BLASTX nr result
ID: Phellodendron21_contig00025202
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00025202
(840 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_054422.1 replicase [Humulus japonicus latent virus] AAS86438.... 115 2e-25
NP_620677.1 putative replicase [Spinach latent virus] AAB99733.1... 115 3e-25
YP_001285482.1 putative viral replicase [Citrus variegation viru... 114 9e-25
AAF89826.1 replicase 1a, partial [Hydrangea mosaic virus] 109 4e-24
YP_002455928.1 replicase [Asparagus virus 2] ACJ68508.1 replicas... 109 4e-23
NP_619576.1 replicase [Elm mottle virus] AAB97772.1 replicase [E... 107 1e-22
NP_613282.1 hypothetical protein CiLRVs1gp1 [Citrus leaf rugose ... 105 5e-22
AFR69344.1 replicase protein 1a [Citrus leaf rugose virus] 104 1e-21
AGN29722.1 replicase protein [Strawberry necrotic shock virus] 104 1e-21
AMN16528.1 replicase [Tomato necrotic streak virus] 103 2e-21
NP_620753.1 viral replicase p1 [Tulare apple mosaic virus] AAK01... 103 2e-21
YP_941474.2 replicase [Strawberry necrotic shock virus] ABC47325... 103 2e-21
JAT09021.1 hypothetical protein g.9980, partial [Graphocephala a... 99 3e-21
JAS71630.1 hypothetical protein g.4362, partial [Homalodisca lit... 97 8e-21
ABC61253.1 replicase, partial [Blackberry chlorotic ringspot virus] 96 2e-20
ANS71064.1 ORF 1a, partial [Viola white distortion associated vi... 101 2e-20
YP_002308569.1 replicase [Blackberry chlorotic ringspot virus] A... 100 3e-20
ACU44508.1 p1 protein [Parietaria mottle virus] 100 3e-20
YP_009165996.1 replication-associated polyprotein 1a [Privet rin... 100 5e-20
ALJ96776.1 p1 protein [Parietaria mottle virus] 99 9e-20
>YP_054422.1 replicase [Humulus japonicus latent virus] AAS86438.1 replicase
[Humulus japonicus latent virus]
Length = 1041
Score = 115 bits (289), Expect = 2e-25
Identities = 81/241 (33%), Positives = 126/241 (52%), Gaps = 10/241 (4%)
Frame = +2
Query: 47 YLLVLDALLIYNGEDIIKSLNMALECDHDYEVKLIEGPPGCGKTHAILHEYR----DGDF 214
++LV + +G II +L AL+ D ++VK+++G GCGK++ I + + D
Sbjct: 721 FILVNKDCVFQSGRRIIPALKQALKKDARFKVKILDGVAGCGKSYQIANSVDLSDVNRDL 780
Query: 215 VLCPVRESSDDTRSRLKAMHPDNRRCEDVVRTVDSFLMHGLTGKAKQDRFRRILADECFM 394
VL R +S + R +KA + VRT DS+LM ++ ++ RR+L DECFM
Sbjct: 781 VLTSNRNASIELREVIKASPLMKAK---YVRTCDSYLM-----ASRPEKARRLLFDECFM 832
Query: 395 THAGKWYAAAALLGVSVLQAYGDTKQIPHIPRVQVRKDHVSLKFSSREFNPITRRCPADS 574
HAG YAAA L + AYGDT+QIP I R K +T RCPAD+
Sbjct: 833 RHAGFVYAAATLAECEEVLAYGDTEQIPEISRNPAFKFRCHKLEGEIVQQTVTYRCPADA 892
Query: 575 VAAWSELYDNLVRST-----NPITS-SLFEVNNHRAIQVDKETCLMGMYQADKKEIRKLF 736
V ++ + R+ NP+ S ++ +N+ RA+ VDK + QA+K++++ F
Sbjct: 893 VYVLNKHFYKTKRNIKTKRHNPMRSLNIHAINSVRAVPVDKSALYLTYTQAEKEQLKSAF 952
Query: 737 P 739
P
Sbjct: 953 P 953
>NP_620677.1 putative replicase [Spinach latent virus] AAB99733.1 putative
replicase [Spinach latent virus]
Length = 1056
Score = 115 bits (288), Expect = 3e-25
Identities = 91/271 (33%), Positives = 140/271 (51%), Gaps = 15/271 (5%)
Frame = +2
Query: 5 VETNLIVDDPK-ISGYLLVL-DALLIYN-GEDIIKSLNMALECDHDYEVKLIEGPPGCGK 175
V+ N+ D K +S Y +VL D+ +++ G I+ L AL D ++++ + +G GCGK
Sbjct: 722 VDGNITEDTWKCLSKYAVVLLDSSCVFDAGSRIMPGLKKALVMDANFKIVIEDGVAGCGK 781
Query: 176 THAILHEYR-DGDFVLCPVRESSDDTRSRLKAMHPDNRRCEDVVRTVDSFLMHGLTGKAK 352
T ++L + + D D +L RE+++D KA + E VRTVDS+LM A+
Sbjct: 782 TTSLLKQAKPDSDLLLAANRETANDA----KASGVIPKALEYRVRTVDSYLMLRTWFTAE 837
Query: 353 QDRFRRILADECFMTHAGKWYAAAALLGVSVLQAYGDTKQIPHIPRVQVRKDHVSLKFSS 532
R+L DECF+ HAG YAAA L V + A+GDTKQIP + R+ K + +
Sbjct: 838 -----RLLVDECFLVHAGLVYAAATLARVKEVIAFGDTKQIPFVSRIPTVKLRHASVVGT 892
Query: 533 REFNPITRRCPADSVAAWSE-LYDNLVRSTNPITSS--LFEVNNHRAIQVDKETCLMGMY 703
+ IT RCP D A SE Y V++ N + S L +++ I V+K+T +
Sbjct: 893 LKPRTITYRCPRDVTAVLSEKFYGTKVKTFNLVKQSLELKNIDSSTEIPVEKDTLYIAHT 952
Query: 704 QADKKEIRKL--------FPEHDKSNKSQPH 772
QADK + +L H+ K++ H
Sbjct: 953 QADKHALMRLPGMNGIEVLTTHEAQGKTRDH 983
>YP_001285482.1 putative viral replicase [Citrus variegation virus] ABQ45980.1
putative viral replicase [Citrus variegation virus]
Length = 1076
Score = 114 bits (284), Expect = 9e-25
Identities = 86/239 (35%), Positives = 132/239 (55%), Gaps = 7/239 (2%)
Frame = +2
Query: 38 ISGYLLVL-DALLIYN-GEDIIKSLNMALECDHDYEVKLIEGPPGCGKTHAILHEYR-DG 208
+S Y +VL D +++ G ++ LN AL D +++V + +G GCGKT ++L + + D
Sbjct: 733 LSKYAVVLFDQSCVFDAGSRLLPGLNKALVMDANFKVVIEDGVAGCGKTTSLLKQAKPDS 792
Query: 209 DFVLCPVRESSDDTRSRLKAMHPDNRRCEDVVRTVDSFLMHGLTGKAKQDRFRRILADEC 388
D +L RE++ D ++ + PD VRTVDS+LM A R+L DEC
Sbjct: 793 DLLLAANRETAKDAKN--SGIIPDALLYR--VRTVDSYLMLKNWFTAG-----RLLVDEC 843
Query: 389 FMTHAGKWYAAAALLGVSVLQAYGDTKQIPHIPRV-QVRKDHVSLKFSSREFNPITRRCP 565
F+ HAG YAAAAL V + A+GDTKQIP + R+ V H S+ + + +T RCP
Sbjct: 844 FLVHAGLIYAAAALARVKEVIAFGDTKQIPFVSRIPAVTLRHASV-IGTLKPRTVTYRCP 902
Query: 566 ADSVAAWSE-LYDNLVRSTNPITSS--LFEVNNHRAIQVDKETCLMGMYQADKKEIRKL 733
D A SE Y+ V++ NP+ +S L +N+ I V K+ + +ADK +++L
Sbjct: 903 RDVTAVLSEKFYNTKVKTFNPVKTSLDLISINSGMEIPVVKDALYISHTKADKFALKRL 961
>AAF89826.1 replicase 1a, partial [Hydrangea mosaic virus]
Length = 387
Score = 109 bits (273), Expect = 4e-24
Identities = 89/241 (36%), Positives = 129/241 (53%), Gaps = 9/241 (3%)
Frame = +2
Query: 38 ISGYLLVL-DALLIYN-GEDIIKSLNMALECDHDYEVKLIEGPPGCGKTHAILHEYR-DG 208
+S Y +VL D +++ G +I LN AL D ++ V + +G GCGKT ++L + + D
Sbjct: 65 LSKYNVVLFDQSCVFDAGSRLIPGLNKALVMDANFNVVIEDGVAGCGKTTSLLKQAKPDS 124
Query: 209 DFVLCPVRESSDDTRSRLKAMHPDNRRCEDVVRTVDSFLMHGLTGKAKQDRFRRILADEC 388
D +L RE++ D ++ + P+ VRTVDS+LM L DR +L DEC
Sbjct: 125 DVLLAANRETAKDAKT--SGVIPETLLYR--VRTVDSYLM--LKNWFTADR---LLVDEC 175
Query: 389 FMTHAGKWYAAAALLGVSVLQAYGDTKQIP---HIPRVQVRKDHVSLKFSSREFNPITRR 559
F+ HAG YAAA L V + A+GDTKQIP IP V +R V K R +T R
Sbjct: 176 FLVHAGLIYAAATLARVKEVIAFGDTKQIPFVSRIPTVTLRHASVIGKLKPR---TMTYR 232
Query: 560 CPADSVAAWSE-LYDNLVRSTNPITSS--LFEVNNHRAIQVDKETCLMGMYQADKKEIRK 730
CP D A SE Y+ V + NP+ +S L +N+ I V K+ + +ADK +++
Sbjct: 233 CPRDVTAVLSEKFYNTKVGTFNPVKTSLELININSGVEIPVVKDALYISHTKADKFALKR 292
Query: 731 L 733
L
Sbjct: 293 L 293
>YP_002455928.1 replicase [Asparagus virus 2] ACJ68508.1 replicase [Asparagus virus
2]
Length = 1076
Score = 109 bits (272), Expect = 4e-23
Identities = 82/222 (36%), Positives = 120/222 (54%), Gaps = 5/222 (2%)
Frame = +2
Query: 83 GEDIIKSLNMALECDHDYEVKLIEGPPGCGKTHAILHEYR-DGDFVLCPVRESSDDTRSR 259
G ++ LN AL D ++V + +G GCGKT ++L + + D D +L RE++ D ++
Sbjct: 750 GSRLLPGLNKALVMDASFKVVIEDGVAGCGKTTSLLKQAKPDSDLLLAANRETAKDAKT- 808
Query: 260 LKAMHPDNRRCEDVVRTVDSFLMHGLTGKAKQDRFRRILADECFMTHAGKWYAAAALLGV 439
+ PD VRTVDS+LM L DR +L DECF+ HAG YAAA L V
Sbjct: 809 -SGVVPDALLYR--VRTVDSYLM--LKNWFTADR---LLVDECFLVHAGLIYAAATLARV 860
Query: 440 SVLQAYGDTKQIPHIPRV-QVRKDHVSLKFSSREFNPITRRCPADSVAAWSE-LYDNLVR 613
+ A+GDTKQIP + R+ V H S+ + IT RCP D A SE Y V+
Sbjct: 861 KEVIAFGDTKQIPFVSRIPTVTLRHASV-IGVLKPRTITYRCPRDVTAILSEKFYHTKVK 919
Query: 614 STNPITSSLFEVNNHRAIQVD--KETCLMGMYQADKKEIRKL 733
+ NP+ SL +N + A+++ K+ + +ADK ++KL
Sbjct: 920 TFNPVKISLDLININSAVEIPVVKDALYITHTKADKFALKKL 961
>NP_619576.1 replicase [Elm mottle virus] AAB97772.1 replicase [Elm mottle virus]
Length = 1055
Score = 107 bits (268), Expect = 1e-22
Identities = 88/241 (36%), Positives = 128/241 (53%), Gaps = 9/241 (3%)
Frame = +2
Query: 38 ISGYLLVL-DALLIYN-GEDIIKSLNMALECDHDYEVKLIEGPPGCGKTHAILHEYR-DG 208
+S Y +VL D +++ G +I LN L D ++ V + +G GCGKT ++L + + D
Sbjct: 733 LSKYNVVLFDQSCVFDAGSRLIPGLNKPLVMDPNFNVVIEDGVAGCGKTTSLLKQAKPDS 792
Query: 209 DFVLCPVRESSDDTRSRLKAMHPDNRRCEDVVRTVDSFLMHGLTGKAKQDRFRRILADEC 388
D +L RE++ D ++ + P+ VRTVDS+LM L DR +L DEC
Sbjct: 793 DVLLAANRETAKDAKT--SGVIPETLLYR--VRTVDSYLM--LKNWFTADR---LLVDEC 843
Query: 389 FMTHAGKWYAAAALLGVSVLQAYGDTKQIP---HIPRVQVRKDHVSLKFSSREFNPITRR 559
F+ HAG YAAA L V + A+GDTKQIP IP V +R V K R +T R
Sbjct: 844 FLVHAGLIYAAATLARVKEVIAFGDTKQIPFVSRIPTVTLRHASVIGKLKPR---TMTYR 900
Query: 560 CPADSVAAWSE-LYDNLVRSTNPITSS--LFEVNNHRAIQVDKETCLMGMYQADKKEIRK 730
CP D A SE Y+ V + NP+ +S L +N+ I V K+ + +ADK +++
Sbjct: 901 CPRDVTAVLSEKFYNTKVGTFNPVKTSLELININSGVEIPVVKDALYISHTKADKFALKR 960
Query: 731 L 733
L
Sbjct: 961 L 961
>NP_613282.1 hypothetical protein CiLRVs1gp1 [Citrus leaf rugose virus] AAC49126.1
putative viral replicase [Citrus leaf rugose virus]
prf||2203391A replicase [Citrus leaf rugose virus]
Length = 1051
Score = 105 bits (263), Expect = 5e-22
Identities = 82/233 (35%), Positives = 125/233 (53%), Gaps = 7/233 (3%)
Frame = +2
Query: 38 ISGY-LLVLDALLIYNGED-IIKSLNMALECDHDYEVKLIEGPPGCGKTHAILHEYR-DG 208
IS Y +L+ D+ +++ ++ LN AL D V + +G GCGKT ++L + + +
Sbjct: 724 ISKYNVLLFDSTCVFDARSRLLPGLNKALVMDCKASVIIEDGVAGCGKTTSLLKQAKIES 783
Query: 209 DFVLCPVRESSDDTRSRLKAMHPDNRRCEDVVRTVDSFLMHGLTGKAKQDRFRRILADEC 388
D +L RE++ D R PD + VRT+DS+LM K R+L DEC
Sbjct: 784 DMLLSANRETARDARE--SGAIPDVLKYR--VRTLDSYLM-----LKKWFTADRLLVDEC 834
Query: 389 FMTHAGKWYAAAALLGVSVLQAYGDTKQIPHIPRVQV-RKDHVSLKFSSREFNPITRRCP 565
F+ H+G YAAA L V + A+GDTKQIP + R+ H S++ + IT RCP
Sbjct: 835 FLVHSGIIYAAATLGQVKEIIAFGDTKQIPFVSRIPTFSLKHPSIRGKLKP-KTITYRCP 893
Query: 566 ADSVAAWSE-LYDNLVRSTNPITS--SLFEVNNHRAIQVDKETCLMGMYQADK 715
D+ A SE Y+ V++ NP +S SL ++++ I +K+T + QADK
Sbjct: 894 RDATAVLSEKFYETNVKTFNPTSSSLSLIDISSSMEIPAEKDTLYIMHTQADK 946
>AFR69344.1 replicase protein 1a [Citrus leaf rugose virus]
Length = 1051
Score = 104 bits (260), Expect = 1e-21
Identities = 82/233 (35%), Positives = 124/233 (53%), Gaps = 7/233 (3%)
Frame = +2
Query: 38 ISGY-LLVLDALLIYNGED-IIKSLNMALECDHDYEVKLIEGPPGCGKTHAILHEYR-DG 208
IS Y +L+ D+ +++ ++ LN AL D V + +G GCGKT ++L + + +
Sbjct: 724 ISKYNVLLFDSTCVFDARSRLLPGLNKALVMDCKASVIIEDGVAGCGKTTSLLKQAKIES 783
Query: 209 DFVLCPVRESSDDTRSRLKAMHPDNRRCEDVVRTVDSFLMHGLTGKAKQDRFRRILADEC 388
D +L RE++ D R PD + VRT+DS+LM K R+L DEC
Sbjct: 784 DMLLSANRETARDARE--SGAIPDVLKYR--VRTLDSYLM-----LKKWFTADRLLVDEC 834
Query: 389 FMTHAGKWYAAAALLGVSVLQAYGDTKQIPHIPRVQV-RKDHVSLKFSSREFNPITRRCP 565
F+ H+G YAAA L V + A+GDTKQIP + R+ H S++ + IT RCP
Sbjct: 835 FLVHSGIIYAAATLGQVKEIIAFGDTKQIPFVSRIPTFSLKHPSIRGKLKP-KTITYRCP 893
Query: 566 ADSVAAWSE-LYDNLVRSTNPITS--SLFEVNNHRAIQVDKETCLMGMYQADK 715
D+ A SE Y V++ NP +S SL ++++ I +K+T + QADK
Sbjct: 894 RDATAVLSEKFYKTNVKTFNPTSSSLSLIDISSSMEIPAEKDTLYIMHTQADK 946
>AGN29722.1 replicase protein [Strawberry necrotic shock virus]
Length = 1093
Score = 104 bits (260), Expect = 1e-21
Identities = 86/251 (34%), Positives = 128/251 (50%), Gaps = 9/251 (3%)
Frame = +2
Query: 47 YLLVLDALLIYN-GEDIIKSLNMALECDHDYEVKLIEGPPGCGKTHAILHEYR---DGDF 214
++LV+D ++N G+ +I +L AL+ + +++V +++G GCGKT + R + D
Sbjct: 770 HILVVDDTCVFNSGQRMIPALESALKMNPNFKVTIVDGVAGCGKTTYLKKLARMDANPDI 829
Query: 215 VLCPVRESSDDTRSRLKAMHPDNRRCEDVVRTVDSFLMHGLTGKAKQDRFRRILADECFM 394
+L R SSD+ +S + R +RTVDS+LM L DR +L DECF+
Sbjct: 830 ILTSNRSSSDELKSTINCAEAMKYR----IRTVDSYLM--LKTWFSSDR---LLFDECFL 880
Query: 395 THAGKWYAAAALLGVSVLQAYGDTKQIPHIPRV-QVRKDHVSLKFSSREFNPITRRCPAD 571
THAG YAAA L V + A GDT+Q+P I R+ + R H L S E T RCP D
Sbjct: 881 THAGCIYAAATLAQVKEVIALGDTEQVPFISRLPEFRVQHHKL-CGSVEVQTTTYRCPRD 939
Query: 572 SVAAWSELY--DNLVRSTNPITSSLFEVNNHRAIQVD--KETCLMGMYQADKKEIRKLFP 739
+ A + V+S + I SL + A+Q+ + T M +ADK + K+ P
Sbjct: 940 ATACLKNFFYKRKTVKSASRIERSLELCPINSAVQIPCVENTLYMTHTRADKDALMKI-P 998
Query: 740 EHDKSNKSQPH 772
K N H
Sbjct: 999 GFVKDNIKTTH 1009
>AMN16528.1 replicase [Tomato necrotic streak virus]
Length = 1046
Score = 103 bits (258), Expect = 2e-21
Identities = 82/228 (35%), Positives = 120/228 (52%), Gaps = 6/228 (2%)
Frame = +2
Query: 50 LLVLDALLIYNGED-IIKSLNMALECDHDYEVKLIEGPPGCGKTHAILHEYR-DGDFVLC 223
+L+ D+ I++ +I L AL D V + +G GCGKT ++L + + + D +L
Sbjct: 729 VLLFDSTCIFDARSRLIPGLEKALTMDCKASVVIEDGVAGCGKTTSLLKQTKIETDILLS 788
Query: 224 PVRESSDDTRSRLKAMHPDNRRCEDVVRTVDSFLMHGLTGKAKQDRFRRILADECFMTHA 403
RE++ D R P+ + VRT+DS+LM A+ R+L DECF+ H+
Sbjct: 789 ANRETAKDARE--SGCIPEVMKYR--VRTLDSYLMLKRWFTAE-----RLLVDECFLVHS 839
Query: 404 GKWYAAAALLGVSVLQAYGDTKQIPHIPRVQV-RKDHVSLKFSSREFNPITRRCPADSVA 580
G YAAA L V + A+GDTKQIP + R+ H S+K + IT RCP D+ A
Sbjct: 840 GIIYAAATLGQVKEIIAFGDTKQIPFVSRIPTFGLKHPSIKGVLKP-KLITYRCPRDATA 898
Query: 581 AWSE-LYDNLVRSTNPITS--SLFEVNNHRAIQVDKETCLMGMYQADK 715
SE Y V++ NPI S SL +N+ I +K+T + QADK
Sbjct: 899 ILSEKFYKQKVKTFNPIASSVSLININSGMEIPAEKDTLYIMHTQADK 946
>NP_620753.1 viral replicase p1 [Tulare apple mosaic virus] AAK01481.1 viral
replicase p1 [Tulare apple mosaic virus]
Length = 1060
Score = 103 bits (258), Expect = 2e-21
Identities = 81/233 (34%), Positives = 123/233 (52%), Gaps = 7/233 (3%)
Frame = +2
Query: 38 ISGYLLVL-DALLIYNGED-IIKSLNMALECDHDYEVKLIEGPPGCGKTHAILHEYR-DG 208
+S Y +VL D+ +++ ++ L AL D V + +G GCGKT ++L + + +
Sbjct: 738 LSKYNVVLFDSTCVFDARSRLLPGLEKALTMDCKATVVIEDGVAGCGKTTSLLKQTKIET 797
Query: 209 DFVLCPVRESSDDTRSRLKAMHPDNRRCEDVVRTVDSFLMHGLTGKAKQDRFRRILADEC 388
D +L RE++ D R PD + VRT+DS++M K R+L DEC
Sbjct: 798 DLLLSANRETAKDARE--SGSIPDVMKYR--VRTLDSYIM-----LKKWFTAERMLVDEC 848
Query: 389 FMTHAGKWYAAAALLGVSVLQAYGDTKQIPHIPRVQV-RKDHVSLKFSSREFNPITRRCP 565
F+ H+G YAAA L V + A+GDTKQIP + R+ H S+K + +T RCP
Sbjct: 849 FLVHSGIIYAAATLAQVKEIIAFGDTKQIPFVSRIPTFTLKHPSIKGVLKP-KLVTYRCP 907
Query: 566 ADSVAAWSE-LYDNLVRSTNPITS--SLFEVNNHRAIQVDKETCLMGMYQADK 715
D+ A SE Y V++ NPI+S SL +N+ I +++T + QADK
Sbjct: 908 RDATAVLSEKFYKKKVKTFNPISSSLSLININSGMEIPAERDTLYIMHTQADK 960
>YP_941474.2 replicase [Strawberry necrotic shock virus] ABC47325.3 replicase
[Strawberry necrotic shock virus]
Length = 1090
Score = 103 bits (258), Expect = 2e-21
Identities = 84/251 (33%), Positives = 128/251 (50%), Gaps = 9/251 (3%)
Frame = +2
Query: 47 YLLVLDALLIYN-GEDIIKSLNMALECDHDYEVKLIEGPPGCGKTHAILHEYR---DGDF 214
++LV+D ++N G+ +I +L AL+ + +++V +++G GCGKT + R + D
Sbjct: 767 HILVVDDTCVFNSGQRMIPALEAALKMNPNFKVTIVDGVAGCGKTTHLKKLARMDANPDI 826
Query: 215 VLCPVRESSDDTRSRLKAMHPDNRRCEDVVRTVDSFLMHGLTGKAKQDRFRRILADECFM 394
+L R SSD+ +S + R +RTVDS+LM L DR +L DECF+
Sbjct: 827 ILTSNRSSSDELKSTINCAEAMKYR----IRTVDSYLM--LKTWFSSDR---LLFDECFL 877
Query: 395 THAGKWYAAAALLGVSVLQAYGDTKQIPHIPRV-QVRKDHVSLKFSSREFNPITRRCPAD 571
THAG YAAA L V + A GDT+Q+P I R+ + R H L + E T RCP D
Sbjct: 878 THAGCIYAAATLAQVKEVIALGDTEQVPFISRLPEFRVQHHKL-CGNIEVQTTTYRCPRD 936
Query: 572 SVAAWSELY--DNLVRSTNPITSSLFEVNNHRAIQVDK--ETCLMGMYQADKKEIRKLFP 739
+ A + V+S + + SL + A+Q+ + T M +ADK + K+ P
Sbjct: 937 ATACLKNFFYKKKTVKSASRVERSLELCPINSAVQIPRVENTLYMTHTRADKDALMKI-P 995
Query: 740 EHDKSNKSQPH 772
K N H
Sbjct: 996 GFVKDNIKTTH 1006
>JAT09021.1 hypothetical protein g.9980, partial [Graphocephala atropunctata]
Length = 238
Score = 99.4 bits (246), Expect = 3e-21
Identities = 68/236 (28%), Positives = 114/236 (48%), Gaps = 11/236 (4%)
Frame = +2
Query: 59 LDALLIYNGEDIIKSLNMALECDHDYEVKLIEGPPGCGKTHAILHEYRDGDFVLCPVRES 238
L+ L YN I N H ++ L++G PGCGKT +L+ Y + D +L P R++
Sbjct: 1 LNELRFYNSTKHIDIQNT-----HHVKLNLVQGVPGCGKTTFLLNNYEENDLILFPTRDA 55
Query: 239 SDDTRSRLKAMHP--DNRRCEDVVRTVDSFLMHGLTGKAKQDRFRRILADECFMTHAGKW 412
+ D R R K H +C D RTV SFL++ + + ++R+ DE M HAG+
Sbjct: 56 AVDFRRRFKDKHSHYSQAKCNDTFRTVHSFLINSTQHLKRGNTYKRLFIDEALMLHAGEV 115
Query: 413 YAAAALLGVSVLQAYGDTKQIPHIPR---VQVRKDHVSLKFSSREFNPITRRCPADSVAA 583
AA G + + GD QIP I R ++ + +++ + + T RC + A
Sbjct: 116 LFAATQSGANEVILIGDINQIPFINRTMNIETKYHNITEIATIEKTLNTTYRCTKSTTAI 175
Query: 584 WSELYDNLVRSTNPITSSLFEVNNHRAIQVDKETCLMGMY------QADKKEIRKL 733
S+ Y +++TN + + L E+ + ++ K Y Q++K+E+ KL
Sbjct: 176 LSKHYKQGMKTTNNVENEL-EIQHFSDLESLKLNPGQNKYKFLVFKQSEKRELNKL 230
>JAS71630.1 hypothetical protein g.4362, partial [Homalodisca liturata]
Length = 183
Score = 96.7 bits (239), Expect = 8e-21
Identities = 56/157 (35%), Positives = 88/157 (56%), Gaps = 4/157 (2%)
Frame = +2
Query: 38 ISGYLLVLDALLIYNGEDIIKSL-NMALECDHDYEVKLIEGPPGCGKTHAILHEYRDGDF 214
I+ +LV D + N ++ S+ N+ ++ + L++G PGCGKT IL+ Y+ GD
Sbjct: 15 INSNILVSDDTQLLNDLRLLNSVKNIKIDSVGKINLNLVQGVPGCGKTTYILNNYKQGDL 74
Query: 215 VLCPVRESSDDTRSRLKAMHP--DNRRCEDVVRTVDSFLMHGLTGKAKQ-DRFRRILADE 385
+L P R+S+ D R R + +P +N + + RTV SF+++ LT KQ ++ R++ DE
Sbjct: 75 ILFPTRDSAQDFRRRFRNTYPNINNTKINNTFRTVHSFIIN-LTQHLKQGQKYERLIVDE 133
Query: 386 CFMTHAGKWYAAAALLGVSVLQAYGDTKQIPHIPRVQ 496
M HAG+ AA L G GD QIP+I R +
Sbjct: 134 ALMLHAGEIIYAAVLAGAKETMLVGDLNQIPYINRTE 170
>ABC61253.1 replicase, partial [Blackberry chlorotic ringspot virus]
Length = 197
Score = 95.9 bits (237), Expect = 2e-20
Identities = 69/187 (36%), Positives = 101/187 (54%), Gaps = 9/187 (4%)
Frame = +2
Query: 47 YLLVLDALLIYN-GEDIIKSLNMALECDHDYEVKLIEGPPGCGKTHAILHEYR---DGDF 214
++L++D ++N G+ +I +L AL+ + ++V +++G GCGKT + R + D
Sbjct: 25 HVLIVDDTCVFNSGQRMIPALEAALKMNPTFKVTIVDGVAGCGKTTYLKKLARMEANPDL 84
Query: 215 VLCPVRESSDDTRSRLKAMHPDNRRCEDV----VRTVDSFLMHGLTGKAKQDRFRRILAD 382
+L R SSD+ + +K C DV +RTVDS+LM L DR +L D
Sbjct: 85 ILTSNRSSSDELKETIK--------CADVMKYRIRTVDSYLM--LKSWFSSDR---LLFD 131
Query: 383 ECFMTHAGKWYAAAALLGVSVLQAYGDTKQIPHIPRV-QVRKDHVSLKFSSREFNPITRR 559
ECF+THAG YAAA L V + A GDT+Q+P I R+ + R H L E T R
Sbjct: 132 ECFLTHAGCIYAAATLAQVKEVIALGDTEQVPFISRLPEFRVQHHKLS-GKIEVQTTTYR 190
Query: 560 CPADSVA 580
CP D+ A
Sbjct: 191 CPRDATA 197
>ANS71064.1 ORF 1a, partial [Viola white distortion associated virus]
Length = 1071
Score = 101 bits (251), Expect = 2e-20
Identities = 87/236 (36%), Positives = 121/236 (51%), Gaps = 11/236 (4%)
Frame = +2
Query: 50 LLVLDALLIYNGEDIIKSLNMALECDHDYEVKLIEGPPGCGKTHAILHEYR----DGDFV 217
++V D+ + E II SL AL+ + D+ V +++G GCGKT I D D +
Sbjct: 751 VIVDDSCFFSSVEKIIPSLEKALKMNCDFSVTIMDGVAGCGKTTKIKSIASLIGDDVDLI 810
Query: 218 LCPVRESSDDTRSRLKAMHPDNRRCEDVVRTVDSFLMHGLTGKAKQDRFRRILADECFMT 397
L R SS + R L+ R VRT DS+LM T A Q +R+L DECFM
Sbjct: 811 LTSNRSSSVELRESLEGSQLVKSR---YVRTCDSYLM---TNNAPQ--CKRMLFDECFMQ 862
Query: 398 HAGKWYAAAALLGVSVLQAYGDTKQIPHIPR--VQVRKDHVSLKFSSREFNPITRRCPAD 571
HAG YAAA L GVS + A+GDT+QIP I R + V K HV LK + +T R PAD
Sbjct: 863 HAGCIYAAATLAGVSEIIAFGDTEQIPFISRNDMFVLKHHV-LK-GDHKVQDVTYRNPAD 920
Query: 572 SVAAWSELY---DNLVRSTNPITSSL--FEVNNHRAIQVDKETCLMGMYQADKKEI 724
+V A S+ + V++ I S+ +N ++VD + QA+K +
Sbjct: 921 AVYALSKFFYKKKTPVKTKRHILRSIKVKPINALSQVEVDSSAVYITHTQAEKASL 976
>YP_002308569.1 replicase [Blackberry chlorotic ringspot virus] AAZ42391.1 replicase
[Blackberry chlorotic ringspot virus]
Length = 1093
Score = 100 bits (250), Expect = 3e-20
Identities = 78/250 (31%), Positives = 124/250 (49%), Gaps = 8/250 (3%)
Frame = +2
Query: 47 YLLVLDALLIYN-GEDIIKSLNMALECDHDYEVKLIEGPPGCGKTHAILHEYR---DGDF 214
++L++D ++N G+ ++ ++ AL+ + ++V +++G GCGKT + R + D
Sbjct: 770 HVLIVDDTCVFNSGQRMVPAMEAALKMNPTFKVTIVDGVAGCGKTTYLKKLARMEANPDL 829
Query: 215 VLCPVRESSDDTRSRLKAMHPDNRRCEDVVRTVDSFLMHGLTGKAKQDRFRRILADECFM 394
+L R SSD+ + + R +RTVDS+LM L DR +L DECF+
Sbjct: 830 ILTSNRSSSDELKDTIDCAEAMKYR----IRTVDSYLM--LKSWFSSDR---LLFDECFL 880
Query: 395 THAGKWYAAAALLGVSVLQAYGDTKQIPHIPRVQVRKDHVSLKFSSREFNPITRRCPADS 574
THAG YAAA L V + A GDT+Q+P I R+ K E T RCP D+
Sbjct: 881 THAGCVYAAATLAQVKEVIALGDTEQVPFISRLPEFKVQYHKLCGKIEVQTTTYRCPRDA 940
Query: 575 VAAWSELY--DNLVRSTNPITSSLFEVNNHRAIQVD--KETCLMGMYQADKKEIRKLFPE 742
A + V+S + + SL + A+Q+ + T M +ADK + K+ P
Sbjct: 941 TACLKTFFYKRKTVKSASRVDRSLELCPINSAVQIPCVENTLYMTHTRADKDALMKI-PG 999
Query: 743 HDKSNKSQPH 772
+K+N H
Sbjct: 1000 FNKNNIKTTH 1009
>ACU44508.1 p1 protein [Parietaria mottle virus]
Length = 1097
Score = 100 bits (250), Expect = 3e-20
Identities = 83/251 (33%), Positives = 125/251 (49%), Gaps = 8/251 (3%)
Frame = +2
Query: 44 GYLLVLDALLIYNGEDIIKSLNMALECDHDYEVKLIEGPPGCGKTHAILHEYR---DGDF 214
G ++V D+ + +G+ +I +L AL+ + VK+++G GCGKT + R + D
Sbjct: 775 GAIVVDDSCVFNSGQRLIPALESALKIKPRFSVKIVDGVAGCGKTTHLKKISRLDANPDI 834
Query: 215 VLCPVRESSDDTRSRLKAMHPDNRRCEDVVRTVDSFLMHGLTGKAKQDRFRRILADECFM 394
VL R SSD+ + L PD + +RTVDS+LM A R+L DECF+
Sbjct: 835 VLTSNRSSSDELKEALTC--PDAMKYR--IRTVDSYLMLKSWFSAS-----RMLFDECFL 885
Query: 395 THAGKWYAAAALLGVSVLQAYGDTKQIPHIPRV-QVRKDHVSLKFSSREFNPITRRCPAD 571
THAG YAAA L VS + A GDT+Q+P I R+ + R H L E T RCP D
Sbjct: 886 THAGCVYAAATLAQVSEVIALGDTEQVPFISRLPEFRMQHHKLS-GEIETQTTTYRCPRD 944
Query: 572 SVAAWSELY--DNLVRSTNPITSSLFEVNNHRAIQV--DKETCLMGMYQADKKEIRKLFP 739
+ ++ + V+S + + S+ V IQ+ + + + +ADK + K+ P
Sbjct: 945 ATYCLKSMFYKNKSVKSASVVERSIELVPISSPIQIPCENDVLYITHTRADKDALLKI-P 1003
Query: 740 EHDKSNKSQPH 772
K N H
Sbjct: 1004 GFKKENIKTTH 1014
>YP_009165996.1 replication-associated polyprotein 1a [Privet ringsport virus]
ALF95057.1 replication-associated polyprotein 1a [Privet
ringsport virus]
Length = 1095
Score = 100 bits (248), Expect = 5e-20
Identities = 80/251 (31%), Positives = 129/251 (51%), Gaps = 9/251 (3%)
Frame = +2
Query: 47 YLLVLDALLIYN-GEDIIKSLNMALECDHDYEVKLIEGPPGCGKT---HAILHEYRDGDF 214
++LV+D ++N G+ +I +L AL+ +++V +I+G GCGKT +++ + D
Sbjct: 772 HVLVVDESCVFNSGQRMIPALESALKLKPNFKVTIIDGVAGCGKTTHLKKLVNMSGNPDI 831
Query: 215 VLCPVRESSDDTRSRLKAMHPDNRRCEDVVRTVDSFLMHGLTGKAKQDRFRRILADECFM 394
VL R SSD+ + ++ R +RTVDS+LM +K R+L DECF+
Sbjct: 832 VLTSNRSSSDELKESIQCDESMKYR----IRTVDSYLMMKNWFSSK-----RLLFDECFL 882
Query: 395 THAGKWYAAAALLGVSVLQAYGDTKQIPHIPRV-QVRKDHVSLKFSSREFNPITRRCPAD 571
THAG YAAA L V + A GDT+Q+P I R+ + R H + E T RCP D
Sbjct: 883 THAGCVYAAATLAQVEDVVALGDTEQVPFISRLPEFRMQHQRIS-GKIEVQTTTYRCPRD 941
Query: 572 SVAAWSELY--DNLVRSTNPITSSLFEVNNHRAIQVDKETCLMGM--YQADKKEIRKLFP 739
+ A + + + V++ + + +SL +Q+ E ++ M +ADK + K+ P
Sbjct: 942 ATACLKKFFYKEKTVKTASVVETSLDLNPIASVVQIPCEDNVLYMTHMRADKDALMKI-P 1000
Query: 740 EHDKSNKSQPH 772
K N H
Sbjct: 1001 GIRKQNVKTTH 1011
>ALJ96776.1 p1 protein [Parietaria mottle virus]
Length = 1097
Score = 99.4 bits (246), Expect = 9e-20
Identities = 82/251 (32%), Positives = 123/251 (49%), Gaps = 8/251 (3%)
Frame = +2
Query: 44 GYLLVLDALLIYNGEDIIKSLNMALECDHDYEVKLIEGPPGCGKTHAILHEYR---DGDF 214
G ++V D+ + +G+ +I +L AL+ + VK+++G GCGKT + R + D
Sbjct: 775 GAIVVDDSCVFNSGQRLIPALESALKIKPRFSVKIVDGVAGCGKTTHLKKISRLDANPDI 834
Query: 215 VLCPVRESSDDTRSRLKAMHPDNRRCEDVVRTVDSFLMHGLTGKAKQDRFRRILADECFM 394
VL R SSD+ + L R +RTVDS+LM A R+L DECF+
Sbjct: 835 VLTSNRSSSDELKEALTCPEAMKYR----IRTVDSYLMLKSWFSAS-----RMLFDECFL 885
Query: 395 THAGKWYAAAALLGVSVLQAYGDTKQIPHIPRV-QVRKDHVSLKFSSREFNPITRRCPAD 571
THAG YAAA L VS + A GDT+Q+P I R+ + R H L E T RCP D
Sbjct: 886 THAGCVYAAATLAQVSEVIALGDTEQVPFISRLPEFRMQHHKL-LGEIETQTTTYRCPRD 944
Query: 572 SVAAWSELY--DNLVRSTNPITSSLFEVNNHRAIQV--DKETCLMGMYQADKKEIRKLFP 739
+ ++ + V++ + I S+ V IQ+ + + + +ADK + K+ P
Sbjct: 945 ATYCLKSMFYKNKSVKTASVIERSIDLVPISSPIQIPCENDVLYITHTRADKDALLKI-P 1003
Query: 740 EHDKSNKSQPH 772
K N H
Sbjct: 1004 GFKKENIKTTH 1014