis]
Length = 88
Score = 83.2 bits (204), Expect = 2e-17
Identities = 40/78 (51%), Positives = 53/78 (67%)
Frame = -2
Query: 567 DESIYIVQQAGFVF*SQEQNIFKLYRFIYGLK*ASQSWNIILDTTIKSYSFEKNVDESSV 388
+E IY++Q GFV+ QE + KL R IYGLK AS+SWNI D IKS+ FE+N +E V
Sbjct: 10 NEEIYMLQPKGFVYPGQESKVCKLERSIYGLKQASRSWNIRFDQAIKSFGFEQNPEEPCV 69
Query: 387 YQRIIHKKVFFYILYVDD 334
Y+++ V F +LYVDD
Sbjct: 70 YKKVNENAVVFLVLYVDD 87
>CAN69397.1 hypothetical protein VITISV_021035 [Vitis vinifera]
Length = 668
Score = 90.1 bits (222), Expect = 2e-17
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = -2
Query: 567 DESIYIVQQAGFVF*SQEQNIFKLYRFIYGLK*ASQSWNIILDTTIKSYSFEKNVDESSV 388
+E+IY+VQ GFV QEQ + KL R IYGLK AS+SWNII + IKSY FE+N+ E V
Sbjct: 267 EETIYMVQPEGFVVKDQEQKVCKLQRSIYGLKQASRSWNIIFNEAIKSYGFEQNLGEPCV 326
Query: 387 YQRIIHKKVFFYILYVDDFCL 325
Y++I KV F +LYVDD L
Sbjct: 327 YKQIGGDKVVFLVLYVDDILL 347
>CAN64055.1 hypothetical protein VITISV_044406 [Vitis vinifera]
Length = 633
Score = 86.3 bits (212), Expect = 5e-16
Identities = 46/92 (50%), Positives = 60/92 (65%), Gaps = 5/92 (5%)
Frame = -2
Query: 567 DESIYIVQQAGFVF*SQEQNIFKLYRFIYGLK*ASQSWNIILDTTIKSYSFEKNVDESSV 388
DE IY+ Q GF+ QE + KL R IYGLK AS+SWN D TIK++ F++ DES V
Sbjct: 232 DECIYMKQXEGFIXNGQEHLLCKLNRSIYGLKQASRSWNTCFDQTIKTFGFDQCHDESCV 291
Query: 387 YQRIIHKKVFFYILYVDDF-----CLGLMTSV 307
Y++ KKV F +LYVDD C+G++TSV
Sbjct: 292 YKKWNGKKVVFLVLYVDDILLIGNCIGMLTSV 323
>AMY96445.1 gag/pol protein [Momordica dioica]
Length = 1313
Score = 84.3 bits (207), Expect = 3e-15
Identities = 45/81 (55%), Positives = 54/81 (66%)
Frame = -2
Query: 567 DESIYIVQQAGFVF*SQEQNIFKLYRFIYGLK*ASQSWNIILDTTIKSYSFEKNVDESSV 388
+ESIY++Q GFV QEQ KL IYGLK AS+SWNI D IK++ F +NVDES V
Sbjct: 943 EESIYMIQPEGFVAQDQEQKACKLQGSIYGLKQASRSWNIRFDEVIKAFGFIQNVDESCV 1002
Query: 387 YQRIIHKKVFFYILYVDDFCL 325
Y++I V F ILYVDD L
Sbjct: 1003 YKKISGSVVAFLILYVDDILL 1023
>AAL36486.1 reverse transcriptase, partial [Setaria verticillata]
Length = 92
Score = 76.3 bits (186), Expect = 1e-14
Identities = 37/77 (48%), Positives = 48/77 (62%)
Frame = -2
Query: 564 ESIYIVQQAGFVF*SQEQNIFKLYRFIYGLK*ASQSWNIILDTTIKSYSFEKNVDESSVY 385
E +Y++Q GFV + KL R IYGLK AS+SWNI D +K + F KN +ES VY
Sbjct: 15 EDVYMIQPEGFVNPKNAGKVCKLQRSIYGLKQASRSWNIRFDEVVKGFDFTKNEEESCVY 74
Query: 384 QRIIHKKVFFYILYVDD 334
+++ V F ILYVDD
Sbjct: 75 KKVSGSSVIFLILYVDD 91
>AAL36466.1 reverse transcriptase, partial [Setaria italica]
Length = 92
Score = 76.3 bits (186), Expect = 1e-14
Identities = 37/77 (48%), Positives = 48/77 (62%)
Frame = -2
Query: 564 ESIYIVQQAGFVF*SQEQNIFKLYRFIYGLK*ASQSWNIILDTTIKSYSFEKNVDESSVY 385
E +Y++Q GFV + KL R IYGLK AS+SWNI D +K + F KN +ES VY
Sbjct: 15 EDVYMIQLEGFVDPKNAGKVCKLQRSIYGLKQASRSWNICFDEVVKGFGFTKNKEESCVY 74
Query: 384 QRIIHKKVFFYILYVDD 334
+++ V F ILYVDD
Sbjct: 75 KKVSGSSVVFLILYVDD 91
>AAL36473.1 reverse transcriptase, partial [Setaria faberi]
Length = 92
Score = 75.9 bits (185), Expect = 1e-14
Identities = 37/77 (48%), Positives = 48/77 (62%)
Frame = -2
Query: 564 ESIYIVQQAGFVF*SQEQNIFKLYRFIYGLK*ASQSWNIILDTTIKSYSFEKNVDESSVY 385
E +Y++Q GFV + KL R IYGLK AS+SWNI D +K + F KN +ES VY
Sbjct: 15 EDVYMIQPEGFVDPKNAGKVCKLQRSIYGLKQASRSWNIRFDEVVKGFDFTKNEEESCVY 74
Query: 384 QRIIHKKVFFYILYVDD 334
+++ V F ILYVDD
Sbjct: 75 KKVSGSSVVFLILYVDD 91
>AAL36489.1 reverse transcriptase, partial [Setaria viridis var. minor]
Length = 92
Score = 75.9 bits (185), Expect = 1e-14
Identities = 37/77 (48%), Positives = 48/77 (62%)
Frame = -2
Query: 564 ESIYIVQQAGFVF*SQEQNIFKLYRFIYGLK*ASQSWNIILDTTIKSYSFEKNVDESSVY 385
E +Y++Q GFV + KL R IYGLK AS+SWNI D +K + F KN +ES VY
Sbjct: 15 EDVYMIQPEGFVDPKNAGKVCKLQRSIYGLKQASRSWNIHFDEVVKGFDFTKNEEESCVY 74
Query: 384 QRIIHKKVFFYILYVDD 334
+++ V F ILYVDD
Sbjct: 75 KKVSGSSVVFLILYVDD 91
>ABB80659.1 reverse transcriptase, partial [Musa acuminata]
Length = 90
Score = 75.5 bits (184), Expect = 2e-14
Identities = 36/78 (46%), Positives = 50/78 (64%)
Frame = -2
Query: 567 DESIYIVQQAGFVF*SQEQNIFKLYRFIYGLK*ASQSWNIILDTTIKSYSFEKNVDESSV 388
+E +Y++Q GFV + + +L R IYGLK AS+SWNI D I+SY F KN DE V
Sbjct: 9 EEEVYMMQHEGFVSKNCPDKVCRLLRSIYGLKQASRSWNIRFDEAIRSYDFVKNEDEPCV 68
Query: 387 YQRIIHKKVFFYILYVDD 334
Y+++ + F +LYVDD
Sbjct: 69 YRKVSGSAITFLVLYVDD 86
>ABB80652.1 reverse transcriptase, partial [Musa ABB Group]
Length = 90
Score = 75.5 bits (184), Expect = 2e-14
Identities = 36/77 (46%), Positives = 50/77 (64%)
Frame = -2
Query: 564 ESIYIVQQAGFVF*SQEQNIFKLYRFIYGLK*ASQSWNIILDTTIKSYSFEKNVDESSVY 385
E +Y++Q GFV + + + +L R IYGLK ASQSWNI D I+SY F KN D+ VY
Sbjct: 10 EEVYMMQPKGFVSKNCQDKVCRLLRSIYGLKQASQSWNIRFDEAIRSYDFVKNEDKPCVY 69
Query: 384 QRIIHKKVFFYILYVDD 334
+++ + F +LYVDD
Sbjct: 70 KKVSGSAITFLVLYVDD 86
>AAK55319.1 putative reverse transcriptase, partial [Oryza sativa]
Length = 94
Score = 75.5 bits (184), Expect = 2e-14
Identities = 38/78 (48%), Positives = 50/78 (64%)
Frame = -2
Query: 567 DESIYIVQQAGFVF*SQEQNIFKLYRFIYGLK*ASQSWNIILDTTIKSYSFEKNVDESSV 388
DE +Y+ Q GFV +NI KL + IYGLK AS+SWNI LD +K+ F KN +E V
Sbjct: 14 DEDVYMAQPKGFVDPQSAKNICKLQKSIYGLKQASRSWNIRLDEVVKTLGFVKNEEEPCV 73
Query: 387 YQRIIHKKVFFYILYVDD 334
Y++I + F +LYVDD
Sbjct: 74 YKKISGSALVFLMLYVDD 91
>ADF45905.1 reverse transcriptase, partial [Eleocharis quinqueflora]
Length = 87
Score = 75.1 bits (183), Expect = 3e-14
Identities = 36/78 (46%), Positives = 49/78 (62%)
Frame = -2
Query: 567 DESIYIVQQAGFVF*SQEQNIFKLYRFIYGLK*ASQSWNIILDTTIKSYSFEKNVDESSV 388
DE +Y++Q GFV +FKL R IYGLK AS+SWN+ D IKS+ F N E+ +
Sbjct: 9 DEELYMMQPEGFVDPKDANKVFKLQRSIYGLKQASRSWNLRFDQVIKSFGFIPNCYEACI 68
Query: 387 YQRIIHKKVFFYILYVDD 334
Y+++ V F +LYVDD
Sbjct: 69 YKKVSGSSVTFLVLYVDD 86
>BAB83561.1 reverse transcriptase, partial [Silene dioica]
Length = 92
Score = 74.3 bits (181), Expect = 6e-14
Identities = 37/78 (47%), Positives = 48/78 (61%)
Frame = -2
Query: 567 DESIYIVQQAGFVF*SQEQNIFKLYRFIYGLK*ASQSWNIILDTTIKSYSFEKNVDESSV 388
+E +Y+ Q GFV S + + KL + IYGLK AS+SWN D IK Y F KNV+E +
Sbjct: 14 EEEVYMTQPEGFVDTSNPKKVCKLKKSIYGLKQASRSWNHRFDHVIKKYGFTKNVEEPCL 73
Query: 387 YQRIIHKKVFFYILYVDD 334
Y + KV F +LYVDD
Sbjct: 74 YMKFSGSKVAFLVLYVDD 91
>AGX45509.1 reverse transcriptase, partial [Prunus salicina]
Length = 88
Score = 73.9 bits (180), Expect = 7e-14
Identities = 35/77 (45%), Positives = 49/77 (63%)
Frame = -2
Query: 564 ESIYIVQQAGFVF*SQEQNIFKLYRFIYGLK*ASQSWNIILDTTIKSYSFEKNVDESSVY 385
E +Y+ Q GF+ ++ + KL R IYGLK AS+SWN+ D IKS+ F +N DE VY
Sbjct: 10 EELYMDQPEGFISKTESHKVCKLQRSIYGLKQASRSWNLRFDEAIKSFDFSQNGDEPCVY 69
Query: 384 QRIIHKKVFFYILYVDD 334
+++ V F +LYVDD
Sbjct: 70 KKVSGSAVVFLVLYVDD 86
>AAL36488.1 reverse transcriptase, partial [Setaria verticillata]
Length = 92
Score = 73.6 bits (179), Expect = 1e-13
Identities = 35/78 (44%), Positives = 50/78 (64%)
Frame = -2
Query: 567 DESIYIVQQAGFVF*SQEQNIFKLYRFIYGLK*ASQSWNIILDTTIKSYSFEKNVDESSV 388
DE +Y++Q GFV + + + KL + IYGLK AS+SWNI D +K + F +N +E+ V
Sbjct: 14 DEDVYMIQPEGFVDPTNAKKLCKLQKSIYGLKQASRSWNIHFDEVVKGFGFRQNEEEACV 73
Query: 387 YQRIIHKKVFFYILYVDD 334
Y++ V F ILYVDD
Sbjct: 74 YKKESGSSVVFLILYVDD 91
>KZV56006.1 hypothetical protein F511_12705 [Dorcoceras hygrometricum]
Length = 247
Score = 77.0 bits (188), Expect = 2e-13
Identities = 38/80 (47%), Positives = 49/80 (61%)
Frame = -2
Query: 564 ESIYIVQQAGFVF*SQEQNIFKLYRFIYGLK*ASQSWNIILDTTIKSYSFEKNVDESSVY 385
E IY+ Q GF E + KL+R IY LK AS+SWN+ D TIK + F KN DE VY
Sbjct: 35 EEIYMTQPEGFTSVGSEHKVCKLHRSIYVLKQASRSWNLRFDETIKEFDFIKNPDEPYVY 94
Query: 384 QRIIHKKVFFYILYVDDFCL 325
++++ V F +LYVDD L
Sbjct: 95 KKVVKNAVTFLVLYVDDILL 114
>pir||T03665 reverse transcriptase homolog - rice copia-like retrotransposon
Rtr23 (fragment) [Oryza sativa] CAA99754.1 reverse
transcriptase, partial [Oryza sativa Japonica Group]
Length = 92
Score = 73.2 bits (178), Expect = 2e-13
Identities = 37/78 (47%), Positives = 49/78 (62%)
Frame = -2
Query: 567 DESIYIVQQAGFVF*SQEQNIFKLYRFIYGLK*ASQSWNIILDTTIKSYSFEKNVDESSV 388
DE +Y+ Q GFV + I KL + IYGLK AS+SWNI D +K+ F KN +E V
Sbjct: 14 DEDVYMTQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDKVVKALGFVKNEEEPCV 73
Query: 387 YQRIIHKKVFFYILYVDD 334
Y++I ++ F ILYVDD
Sbjct: 74 YKKISLSELVFLILYVDD 91
>BAB83579.1 reverse transcriptase, partial [Silene conica]
Length = 92
Score = 72.8 bits (177), Expect = 2e-13
Identities = 36/78 (46%), Positives = 49/78 (62%)
Frame = -2
Query: 567 DESIYIVQQAGFVF*SQEQNIFKLYRFIYGLK*ASQSWNIILDTTIKSYSFEKNVDESSV 388
+E +Y+ Q GFV S + + KL + IYGLK AS+SWN D IK YSF ++V+E +
Sbjct: 14 EEEVYMTQPEGFVDTSNPKRVCKLKKSIYGLKQASRSWNHRFDHVIKQYSFTRSVEEPCL 73
Query: 387 YQRIIHKKVFFYILYVDD 334
Y + KV F +LYVDD
Sbjct: 74 YMKFSGSKVAFLVLYVDD 91
>AEX61047.1 reverse transcriptase, partial [Chenopodium quinoa] AEX61048.1
reverse transcriptase, partial [Chenopodium quinoa]
Length = 88
Score = 72.4 bits (176), Expect = 3e-13
Identities = 35/78 (44%), Positives = 50/78 (64%)
Frame = -2
Query: 567 DESIYIVQQAGFVF*SQEQNIFKLYRFIYGLK*ASQSWNIILDTTIKSYSFEKNVDESSV 388
++++Y+ Q GFV S + KL + IYGLK AS+SWN+ D I +SF KN DES V
Sbjct: 9 EKTVYMTQPEGFVNPSNVGKVCKLKKSIYGLKQASRSWNLRFDEAISKFSFIKNPDESCV 68
Query: 387 YQRIIHKKVFFYILYVDD 334
Y+++ + F +LYVDD
Sbjct: 69 YKKVSGSDIAFLVLYVDD 86