BLASTX nr result
ID: Phellodendron21_contig00026010
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00026010
(1564 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006467998.1 PREDICTED: polyadenylation and cleavage factor ho... 629 0.0
XP_006449074.1 hypothetical protein CICLE_v10014158mg [Citrus cl... 629 0.0
XP_006467996.1 PREDICTED: polyadenylation and cleavage factor ho... 629 0.0
XP_015382498.1 PREDICTED: polyadenylation and cleavage factor ho... 629 0.0
EOY28631.1 PCF11P-similar protein 4, putative isoform 2 [Theobro... 477 e-158
XP_007026008.2 PREDICTED: polyadenylation and cleavage factor ho... 477 e-155
EOY28630.1 PCF11P-similar protein 4, putative isoform 1 [Theobro... 477 e-155
OAY24701.1 hypothetical protein MANES_17G036600 [Manihot esculenta] 468 e-151
XP_017645981.1 PREDICTED: polyadenylation and cleavage factor ho... 465 e-150
KJB67159.1 hypothetical protein B456_010G178200 [Gossypium raimo... 462 e-149
XP_016753657.1 PREDICTED: polyadenylation and cleavage factor ho... 462 e-149
XP_012450328.1 PREDICTED: polyadenylation and cleavage factor ho... 462 e-149
XP_016683609.1 PREDICTED: polyadenylation and cleavage factor ho... 461 e-149
GAV85191.1 CTD_bind domain-containing protein [Cephalotus follic... 461 e-149
XP_002518518.1 PREDICTED: polyadenylation and cleavage factor ho... 460 e-148
XP_012091393.1 PREDICTED: polyadenylation and cleavage factor ho... 459 e-148
ONI10047.1 hypothetical protein PRUPE_4G024700 [Prunus persica] 457 e-147
XP_007213705.1 hypothetical protein PRUPE_ppa000684mg [Prunus pe... 457 e-147
XP_010655357.1 PREDICTED: polyadenylation and cleavage factor ho... 457 e-147
XP_018849826.1 PREDICTED: polyadenylation and cleavage factor ho... 451 e-146
>XP_006467998.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X5
[Citrus sinensis]
Length = 941
Score = 629 bits (1622), Expect = 0.0
Identities = 314/373 (84%), Positives = 328/373 (87%), Gaps = 14/373 (3%)
Frame = -3
Query: 1562 INASGNILNQGPSKSLYNPESKELSLMKPLQLRDQHATPNQQNQGQAQFLSQEARNYFLP 1383
INA+G ILNQGPSKSLYN ESKELSLMKP QL DQHATPNQQNQG+AQFLSQEA N FLP
Sbjct: 570 INAAGRILNQGPSKSLYNSESKELSLMKP-QLHDQHATPNQQNQGRAQFLSQEATNNFLP 628
Query: 1382 PIAASVPPHLLAPPLNHGYTQQGHNAVMGMVPSNP--------------NSSLHLQRXXX 1245
IAAS+PPH LAPPL+HGYTQ+GHNAVMGMV SNP NSSLHLQ
Sbjct: 629 SIAASMPPHPLAPPLSHGYTQRGHNAVMGMVSSNPVPAGQQPLHVQSIQNSSLHLQGRPA 688
Query: 1244 XXXXXXXXPASSQMIPGSQNTGLVVPNQQPGHAFSGLIGSLMAQGLISLTKQTPVQDSVG 1065
PASSQMIPGSQ+ GLVVP+QQPGHAFSGLI SLMAQGLISLT QTPVQDSVG
Sbjct: 689 PPLPPGPPPASSQMIPGSQSAGLVVPSQQPGHAFSGLISSLMAQGLISLTTQTPVQDSVG 748
Query: 1064 LEFNGDLHKMRHESAITILYANLPRQCTTCGQRFKCQEEHSSHMDWHVTKNRMSKNRKQK 885
LEFN DLHK+RHESAI+ LYANLPRQCTTCG RFKCQEEHSSHMDWHVTKNRMSKNRKQK
Sbjct: 749 LEFNADLHKLRHESAISSLYANLPRQCTTCGLRFKCQEEHSSHMDWHVTKNRMSKNRKQK 808
Query: 884 PSRKWFVSASMWLSGTEALGTDAVPGFLPAEPIVEKKDDEEMAVPADEDQNVCALCGEPF 705
PSRKWFVSASMWLSGTEALGTDA+PGFLPAEPIVEKKDDEEMAVPADEDQNVCALCGEPF
Sbjct: 809 PSRKWFVSASMWLSGTEALGTDAIPGFLPAEPIVEKKDDEEMAVPADEDQNVCALCGEPF 868
Query: 704 DDFYSDETEEWMYKGAVYMNVPTGSTSGMERSQLGPIVHAKCRSESTVIPSDDLKRDEGG 525
DDFYSDETEEWMYKGA+YMN P GST GMERSQLGPIVHAKCRSESTVIPSDD KRDEGG
Sbjct: 869 DDFYSDETEEWMYKGAIYMNAPNGSTEGMERSQLGPIVHAKCRSESTVIPSDDFKRDEGG 928
Query: 524 SSEDGSQRKRLRS 486
SSE+G+QRK+LRS
Sbjct: 929 SSEEGNQRKKLRS 941
>XP_006449074.1 hypothetical protein CICLE_v10014158mg [Citrus clementina] ESR62314.1
hypothetical protein CICLE_v10014158mg [Citrus
clementina]
Length = 975
Score = 629 bits (1623), Expect = 0.0
Identities = 314/373 (84%), Positives = 330/373 (88%), Gaps = 14/373 (3%)
Frame = -3
Query: 1562 INASGNILNQGPSKSLYNPESKELSLMKPLQLRDQHATPNQQNQGQAQFLSQEARNYFLP 1383
INA+G+ILNQG SKSLYN ESKELSLMKP QL DQHATPNQQNQG+AQFLSQEA N FLP
Sbjct: 604 INAAGSILNQGLSKSLYNSESKELSLMKP-QLHDQHATPNQQNQGRAQFLSQEATNKFLP 662
Query: 1382 PIAASVPPHLLAPPLNHGYTQQGHNAVMGMVPSNP--------------NSSLHLQRXXX 1245
IAAS+PPHLLAPPL+HGYTQ+GHNAVMGMVPSNP NSSLHLQ
Sbjct: 663 SIAASMPPHLLAPPLSHGYTQRGHNAVMGMVPSNPVPAGQQPLHVQSIQNSSLHLQGRPS 722
Query: 1244 XXXXXXXXPASSQMIPGSQNTGLVVPNQQPGHAFSGLIGSLMAQGLISLTKQTPVQDSVG 1065
PASSQMIPGSQ+ GLVVP+QQPGHAFSGLI SLMAQGLISLT QTPVQDSVG
Sbjct: 723 PPLPPGPPPASSQMIPGSQSAGLVVPSQQPGHAFSGLISSLMAQGLISLTTQTPVQDSVG 782
Query: 1064 LEFNGDLHKMRHESAITILYANLPRQCTTCGQRFKCQEEHSSHMDWHVTKNRMSKNRKQK 885
LEFN DLHK+RHESAI+ LYANLPRQCTTCG RFKCQEEHSSHMDWHVTKNRMSKNRKQK
Sbjct: 783 LEFNADLHKLRHESAISSLYANLPRQCTTCGLRFKCQEEHSSHMDWHVTKNRMSKNRKQK 842
Query: 884 PSRKWFVSASMWLSGTEALGTDAVPGFLPAEPIVEKKDDEEMAVPADEDQNVCALCGEPF 705
PSRKWFVSASMWLSGTEALGTDA+PGFLPAEPI+EKKDDEEMAVPADEDQNVCALCGEPF
Sbjct: 843 PSRKWFVSASMWLSGTEALGTDAIPGFLPAEPILEKKDDEEMAVPADEDQNVCALCGEPF 902
Query: 704 DDFYSDETEEWMYKGAVYMNVPTGSTSGMERSQLGPIVHAKCRSESTVIPSDDLKRDEGG 525
DDFYSDETEEWMYKGAVYMN P GST GM+RSQLGPIVHAKCRSESTVIPSDD KRDEGG
Sbjct: 903 DDFYSDETEEWMYKGAVYMNAPNGSTEGMDRSQLGPIVHAKCRSESTVIPSDDFKRDEGG 962
Query: 524 SSEDGSQRKRLRS 486
SSE+G+QRK+LRS
Sbjct: 963 SSEEGNQRKKLRS 975
>XP_006467996.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Citrus sinensis] XP_006467997.1 PREDICTED:
polyadenylation and cleavage factor homolog 4 isoform X3
[Citrus sinensis] XP_015382499.1 PREDICTED:
polyadenylation and cleavage factor homolog 4 isoform X4
[Citrus sinensis]
Length = 975
Score = 629 bits (1622), Expect = 0.0
Identities = 314/373 (84%), Positives = 328/373 (87%), Gaps = 14/373 (3%)
Frame = -3
Query: 1562 INASGNILNQGPSKSLYNPESKELSLMKPLQLRDQHATPNQQNQGQAQFLSQEARNYFLP 1383
INA+G ILNQGPSKSLYN ESKELSLMKP QL DQHATPNQQNQG+AQFLSQEA N FLP
Sbjct: 604 INAAGRILNQGPSKSLYNSESKELSLMKP-QLHDQHATPNQQNQGRAQFLSQEATNNFLP 662
Query: 1382 PIAASVPPHLLAPPLNHGYTQQGHNAVMGMVPSNP--------------NSSLHLQRXXX 1245
IAAS+PPH LAPPL+HGYTQ+GHNAVMGMV SNP NSSLHLQ
Sbjct: 663 SIAASMPPHPLAPPLSHGYTQRGHNAVMGMVSSNPVPAGQQPLHVQSIQNSSLHLQGRPA 722
Query: 1244 XXXXXXXXPASSQMIPGSQNTGLVVPNQQPGHAFSGLIGSLMAQGLISLTKQTPVQDSVG 1065
PASSQMIPGSQ+ GLVVP+QQPGHAFSGLI SLMAQGLISLT QTPVQDSVG
Sbjct: 723 PPLPPGPPPASSQMIPGSQSAGLVVPSQQPGHAFSGLISSLMAQGLISLTTQTPVQDSVG 782
Query: 1064 LEFNGDLHKMRHESAITILYANLPRQCTTCGQRFKCQEEHSSHMDWHVTKNRMSKNRKQK 885
LEFN DLHK+RHESAI+ LYANLPRQCTTCG RFKCQEEHSSHMDWHVTKNRMSKNRKQK
Sbjct: 783 LEFNADLHKLRHESAISSLYANLPRQCTTCGLRFKCQEEHSSHMDWHVTKNRMSKNRKQK 842
Query: 884 PSRKWFVSASMWLSGTEALGTDAVPGFLPAEPIVEKKDDEEMAVPADEDQNVCALCGEPF 705
PSRKWFVSASMWLSGTEALGTDA+PGFLPAEPIVEKKDDEEMAVPADEDQNVCALCGEPF
Sbjct: 843 PSRKWFVSASMWLSGTEALGTDAIPGFLPAEPIVEKKDDEEMAVPADEDQNVCALCGEPF 902
Query: 704 DDFYSDETEEWMYKGAVYMNVPTGSTSGMERSQLGPIVHAKCRSESTVIPSDDLKRDEGG 525
DDFYSDETEEWMYKGA+YMN P GST GMERSQLGPIVHAKCRSESTVIPSDD KRDEGG
Sbjct: 903 DDFYSDETEEWMYKGAIYMNAPNGSTEGMERSQLGPIVHAKCRSESTVIPSDDFKRDEGG 962
Query: 524 SSEDGSQRKRLRS 486
SSE+G+QRK+LRS
Sbjct: 963 SSEEGNQRKKLRS 975
>XP_015382498.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Citrus sinensis]
Length = 1012
Score = 629 bits (1622), Expect = 0.0
Identities = 314/373 (84%), Positives = 328/373 (87%), Gaps = 14/373 (3%)
Frame = -3
Query: 1562 INASGNILNQGPSKSLYNPESKELSLMKPLQLRDQHATPNQQNQGQAQFLSQEARNYFLP 1383
INA+G ILNQGPSKSLYN ESKELSLMKP QL DQHATPNQQNQG+AQFLSQEA N FLP
Sbjct: 641 INAAGRILNQGPSKSLYNSESKELSLMKP-QLHDQHATPNQQNQGRAQFLSQEATNNFLP 699
Query: 1382 PIAASVPPHLLAPPLNHGYTQQGHNAVMGMVPSNP--------------NSSLHLQRXXX 1245
IAAS+PPH LAPPL+HGYTQ+GHNAVMGMV SNP NSSLHLQ
Sbjct: 700 SIAASMPPHPLAPPLSHGYTQRGHNAVMGMVSSNPVPAGQQPLHVQSIQNSSLHLQGRPA 759
Query: 1244 XXXXXXXXPASSQMIPGSQNTGLVVPNQQPGHAFSGLIGSLMAQGLISLTKQTPVQDSVG 1065
PASSQMIPGSQ+ GLVVP+QQPGHAFSGLI SLMAQGLISLT QTPVQDSVG
Sbjct: 760 PPLPPGPPPASSQMIPGSQSAGLVVPSQQPGHAFSGLISSLMAQGLISLTTQTPVQDSVG 819
Query: 1064 LEFNGDLHKMRHESAITILYANLPRQCTTCGQRFKCQEEHSSHMDWHVTKNRMSKNRKQK 885
LEFN DLHK+RHESAI+ LYANLPRQCTTCG RFKCQEEHSSHMDWHVTKNRMSKNRKQK
Sbjct: 820 LEFNADLHKLRHESAISSLYANLPRQCTTCGLRFKCQEEHSSHMDWHVTKNRMSKNRKQK 879
Query: 884 PSRKWFVSASMWLSGTEALGTDAVPGFLPAEPIVEKKDDEEMAVPADEDQNVCALCGEPF 705
PSRKWFVSASMWLSGTEALGTDA+PGFLPAEPIVEKKDDEEMAVPADEDQNVCALCGEPF
Sbjct: 880 PSRKWFVSASMWLSGTEALGTDAIPGFLPAEPIVEKKDDEEMAVPADEDQNVCALCGEPF 939
Query: 704 DDFYSDETEEWMYKGAVYMNVPTGSTSGMERSQLGPIVHAKCRSESTVIPSDDLKRDEGG 525
DDFYSDETEEWMYKGA+YMN P GST GMERSQLGPIVHAKCRSESTVIPSDD KRDEGG
Sbjct: 940 DDFYSDETEEWMYKGAIYMNAPNGSTEGMERSQLGPIVHAKCRSESTVIPSDDFKRDEGG 999
Query: 524 SSEDGSQRKRLRS 486
SSE+G+QRK+LRS
Sbjct: 1000 SSEEGNQRKKLRS 1012
>EOY28631.1 PCF11P-similar protein 4, putative isoform 2 [Theobroma cacao]
Length = 733
Score = 477 bits (1227), Expect = e-158
Identities = 251/385 (65%), Positives = 282/385 (73%), Gaps = 26/385 (6%)
Frame = -3
Query: 1562 INASGNILNQGPSKSLYNPE------SKELSLMKPLQLRDQHATPNQQNQGQAQFL---- 1413
IN ++N+GP+K Y E SKE SL + QL DQ A +Q+NQ Q L
Sbjct: 350 INPINMVMNEGPNKRSYMAEQFDRFESKEQSLTRVPQLPDQRAALHQRNQMQVTSLQPHF 409
Query: 1412 --SQEARNYFLPPIAASVPPHLLAPPLNHGYTQQGHNAVMGMVPSNP------------- 1278
SQ+ R FL A +PP LLAP LNHGYT Q H AV+ MVPSNP
Sbjct: 410 LPSQDLRENFLSSATAPLPPRLLAPSLNHGYTPQMHGAVISMVPSNPIHVAQPPLPIPNM 469
Query: 1277 -NSSLHLQRXXXXXXXXXXXPASSQMIPGSQNTGLVVPNQQPGHAFSGLIGSLMAQGLIS 1101
SL LQ PAS QMIP +QN G ++PNQ +SGLI SLMAQGLIS
Sbjct: 470 PTVSLQLQGGALPPLPPGPPPAS-QMIPATQNAGPLLPNQAQSGPYSGLISSLMAQGLIS 528
Query: 1100 LTKQTPVQDSVGLEFNGDLHKMRHESAITILYANLPRQCTTCGQRFKCQEEHSSHMDWHV 921
LTK TP+QD VGLEFN DL K+RHES+I+ LYA+LPRQCTTCG RFK QEEHS+HMDWHV
Sbjct: 529 LTKPTPIQDPVGLEFNADLLKVRHESSISALYADLPRQCTTCGLRFKFQEEHSTHMDWHV 588
Query: 920 TKNRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAVPGFLPAEPIVEKKDDEEMAVPADE 741
T+NRMSKNRKQKPSRKWFVSASMWLSG EALGTDAVPGFLP E +VEKKDDEE+AVPADE
Sbjct: 589 TRNRMSKNRKQKPSRKWFVSASMWLSGAEALGTDAVPGFLPTENVVEKKDDEELAVPADE 648
Query: 740 DQNVCALCGEPFDDFYSDETEEWMYKGAVYMNVPTGSTSGMERSQLGPIVHAKCRSESTV 561
DQ+VCALCGEPFDDFYSDETEEWMY+GAVYMN P GS GM+RSQLGPIVHAKCRSES+V
Sbjct: 649 DQSVCALCGEPFDDFYSDETEEWMYRGAVYMNAPNGSIEGMDRSQLGPIVHAKCRSESSV 708
Query: 560 IPSDDLKRDEGGSSEDGSQRKRLRS 486
+PS+D R +GG+SED SQRKRLRS
Sbjct: 709 VPSEDFVRCDGGNSEDSSQRKRLRS 733
>XP_007026008.2 PREDICTED: polyadenylation and cleavage factor homolog 4 [Theobroma
cacao]
Length = 1001
Score = 477 bits (1227), Expect = e-155
Identities = 251/385 (65%), Positives = 282/385 (73%), Gaps = 26/385 (6%)
Frame = -3
Query: 1562 INASGNILNQGPSKSLYNPE------SKELSLMKPLQLRDQHATPNQQNQGQAQFL---- 1413
IN ++N+GP+K Y E SKE SL + QL DQ A +Q+NQ Q L
Sbjct: 618 INPINMVMNEGPNKRSYMAEQFDRFESKEQSLTRVPQLPDQRAALHQRNQMQVTSLQPHF 677
Query: 1412 --SQEARNYFLPPIAASVPPHLLAPPLNHGYTQQGHNAVMGMVPSNP------------- 1278
SQ+ R FL A +PP LLAP LNHGYT Q H AV+ MVPSNP
Sbjct: 678 LPSQDLRENFLSSATAPLPPRLLAPSLNHGYTPQMHGAVISMVPSNPIHVAQPPLPIPNM 737
Query: 1277 -NSSLHLQRXXXXXXXXXXXPASSQMIPGSQNTGLVVPNQQPGHAFSGLIGSLMAQGLIS 1101
SL LQ PAS QMIP +QN G ++PNQ +SGLI SLMAQGLIS
Sbjct: 738 PTVSLQLQGGALPPLPPGPPPAS-QMIPATQNAGPLLPNQAQSGPYSGLISSLMAQGLIS 796
Query: 1100 LTKQTPVQDSVGLEFNGDLHKMRHESAITILYANLPRQCTTCGQRFKCQEEHSSHMDWHV 921
LTK TP+QD VGLEFN DL K+RHES+I+ LYA+LPRQCTTCG RFK QEEHS+HMDWHV
Sbjct: 797 LTKPTPIQDPVGLEFNADLLKVRHESSISALYADLPRQCTTCGLRFKFQEEHSTHMDWHV 856
Query: 920 TKNRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAVPGFLPAEPIVEKKDDEEMAVPADE 741
T+NRMSKNRKQKPSRKWFVSASMWLSG EALGTDAVPGFLP E +VEKKDDEE+AVPADE
Sbjct: 857 TRNRMSKNRKQKPSRKWFVSASMWLSGAEALGTDAVPGFLPTENVVEKKDDEELAVPADE 916
Query: 740 DQNVCALCGEPFDDFYSDETEEWMYKGAVYMNVPTGSTSGMERSQLGPIVHAKCRSESTV 561
DQ+VCALCGEPFDDFYSDETEEWMY+GAVYMN P GS GM+RSQLGPIVHAKCRSES+V
Sbjct: 917 DQSVCALCGEPFDDFYSDETEEWMYRGAVYMNAPNGSIEGMDRSQLGPIVHAKCRSESSV 976
Query: 560 IPSDDLKRDEGGSSEDGSQRKRLRS 486
+PS+D R +GG+SED SQRKRLRS
Sbjct: 977 VPSEDFVRCDGGNSEDSSQRKRLRS 1001
>EOY28630.1 PCF11P-similar protein 4, putative isoform 1 [Theobroma cacao]
Length = 1004
Score = 477 bits (1227), Expect = e-155
Identities = 251/385 (65%), Positives = 282/385 (73%), Gaps = 26/385 (6%)
Frame = -3
Query: 1562 INASGNILNQGPSKSLYNPE------SKELSLMKPLQLRDQHATPNQQNQGQAQFL---- 1413
IN ++N+GP+K Y E SKE SL + QL DQ A +Q+NQ Q L
Sbjct: 621 INPINMVMNEGPNKRSYMAEQFDRFESKEQSLTRVPQLPDQRAALHQRNQMQVTSLQPHF 680
Query: 1412 --SQEARNYFLPPIAASVPPHLLAPPLNHGYTQQGHNAVMGMVPSNP------------- 1278
SQ+ R FL A +PP LLAP LNHGYT Q H AV+ MVPSNP
Sbjct: 681 LPSQDLRENFLSSATAPLPPRLLAPSLNHGYTPQMHGAVISMVPSNPIHVAQPPLPIPNM 740
Query: 1277 -NSSLHLQRXXXXXXXXXXXPASSQMIPGSQNTGLVVPNQQPGHAFSGLIGSLMAQGLIS 1101
SL LQ PAS QMIP +QN G ++PNQ +SGLI SLMAQGLIS
Sbjct: 741 PTVSLQLQGGALPPLPPGPPPAS-QMIPATQNAGPLLPNQAQSGPYSGLISSLMAQGLIS 799
Query: 1100 LTKQTPVQDSVGLEFNGDLHKMRHESAITILYANLPRQCTTCGQRFKCQEEHSSHMDWHV 921
LTK TP+QD VGLEFN DL K+RHES+I+ LYA+LPRQCTTCG RFK QEEHS+HMDWHV
Sbjct: 800 LTKPTPIQDPVGLEFNADLLKVRHESSISALYADLPRQCTTCGLRFKFQEEHSTHMDWHV 859
Query: 920 TKNRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAVPGFLPAEPIVEKKDDEEMAVPADE 741
T+NRMSKNRKQKPSRKWFVSASMWLSG EALGTDAVPGFLP E +VEKKDDEE+AVPADE
Sbjct: 860 TRNRMSKNRKQKPSRKWFVSASMWLSGAEALGTDAVPGFLPTENVVEKKDDEELAVPADE 919
Query: 740 DQNVCALCGEPFDDFYSDETEEWMYKGAVYMNVPTGSTSGMERSQLGPIVHAKCRSESTV 561
DQ+VCALCGEPFDDFYSDETEEWMY+GAVYMN P GS GM+RSQLGPIVHAKCRSES+V
Sbjct: 920 DQSVCALCGEPFDDFYSDETEEWMYRGAVYMNAPNGSIEGMDRSQLGPIVHAKCRSESSV 979
Query: 560 IPSDDLKRDEGGSSEDGSQRKRLRS 486
+PS+D R +GG+SED SQRKRLRS
Sbjct: 980 VPSEDFVRCDGGNSEDSSQRKRLRS 1004
>OAY24701.1 hypothetical protein MANES_17G036600 [Manihot esculenta]
Length = 1027
Score = 468 bits (1204), Expect = e-151
Identities = 249/378 (65%), Positives = 279/378 (73%), Gaps = 26/378 (6%)
Frame = -3
Query: 1541 LNQGPSKSLYNPE-------SKELSLMKPLQLRDQHATPNQQNQGQAQ------FLSQEA 1401
+NQG KS + E SK+LSLMK L Q N+QNQ A LS EA
Sbjct: 652 VNQGLHKSSFATEQQFNGLESKDLSLMKRPLLPSQRTVQNKQNQAHANPFQPQFLLSNEA 711
Query: 1400 RNYFLPPIAASVPPHLLAPPLNHGYTQQGHNAVMGMVPSN--PN-----------SSLHL 1260
R L P ASVP H +A PLNHGY +GH AVM M PSN P+ ++LH
Sbjct: 712 REN-LQPSVASVPSHPVALPLNHGYAVRGHGAVMSMAPSNIVPSRQFPLPVNNILNTLHS 770
Query: 1259 QRXXXXXXXXXXXPASSQMIPGSQNTGLVVPNQQPGHAFSGLIGSLMAQGLISLTKQTPV 1080
Q PAS Q+I QN G V +Q PG AFSGLI SLMAQGLISLT QTPV
Sbjct: 771 QGGVRPPLPPGPPPAS-QVILNPQNAGAVASSQPPGGAFSGLINSLMAQGLISLTNQTPV 829
Query: 1079 QDSVGLEFNGDLHKMRHESAITILYANLPRQCTTCGQRFKCQEEHSSHMDWHVTKNRMSK 900
QD+VGLEFN DL K+R+ES I+ LYA+LPRQCTTCG RFKCQEEHSSHMDWHVTKNRMSK
Sbjct: 830 QDAVGLEFNADLLKVRYESGISALYADLPRQCTTCGLRFKCQEEHSSHMDWHVTKNRMSK 889
Query: 899 NRKQKPSRKWFVSASMWLSGTEALGTDAVPGFLPAEPIVEKKDDEEMAVPADEDQNVCAL 720
NRKQKPSRKWFVSASMWLSG EALGTDAVPGFLP E IVEKKDDEEMAVPADE+QN CAL
Sbjct: 890 NRKQKPSRKWFVSASMWLSGAEALGTDAVPGFLPTETIVEKKDDEEMAVPADEEQNACAL 949
Query: 719 CGEPFDDFYSDETEEWMYKGAVYMNVPTGSTSGMERSQLGPIVHAKCRSESTVIPSDDLK 540
CGEPFDDFYSDE EEWMYKGAVY+N P G +G++RS+LGPIVHAKCRSES+V+PSDD +
Sbjct: 950 CGEPFDDFYSDEMEEWMYKGAVYLNAPDGLIAGLDRSELGPIVHAKCRSESSVVPSDDFR 1009
Query: 539 RDEGGSSEDGSQRKRLRS 486
+DEGG++E+GSQRKR+RS
Sbjct: 1010 QDEGGNTEEGSQRKRMRS 1027
>XP_017645981.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Gossypium arboreum] KHG24664.1 Pre-mRNA cleavage complex
2 Pcf11 [Gossypium arboreum]
Length = 1004
Score = 465 bits (1196), Expect = e-150
Identities = 244/383 (63%), Positives = 276/383 (72%), Gaps = 24/383 (6%)
Frame = -3
Query: 1562 INASGNILNQGPSKSLYNPE------SKELSLMKPLQLRDQHATPNQQNQG----QAQFL 1413
+N +NQG +K Y PE SKE SL QL Q Q+N Q F
Sbjct: 623 LNPINAAMNQGQNKHPYMPEQFDNFESKEQSLTTVPQLPGQRPALRQRNSLHGSLQLHFT 682
Query: 1412 SQEARNYFLPPIAASVPPHLLAPPLNHGYTQQGHNAVMGMVPSNP--------------N 1275
EAR+ FL +PP LLAP +NHGY+ Q H A + MVPSNP
Sbjct: 683 PHEARDSFLSSATGPLPPRLLAPSMNHGYSPQMHGAGISMVPSNPVPVAQPPLSIPNMPT 742
Query: 1274 SSLHLQRXXXXXXXXXXXPASSQMIPGSQNTGLVVPNQQPGHAFSGLIGSLMAQGLISLT 1095
SLHLQ PAS QM+P +QN G ++PNQ G F+GLI SLMAQGLISLT
Sbjct: 743 GSLHLQGGAIPPLPPGPRPAS-QMMPATQNAGPLLPNQPQGGPFTGLISSLMAQGLISLT 801
Query: 1094 KQTPVQDSVGLEFNGDLHKMRHESAITILYANLPRQCTTCGQRFKCQEEHSSHMDWHVTK 915
K TP+QDSVGLEF+ DL K+RHESAI+ LYA+LPRQCTTCG RFK QEEHS+HMDWHVT+
Sbjct: 802 KPTPIQDSVGLEFDADLLKVRHESAISALYADLPRQCTTCGLRFKFQEEHSTHMDWHVTR 861
Query: 914 NRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAVPGFLPAEPIVEKKDDEEMAVPADEDQ 735
NRMSKNRKQKPSRKWFVSASMWLSG EALGTDAVPGFLP E IVEKKDDEE+AVPADEDQ
Sbjct: 862 NRMSKNRKQKPSRKWFVSASMWLSGAEALGTDAVPGFLPTEDIVEKKDDEELAVPADEDQ 921
Query: 734 NVCALCGEPFDDFYSDETEEWMYKGAVYMNVPTGSTSGMERSQLGPIVHAKCRSESTVIP 555
N+CALCGEPFDDFYSDETEEWMY+GAVYMN P+GS G++RSQLGPIVHAKCRSES+V+P
Sbjct: 922 NLCALCGEPFDDFYSDETEEWMYRGAVYMNAPSGSVEGIDRSQLGPIVHAKCRSESSVVP 981
Query: 554 SDDLKRDEGGSSEDGSQRKRLRS 486
+D R +GG+ ED SQRKRLRS
Sbjct: 982 PEDFVRYDGGNPEDSSQRKRLRS 1004
>KJB67159.1 hypothetical protein B456_010G178200 [Gossypium raimondii]
Length = 980
Score = 462 bits (1188), Expect = e-149
Identities = 241/383 (62%), Positives = 274/383 (71%), Gaps = 24/383 (6%)
Frame = -3
Query: 1562 INASGNILNQGPSKSLYNPE------SKELSLMKPLQLRDQHATPNQQNQG----QAQFL 1413
+N +NQG +K Y PE SKE SL QL Q Q+N Q F
Sbjct: 599 LNPINAAMNQGQNKHPYMPEQFDNFESKEQSLKTVPQLPGQRPALQQRNSLHGSLQPHFP 658
Query: 1412 SQEARNYFLPPIAASVPPHLLAPPLNHGYTQQGHNAVMGMVPSNP--------------N 1275
+AR+ FL +PP LLAP +NHGY+ Q H A + MVPSNP
Sbjct: 659 PNDARDSFLSSATGPLPPRLLAPSMNHGYSPQMHGAGISMVPSNPIPVAQPPLSIPNMPT 718
Query: 1274 SSLHLQRXXXXXXXXXXXPASSQMIPGSQNTGLVVPNQQPGHAFSGLIGSLMAQGLISLT 1095
SLHLQ +SQM+P +QN G ++PNQ G F+GLI SLMAQGLISLT
Sbjct: 719 GSLHLQ-GGAMPPLPPGPRPTSQMMPAAQNAGPLLPNQPQGGPFTGLISSLMAQGLISLT 777
Query: 1094 KQTPVQDSVGLEFNGDLHKMRHESAITILYANLPRQCTTCGQRFKCQEEHSSHMDWHVTK 915
K TP+QDSVGLEF+ DL K+RHESAI+ LYA+LPRQCTTCG RFK QEEHS+HMDWHVT+
Sbjct: 778 KPTPIQDSVGLEFDADLLKVRHESAISALYADLPRQCTTCGLRFKFQEEHSTHMDWHVTR 837
Query: 914 NRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAVPGFLPAEPIVEKKDDEEMAVPADEDQ 735
NRMSKNRKQKPSRKWFVSASMWLSG EALGTDAVPGFLP E IVEKKDDEE+AVPADEDQ
Sbjct: 838 NRMSKNRKQKPSRKWFVSASMWLSGAEALGTDAVPGFLPTEDIVEKKDDEELAVPADEDQ 897
Query: 734 NVCALCGEPFDDFYSDETEEWMYKGAVYMNVPTGSTSGMERSQLGPIVHAKCRSESTVIP 555
N+CALCGEPFDDFYSDETEEWMY+GAVYMN P GS G++RSQLGPIVHAKCRSES+V+P
Sbjct: 898 NLCALCGEPFDDFYSDETEEWMYRGAVYMNAPNGSVEGIDRSQLGPIVHAKCRSESSVVP 957
Query: 554 SDDLKRDEGGSSEDGSQRKRLRS 486
+D R +GG+ ED SQRKRLRS
Sbjct: 958 PEDFVRYDGGNPEDSSQRKRLRS 980
>XP_016753657.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X2 [Gossypium hirsutum]
Length = 1004
Score = 462 bits (1188), Expect = e-149
Identities = 243/383 (63%), Positives = 275/383 (71%), Gaps = 24/383 (6%)
Frame = -3
Query: 1562 INASGNILNQGPSKSLYNPE------SKELSLMKPLQLRDQHATPNQQNQG----QAQFL 1413
+N +NQG +K Y PE SKE SL QL Q Q+N Q F
Sbjct: 623 LNPINAAMNQGQNKHPYMPEQFDNFESKEQSLTTVPQLPGQRPALRQRNSLHGSLQLHFT 682
Query: 1412 SQEARNYFLPPIAASVPPHLLAPPLNHGYTQQGHNAVMGMVPSNP--------------N 1275
EAR+ FL +PP LLAP +NHGY+ Q H A + MVPSNP
Sbjct: 683 PHEARDSFLSSATGPLPPRLLAPSMNHGYSPQMHGAGISMVPSNPVPVAQPPLSIPNMPT 742
Query: 1274 SSLHLQRXXXXXXXXXXXPASSQMIPGSQNTGLVVPNQQPGHAFSGLIGSLMAQGLISLT 1095
SLHLQ PAS QM+P +QN G ++PNQ G F+GLI SLMAQGLISLT
Sbjct: 743 GSLHLQGGAIPPLPSGPRPAS-QMMPATQNAGPLLPNQPQGGPFTGLISSLMAQGLISLT 801
Query: 1094 KQTPVQDSVGLEFNGDLHKMRHESAITILYANLPRQCTTCGQRFKCQEEHSSHMDWHVTK 915
K TP+QDSVGLEF+ DL K+RHESAI+ LYA+LPRQCTTCG RFK QEEHS+HMDWHVT+
Sbjct: 802 KPTPIQDSVGLEFDADLLKVRHESAISALYADLPRQCTTCGLRFKFQEEHSTHMDWHVTR 861
Query: 914 NRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAVPGFLPAEPIVEKKDDEEMAVPADEDQ 735
NRMSKNRKQKPSRKWFVSASMWLSG EALGTDAVPGFLP E IVEKKDDEE+AV ADEDQ
Sbjct: 862 NRMSKNRKQKPSRKWFVSASMWLSGAEALGTDAVPGFLPTEDIVEKKDDEELAVSADEDQ 921
Query: 734 NVCALCGEPFDDFYSDETEEWMYKGAVYMNVPTGSTSGMERSQLGPIVHAKCRSESTVIP 555
N+CALCGEPFDDFYSDETEEWMY+GAVYMN P+GS G++RSQLGPIVHAKCRSES+V+P
Sbjct: 922 NLCALCGEPFDDFYSDETEEWMYRGAVYMNAPSGSVEGIDRSQLGPIVHAKCRSESSVVP 981
Query: 554 SDDLKRDEGGSSEDGSQRKRLRS 486
+D R +GG+ ED SQRKRLRS
Sbjct: 982 PEDFVRYDGGNPEDSSQRKRLRS 1004
>XP_012450328.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Gossypium raimondii] KJB67156.1 hypothetical protein
B456_010G178200 [Gossypium raimondii]
Length = 1004
Score = 462 bits (1188), Expect = e-149
Identities = 241/383 (62%), Positives = 274/383 (71%), Gaps = 24/383 (6%)
Frame = -3
Query: 1562 INASGNILNQGPSKSLYNPE------SKELSLMKPLQLRDQHATPNQQNQG----QAQFL 1413
+N +NQG +K Y PE SKE SL QL Q Q+N Q F
Sbjct: 623 LNPINAAMNQGQNKHPYMPEQFDNFESKEQSLKTVPQLPGQRPALQQRNSLHGSLQPHFP 682
Query: 1412 SQEARNYFLPPIAASVPPHLLAPPLNHGYTQQGHNAVMGMVPSNP--------------N 1275
+AR+ FL +PP LLAP +NHGY+ Q H A + MVPSNP
Sbjct: 683 PNDARDSFLSSATGPLPPRLLAPSMNHGYSPQMHGAGISMVPSNPIPVAQPPLSIPNMPT 742
Query: 1274 SSLHLQRXXXXXXXXXXXPASSQMIPGSQNTGLVVPNQQPGHAFSGLIGSLMAQGLISLT 1095
SLHLQ +SQM+P +QN G ++PNQ G F+GLI SLMAQGLISLT
Sbjct: 743 GSLHLQ-GGAMPPLPPGPRPTSQMMPAAQNAGPLLPNQPQGGPFTGLISSLMAQGLISLT 801
Query: 1094 KQTPVQDSVGLEFNGDLHKMRHESAITILYANLPRQCTTCGQRFKCQEEHSSHMDWHVTK 915
K TP+QDSVGLEF+ DL K+RHESAI+ LYA+LPRQCTTCG RFK QEEHS+HMDWHVT+
Sbjct: 802 KPTPIQDSVGLEFDADLLKVRHESAISALYADLPRQCTTCGLRFKFQEEHSTHMDWHVTR 861
Query: 914 NRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAVPGFLPAEPIVEKKDDEEMAVPADEDQ 735
NRMSKNRKQKPSRKWFVSASMWLSG EALGTDAVPGFLP E IVEKKDDEE+AVPADEDQ
Sbjct: 862 NRMSKNRKQKPSRKWFVSASMWLSGAEALGTDAVPGFLPTEDIVEKKDDEELAVPADEDQ 921
Query: 734 NVCALCGEPFDDFYSDETEEWMYKGAVYMNVPTGSTSGMERSQLGPIVHAKCRSESTVIP 555
N+CALCGEPFDDFYSDETEEWMY+GAVYMN P GS G++RSQLGPIVHAKCRSES+V+P
Sbjct: 922 NLCALCGEPFDDFYSDETEEWMYRGAVYMNAPNGSVEGIDRSQLGPIVHAKCRSESSVVP 981
Query: 554 SDDLKRDEGGSSEDGSQRKRLRS 486
+D R +GG+ ED SQRKRLRS
Sbjct: 982 PEDFVRYDGGNPEDSSQRKRLRS 1004
>XP_016683609.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X2 [Gossypium hirsutum]
Length = 1004
Score = 461 bits (1187), Expect = e-149
Identities = 243/383 (63%), Positives = 275/383 (71%), Gaps = 24/383 (6%)
Frame = -3
Query: 1562 INASGNILNQGPSKSLYNPE------SKELSLMKPLQLRDQHATPNQQNQG----QAQFL 1413
+N +NQG +K Y PE SKE SL QL Q Q+N Q F
Sbjct: 623 LNPINAAMNQGQNKHPYMPEQFDNFESKEQSLKTVPQLPGQRPALQQRNSLHGSLQPHFP 682
Query: 1412 SQEARNYFLPPIAASVPPHLLAPPLNHGYTQQGHNAVMGMVPSN--------------PN 1275
EAR+ FL +PP LLAP +NHGY+ Q H A + MVPSN P
Sbjct: 683 PHEARDSFLSSATGPLPPRLLAPSMNHGYSPQMHGASISMVPSNLVPVAQPPLSIPNMPT 742
Query: 1274 SSLHLQRXXXXXXXXXXXPASSQMIPGSQNTGLVVPNQQPGHAFSGLIGSLMAQGLISLT 1095
SLHLQ PAS QM+P +QN G ++PNQ G F+GLI SLMAQGLISLT
Sbjct: 743 GSLHLQGGAMPPLPPGPRPAS-QMMPAAQNAGPLLPNQPQGGPFTGLISSLMAQGLISLT 801
Query: 1094 KQTPVQDSVGLEFNGDLHKMRHESAITILYANLPRQCTTCGQRFKCQEEHSSHMDWHVTK 915
K TP+QDSVGLEF+ DL K+RHESAI+ LYA+LPRQCTTCG RFK QEEHS+HMDWHVT+
Sbjct: 802 KPTPIQDSVGLEFDADLLKVRHESAISALYADLPRQCTTCGLRFKFQEEHSTHMDWHVTR 861
Query: 914 NRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAVPGFLPAEPIVEKKDDEEMAVPADEDQ 735
NRMSKNRKQKPSRKWFVSASMWLSG EALGTDAVPGFLP E IVEKKDDEE+AV ADEDQ
Sbjct: 862 NRMSKNRKQKPSRKWFVSASMWLSGAEALGTDAVPGFLPTEDIVEKKDDEELAVSADEDQ 921
Query: 734 NVCALCGEPFDDFYSDETEEWMYKGAVYMNVPTGSTSGMERSQLGPIVHAKCRSESTVIP 555
N+CALCGEPFDDFYSDETEEWMY+GAVYMN P+GS G++RSQLGPIVHAKCRSES+V+P
Sbjct: 922 NLCALCGEPFDDFYSDETEEWMYRGAVYMNAPSGSVEGIDRSQLGPIVHAKCRSESSVVP 981
Query: 554 SDDLKRDEGGSSEDGSQRKRLRS 486
+D R +GG+ ED SQRKRLRS
Sbjct: 982 PEDFVRYDGGNPEDSSQRKRLRS 1004
>GAV85191.1 CTD_bind domain-containing protein [Cephalotus follicularis]
Length = 1006
Score = 461 bits (1185), Expect = e-149
Identities = 237/382 (62%), Positives = 280/382 (73%), Gaps = 23/382 (6%)
Frame = -3
Query: 1562 INASGNILNQGPSKSLYNPE-------SKELSLMKPLQLRDQHATPNQQNQGQAQFLSQE 1404
IN G ++N+GP+KS + PE SKEL L+KP +L + QQN Q L +
Sbjct: 630 INTGGIVMNRGPNKSHFMPEQQFDIFESKELGLLKPPRLLNHQTALKQQNHAQVTPLQSQ 689
Query: 1403 ARNYFLPPI-------AASVPPHLLAPPLNHGYTQQGHNAVMG---------MVPSNPNS 1272
+LP + +A+ P HLLAPPLN GY+ Q HN+V +PS P +
Sbjct: 690 ----YLPYVEGEREFPSAAAPAHLLAPPLNQGYSPQQHNSVSNPVRGLQYPLQIPSVP-T 744
Query: 1271 SLHLQRXXXXXXXXXXXPASSQMIPGSQNTGLVVPNQQPGHAFSGLIGSLMAQGLISLTK 1092
SLH+ P SQM+P SQN ++ NQ P AFSGLI SLM+QGLISLTK
Sbjct: 745 SLHVPGGAFPPLPPGPPPTLSQMLPFSQNAAVLGANQPPSSAFSGLINSLMSQGLISLTK 804
Query: 1091 QTPVQDSVGLEFNGDLHKMRHESAITILYANLPRQCTTCGQRFKCQEEHSSHMDWHVTKN 912
QTP QD VGLEFN D+ K+RHESAI+ LYA+LPRQCTTCG RFK QEEHSSHMDWHVT+N
Sbjct: 805 QTPEQDLVGLEFNVDILKLRHESAISALYADLPRQCTTCGLRFKSQEEHSSHMDWHVTRN 864
Query: 911 RMSKNRKQKPSRKWFVSASMWLSGTEALGTDAVPGFLPAEPIVEKKDDEEMAVPADEDQN 732
RMSKNRKQKPSRKWFVSA+MWLSG EALGTDAVPGFLP E IVEKKDD+E +VPADEDQN
Sbjct: 865 RMSKNRKQKPSRKWFVSATMWLSGVEALGTDAVPGFLPTETIVEKKDDKEFSVPADEDQN 924
Query: 731 VCALCGEPFDDFYSDETEEWMYKGAVYMNVPTGSTSGMERSQLGPIVHAKCRSESTVIPS 552
+CALCGEPFDDFYSDETEEWMY+GAVYMN P GST+G +R QLGPIVHAKCRS+S+V+P
Sbjct: 925 ICALCGEPFDDFYSDETEEWMYRGAVYMNAPDGSTAGTDRFQLGPIVHAKCRSDSSVVPP 984
Query: 551 DDLKRDEGGSSEDGSQRKRLRS 486
+D DEGG++E+GSQ++RLRS
Sbjct: 985 EDFGHDEGGNTEEGSQKERLRS 1006
>XP_002518518.1 PREDICTED: polyadenylation and cleavage factor homolog 4 [Ricinus
communis] EEF43905.1 conserved hypothetical protein
[Ricinus communis]
Length = 1023
Score = 460 bits (1184), Expect = e-148
Identities = 244/378 (64%), Positives = 273/378 (72%), Gaps = 20/378 (5%)
Frame = -3
Query: 1559 NASGNILNQGPSKS-------LYNPESKELSLMKPLQLRDQHATPNQQNQGQAQFLSQEA 1401
NAS +NQG KS L ESKE SL K L QHA NQQNQGQ +
Sbjct: 650 NASNTAVNQGFQKSSFLSEQQLNGLESKEHSLTKQPLLPSQHAAMNQQNQGQVNPFQPQR 709
Query: 1400 RNYFLPPIAASVPPHLLAPPLNHGYTQQGHNAVMGMVPSNPNSSL-------------HL 1260
N+ PP AS+PPH LAP +H Y Q H + M + SN SS+ HL
Sbjct: 710 ENF--PPSVASLPPHPLAPTFDHRYVTQAHGSAMSRIHSNLVSSMPLPLPVNNIPNTMHL 767
Query: 1259 QRXXXXXXXXXXXPASSQMIPGSQNTGLVVPNQQPGHAFSGLIGSLMAQGLISLTKQTPV 1080
Q PAS MIP QN G V NQ G AFSGLI SL+AQGLISL KQTPV
Sbjct: 768 QVGVRPPLPPGPPPAS-HMIPIPQNAGPVASNQPAGGAFSGLINSLVAQGLISL-KQTPV 825
Query: 1079 QDSVGLEFNGDLHKMRHESAITILYANLPRQCTTCGQRFKCQEEHSSHMDWHVTKNRMSK 900
QDSVGLEFN DL K+RHESAI+ LYA+LPRQCTTCG RFKCQE+HSSHMDWHVT+NRMSK
Sbjct: 826 QDSVGLEFNADLLKVRHESAISALYADLPRQCTTCGLRFKCQEDHSSHMDWHVTRNRMSK 885
Query: 899 NRKQKPSRKWFVSASMWLSGTEALGTDAVPGFLPAEPIVEKKDDEEMAVPADEDQNVCAL 720
NRKQKPSRKWFVSA+MWL G EALGTDAVPGFLP E +VEKKDDEEMAVPADE+QN CAL
Sbjct: 886 NRKQKPSRKWFVSATMWLRGAEALGTDAVPGFLPTEAVVEKKDDEEMAVPADEEQNACAL 945
Query: 719 CGEPFDDFYSDETEEWMYKGAVYMNVPTGSTSGMERSQLGPIVHAKCRSESTVIPSDDLK 540
CGEPFDDFYSDETEEWMYKGAVY+N P+GST+ M+RSQLGPIVHAKCRSES+V P +D++
Sbjct: 946 CGEPFDDFYSDETEEWMYKGAVYLNAPSGSTASMDRSQLGPIVHAKCRSESSVAPPEDIR 1005
Query: 539 RDEGGSSEDGSQRKRLRS 486
+EG +E+ SQRKR+RS
Sbjct: 1006 SNEGPDTEEASQRKRMRS 1023
>XP_012091393.1 PREDICTED: polyadenylation and cleavage factor homolog 4 [Jatropha
curcas] KDP20781.1 hypothetical protein JCGZ_21252
[Jatropha curcas]
Length = 1029
Score = 459 bits (1182), Expect = e-148
Identities = 249/381 (65%), Positives = 271/381 (71%), Gaps = 23/381 (6%)
Frame = -3
Query: 1559 NASGNILNQGPSKSLYNPE-------SKELSLMKPLQLRDQHATPNQQNQGQA-----QF 1416
NA ++NQG +S ++ E S E SL K L +HAT NQQNQ Q QF
Sbjct: 650 NARNTVVNQGLQQSTFSSEQQFNGFESMEPSLTKQPLLPSRHATLNQQNQAQVNHFQPQF 709
Query: 1415 L-SQEARNYFLPPIAASVPPHLLAPPLNHGYTQQGHNAVMGMVPSNP----------NSS 1269
L S EAR F P +S+P L+ + QGH A M MV SNP N
Sbjct: 710 LPSNEARENF-PLSISSLPHQTRVSTLDPVHATQGHGAAMSMVRSNPVPFMLPLPVNNIP 768
Query: 1268 LHLQRXXXXXXXXXXXPASSQMIPGSQNTGLVVPNQQPGHAFSGLIGSLMAQGLISLTKQ 1089
LQ P +QMI QN G V PNQ PG AFSGLIGSLMAQGLISLTKQ
Sbjct: 769 NTLQPHAGTRPPLPPGPHPAQMIHVPQNVGPVAPNQPPGSAFSGLIGSLMAQGLISLTKQ 828
Query: 1088 TPVQDSVGLEFNGDLHKMRHESAITILYANLPRQCTTCGQRFKCQEEHSSHMDWHVTKNR 909
TP QDSVGLEFN DL K+RHESAI+ LYA+LPRQCTTCG RFKCQEEHSSHMDWHVTKNR
Sbjct: 829 TPGQDSVGLEFNADLIKVRHESAISALYADLPRQCTTCGLRFKCQEEHSSHMDWHVTKNR 888
Query: 908 MSKNRKQKPSRKWFVSASMWLSGTEALGTDAVPGFLPAEPIVEKKDDEEMAVPADEDQNV 729
MSKNRK KPSRKWFV SMWLSG EALGTDAVPGFLP E +VEKKDDEEMAVPADE+QN
Sbjct: 889 MSKNRKHKPSRKWFVDTSMWLSGAEALGTDAVPGFLPTESVVEKKDDEEMAVPADEEQNA 948
Query: 728 CALCGEPFDDFYSDETEEWMYKGAVYMNVPTGSTSGMERSQLGPIVHAKCRSESTVIPSD 549
CALCGEPFDDFYSDETEEWMYKGAVYMN P GST+GMERSQLGPIVHAKCRSES+V P +
Sbjct: 949 CALCGEPFDDFYSDETEEWMYKGAVYMNAPNGSTAGMERSQLGPIVHAKCRSESSVAPPE 1008
Query: 548 DLKRDEGGSSEDGSQRKRLRS 486
D + D+GG SE+ S RKRLRS
Sbjct: 1009 DFRCDDGGDSEETSHRKRLRS 1029
>ONI10047.1 hypothetical protein PRUPE_4G024700 [Prunus persica]
Length = 1017
Score = 457 bits (1177), Expect = e-147
Identities = 247/383 (64%), Positives = 273/383 (71%), Gaps = 24/383 (6%)
Frame = -3
Query: 1562 INASGNILNQGPSKSLYNPE-------SKELSLMKPLQLRDQHATP---NQQNQGQA--- 1422
IN S + NQ P SLY PE +K L K QL Q+A P NQ+NQ QA
Sbjct: 635 INYSNTVKNQAPYNSLYVPEQQLDGYENKLLRSTKLTQLTSQNARPMPVNQRNQVQASPL 694
Query: 1421 --QFLS-QEARNYFLPPIAASVPPHLLAPPLNHGYTQQGHNAVMGMVPSNP--------N 1275
QFL QEAR F+ S PP+L P LNH YT QGH + V +NP N
Sbjct: 695 QPQFLPPQEARENFISSAETSGPPYLGLPSLNHRYTLQGHGGAVSTVMANPVPRIPYVPN 754
Query: 1274 SSLHLQRXXXXXXXXXXXPASSQMIPGSQNTGLVVPNQQPGHAFSGLIGSLMAQGLISLT 1095
S+LHL+ P SSQ I +N G VV + QPG A+SGL SLMAQGLISLT
Sbjct: 755 SALHLRGEALPPLPPGPPPPSSQGILSIRNPGPVVSSNQPGSAYSGLFSSLMAQGLISLT 814
Query: 1094 KQTPVQDSVGLEFNGDLHKMRHESAITILYANLPRQCTTCGQRFKCQEEHSSHMDWHVTK 915
Q+ VQDSVG+EFN DL K+RHES I LY++LPRQCTTCG RFKCQEEHSSHMDWHVTK
Sbjct: 815 NQSTVQDSVGIEFNADLLKVRHESVIKALYSDLPRQCTTCGLRFKCQEEHSSHMDWHVTK 874
Query: 914 NRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAVPGFLPAEPIVEKKDDEEMAVPADEDQ 735
NRMSKNRKQKPSRKWFV+ SMWLSG EALGTDA PGF+PAE IVEKK DEEMAVPADEDQ
Sbjct: 875 NRMSKNRKQKPSRKWFVNTSMWLSGAEALGTDAAPGFMPAETIVEKKSDEEMAVPADEDQ 934
Query: 734 NVCALCGEPFDDFYSDETEEWMYKGAVYMNVPTGSTSGMERSQLGPIVHAKCRSESTVIP 555
N CALCGEPFDDFYSDETEEWMYKGAVY+N P GST GM+RSQLGPIVHAKCRSES+V+
Sbjct: 935 NSCALCGEPFDDFYSDETEEWMYKGAVYLNAPDGSTGGMDRSQLGPIVHAKCRSESSVVS 994
Query: 554 SDDLKRDEGGSSEDGSQRKRLRS 486
S L +DE G E+GSQRKRLRS
Sbjct: 995 SGGLGQDEVGIIEEGSQRKRLRS 1017
>XP_007213705.1 hypothetical protein PRUPE_ppa000684mg [Prunus persica]
Length = 1037
Score = 457 bits (1177), Expect = e-147
Identities = 247/383 (64%), Positives = 273/383 (71%), Gaps = 24/383 (6%)
Frame = -3
Query: 1562 INASGNILNQGPSKSLYNPE-------SKELSLMKPLQLRDQHATP---NQQNQGQA--- 1422
IN S + NQ P SLY PE +K L K QL Q+A P NQ+NQ QA
Sbjct: 655 INYSNTVKNQAPYNSLYVPEQQLDGYENKLLRSTKLTQLTSQNARPMPVNQRNQVQASPL 714
Query: 1421 --QFLS-QEARNYFLPPIAASVPPHLLAPPLNHGYTQQGHNAVMGMVPSNP--------N 1275
QFL QEAR F+ S PP+L P LNH YT QGH + V +NP N
Sbjct: 715 QPQFLPPQEARENFISSAETSGPPYLGLPSLNHRYTLQGHGGAVSTVMANPVPRIPYVPN 774
Query: 1274 SSLHLQRXXXXXXXXXXXPASSQMIPGSQNTGLVVPNQQPGHAFSGLIGSLMAQGLISLT 1095
S+LHL+ P SSQ I +N G VV + QPG A+SGL SLMAQGLISLT
Sbjct: 775 SALHLRGEALPPLPPGPPPPSSQGILSIRNPGPVVSSNQPGSAYSGLFSSLMAQGLISLT 834
Query: 1094 KQTPVQDSVGLEFNGDLHKMRHESAITILYANLPRQCTTCGQRFKCQEEHSSHMDWHVTK 915
Q+ VQDSVG+EFN DL K+RHES I LY++LPRQCTTCG RFKCQEEHSSHMDWHVTK
Sbjct: 835 NQSTVQDSVGIEFNADLLKVRHESVIKALYSDLPRQCTTCGLRFKCQEEHSSHMDWHVTK 894
Query: 914 NRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAVPGFLPAEPIVEKKDDEEMAVPADEDQ 735
NRMSKNRKQKPSRKWFV+ SMWLSG EALGTDA PGF+PAE IVEKK DEEMAVPADEDQ
Sbjct: 895 NRMSKNRKQKPSRKWFVNTSMWLSGAEALGTDAAPGFMPAETIVEKKSDEEMAVPADEDQ 954
Query: 734 NVCALCGEPFDDFYSDETEEWMYKGAVYMNVPTGSTSGMERSQLGPIVHAKCRSESTVIP 555
N CALCGEPFDDFYSDETEEWMYKGAVY+N P GST GM+RSQLGPIVHAKCRSES+V+
Sbjct: 955 NSCALCGEPFDDFYSDETEEWMYKGAVYLNAPDGSTGGMDRSQLGPIVHAKCRSESSVVS 1014
Query: 554 SDDLKRDEGGSSEDGSQRKRLRS 486
S L +DE G E+GSQRKRLRS
Sbjct: 1015 SGGLGQDEVGIIEEGSQRKRLRS 1037
>XP_010655357.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Vitis vinifera]
Length = 1046
Score = 457 bits (1176), Expect = e-147
Identities = 239/378 (63%), Positives = 273/378 (72%), Gaps = 20/378 (5%)
Frame = -3
Query: 1562 INASGNILNQGPSKSLYNPESKELSLMKPLQLRDQHATP-NQQNQGQA-----QFLSQEA 1401
+NA+ ++NQ P+KSL+ PE S + + R + P N +NQ Q QFL QE
Sbjct: 670 MNATTAVVNQDPNKSLFLPELD--SKLPQMANRQAGSIPLNGKNQTQVTRLQPQFLPQET 727
Query: 1400 RNYFLPPIAASVPPHLLAPPLNHGYTQQGHNAVMGMVPSNP--------------NSSLH 1263
F+P A V + +APPLN GYT QGH A + NP NSS+H
Sbjct: 728 HGNFVPSTTAPVSSYSVAPPLNPGYTPQGHAAATSTILLNPVPGVHSSIPIHNISNSSVH 787
Query: 1262 LQRXXXXXXXXXXXPASSQMIPGSQNTGLVVPNQQPGHAFSGLIGSLMAQGLISLTKQTP 1083
Q PA+SQMI QNTG +V NQQPG A SGLI SLMAQGLISL KQ
Sbjct: 788 FQGGALPPLPPGPPPATSQMINIPQNTGPIVSNQQPGSALSGLISSLMAQGLISLAKQPT 847
Query: 1082 VQDSVGLEFNGDLHKMRHESAITILYANLPRQCTTCGQRFKCQEEHSSHMDWHVTKNRMS 903
VQDSVG+EFN DL K+RHESAI+ LY ++ RQCTTCG RFKCQEEHSSHMDWHVTKNR+S
Sbjct: 848 VQDSVGIEFNVDLLKVRHESAISALYGDMSRQCTTCGLRFKCQEEHSSHMDWHVTKNRIS 907
Query: 902 KNRKQKPSRKWFVSASMWLSGTEALGTDAVPGFLPAEPIVEKKDDEEMAVPADEDQNVCA 723
KNRKQKPSRKWFVSASMWLS EALGTDAVPGFLP E I EKKDDEE+AVPADEDQNVCA
Sbjct: 908 KNRKQKPSRKWFVSASMWLSSAEALGTDAVPGFLPTETIAEKKDDEELAVPADEDQNVCA 967
Query: 722 LCGEPFDDFYSDETEEWMYKGAVYMNVPTGSTSGMERSQLGPIVHAKCRSESTVIPSDDL 543
LCGEPFDDFYSDETEEWMYKGAVY+N P GS +GM+RSQLGPIVHAKCRSES V+ +D
Sbjct: 968 LCGEPFDDFYSDETEEWMYKGAVYLNAPEGSAAGMDRSQLGPIVHAKCRSESNVVSPEDF 1027
Query: 542 KRDEGGSSEDGSQRKRLR 489
+DEGG+ E+GS+RKR+R
Sbjct: 1028 GQDEGGNMEEGSKRKRMR 1045
>XP_018849826.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X3 [Juglans regia]
Length = 879
Score = 451 bits (1159), Expect = e-146
Identities = 246/387 (63%), Positives = 278/387 (71%), Gaps = 29/387 (7%)
Frame = -3
Query: 1562 INASGNILNQGPSKSLYNPE-------SKELSLMKPLQLRDQHA-----TPNQQNQG--- 1428
IN S + N P+ SL+ PE ++ELS K QL +QHA T Q QG
Sbjct: 497 INTSNAVNNLRPNGSLHMPELQSDGFRNRELSSAKLPQLPNQHAGLIHVTQRNQVQGTPL 556
Query: 1427 QAQFL-SQEARNYFLPPIAASVPPHLLAPPLNHGYTQQGHNAVMGMVPSNP--------- 1278
+ QFL SQEA P +AA V PHL+APP N GY+ Q H + + V SNP
Sbjct: 557 RPQFLPSQEAH----PSLAAVVQPHLVAPPYNRGYSPQMHGSTVSTVLSNPVTGVQLMLP 612
Query: 1277 ----NSSLHLQRXXXXXXXXXXXPASSQMIPGSQNTGLVVPNQQPGHAFSGLIGSLMAQG 1110
SSLHLQ P SS MIP +QN V NQQ SGLIGSLMAQG
Sbjct: 613 VQNIPSSLHLQGGALPPLPPGAPPTSSHMIPFTQNAVPAVANQQTN--ISGLIGSLMAQG 670
Query: 1109 LISLTKQTPVQDSVGLEFNGDLHKMRHESAITILYANLPRQCTTCGQRFKCQEEHSSHMD 930
ISLTK TP+QDSVG+EFN DL K+RHE+AI+ LYA+LPRQCTTCG RFKCQEEHSSHMD
Sbjct: 671 FISLTKPTPIQDSVGVEFNVDLLKVRHETAISSLYADLPRQCTTCGLRFKCQEEHSSHMD 730
Query: 929 WHVTKNRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAVPGFLPAEPIVEKKDDEEMAVP 750
WHVTKNRMSKNRKQKPSRKWFVS+SMWLSG EALGT+AVPGFLP E IVEKKDDEEMAVP
Sbjct: 731 WHVTKNRMSKNRKQKPSRKWFVSSSMWLSGAEALGTEAVPGFLPTEIIVEKKDDEEMAVP 790
Query: 749 ADEDQNVCALCGEPFDDFYSDETEEWMYKGAVYMNVPTGSTSGMERSQLGPIVHAKCRSE 570
ADEDQN CALCGEPFDDFYSDETEEWMYKGAVY+N P GST+GM+RSQLGPIVHAKCRSE
Sbjct: 791 ADEDQNACALCGEPFDDFYSDETEEWMYKGAVYLNAPCGSTAGMDRSQLGPIVHAKCRSE 850
Query: 569 STVIPSDDLKRDEGGSSEDGSQRKRLR 489
S+ + +D ++DEGG + +GSQ KR+R
Sbjct: 851 SSAVSTDGYRQDEGGITAEGSQSKRMR 877