BLASTX nr result

ID: Phellodendron21_contig00029386 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00029386
         (291 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_015386944.1 PREDICTED: mediator of RNA polymerase II transcri...    75   1e-13
XP_006482022.2 PREDICTED: mediator of RNA polymerase II transcri...    75   1e-13
XP_006430490.1 hypothetical protein CICLE_v10013763mg, partial [...    64   8e-10

>XP_015386944.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like isoform X2 [Citrus sinensis]
          Length = 1034

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 33/47 (70%), Positives = 38/47 (80%)
 Frame = -1

Query: 141 EQANMEGLHDQKYQKFLSMKKAYLPWLTYLYNKLREKYQKPPISEIH 1
           EQANM   HDQ YQKF +M+K YLPWLT++YNKL EK QKPPI EI+
Sbjct: 359 EQANMAEFHDQMYQKFQAMRKEYLPWLTHVYNKLNEKCQKPPIPEIY 405


>XP_006482022.2 PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like isoform X1 [Citrus sinensis]
          Length = 1042

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 33/47 (70%), Positives = 38/47 (80%)
 Frame = -1

Query: 141 EQANMEGLHDQKYQKFLSMKKAYLPWLTYLYNKLREKYQKPPISEIH 1
           EQANM   HDQ YQKF +M+K YLPWLT++YNKL EK QKPPI EI+
Sbjct: 367 EQANMAEFHDQMYQKFQAMRKEYLPWLTHVYNKLNEKCQKPPIPEIY 413


>XP_006430490.1 hypothetical protein CICLE_v10013763mg, partial [Citrus clementina]
           ESR43730.1 hypothetical protein CICLE_v10013763mg,
           partial [Citrus clementina]
          Length = 407

 Score = 63.9 bits (154), Expect = 8e-10
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = -1

Query: 141 EQANMEGLHDQKYQKFLSMKKAYLPWLTYLYNKLREKYQK 22
           EQANM   HDQ YQKF +M+K YLPWLT++YNKL EK QK
Sbjct: 368 EQANMAEFHDQMYQKFQAMRKEYLPWLTHVYNKLNEKCQK 407


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