BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00027311
         (1246 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KDO52429.1 hypothetical protein CISIN_1g001050mg [Citrus sinensis]    767   0.0  
XP_006442883.1 hypothetical protein CICLE_v10018562mg [Citrus cl...   767   0.0  
EOY29337.1 DNA-directed RNA polymerase isoform 2 [Theobroma cacao]    696   0.0  
EOY29338.1 DNA-directed RNA polymerase isoform 3 [Theobroma cacao]    696   0.0  
EOY29336.1 DNA-directed RNA polymerase isoform 1 [Theobroma cacao]    696   0.0  
XP_007011717.2 PREDICTED: DNA-directed RNA polymerases IV and V ...   696   0.0  
XP_012076429.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   696   0.0  
OMO90703.1 hypothetical protein COLO4_18947 [Corchorus olitorius]     694   0.0  
XP_011036682.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   692   0.0  
GAV84304.1 RNA_pol_Rpb2_6 domain-containing protein/RNA_pol_Rpb2...   691   0.0  
OMO69360.1 hypothetical protein COLO4_29107 [Corchorus olitorius]     684   0.0  
OAY53599.1 hypothetical protein MANES_03G009000 [Manihot esculenta]   684   0.0  
OMO57303.1 hypothetical protein COLO4_35449 [Corchorus olitorius]     683   0.0  
OMO61577.1 hypothetical protein CCACVL1_23410 [Corchorus capsula...   691   0.0  
XP_002283296.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   682   0.0  
XP_018839587.1 PREDICTED: DNA-directed RNA polymerase D subunit ...   681   0.0  
KJB07693.1 hypothetical protein B456_001G037900 [Gossypium raimo...   671   0.0  
XP_002515428.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   674   0.0  
XP_002324332.2 DNA-directed RNA polymerase family protein [Popul...   673   0.0  
XP_017608025.1 PREDICTED: DNA-directed RNA polymerase D subunit ...   672   0.0  

>KDO52429.1 hypothetical protein CISIN_1g001050mg [Citrus sinensis]
          Length = 1173

 Score =  767 bits (1981), Expect = 0.0
 Identities = 372/415 (89%), Positives = 394/415 (94%)
 Frame = +2

Query: 2    VRPIEYYLDASIVTNGLSRAFSTGAWSHPFKRTERISGVVANLGRANPLQALVDLRRTRQ 181
            VRPIEYYLDASI+TNGLSRAFSTGAWSHPFKRTERISG+VANLGRANPLQ LVDLRRTRQ
Sbjct: 425  VRPIEYYLDASILTNGLSRAFSTGAWSHPFKRTERISGIVANLGRANPLQTLVDLRRTRQ 484

Query: 182  QVRYTGKVGDARYPHPSHWGKICFLSTPDGEKCGLVKNMGVTGLVSTNILEPILGQLFDS 361
            QV+YTGKVGDARYPHPSHWGKICFLSTPDGE CGLVKN+GVTGLVST+ILEPI  QLF+S
Sbjct: 485  QVQYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNLGVTGLVSTSILEPIFEQLFNS 544

Query: 362  GMEKLVDDASTSLEGKYKVFVNGDWVGVCKDSLSFVAELRSKRRRQELPNQVEIKRDEQQ 541
            GMEKL DDAS SL GK+KVFV+GDW+GVCKDSLSFV+ELR KRRR+ELP QVEIKRDE Q
Sbjct: 545  GMEKLADDASYSLGGKFKVFVDGDWIGVCKDSLSFVSELRRKRRRKELPTQVEIKRDELQ 604

Query: 542  CEVRIFLDAGRILRPLLVVENLGRIKSSTGKNFTFRSLLDSGIIELVGTEEEEDCCTAWG 721
             EVRIF+DAGRILRPLLVVEN+G+IKS  GKN+TF++LLD GIIELVGTEEEEDCCTAWG
Sbjct: 605  SEVRIFMDAGRILRPLLVVENMGKIKSLEGKNYTFQALLDHGIIELVGTEEEEDCCTAWG 664

Query: 722  IKYLLKDNEDDKPVKFTHCELDMSFLLGLSCGIIPFANHDHARRILYQSQKHSSQAIGFP 901
            IKYLLKD ED KP+KFTHCELDMSFLLGLSCGIIPFANHDHARR+LYQSQKHSSQAIGFP
Sbjct: 665  IKYLLKDIEDKKPIKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFP 724

Query: 902  TTNPNIRVDTLSHQLFYPQRPLFRTMTSDCLGTPGYGHNGILPRPELYNGQNAIVAVNVH 1081
            TTNP+IRVDTLSHQLFYPQRPLFRTM SDCLG PGYGHN ILPRPELYNGQNAIVAVNVH
Sbjct: 725  TTNPSIRVDTLSHQLFYPQRPLFRTMISDCLGKPGYGHNHILPRPELYNGQNAIVAVNVH 784

Query: 1082 LGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNEELQVKRRPSDDKVNFGKIQ 1246
            LGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDN+E+QVKRR SDD VNFGKIQ
Sbjct: 785  LGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKEMQVKRRSSDDMVNFGKIQ 839


>XP_006442883.1 hypothetical protein CICLE_v10018562mg [Citrus clementina]
            XP_006478802.1 PREDICTED: DNA-directed RNA polymerases IV
            and V subunit 2-like [Citrus sinensis] ESR56123.1
            hypothetical protein CICLE_v10018562mg [Citrus
            clementina]
          Length = 1198

 Score =  767 bits (1981), Expect = 0.0
 Identities = 372/415 (89%), Positives = 394/415 (94%)
 Frame = +2

Query: 2    VRPIEYYLDASIVTNGLSRAFSTGAWSHPFKRTERISGVVANLGRANPLQALVDLRRTRQ 181
            VRPIEYYLDASI+TNGLSRAFSTGAWSHPFKRTERISG+VANLGRANPLQ LVDLRRTRQ
Sbjct: 450  VRPIEYYLDASILTNGLSRAFSTGAWSHPFKRTERISGIVANLGRANPLQTLVDLRRTRQ 509

Query: 182  QVRYTGKVGDARYPHPSHWGKICFLSTPDGEKCGLVKNMGVTGLVSTNILEPILGQLFDS 361
            QV+YTGKVGDARYPHPSHWGKICFLSTPDGE CGLVKN+GVTGLVST+ILEPI  QLF+S
Sbjct: 510  QVQYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNLGVTGLVSTSILEPIFEQLFNS 569

Query: 362  GMEKLVDDASTSLEGKYKVFVNGDWVGVCKDSLSFVAELRSKRRRQELPNQVEIKRDEQQ 541
            GMEKL DDAS SL GK+KVFV+GDW+GVCKDSLSFV+ELR KRRR+ELP QVEIKRDE Q
Sbjct: 570  GMEKLADDASYSLGGKFKVFVDGDWIGVCKDSLSFVSELRRKRRRKELPTQVEIKRDELQ 629

Query: 542  CEVRIFLDAGRILRPLLVVENLGRIKSSTGKNFTFRSLLDSGIIELVGTEEEEDCCTAWG 721
             EVRIF+DAGRILRPLLVVEN+G+IKS  GKN+TF++LLD GIIELVGTEEEEDCCTAWG
Sbjct: 630  SEVRIFMDAGRILRPLLVVENMGKIKSLEGKNYTFQALLDHGIIELVGTEEEEDCCTAWG 689

Query: 722  IKYLLKDNEDDKPVKFTHCELDMSFLLGLSCGIIPFANHDHARRILYQSQKHSSQAIGFP 901
            IKYLLKD ED KP+KFTHCELDMSFLLGLSCGIIPFANHDHARR+LYQSQKHSSQAIGFP
Sbjct: 690  IKYLLKDIEDKKPIKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFP 749

Query: 902  TTNPNIRVDTLSHQLFYPQRPLFRTMTSDCLGTPGYGHNGILPRPELYNGQNAIVAVNVH 1081
            TTNP+IRVDTLSHQLFYPQRPLFRTM SDCLG PGYGHN ILPRPELYNGQNAIVAVNVH
Sbjct: 750  TTNPSIRVDTLSHQLFYPQRPLFRTMISDCLGKPGYGHNHILPRPELYNGQNAIVAVNVH 809

Query: 1082 LGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNEELQVKRRPSDDKVNFGKIQ 1246
            LGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDN+E+QVKRR SDD VNFGKIQ
Sbjct: 810  LGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKEMQVKRRSSDDMVNFGKIQ 864


>EOY29337.1 DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
          Length = 961

 Score =  696 bits (1797), Expect = 0.0
 Identities = 337/417 (80%), Positives = 378/417 (90%), Gaps = 2/417 (0%)
 Frame = +2

Query: 2    VRPIEYYLDASIVTNGLSRAFSTGAWSHPFKRTERISGVVANLGRANPLQALVDLRRTRQ 181
            VRPIE+YLDASIVTNGLSRAFSTGAWSHP+KR ERISGVVANLGRANPLQ +VDLR+TRQ
Sbjct: 213  VRPIEHYLDASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRQ 272

Query: 182  QVRYTGKVGDARYPHPSHWGKICFLSTPDGEKCGLVKNMGVTGLVSTNILEPILGQLFDS 361
            QV+YTGKVGDARYPHPSHWGK+CFLSTPDGE CGLVKN+  TGLVSTNI+E I+ +LFDS
Sbjct: 273  QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNIMESIVDKLFDS 332

Query: 362  GMEKLVDDASTSLEGKYKVFVNGDWVGVCKDSLSFVAELRSKRRRQELPNQVEIKRDEQQ 541
            GME+LV+D  +SL+GK KVF+NG+WVGVC+DSLSF AE+R KRR +E P+QVEIKRDE +
Sbjct: 333  GMEELVNDTCSSLDGKDKVFLNGEWVGVCEDSLSFAAEVRRKRRSKEFPHQVEIKRDEHK 392

Query: 542  CEVRIFLDAGRILRPLLVVENLGRIKSSTGKNFTFRSLLDSGIIELVGTEEEEDCCTAWG 721
             EVRIF D GRILRPLLVV+NL RIK+  G+N+TF++LL+ GIIELVGTEEEEDC TAW 
Sbjct: 393  GEVRIFSDGGRILRPLLVVDNLNRIKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAWS 452

Query: 722  IKYLLKDNEDDKPVKFTHCELDMSFLLGLSCGIIPFANHDHARRILYQSQKHSSQAIGFP 901
            IKYLL D E  +PVK+THCELDMSFLLGLSCGIIPFANHDHARR+LYQ+QKHS QAIGF 
Sbjct: 453  IKYLLTDVEGKQPVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFS 512

Query: 902  TTNPNIRVDTLSHQLFYPQRPLFRTMTSDCLGTPGY--GHNGILPRPELYNGQNAIVAVN 1075
            TTNPNIRVDTLSHQL+YPQRPLFRTMTSDCLG  G+  G  G+LP+PELYNGQNAIVAVN
Sbjct: 513  TTNPNIRVDTLSHQLYYPQRPLFRTMTSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAVN 572

Query: 1076 VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNEELQVKRRPSDDKVNFGKIQ 1246
            VHLGYNQEDSLVMNR+SLERGMFRSEH+RSYKAEVDN+E+Q KRR S+D VNFGKIQ
Sbjct: 573  VHLGYNQEDSLVMNRSSLERGMFRSEHVRSYKAEVDNKEIQDKRRKSEDIVNFGKIQ 629


>EOY29338.1 DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
          Length = 1073

 Score =  696 bits (1797), Expect = 0.0
 Identities = 337/417 (80%), Positives = 378/417 (90%), Gaps = 2/417 (0%)
 Frame = +2

Query: 2    VRPIEYYLDASIVTNGLSRAFSTGAWSHPFKRTERISGVVANLGRANPLQALVDLRRTRQ 181
            VRPIE+YLDASIVTNGLSRAFSTGAWSHP+KR ERISGVVANLGRANPLQ +VDLR+TRQ
Sbjct: 440  VRPIEHYLDASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRQ 499

Query: 182  QVRYTGKVGDARYPHPSHWGKICFLSTPDGEKCGLVKNMGVTGLVSTNILEPILGQLFDS 361
            QV+YTGKVGDARYPHPSHWGK+CFLSTPDGE CGLVKN+  TGLVSTNI+E I+ +LFDS
Sbjct: 500  QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNIMESIVDKLFDS 559

Query: 362  GMEKLVDDASTSLEGKYKVFVNGDWVGVCKDSLSFVAELRSKRRRQELPNQVEIKRDEQQ 541
            GME+LV+D  +SL+GK KVF+NG+WVGVC+DSLSF AE+R KRR +E P+QVEIKRDE +
Sbjct: 560  GMEELVNDTCSSLDGKDKVFLNGEWVGVCEDSLSFAAEVRRKRRSKEFPHQVEIKRDEHK 619

Query: 542  CEVRIFLDAGRILRPLLVVENLGRIKSSTGKNFTFRSLLDSGIIELVGTEEEEDCCTAWG 721
             EVRIF D GRILRPLLVV+NL RIK+  G+N+TF++LL+ GIIELVGTEEEEDC TAW 
Sbjct: 620  GEVRIFSDGGRILRPLLVVDNLNRIKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAWS 679

Query: 722  IKYLLKDNEDDKPVKFTHCELDMSFLLGLSCGIIPFANHDHARRILYQSQKHSSQAIGFP 901
            IKYLL D E  +PVK+THCELDMSFLLGLSCGIIPFANHDHARR+LYQ+QKHS QAIGF 
Sbjct: 680  IKYLLTDVEGKQPVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFS 739

Query: 902  TTNPNIRVDTLSHQLFYPQRPLFRTMTSDCLGTPGY--GHNGILPRPELYNGQNAIVAVN 1075
            TTNPNIRVDTLSHQL+YPQRPLFRTMTSDCLG  G+  G  G+LP+PELYNGQNAIVAVN
Sbjct: 740  TTNPNIRVDTLSHQLYYPQRPLFRTMTSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAVN 799

Query: 1076 VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNEELQVKRRPSDDKVNFGKIQ 1246
            VHLGYNQEDSLVMNR+SLERGMFRSEH+RSYKAEVDN+E+Q KRR S+D VNFGKIQ
Sbjct: 800  VHLGYNQEDSLVMNRSSLERGMFRSEHVRSYKAEVDNKEIQDKRRKSEDIVNFGKIQ 856


>EOY29336.1 DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
          Length = 1184

 Score =  696 bits (1797), Expect = 0.0
 Identities = 337/417 (80%), Positives = 378/417 (90%), Gaps = 2/417 (0%)
 Frame = +2

Query: 2    VRPIEYYLDASIVTNGLSRAFSTGAWSHPFKRTERISGVVANLGRANPLQALVDLRRTRQ 181
            VRPIE+YLDASIVTNGLSRAFSTGAWSHP+KR ERISGVVANLGRANPLQ +VDLR+TRQ
Sbjct: 440  VRPIEHYLDASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRQ 499

Query: 182  QVRYTGKVGDARYPHPSHWGKICFLSTPDGEKCGLVKNMGVTGLVSTNILEPILGQLFDS 361
            QV+YTGKVGDARYPHPSHWGK+CFLSTPDGE CGLVKN+  TGLVSTNI+E I+ +LFDS
Sbjct: 500  QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNIMESIVDKLFDS 559

Query: 362  GMEKLVDDASTSLEGKYKVFVNGDWVGVCKDSLSFVAELRSKRRRQELPNQVEIKRDEQQ 541
            GME+LV+D  +SL+GK KVF+NG+WVGVC+DSLSF AE+R KRR +E P+QVEIKRDE +
Sbjct: 560  GMEELVNDTCSSLDGKDKVFLNGEWVGVCEDSLSFAAEVRRKRRSKEFPHQVEIKRDEHK 619

Query: 542  CEVRIFLDAGRILRPLLVVENLGRIKSSTGKNFTFRSLLDSGIIELVGTEEEEDCCTAWG 721
             EVRIF D GRILRPLLVV+NL RIK+  G+N+TF++LL+ GIIELVGTEEEEDC TAW 
Sbjct: 620  GEVRIFSDGGRILRPLLVVDNLNRIKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAWS 679

Query: 722  IKYLLKDNEDDKPVKFTHCELDMSFLLGLSCGIIPFANHDHARRILYQSQKHSSQAIGFP 901
            IKYLL D E  +PVK+THCELDMSFLLGLSCGIIPFANHDHARR+LYQ+QKHS QAIGF 
Sbjct: 680  IKYLLTDVEGKQPVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFS 739

Query: 902  TTNPNIRVDTLSHQLFYPQRPLFRTMTSDCLGTPGY--GHNGILPRPELYNGQNAIVAVN 1075
            TTNPNIRVDTLSHQL+YPQRPLFRTMTSDCLG  G+  G  G+LP+PELYNGQNAIVAVN
Sbjct: 740  TTNPNIRVDTLSHQLYYPQRPLFRTMTSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAVN 799

Query: 1076 VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNEELQVKRRPSDDKVNFGKIQ 1246
            VHLGYNQEDSLVMNR+SLERGMFRSEH+RSYKAEVDN+E+Q KRR S+D VNFGKIQ
Sbjct: 800  VHLGYNQEDSLVMNRSSLERGMFRSEHVRSYKAEVDNKEIQDKRRKSEDIVNFGKIQ 856


>XP_007011717.2 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Theobroma
            cacao]
          Length = 1184

 Score =  696 bits (1795), Expect = 0.0
 Identities = 337/417 (80%), Positives = 377/417 (90%), Gaps = 2/417 (0%)
 Frame = +2

Query: 2    VRPIEYYLDASIVTNGLSRAFSTGAWSHPFKRTERISGVVANLGRANPLQALVDLRRTRQ 181
            VRPIE+YLDASIVTNGLSRAFSTGAWSHP+KR ERISGVVANLGRANPLQ +VDLR+TRQ
Sbjct: 440  VRPIEHYLDASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRQ 499

Query: 182  QVRYTGKVGDARYPHPSHWGKICFLSTPDGEKCGLVKNMGVTGLVSTNILEPILGQLFDS 361
            QV+YTGKVGDARYPHPSHWGK+CFLSTPDGE CGLVKN+  TGLVSTNI+E I+ +LFDS
Sbjct: 500  QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNIMESIVDKLFDS 559

Query: 362  GMEKLVDDASTSLEGKYKVFVNGDWVGVCKDSLSFVAELRSKRRRQELPNQVEIKRDEQQ 541
            GME+LV+D  +SL+GK KVF+NG+WVGVC+DSLSF AE+R KRR +E P+QVEIKRDE +
Sbjct: 560  GMEELVNDTCSSLDGKDKVFLNGEWVGVCEDSLSFAAEVRRKRRSKEFPHQVEIKRDEHK 619

Query: 542  CEVRIFLDAGRILRPLLVVENLGRIKSSTGKNFTFRSLLDSGIIELVGTEEEEDCCTAWG 721
             EVRIF D GRILRPLLVV+NL R K+  G+N+TF++LL+ GIIELVGTEEEEDC TAW 
Sbjct: 620  GEVRIFSDGGRILRPLLVVDNLNRTKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAWS 679

Query: 722  IKYLLKDNEDDKPVKFTHCELDMSFLLGLSCGIIPFANHDHARRILYQSQKHSSQAIGFP 901
            IKYLL D E  +PVK+THCELDMSFLLGLSCGIIPFANHDHARR+LYQ+QKHS QAIGF 
Sbjct: 680  IKYLLTDVEGKQPVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFS 739

Query: 902  TTNPNIRVDTLSHQLFYPQRPLFRTMTSDCLGTPGY--GHNGILPRPELYNGQNAIVAVN 1075
            TTNPNIRVDTLSHQL+YPQRPLFRTMTSDCLG  G+  G  G+LP+PELYNGQNAIVAVN
Sbjct: 740  TTNPNIRVDTLSHQLYYPQRPLFRTMTSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAVN 799

Query: 1076 VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNEELQVKRRPSDDKVNFGKIQ 1246
            VHLGYNQEDSLVMNRASLERGMFRSEH+RSYKAEVDN+E+Q KRR S+D VNFGKIQ
Sbjct: 800  VHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEIQDKRRKSEDIVNFGKIQ 856


>XP_012076429.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Jatropha curcas] XP_012076430.1 PREDICTED: DNA-directed
            RNA polymerases IV and V subunit 2-like [Jatropha curcas]
            KDP33515.1 hypothetical protein JCGZ_07086 [Jatropha
            curcas]
          Length = 1209

 Score =  696 bits (1796), Expect = 0.0
 Identities = 336/417 (80%), Positives = 375/417 (89%), Gaps = 2/417 (0%)
 Frame = +2

Query: 2    VRPIEYYLDASIVTNGLSRAFSTGAWSHPFKRTERISGVVANLGRANPLQALVDLRRTRQ 181
            VRPIE+YLDASIVTNGLSRAFSTGAWSHPFKR ERISGVVANLGR NPLQ +VDLR+TRQ
Sbjct: 465  VRPIEHYLDASIVTNGLSRAFSTGAWSHPFKRMERISGVVANLGRTNPLQTMVDLRKTRQ 524

Query: 182  QVRYTGKVGDARYPHPSHWGKICFLSTPDGEKCGLVKNMGVTGLVSTNILEPILGQLFDS 361
            QV+YTGKVGDARYPHPSHWG++CFLSTPDGE CGLVKN+ +TGLVST ILEP++  LFD 
Sbjct: 525  QVQYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNLAITGLVSTEILEPLIDILFDC 584

Query: 362  GMEKLVDDASTSLEGKYKVFVNGDWVGVCKDSLSFVAELRSKRRRQELPNQVEIKRDEQQ 541
            GM+KLVDD  T L+ KYKVF+NG+WVGVC+DS  FVAELR  RRR++LP QVEIKRDEQQ
Sbjct: 585  GMDKLVDDTHTKLDEKYKVFLNGEWVGVCEDSNLFVAELRRLRRRKKLPRQVEIKRDEQQ 644

Query: 542  CEVRIFLDAGRILRPLLVVENLGRIKSSTGKNFTFRSLLDSGIIELVGTEEEEDCCTAWG 721
             EVRIF DAGRILRPLLVVENL +IK+  G N+TF+SLLD GIIE +GTEEEEDC TAWG
Sbjct: 645  KEVRIFADAGRILRPLLVVENLHKIKAFKGGNYTFQSLLDKGIIEFIGTEEEEDCSTAWG 704

Query: 722  IKYLLKDNEDDKPVKFTHCELDMSFLLGLSCGIIPFANHDHARRILYQSQKHSSQAIGFP 901
            IK+L+   +  +P+K+THCELDMSFLLGLSCGIIPFANHDHARR+LYQ+QKHS QAIGFP
Sbjct: 705  IKFLVAGVDKKQPLKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFP 764

Query: 902  TTNPNIRVDTLSHQLFYPQRPLFRTMTSDCLGTPGY--GHNGILPRPELYNGQNAIVAVN 1075
            TTNPNIRVDTLSHQL YPQRPLFRT+T+DCLG PGY  GH+G+LP+PEL+NGQNAIVAVN
Sbjct: 765  TTNPNIRVDTLSHQLHYPQRPLFRTVTADCLGKPGYARGHHGMLPKPELFNGQNAIVAVN 824

Query: 1076 VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNEELQVKRRPSDDKVNFGKIQ 1246
            VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKA+VDN+EL  KRR  +D VNFGKIQ
Sbjct: 825  VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKELLDKRRKFEDTVNFGKIQ 881


>OMO90703.1 hypothetical protein COLO4_18947 [Corchorus olitorius]
          Length = 1201

 Score =  694 bits (1791), Expect = 0.0
 Identities = 335/418 (80%), Positives = 377/418 (90%), Gaps = 3/418 (0%)
 Frame = +2

Query: 2    VRPIEYYLDASIVTNGLSRAFSTGAWSHPFKRTERISGVVANLGRANPLQALVDLRRTRQ 181
            VRPIE+YLD +IVTNGLSRAFSTGAWSHP+K+ ERISGVVANLGRAN LQ ++DLR+TRQ
Sbjct: 442  VRPIEHYLDGTIVTNGLSRAFSTGAWSHPYKKMERISGVVANLGRANALQTMIDLRKTRQ 501

Query: 182  QVRYTGKVGDARYPHPSHWGKICFLSTPDGEKCGLVKNMGVTGLVSTNILEPILGQLFDS 361
            QV+YTGKVGDARYPHPSHWGK+CFLSTPDGE CGLVKN+  TGLVSTNI+E I+ +LFDS
Sbjct: 502  QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNIVESIVDKLFDS 561

Query: 362  GMEKLVDDASTSLEGKYKVFVNGDWVGVCKDSLSFVAELRSKRRRQELPNQVEIKRDEQQ 541
            GMEKLV+D S+SL+GK+K+F+NG+WVGVC+DSLSF AE+R KRR  ELP+QVEIKRDE +
Sbjct: 562  GMEKLVNDTSSSLDGKFKIFLNGEWVGVCEDSLSFAAEVRRKRRMTELPHQVEIKRDEHK 621

Query: 542  CEVRIFLDAGRILRPLLVVENLGRIKS-STGKNFTFRSLLDSGIIELVGTEEEEDCCTAW 718
             EVRIF D+GRILRPLLVVENL +IKS    KNFTF+SLLD GI+EL+GTEEEEDC TAW
Sbjct: 622  GEVRIFTDSGRILRPLLVVENLSKIKSFKAEKNFTFQSLLDKGIVELIGTEEEEDCRTAW 681

Query: 719  GIKYLLKDNEDDKPVKFTHCELDMSFLLGLSCGIIPFANHDHARRILYQSQKHSSQAIGF 898
            GIKYLL D +  + VK+THCELDMSFLLGLSCGIIPFANHDHARR+LYQ+QKHS QAIGF
Sbjct: 682  GIKYLLADVKGKESVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGF 741

Query: 899  PTTNPNIRVDTLSHQLFYPQRPLFRTMTSDCLGTPGY--GHNGILPRPELYNGQNAIVAV 1072
             TTNPNIRVDTLSHQ++YPQRPLFRTMTSDCLG PGY  G NG+ P+PELYNGQNAIVAV
Sbjct: 742  STTNPNIRVDTLSHQMYYPQRPLFRTMTSDCLGKPGYPLGQNGLEPKPELYNGQNAIVAV 801

Query: 1073 NVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNEELQVKRRPSDDKVNFGKIQ 1246
            NVHLGYNQEDSLVMNRASLERGMFRSEH+RSYKAEVDN+E+Q K+R   D VNFGKIQ
Sbjct: 802  NVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNQEMQDKKRKLGDVVNFGKIQ 859


>XP_011036682.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Populus euphratica]
          Length = 1190

 Score =  692 bits (1785), Expect = 0.0
 Identities = 334/417 (80%), Positives = 369/417 (88%), Gaps = 2/417 (0%)
 Frame = +2

Query: 2    VRPIEYYLDASIVTNGLSRAFSTGAWSHPFKRTERISGVVANLGRANPLQALVDLRRTRQ 181
            V PIE+YLDASIVTNGL+RAFSTGAW HPFK  ER+SGVV NLGRANPLQ ++DLR+TRQ
Sbjct: 446  VHPIEHYLDASIVTNGLTRAFSTGAWCHPFKWMERVSGVVGNLGRANPLQTMIDLRKTRQ 505

Query: 182  QVRYTGKVGDARYPHPSHWGKICFLSTPDGEKCGLVKNMGVTGLVSTNILEPILGQLFDS 361
            QV YTGKVGDARYPHPSHWG++CFLSTPDGE CGLVKN+ VTG+VSTNI E ++ +LF S
Sbjct: 506  QVLYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNLAVTGVVSTNISESLVDKLFGS 565

Query: 362  GMEKLVDDASTSLEGKYKVFVNGDWVGVCKDSLSFVAELRSKRRRQELPNQVEIKRDEQQ 541
            GMEKLVDD  T L+GK+KVF+NG+WVGVC+DS  FV ELRS RRR+ELP QVEIKRDEQQ
Sbjct: 566  GMEKLVDDTYTKLDGKHKVFLNGEWVGVCEDSCLFVGELRSMRRRRELPYQVEIKRDEQQ 625

Query: 542  CEVRIFLDAGRILRPLLVVENLGRIKSSTGKNFTFRSLLDSGIIELVGTEEEEDCCTAWG 721
             EVRIF DAGRILRPLLVVENL +IK+  G N+ F SLLD GIIE +GTEEEEDCCTAWG
Sbjct: 626  REVRIFSDAGRILRPLLVVENLDKIKAFKGGNYIFTSLLDKGIIEFIGTEEEEDCCTAWG 685

Query: 722  IKYLLKDNEDDKPVKFTHCELDMSFLLGLSCGIIPFANHDHARRILYQSQKHSSQAIGFP 901
            IK+LL D E  +P+K+THCELDMSFLLGLSCGIIPFANHDHARR+LYQ+QKHS QAIGF 
Sbjct: 686  IKFLLADIEGKQPMKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFS 745

Query: 902  TTNPNIRVDTLSHQLFYPQRPLFRTMTSDCLGTPGY--GHNGILPRPELYNGQNAIVAVN 1075
            TTNPNIRVDTLSHQL YPQRPLFRTM SDCLG PGY  GHN +LP+PEL+NGQNAIVAVN
Sbjct: 746  TTNPNIRVDTLSHQLHYPQRPLFRTMISDCLGKPGYPLGHNAVLPKPELFNGQNAIVAVN 805

Query: 1076 VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNEELQVKRRPSDDKVNFGKIQ 1246
            VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDN+EL  KRR S+D + FGKIQ
Sbjct: 806  VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKELTDKRRKSEDSITFGKIQ 862


>GAV84304.1 RNA_pol_Rpb2_6 domain-containing protein/RNA_pol_Rpb2_7
            domain-containing protein/RNA_pol_Rpb2_2
            domain-containing protein/RNA_pol_Rpb2_1
            domain-containing protein/RNA_pol_Rpb2_3
            domain-containing protein/RNA_pol_Rpb2_4
            domain-containing protein/RNA_pol_Rpb2_5
            domain-containing protein [Cephalotus follicularis]
          Length = 1196

 Score =  691 bits (1783), Expect = 0.0
 Identities = 335/417 (80%), Positives = 375/417 (89%), Gaps = 2/417 (0%)
 Frame = +2

Query: 2    VRPIEYYLDASIVTNGLSRAFSTGAWSHPFKRTERISGVVANLGRANPLQALVDLRRTRQ 181
            +RPIE+YLDASIVTNGLSRAFSTGAWSHPFKR ERISGVVANLGRANPLQ ++DLR+TRQ
Sbjct: 454  IRPIEHYLDASIVTNGLSRAFSTGAWSHPFKRMERISGVVANLGRANPLQTMLDLRKTRQ 513

Query: 182  QVRYTGKVGDARYPHPSHWGKICFLSTPDGEKCGLVKNMGVTGLVSTNILEPILGQLFDS 361
             V+YTGKVGDAR+PHPSHWGK+CFLSTPDGE CGLVKN+ +TGLVSTNILEPI  +LFD 
Sbjct: 514  HVQYTGKVGDARFPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTNILEPITDKLFDC 573

Query: 362  GMEKLVDDASTSLEGKYKVFVNGDWVGVCKDSLSFVAELRSKRRRQELPNQVEIKRDEQQ 541
            G+E+LVDD S+SL GK KVF+NGDWVGVC+DSLSFVAELR  RRR+ELP+Q+EIKRDEQ+
Sbjct: 574  GIEQLVDDTSSSLHGKDKVFLNGDWVGVCEDSLSFVAELRRMRRRKELPHQLEIKRDEQE 633

Query: 542  CEVRIFLDAGRILRPLLVVENLGRIKSSTGKNFTFRSLLDSGIIELVGTEEEEDCCTAWG 721
             E+RIF DAGRILRPLLVVENL +IK+    ++TF+S LD GIIEL+G EEEEDC TAWG
Sbjct: 634  GEIRIFSDAGRILRPLLVVENLIKIKAFKSDSYTFQSFLDKGIIELIGAEEEEDCRTAWG 693

Query: 722  IKYLLKDNEDDKPVKFTHCELDMSFLLGLSCGIIPFANHDHARRILYQSQKHSSQAIGFP 901
            IKYLL + E+ +P+K+THCELDMSFLLGLSCGIIPFANHDHARR+LYQSQKHS QAIGF 
Sbjct: 694  IKYLLMEVEEKQPLKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSQQAIGFS 753

Query: 902  TTNPNIRVDTLSHQLFYPQRPLFRTMTSDCLGTPGY--GHNGILPRPELYNGQNAIVAVN 1075
            TTNP+IRVDTLSHQL YPQRPLFRTM SDCLG P Y  G  GI+P+PE YNGQNAIVAVN
Sbjct: 754  TTNPSIRVDTLSHQLHYPQRPLFRTMASDCLGKPEYPLGPKGIVPKPEYYNGQNAIVAVN 813

Query: 1076 VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNEELQVKRRPSDDKVNFGKIQ 1246
            VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDN+ELQ K+R  +D +NFGKIQ
Sbjct: 814  VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKELQDKKRKLEDCINFGKIQ 870


>OMO69360.1 hypothetical protein COLO4_29107 [Corchorus olitorius]
          Length = 1034

 Score =  684 bits (1764), Expect = 0.0
 Identities = 331/418 (79%), Positives = 375/418 (89%), Gaps = 3/418 (0%)
 Frame = +2

Query: 2    VRPIEYYLDASIVTNGLSRAFSTGAWSHPFKRTERISGVVANLGRANPLQALVDLRRTRQ 181
            +RPIE+YLD +IVTNGLSRAFSTGAWSH +K+ ERISGVVANLGRANPLQ +VDLR+TRQ
Sbjct: 275  IRPIEHYLDGTIVTNGLSRAFSTGAWSHSYKKMERISGVVANLGRANPLQTMVDLRKTRQ 334

Query: 182  QVRYTGKVGDARYPHPSHWGKICFLSTPDGEKCGLVKNMGVTGLVSTNILEPILGQLFDS 361
            QV+YTGKVGDARYPHPSHWGK+CFLSTPDGE CGLVKN+  TGLVSTNI+E I+ +LFDS
Sbjct: 335  QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNIVESIVDKLFDS 394

Query: 362  GMEKLVDDASTSLEGKYKVFVNGDWVGVCKDSLSFVAELRSKRRRQELPNQVEIKRDEQQ 541
            GME+LV+D S+SL+GK K+F+NG+WVGVC+DSLSF AE+R KRR  ELP+QVEIKRDE +
Sbjct: 395  GMEELVNDTSSSLDGKDKIFLNGEWVGVCEDSLSFAAEVRRKRRMTELPHQVEIKRDEHK 454

Query: 542  CEVRIFLDAGRILRPLLVVENLGRIKS-STGKNFTFRSLLDSGIIELVGTEEEEDCCTAW 718
             EVRIF DAGRILRPLLVV+NL +IK+    KNFTF+SLLD GIIEL+GTEEEEDC  AW
Sbjct: 455  GEVRIFTDAGRILRPLLVVKNLSKIKAFKAEKNFTFQSLLDKGIIELIGTEEEEDCRNAW 514

Query: 719  GIKYLLKDNEDDKPVKFTHCELDMSFLLGLSCGIIPFANHDHARRILYQSQKHSSQAIGF 898
            GIKYLL D ++ + VK+THCELDMSFLLGLSCGIIPFANHDHARR+LYQ+QKHS QAIGF
Sbjct: 515  GIKYLLADVKEKESVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGF 574

Query: 899  PTTNPNIRVDTLSHQLFYPQRPLFRTMTSDCLGTPGY--GHNGILPRPELYNGQNAIVAV 1072
             TTNPNIRVDTLSHQ++YPQRPLFRTMTSDCLG PGY  G NG+ P+PELYNGQ AIVAV
Sbjct: 575  STTNPNIRVDTLSHQMYYPQRPLFRTMTSDCLGKPGYPLGQNGLEPKPELYNGQIAIVAV 634

Query: 1073 NVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNEELQVKRRPSDDKVNFGKIQ 1246
            NVHLGYNQEDSLVMNRASLERGMFRSEH+RSYKAEVDN+E+  K+R  +D VNFGKIQ
Sbjct: 635  NVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNQEMSDKKRKLEDIVNFGKIQ 692


>OAY53599.1 hypothetical protein MANES_03G009000 [Manihot esculenta]
          Length = 1205

 Score =  684 bits (1766), Expect = 0.0
 Identities = 331/417 (79%), Positives = 368/417 (88%), Gaps = 2/417 (0%)
 Frame = +2

Query: 2    VRPIEYYLDASIVTNGLSRAFSTGAWSHPFKRTERISGVVANLGRANPLQALVDLRRTRQ 181
            VRPIE+YLDASIVTNGLSRAFSTGAWSHPFKR ERISGVVANLGR NPLQ +VDLR+TRQ
Sbjct: 461  VRPIEHYLDASIVTNGLSRAFSTGAWSHPFKRMERISGVVANLGRTNPLQTMVDLRKTRQ 520

Query: 182  QVRYTGKVGDARYPHPSHWGKICFLSTPDGEKCGLVKNMGVTGLVSTNILEPILGQLFDS 361
             V+YTGKVGDARYPHPSHWG++CFLSTPDGE CGLVKN+  TGLVSTNI EP++ +LFD 
Sbjct: 521  LVQYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNLAATGLVSTNISEPLVDKLFDC 580

Query: 362  GMEKLVDDASTSLEGKYKVFVNGDWVGVCKDSLSFVAELRSKRRRQELPNQVEIKRDEQQ 541
            GMEKLVDD +T L  KY+VF+NG+WVGVC+DS  FVAE R  RRR+    QVEIKRDEQQ
Sbjct: 581  GMEKLVDDTNTKLHRKYRVFLNGEWVGVCEDSHLFVAEFRRLRRRKRFHQQVEIKRDEQQ 640

Query: 542  CEVRIFLDAGRILRPLLVVENLGRIKSSTGKNFTFRSLLDSGIIELVGTEEEEDCCTAWG 721
             EVRIF DAGRILRPL+VV+NL +IK+  G N+TF+SLLD GI+E VGTEEEEDC  AWG
Sbjct: 641  REVRIFSDAGRILRPLVVVQNLTKIKAFKGGNYTFQSLLDKGIVEFVGTEEEEDCSIAWG 700

Query: 722  IKYLLKDNEDDKPVKFTHCELDMSFLLGLSCGIIPFANHDHARRILYQSQKHSSQAIGFP 901
            +K+LL   +  + +K+THCELD+SFLLGLSCGIIPFANHDHARR+LYQ+QKHS QAIGFP
Sbjct: 701  VKFLLAGPDGKQSLKYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFP 760

Query: 902  TTNPNIRVDTLSHQLFYPQRPLFRTMTSDCLGTPGY--GHNGILPRPELYNGQNAIVAVN 1075
            TTNPNIRVDTLSHQL YPQRPLFRTMTSDCLG PGY  GHNG+LP+PELYNGQNAIVAVN
Sbjct: 761  TTNPNIRVDTLSHQLHYPQRPLFRTMTSDCLGKPGYRRGHNGMLPKPELYNGQNAIVAVN 820

Query: 1076 VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNEELQVKRRPSDDKVNFGKIQ 1246
            VHLGYNQEDSLVMNR+SLERGMFRSEHIRSYKA+VDN+EL  KRR  DD VNFGKIQ
Sbjct: 821  VHLGYNQEDSLVMNRSSLERGMFRSEHIRSYKADVDNKELVDKRRRFDDPVNFGKIQ 877


>OMO57303.1 hypothetical protein COLO4_35449 [Corchorus olitorius]
          Length = 1196

 Score =  683 bits (1763), Expect = 0.0
 Identities = 334/418 (79%), Positives = 375/418 (89%), Gaps = 3/418 (0%)
 Frame = +2

Query: 2    VRPIEYYLDASIVTNGLSRAFSTGAWSHPFKRTERISGVVANLGRANPLQALVDLRRTRQ 181
            VRPIE+YLD++IVTNGL RAFSTGAWSHP KR ERISGVVANLGRA PLQ +VDLR+TRQ
Sbjct: 455  VRPIEHYLDSAIVTNGLLRAFSTGAWSHPSKR-ERISGVVANLGRATPLQTMVDLRKTRQ 513

Query: 182  QVRYTGKVGDARYPHPSHWGKICFLSTPDGEKCGLVKNMGVTGLVSTNILEPILGQLFDS 361
            QV+YTGKVGDARYPHPSHWGK+CFLSTPDGE CGLVKN+  TGLVSTNI+E I+ +LFDS
Sbjct: 514  QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNIVESIIDKLFDS 573

Query: 362  GMEKLVDDASTSLEGKYKVFVNGDWVGVCKDSLSFVAELRSKRRRQELPNQVEIKRDEQQ 541
            GMEKLV+D S+SL+GK K+F+NG+WVG+C+DSLSF AE+R KRR  ELP+QVEIKRDE +
Sbjct: 574  GMEKLVNDTSSSLDGKDKIFLNGEWVGICEDSLSFAAEVRRKRRMTELPHQVEIKRDEHK 633

Query: 542  CEVRIFLDAGRILRPLLVVENLGRIKS-STGKNFTFRSLLDSGIIELVGTEEEEDCCTAW 718
             EVRIF DAGRILRPLLVVENL +IK+    K FTF+SLLD GI+EL+GTEEEEDCCTAW
Sbjct: 634  -EVRIFTDAGRILRPLLVVENLSKIKAFKAEKKFTFQSLLDKGIVELIGTEEEEDCCTAW 692

Query: 719  GIKYLLKDNEDDKPVKFTHCELDMSFLLGLSCGIIPFANHDHARRILYQSQKHSSQAIGF 898
            GIKYLL D +  + VK+THCELDMSFLLGLSCGIIPFANHDHARR+LYQ+QKHS QAIGF
Sbjct: 693  GIKYLLADVKGKESVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGF 752

Query: 899  PTTNPNIRVDTLSHQLFYPQRPLFRTMTSDCLGTPGY--GHNGILPRPELYNGQNAIVAV 1072
             TTNPNIRVDTLSHQ++YPQRPLFRTMTSDCLG PGY  G NG+ P+PELYNGQNAIVAV
Sbjct: 753  STTNPNIRVDTLSHQMYYPQRPLFRTMTSDCLGKPGYPLGQNGLAPKPELYNGQNAIVAV 812

Query: 1073 NVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNEELQVKRRPSDDKVNFGKIQ 1246
            NVHLG+NQEDSLVMNRASLERGMFRSEH+RSYKAEVDN+ELQ K+R  +D V FGKIQ
Sbjct: 813  NVHLGFNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNQELQDKKRKLEDIVKFGKIQ 870


>OMO61577.1 hypothetical protein CCACVL1_23410 [Corchorus capsularis]
          Length = 1461

 Score =  691 bits (1783), Expect = 0.0
 Identities = 334/418 (79%), Positives = 376/418 (89%), Gaps = 3/418 (0%)
 Frame = +2

Query: 2    VRPIEYYLDASIVTNGLSRAFSTGAWSHPFKRTERISGVVANLGRANPLQALVDLRRTRQ 181
            VRPIE+YLD +IVTNGLSRAFSTGAWSHP+K+ ERISGVVANLGRAN LQ +VDLR+TRQ
Sbjct: 702  VRPIEHYLDGTIVTNGLSRAFSTGAWSHPYKKMERISGVVANLGRANALQTMVDLRKTRQ 761

Query: 182  QVRYTGKVGDARYPHPSHWGKICFLSTPDGEKCGLVKNMGVTGLVSTNILEPILGQLFDS 361
            QV YTGKVGDARYPHPSHWGK+CFLSTPDGE CGLVKN+  TGLVSTNI+E I+ +LFDS
Sbjct: 762  QVLYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNIVESIVDKLFDS 821

Query: 362  GMEKLVDDASTSLEGKYKVFVNGDWVGVCKDSLSFVAELRSKRRRQELPNQVEIKRDEQQ 541
            GMEKLV+D S++L+GK+K+F+NG+WVGVC+DSLSF AE+R KRR  ELP+QVEIKRDE +
Sbjct: 822  GMEKLVNDTSSALDGKFKIFLNGEWVGVCEDSLSFAAEVRRKRRMTELPHQVEIKRDEHK 881

Query: 542  CEVRIFLDAGRILRPLLVVENLGRIKS-STGKNFTFRSLLDSGIIELVGTEEEEDCCTAW 718
             EVRIF+D+GRILRPLLVVENL +IKS    KNFTF+SLLD GI+EL+GTEEEEDC TAW
Sbjct: 882  GEVRIFIDSGRILRPLLVVENLSKIKSFKAEKNFTFQSLLDKGIVELIGTEEEEDCRTAW 941

Query: 719  GIKYLLKDNEDDKPVKFTHCELDMSFLLGLSCGIIPFANHDHARRILYQSQKHSSQAIGF 898
            GIKYLL D +  + VK+THCELDMSFLLGLSCGIIPFANHDHARR+LYQ+QKHS QAIGF
Sbjct: 942  GIKYLLADVKGKESVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGF 1001

Query: 899  PTTNPNIRVDTLSHQLFYPQRPLFRTMTSDCLGTPGY--GHNGILPRPELYNGQNAIVAV 1072
             TTNPNIRVDTLSHQ++YPQRPLF TMTSDCLG PGY  G NG+ P+PELYNGQNAIVAV
Sbjct: 1002 STTNPNIRVDTLSHQMYYPQRPLFHTMTSDCLGKPGYPLGQNGLEPKPELYNGQNAIVAV 1061

Query: 1073 NVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNEELQVKRRPSDDKVNFGKIQ 1246
            NVHLGYNQEDSLVMNRASLERGMFRSEH+RSYKAEVDN+E+Q K+R   D VNFGKIQ
Sbjct: 1062 NVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNQEMQDKKRKLGDIVNFGKIQ 1119


>XP_002283296.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Vitis
            vinifera] XP_010648748.1 PREDICTED: DNA-directed RNA
            polymerases IV and V subunit 2 [Vitis vinifera]
          Length = 1198

 Score =  682 bits (1759), Expect = 0.0
 Identities = 329/417 (78%), Positives = 367/417 (88%), Gaps = 2/417 (0%)
 Frame = +2

Query: 2    VRPIEYYLDASIVTNGLSRAFSTGAWSHPFKRTERISGVVANLGRANPLQALVDLRRTRQ 181
            +RPIE YLDASI+TNGLSRAFSTG WSHPFKR ERISGVVA L R NPLQ   D+R+TRQ
Sbjct: 455  LRPIENYLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQ 514

Query: 182  QVRYTGKVGDARYPHPSHWGKICFLSTPDGEKCGLVKNMGVTGLVSTNILEPILGQLFDS 361
            QV+YTGKVGDARYPHPSHWGK+CFLSTPDGE CGLVKN+ +TGLVST +L+P++ +LFD 
Sbjct: 515  QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTEVLDPLVDKLFDC 574

Query: 362  GMEKLVDDASTSLEGKYKVFVNGDWVGVCKDSLSFVAELRSKRRRQELPNQVEIKRDEQQ 541
            GMEKLVDD ST L GK KVF++GDWVGVC+D +SFV ELR+KRR +ELP QVEIKRDEQQ
Sbjct: 575  GMEKLVDDTSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEIKRDEQQ 634

Query: 542  CEVRIFLDAGRILRPLLVVENLGRIKSSTGKNFTFRSLLDSGIIELVGTEEEEDCCTAWG 721
             EVRIF DAGRILRPLLVVENL ++K+  G +FTF+SLLD GI+EL+G EEEEDC TAWG
Sbjct: 635  GEVRIFSDAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWG 694

Query: 722  IKYLLKDNEDDKPVKFTHCELDMSFLLGLSCGIIPFANHDHARRILYQSQKHSSQAIGFP 901
            IKYLLK   DD PVK+THCELDMSFLLGLSCGIIP+ANHDHARR+LYQS+KHS QAIGF 
Sbjct: 695  IKYLLK-GHDDPPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFS 753

Query: 902  TTNPNIRVDTLSHQLFYPQRPLFRTMTSDCLGTPGY--GHNGILPRPELYNGQNAIVAVN 1075
            TTNPNIRVDTLSHQL+YPQRPLFRTM SDCLG PGY  GH GI+PRPE +NGQ AIVAVN
Sbjct: 754  TTNPNIRVDTLSHQLYYPQRPLFRTMISDCLGKPGYSEGHKGIVPRPEYFNGQIAIVAVN 813

Query: 1076 VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNEELQVKRRPSDDKVNFGKIQ 1246
            VHLGYNQEDSLVMNRASLERGMFRSEHIRSYK+EVDN E   K+R S+D V+FGK+Q
Sbjct: 814  VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKMQ 870


>XP_018839587.1 PREDICTED: DNA-directed RNA polymerase D subunit 2b-like [Juglans
            regia]
          Length = 1191

 Score =  681 bits (1758), Expect = 0.0
 Identities = 331/417 (79%), Positives = 367/417 (88%), Gaps = 2/417 (0%)
 Frame = +2

Query: 2    VRPIEYYLDASIVTNGLSRAFSTGAWSHPFKRTERISGVVANLGRANPLQALVDLRRTRQ 181
            VRPIE+YLDASI+TNGL+RAFSTGAWSHPFKR ERISGVVA LGR NPLQ L ++RRTRQ
Sbjct: 449  VRPIEHYLDASIITNGLTRAFSTGAWSHPFKRMERISGVVATLGRTNPLQTLAEMRRTRQ 508

Query: 182  QVRYTGKVGDARYPHPSHWGKICFLSTPDGEKCGLVKNMGVTGLVSTNILEPILGQLFDS 361
            QV+YTGKVGDARYPHPSHWG++CFLSTPDGE CGLVKN+ +TGLVSTNILEP+    FD 
Sbjct: 509  QVQYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNLAITGLVSTNILEPMTHIFFDC 568

Query: 362  GMEKLVDDASTSLEGKYKVFVNGDWVGVCKDSLSFVAELRSKRRRQELPNQVEIKRDEQQ 541
            GME+L DDAS     KYKVF+NGDWVGVC+DS+SFVAELR+KRR++ LP+QVEIKRDEQ 
Sbjct: 569  GMEELADDASMCR--KYKVFLNGDWVGVCEDSISFVAELRNKRRQKLLPHQVEIKRDEQH 626

Query: 542  CEVRIFLDAGRILRPLLVVENLGRIKSSTGKNFTFRSLLDSGIIELVGTEEEEDCCTAWG 721
             EVRIF DAGRILRPLLVVENL ++K   G+N+TF+ LLD GIIEL+GTEEEEDC TAWG
Sbjct: 627  EEVRIFSDAGRILRPLLVVENLNKVKGYKGENYTFQYLLDKGIIELIGTEEEEDCRTAWG 686

Query: 722  IKYLLKDNEDDKPVKFTHCELDMSFLLGLSCGIIPFANHDHARRILYQSQKHSSQAIGFP 901
            IKYL  + E   P ++THCELDMSFLLGLSCGI+P+ANHDHARR+LYQSQKHSSQAIGF 
Sbjct: 687  IKYLFMEKEGKSPAQYTHCELDMSFLLGLSCGIVPYANHDHARRVLYQSQKHSSQAIGFS 746

Query: 902  TTNPNIRVDTLSHQLFYPQRPLFRTMTSDCLGTPG--YGHNGILPRPELYNGQNAIVAVN 1075
            TTNPNIRVDTLSH L YPQRPLFRT+ SDCLG PG   GH+GILP+PELYNGQNAIVAVN
Sbjct: 747  TTNPNIRVDTLSHSLLYPQRPLFRTIASDCLGKPGSPLGHHGILPKPELYNGQNAIVAVN 806

Query: 1076 VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNEELQVKRRPSDDKVNFGKIQ 1246
            VHLGYNQEDSLVMN+ASLERGMFRSEHIRSYKAEVDN+E   KRR  DD VNFGKIQ
Sbjct: 807  VHLGYNQEDSLVMNKASLERGMFRSEHIRSYKAEVDNKETLEKRRKPDDCVNFGKIQ 863


>KJB07693.1 hypothetical protein B456_001G037900 [Gossypium raimondii]
          Length = 1038

 Score =  671 bits (1732), Expect = 0.0
 Identities = 327/422 (77%), Positives = 373/422 (88%), Gaps = 7/422 (1%)
 Frame = +2

Query: 2    VRPIEYYLDASIVTNGLSRAFSTGAWSHPFKRTERISGVVANLGRANPLQALVDLRRTRQ 181
            VRPIE+YLDASIVTNGLSRAFSTGAWSHP+K+ ERISGVVANLGRANPLQ +VDLR+TRQ
Sbjct: 455  VRPIEHYLDASIVTNGLSRAFSTGAWSHPYKKMERISGVVANLGRANPLQTMVDLRKTRQ 514

Query: 182  QVRYTGKVGDARYPHPSHWGKICFLSTPDGEKCGLVKNMGVTGLVSTNIL----EPILGQ 349
            QV+YTGKVGDARYPHPSHWGK+CFLSTPDGE CGLVKN+  T LVSTNI+    E I+  
Sbjct: 515  QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTALVSTNIVKSVVESIVDT 574

Query: 350  LFDSGMEKLVDDASTSLEGKYKVFVNGDWVGVCKDSLSFVAELRSKRRRQELPNQVEIKR 529
            LFDSGMEK+V+D S+SL+GK KVF+NG+WVGVC+DSL F AELR KRRR+ELP QVEIKR
Sbjct: 575  LFDSGMEKVVNDTSSSLDGKDKVFLNGEWVGVCEDSLFFAAELRRKRRRKELPYQVEIKR 634

Query: 530  DEQQCEVRIFLDAGRILRPLLVVENLGRIKSSTGK-NFTFRSLLDSGIIELVGTEEEEDC 706
            DE + EVRIF DAGRILRPLLVVENL ++K+  GK N+ F+ LLD GI+EL+G EEEEDC
Sbjct: 635  DEHKGEVRIFTDAGRILRPLLVVENLFKLKAFKGKENYAFQPLLDKGIVELIGAEEEEDC 694

Query: 707  CTAWGIKYLLKDNEDDKPVKFTHCELDMSFLLGLSCGIIPFANHDHARRILYQSQKHSSQ 886
             TAWGI+YLL + E  +PVK+THCELDMSFLLGLSCGIIPFANHDHARR+LYQ+QKHS Q
Sbjct: 695  RTAWGIRYLLTEVEGKQPVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQ 754

Query: 887  AIGFPTTNPNIRVDTLSHQLFYPQRPLFRTMTSDCLGTPGY--GHNGILPRPELYNGQNA 1060
            AIGF TTNPNIRVDTLSHQ++YPQRPLF TMT+DCLG  G+  G N + P+PELYNGQNA
Sbjct: 755  AIGFSTTNPNIRVDTLSHQMYYPQRPLFHTMTADCLGKSGFPLGQNRLEPKPELYNGQNA 814

Query: 1061 IVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNEELQVKRRPSDDKVNFGK 1240
            IVAVNVHLGYNQEDSLVMNRAS+ERGMFR+EH+RSYKAEVDN+E+Q KRR ++D VNFGK
Sbjct: 815  IVAVNVHLGYNQEDSLVMNRASIERGMFRTEHVRSYKAEVDNKEIQEKRRKAEDIVNFGK 874

Query: 1241 IQ 1246
             +
Sbjct: 875  TE 876


>XP_002515428.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Ricinus
            communis] EEF46877.1 DNA-directed RNA polymerase subunit,
            putative [Ricinus communis]
          Length = 1203

 Score =  674 bits (1739), Expect = 0.0
 Identities = 328/416 (78%), Positives = 368/416 (88%), Gaps = 2/416 (0%)
 Frame = +2

Query: 2    VRPIEYYLDASIVTNGLSRAFSTGAWSHPFKRTERISGVVANLGRANPLQALVDLRRTRQ 181
            VRPIE+YLDASIVTNGLSRAFSTGAWSHP+KR ERISGVVANLGRANPLQ +VDLR+TR 
Sbjct: 459  VRPIEHYLDASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRY 518

Query: 182  QVRYTGKVGDARYPHPSHWGKICFLSTPDGEKCGLVKNMGVTGLVSTNILEPILGQLFDS 361
             V+YTGKVGDAR+PHPSHWG++CFLSTPDGE CGLVKN+  TGLVS NILEP++ +L   
Sbjct: 519  HVQYTGKVGDARFPHPSHWGRVCFLSTPDGENCGLVKNLATTGLVSVNILEPLIDKLIAR 578

Query: 362  GMEKLVDDASTSLEGKYKVFVNGDWVGVCKDSLSFVAELRSKRRRQELPNQVEIKRDEQQ 541
            GMEK+ +D+ + L+ K KVF+NG+WVGVC+DS  FVAELR  RRR++LP QVEIKRDEQQ
Sbjct: 579  GMEKVPEDSHSDLDEKDKVFLNGEWVGVCEDSRLFVAELRRLRRRKKLPQQVEIKRDEQQ 638

Query: 542  CEVRIFLDAGRILRPLLVVENLGRIKSSTGKNFTFRSLLDSGIIELVGTEEEEDCCTAWG 721
             EVRIF DAGRILRPLLVV+NL +I++  G N TF+SLLD GIIE VGTEEEEDC TAWG
Sbjct: 639  QEVRIFSDAGRILRPLLVVQNLHKIEAFKGGNCTFQSLLDKGIIEFVGTEEEEDCSTAWG 698

Query: 722  IKYLLKDNEDDKPVKFTHCELDMSFLLGLSCGIIPFANHDHARRILYQSQKHSSQAIGFP 901
            IK+LL   +  + +K+THCELDMSFLLGLSCGIIPFANHDHARR+LYQ+QKHS QAIGFP
Sbjct: 699  IKFLLSGVDGKQSLKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFP 758

Query: 902  TTNPNIRVDTLSHQLFYPQRPLFRTMTSDCLGTPG--YGHNGILPRPELYNGQNAIVAVN 1075
            TTNPNIRVDTLSHQL+YPQRPLFRT+TSDCLG PG   GHNGI+P+PELYNGQNAIVAVN
Sbjct: 759  TTNPNIRVDTLSHQLYYPQRPLFRTVTSDCLGKPGDTRGHNGIVPKPELYNGQNAIVAVN 818

Query: 1076 VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNEELQVKRRPSDDKVNFGKI 1243
            VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKA+VDN+EL  KRR  DD VNFGKI
Sbjct: 819  VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKELLDKRRKYDDNVNFGKI 874


>XP_002324332.2 DNA-directed RNA polymerase family protein [Populus trichocarpa]
            EEF02897.2 DNA-directed RNA polymerase family protein
            [Populus trichocarpa]
          Length = 1181

 Score =  673 bits (1736), Expect = 0.0
 Identities = 327/415 (78%), Positives = 363/415 (87%)
 Frame = +2

Query: 2    VRPIEYYLDASIVTNGLSRAFSTGAWSHPFKRTERISGVVANLGRANPLQALVDLRRTRQ 181
            V PIE+YLDASIVTNGL+RAFSTGAW HPFK  ER+SGVV NLGRANPLQ ++DLR+TRQ
Sbjct: 448  VHPIEHYLDASIVTNGLTRAFSTGAWCHPFKWMERVSGVVGNLGRANPLQTMIDLRKTRQ 507

Query: 182  QVRYTGKVGDARYPHPSHWGKICFLSTPDGEKCGLVKNMGVTGLVSTNILEPILGQLFDS 361
            QV YTGKVGDARYPHPSHWG++CFLSTPDGE CGLVKN+ VTG+VSTNI E ++ +LFDS
Sbjct: 508  QVLYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNLAVTGVVSTNISESLVDKLFDS 567

Query: 362  GMEKLVDDASTSLEGKYKVFVNGDWVGVCKDSLSFVAELRSKRRRQELPNQVEIKRDEQQ 541
            GMEKLVDD  T L+GK+KVF+NG+WVGVC+DS  FV ELRS RRR+ELP QVEIKRDEQQ
Sbjct: 568  GMEKLVDDTYTKLDGKHKVFLNGEWVGVCEDSCLFVGELRSMRRRRELPYQVEIKRDEQQ 627

Query: 542  CEVRIFLDAGRILRPLLVVENLGRIKSSTGKNFTFRSLLDSGIIELVGTEEEEDCCTAWG 721
             EVRIF DAGRILRPLLVVENL +IK+  G N+ F SLLD GIIE +GTEEEEDCCTAWG
Sbjct: 628  REVRIFSDAGRILRPLLVVENLDKIKAFKGGNYIFTSLLDKGIIEFIGTEEEEDCCTAWG 687

Query: 722  IKYLLKDNEDDKPVKFTHCELDMSFLLGLSCGIIPFANHDHARRILYQSQKHSSQAIGFP 901
            IK+LL D E  +P+K++HCELDMSFLLGLSCGIIPFANHDHARR+LYQ+QKHS QAIGF 
Sbjct: 688  IKFLLADIEGKQPMKYSHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFS 747

Query: 902  TTNPNIRVDTLSHQLFYPQRPLFRTMTSDCLGTPGYGHNGILPRPELYNGQNAIVAVNVH 1081
            TTNPNIRVDTLSHQL YPQRPLFRTM SDCL         +LP+PEL+NGQNAIVAVNVH
Sbjct: 748  TTNPNIRVDTLSHQLHYPQRPLFRTMISDCL---------VLPKPELFNGQNAIVAVNVH 798

Query: 1082 LGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNEELQVKRRPSDDKVNFGKIQ 1246
            LGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDN+EL  KRR S+D + FGKIQ
Sbjct: 799  LGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKELTDKRRKSEDSITFGKIQ 853


>XP_017608025.1 PREDICTED: DNA-directed RNA polymerase D subunit 2b-like [Gossypium
            arboreum] KHG03399.1 DNA-directed RNA polymerase D
            subunit 2a -like protein [Gossypium arboreum]
          Length = 1204

 Score =  672 bits (1735), Expect = 0.0
 Identities = 328/422 (77%), Positives = 373/422 (88%), Gaps = 7/422 (1%)
 Frame = +2

Query: 2    VRPIEYYLDASIVTNGLSRAFSTGAWSHPFKRTERISGVVANLGRANPLQALVDLRRTRQ 181
            VRPIE+YLDASIVTNGLSRAFSTGAWSHP+K+ ERISGVVANLGRANPLQ +VDLR+TRQ
Sbjct: 455  VRPIEHYLDASIVTNGLSRAFSTGAWSHPYKKMERISGVVANLGRANPLQTMVDLRKTRQ 514

Query: 182  QVRYTGKVGDARYPHPSHWGKICFLSTPDGEKCGLVKNMGVTGLVSTNIL----EPILGQ 349
            QV+YTGKVGDARYPHPSHWGK+CFLSTPDGE CGLVKN+  T LVSTNI+    E I+  
Sbjct: 515  QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTALVSTNIVKSVVESIVDT 574

Query: 350  LFDSGMEKLVDDASTSLEGKYKVFVNGDWVGVCKDSLSFVAELRSKRRRQELPNQVEIKR 529
            LFDSGMEK+V+D S+SL+GK KVF+NG+WVGVC+DSL F AELR KRRR+ELP QVEIKR
Sbjct: 575  LFDSGMEKVVNDTSSSLDGKDKVFLNGEWVGVCEDSLFFAAELRRKRRRRELPYQVEIKR 634

Query: 530  DEQQCEVRIFLDAGRILRPLLVVENLGRIKSSTGK-NFTFRSLLDSGIIELVGTEEEEDC 706
            DE + EVRIF DAGRILRPLLVVENL ++K+  GK N+ F+ LLD GI+EL+G EEEEDC
Sbjct: 635  DEHKGEVRIFTDAGRILRPLLVVENLFKLKAFKGKENYAFQPLLDKGIVELIGAEEEEDC 694

Query: 707  CTAWGIKYLLKDNEDDKPVKFTHCELDMSFLLGLSCGIIPFANHDHARRILYQSQKHSSQ 886
             TAWGI+YLL + E  +PVK+THCELDMSFLLGLSCGIIPFANHDHARR+LYQ+QKHS Q
Sbjct: 695  RTAWGIRYLLTEVEGKQPVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQ 754

Query: 887  AIGFPTTNPNIRVDTLSHQLFYPQRPLFRTMTSDCLGTPGY--GHNGILPRPELYNGQNA 1060
            AIGF TTNPNIRVDTLSHQ++YPQRPLF TMTSDCLG  G+  G N + P+PELYNGQNA
Sbjct: 755  AIGFSTTNPNIRVDTLSHQMYYPQRPLFHTMTSDCLGKSGFPLGQNRLEPKPELYNGQNA 814

Query: 1061 IVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNEELQVKRRPSDDKVNFGK 1240
            IVAVNVHLGYNQEDSLVMNRAS+ERGMFR+EH+RSYKAEVDN+E+Q KRR ++D VNFGK
Sbjct: 815  IVAVNVHLGYNQEDSLVMNRASIERGMFRTEHVRSYKAEVDNKEIQEKRRKAEDIVNFGK 874

Query: 1241 IQ 1246
             +
Sbjct: 875  TE 876