BLASTX nr result

ID: Phellodendron21_contig00023921 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00023921
         (1233 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YP_009318202.1 ribosomal protein L32 (chloroplast) [Corylus avel...    69   1e-11
YP_009166173.1 ribosomal protein L32 (chloroplast) [Zanthoxylum ...    54   5e-06

>YP_009318202.1 ribosomal protein L32 (chloroplast) [Corylus avellana]
           YP_009318282.1 ribosomal protein L32 (chloroplast)
           [Corylus heterophylla] YP_009318125.1 ribosomal protein
           L32 (chloroplast) [Corylus fargesii] YP_009331522.1
           ribosomal protein L32 (chloroplast) [Corylus chinensis]
           AOZ20326.1 ribosomal protein L32 (chloroplast) [Corylus
           fargesii] AOZ20404.1 ribosomal protein L32 (chloroplast)
           [Corylus avellana] AOZ20484.1 ribosomal protein L32
           (chloroplast) [Corylus heterophylla] APF31771.1
           ribosomal protein L32 (chloroplast) [Corylus chinensis]
          Length = 56

 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 35/55 (63%), Positives = 39/55 (70%)
 Frame = -2

Query: 944 LFICCTKKLFEFPVERDFANEKAFNAAQYPXXXXXXXXXXXFNIEVRFFGTAIQK 780
           ++    KKLFEFPVERDFANEKAFNA QYP           F+IEVRFFGTAI+K
Sbjct: 1   MYFLLYKKLFEFPVERDFANEKAFNATQYPSIFQIFLRIRFFDIEVRFFGTAIKK 55


>YP_009166173.1 ribosomal protein L32 (chloroplast) [Zanthoxylum piperitum]
           YP_009307174.1 ribosomal protein L32 (chloroplast)
           [Zanthoxylum bungeanum] AKZ89370.1 ribosomal protein L32
           (chloroplast) [Zanthoxylum piperitum] AOR53619.1
           ribosomal protein L32 (chloroplast) [Zanthoxylum
           bungeanum]
          Length = 57

 Score = 53.5 bits (127), Expect = 5e-06
 Identities = 29/57 (50%), Positives = 30/57 (52%)
 Frame = +1

Query: 787 MAVPKKRTSXXXXXXXXXXXXXXGYWXXXXXXXXXXXXXTGNSKSFFVQQINKKTLE 957
           MAVPKKRTS              GYW             TGNSKSFFVQQINKKTL+
Sbjct: 1   MAVPKKRTSILKKRIRKNIWKKGGYWAALKAFSLAKSLSTGNSKSFFVQQINKKTLK 57


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