BLASTX nr result
ID: Phellodendron21_contig00023801
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00023801
(3064 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006493898.1 PREDICTED: DNA-directed RNA polymerase I subunit ... 1749 0.0
XP_006421454.1 hypothetical protein CICLE_v10004132mg [Citrus cl... 1747 0.0
XP_017622035.1 PREDICTED: DNA-directed RNA polymerase I subunit ... 1310 0.0
XP_012470632.1 PREDICTED: DNA-directed RNA polymerase I subunit ... 1309 0.0
XP_016741115.1 PREDICTED: DNA-directed RNA polymerase I subunit ... 1306 0.0
XP_016742446.1 PREDICTED: DNA-directed RNA polymerase I subunit ... 1304 0.0
XP_017977139.1 PREDICTED: DNA-directed RNA polymerase I subunit ... 1297 0.0
EOY09355.1 Nuclear RNA polymerase A1, putative isoform 1 [Theobr... 1297 0.0
XP_012073009.1 PREDICTED: DNA-directed RNA polymerase I subunit ... 1295 0.0
XP_018842360.1 PREDICTED: DNA-directed RNA polymerase I subunit ... 1293 0.0
XP_007028854.2 PREDICTED: DNA-directed RNA polymerase I subunit ... 1291 0.0
EOY09356.1 Nuclear RNA polymerase A1, putative isoform 2 [Theobr... 1291 0.0
GAV72253.1 RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1... 1275 0.0
OAY40529.1 hypothetical protein MANES_09G029200 [Manihot esculenta] 1274 0.0
OMO63119.1 RNA polymerase, alpha subunit [Corchorus capsularis] 1261 0.0
CBI29879.3 unnamed protein product, partial [Vitis vinifera] 1257 0.0
XP_010653802.1 PREDICTED: DNA-directed RNA polymerase I subunit ... 1256 0.0
XP_015579396.1 PREDICTED: DNA-directed RNA polymerase I subunit ... 1252 0.0
EEF35648.1 DNA-directed RNA polymerase I largest subunit, putati... 1247 0.0
XP_011020318.1 PREDICTED: DNA-directed RNA polymerase I subunit ... 1236 0.0
>XP_006493898.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 [Citrus sinensis]
Length = 1715
Score = 1749 bits (4531), Expect = 0.0
Identities = 879/1024 (85%), Positives = 921/1024 (89%), Gaps = 4/1024 (0%)
Frame = -1
Query: 3064 VVPVYNPLLFNLLYVILKRTCFFCHHFRASRSEVEKCVRKLELIIKGDIVAAKSLDSELP 2885
VVPVYNPLLFNLLY +LKR CFFCHHF+ASR EVEKCVRKLELIIKGDI+AAKSLD +LP
Sbjct: 84 VVPVYNPLLFNLLYTLLKRICFFCHHFKASRREVEKCVRKLELIIKGDIIAAKSLDLDLP 143
Query: 2884 SESSNPEDSDVSNKSSCSMINPRGKYYNVKNLKPQEWTSXXXXXXXXXXXXXXKIETSKC 2705
SESSNPEDSDVSNKSSCSM+ PRG Y NV+NLKPQEWTS KIET+KC
Sbjct: 144 SESSNPEDSDVSNKSSCSMVTPRGNYDNVRNLKPQEWTSLQFAEAKLALLQFLKIETTKC 203
Query: 2704 GNCKAKNPSISKPTFGWIHMSGMPHADIRANLIRGCNLGESFSGGAAATDLGDASDVDTP 2525
GNCKAKNP ISKPTFGWIHM+GMPHADIRANLIRGCNLGE+FSGG DLG +SDVD P
Sbjct: 204 GNCKAKNPRISKPTFGWIHMNGMPHADIRANLIRGCNLGETFSGGEEEKDLGASSDVDAP 263
Query: 2524 ETYALNGASLGTRDTTTRS-QKGSGGVRSNFKKQKDLFSGPLLPSDVKDIIEKLWENEFE 2348
ET++ NG GT+DT R QKGSG V S FKKQKDLFSGPLLPSDVKDIIEKLWENEFE
Sbjct: 264 ETHSFNGTFPGTQDTAARRHQKGSGAVPSGFKKQKDLFSGPLLPSDVKDIIEKLWENEFE 323
Query: 2347 LCSFISDIQQQGFGRKPGDSIFFLGAIVVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQCN 2168
LCSFISD+QQQGFG+K G SIFFLGA++VPPIKFRLPSKGGDSVMEHPQTVLLSKVLQ N
Sbjct: 324 LCSFISDMQQQGFGKKAGHSIFFLGAVLVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQAN 383
Query: 2167 IYLANAYVNQSE--KITVARWMDLQQSVNVFFDSKNAAGQKDMASGICQLLEKKEGLFRQ 1994
IYLANAYVNQ + KI V RWM+LQQSVNV FD KNAAGQ+DMASGICQLLEKKEGLFRQ
Sbjct: 384 IYLANAYVNQPDNAKIIVTRWMNLQQSVNVLFDGKNAAGQRDMASGICQLLEKKEGLFRQ 443
Query: 1993 KLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVMKLRDSIINGPEI 1814
KLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNV+KLRDSIING EI
Sbjct: 444 KLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVKLRDSIINGAEI 503
Query: 1813 HPGATNYLDKLSTMRLPLNKKMRISISRKLPSSRGAIMQPGKDSDYEFEGKTVYRHLQDG 1634
HPGAT+YLDKLSTMRLP NKKMRISI+RKL +SRGAI+QPGKDSD EFEGK VYRHLQDG
Sbjct: 504 HPGATHYLDKLSTMRLPPNKKMRISIARKLDTSRGAIVQPGKDSDNEFEGKIVYRHLQDG 563
Query: 1633 DVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISR 1454
DVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDE+SR
Sbjct: 564 DVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSR 623
Query: 1453 AEAYNIVNANDQYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFYQXXXXXXXXXX 1274
AEAYNIVNAN+QYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEF Q
Sbjct: 624 AEAYNIVNANNQYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFCQLLYSSGVSSS 683
Query: 1273 XXXSFTGKPGQRVLISSSEQEVLPLLPTIWKPEPLWTGKQVITAVLNHITRGRLPFTVER 1094
SFTGKPGQRVLIS SEQEVLPLLP IWKPEPLWTGKQVITAVLNHITRGR PF VER
Sbjct: 684 GLGSFTGKPGQRVLISRSEQEVLPLLPAIWKPEPLWTGKQVITAVLNHITRGRPPFVVER 743
Query: 1093 AGKLPQDFFKTRFNAD-XXXXXXXXXXKLSKTNKMHKDKPGKEKEDVDGKPSGGKEDDKN 917
GKLPQDFFKTRFNAD KLSKTNKMHKDK GK+KE V+GKP KE +KN
Sbjct: 744 GGKLPQDFFKTRFNADKQSDRKKNDKGKLSKTNKMHKDKSGKKKEVVEGKPGEEKEAEKN 803
Query: 916 KSKQKELNEEKLLIYKNDLVQGVIDKAQFADYGLVHTVQEIYGSNTAGTLLSALSRLFTV 737
KSK+KEL+EEKLLIYKNDLV+GVIDKAQFADYGLVHTVQE+YGSNTAGTLLSALSRLFTV
Sbjct: 804 KSKEKELSEEKLLIYKNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGTLLSALSRLFTV 863
Query: 736 FLQMHGFTCGVXXXXXXXXXXKERKNHLEGSEEIGKKVHLDALELEDGAEMDPIKLKSEI 557
FLQMHGFTCGV +ERKNHL GSEEIGK+VHL+ALELEDGAE+DPIKLKSEI
Sbjct: 864 FLQMHGFTCGVDDLLILKDKERERKNHLHGSEEIGKRVHLEALELEDGAEIDPIKLKSEI 923
Query: 556 EKAIRGGGDAAVAYFDMKMTSELNKHTSSSVINDLLSEGLLKPTGKNWISLMTTSGAKGS 377
EKA+RGGGDAAVAYFDMKMTS+LNKHTSSSVIN+LLSEGLLKPTGKNWISLMTTSGAKGS
Sbjct: 924 EKAMRGGGDAAVAYFDMKMTSQLNKHTSSSVINELLSEGLLKPTGKNWISLMTTSGAKGS 983
Query: 376 KVNFQQISAHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQEYY 197
KVNFQQIS+HLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQEYY
Sbjct: 984 KVNFQQISSHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQEYY 1043
Query: 196 FHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKISYDYSVRDADGSIVQFRYGEDGVD 17
FHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKISYDYSVRDADGSIVQF YGEDGVD
Sbjct: 1044 FHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDYSVRDADGSIVQFCYGEDGVD 1103
Query: 16 VHQT 5
VHQT
Sbjct: 1104 VHQT 1107
>XP_006421454.1 hypothetical protein CICLE_v10004132mg [Citrus clementina] ESR34694.1
hypothetical protein CICLE_v10004132mg [Citrus
clementina]
Length = 1715
Score = 1747 bits (4525), Expect = 0.0
Identities = 878/1024 (85%), Positives = 920/1024 (89%), Gaps = 4/1024 (0%)
Frame = -1
Query: 3064 VVPVYNPLLFNLLYVILKRTCFFCHHFRASRSEVEKCVRKLELIIKGDIVAAKSLDSELP 2885
VV VYNPLLFNLLY +LKR CFFCHHF+ASR EVEKCVRKLELIIKGDI+AAKSLD +LP
Sbjct: 84 VVSVYNPLLFNLLYTLLKRICFFCHHFKASRREVEKCVRKLELIIKGDIIAAKSLDLDLP 143
Query: 2884 SESSNPEDSDVSNKSSCSMINPRGKYYNVKNLKPQEWTSXXXXXXXXXXXXXXKIETSKC 2705
SESSNPEDSDVSNKSSCSM+ PRG Y NV+NLKPQEWTS KIET+KC
Sbjct: 144 SESSNPEDSDVSNKSSCSMVTPRGNYDNVRNLKPQEWTSLQFAEAKLALLQFLKIETTKC 203
Query: 2704 GNCKAKNPSISKPTFGWIHMSGMPHADIRANLIRGCNLGESFSGGAAATDLGDASDVDTP 2525
GNCKAKNP ISKPTFGWIHM+GMPHADIRANLIRGCNLGE+FSGG DLG +SDVD P
Sbjct: 204 GNCKAKNPRISKPTFGWIHMNGMPHADIRANLIRGCNLGETFSGGEEEKDLGTSSDVDAP 263
Query: 2524 ETYALNGASLGTRDTTTRS-QKGSGGVRSNFKKQKDLFSGPLLPSDVKDIIEKLWENEFE 2348
ET++ NGA GT+DT R QKGSG V S FKKQKDLFSGPLLPSDVKDIIEKLWENEFE
Sbjct: 264 ETHSFNGAFPGTQDTAARRHQKGSGAVPSGFKKQKDLFSGPLLPSDVKDIIEKLWENEFE 323
Query: 2347 LCSFISDIQQQGFGRKPGDSIFFLGAIVVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQCN 2168
LCSFISD+QQQGFG+K G SIFFLG ++VPPIKFRLPSKGGDSVMEHPQTVLLSKVLQ N
Sbjct: 324 LCSFISDMQQQGFGKKAGHSIFFLGVVLVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQAN 383
Query: 2167 IYLANAYVNQSE--KITVARWMDLQQSVNVFFDSKNAAGQKDMASGICQLLEKKEGLFRQ 1994
IYLANAYVNQ + K+ VARWM+LQQSVNV FD KNAAGQ+D+ASGICQLLEKKEGLFRQ
Sbjct: 384 IYLANAYVNQPDNAKVIVARWMNLQQSVNVLFDGKNAAGQRDVASGICQLLEKKEGLFRQ 443
Query: 1993 KLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVMKLRDSIINGPEI 1814
KLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNV+KLRDSIING EI
Sbjct: 444 KLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVKLRDSIINGAEI 503
Query: 1813 HPGATNYLDKLSTMRLPLNKKMRISISRKLPSSRGAIMQPGKDSDYEFEGKTVYRHLQDG 1634
HPGAT+YLDKLSTMRLP NKKMRISI RKL +SRGAI+QPGKDSD EFEGK VYRHLQDG
Sbjct: 504 HPGATHYLDKLSTMRLPPNKKMRISIGRKLDTSRGAIVQPGKDSDNEFEGKMVYRHLQDG 563
Query: 1633 DVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISR 1454
DVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDE+SR
Sbjct: 564 DVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSR 623
Query: 1453 AEAYNIVNANDQYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFYQXXXXXXXXXX 1274
AEAYNIVNAN+QYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEF Q
Sbjct: 624 AEAYNIVNANNQYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFCQLLYSSGVSSS 683
Query: 1273 XXXSFTGKPGQRVLISSSEQEVLPLLPTIWKPEPLWTGKQVITAVLNHITRGRLPFTVER 1094
SFTGKPGQRVLIS SEQEVLPLLP IWKPEPLWTGKQVITAVLNHITRGR PF VER
Sbjct: 684 GLGSFTGKPGQRVLISRSEQEVLPLLPAIWKPEPLWTGKQVITAVLNHITRGRPPFIVER 743
Query: 1093 AGKLPQDFFKTRFNAD-XXXXXXXXXXKLSKTNKMHKDKPGKEKEDVDGKPSGGKEDDKN 917
GKLPQDFFKTRFNAD KLSKTNKMHKDK GK+KE V+GKP KE +KN
Sbjct: 744 GGKLPQDFFKTRFNADKQSGRKKNDKGKLSKTNKMHKDKSGKKKEVVEGKPGEEKEAEKN 803
Query: 916 KSKQKELNEEKLLIYKNDLVQGVIDKAQFADYGLVHTVQEIYGSNTAGTLLSALSRLFTV 737
KSK+KEL+EEKLLIYKNDLV+GVIDKAQFADYGLVHTVQE+YGSNTAGTLLSALSRLFTV
Sbjct: 804 KSKEKELSEEKLLIYKNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGTLLSALSRLFTV 863
Query: 736 FLQMHGFTCGVXXXXXXXXXXKERKNHLEGSEEIGKKVHLDALELEDGAEMDPIKLKSEI 557
FLQMHGFTCGV +ERKNHL GSEEIGK+VHL+ALELEDGAE+DPIKLKSEI
Sbjct: 864 FLQMHGFTCGVDDLLILKDKERERKNHLHGSEEIGKRVHLEALELEDGAEIDPIKLKSEI 923
Query: 556 EKAIRGGGDAAVAYFDMKMTSELNKHTSSSVINDLLSEGLLKPTGKNWISLMTTSGAKGS 377
EKA+RGGGDAAVAYFDMKMTS+LNKHTSSSVINDLLSEGLLKPTGKNWISLMTTSGAKGS
Sbjct: 924 EKAMRGGGDAAVAYFDMKMTSQLNKHTSSSVINDLLSEGLLKPTGKNWISLMTTSGAKGS 983
Query: 376 KVNFQQISAHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQEYY 197
KVNFQQIS+HLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQEYY
Sbjct: 984 KVNFQQISSHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQEYY 1043
Query: 196 FHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKISYDYSVRDADGSIVQFRYGEDGVD 17
FHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKISYDYSVRDADGSIVQF YGEDGVD
Sbjct: 1044 FHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDYSVRDADGSIVQFCYGEDGVD 1103
Query: 16 VHQT 5
VHQT
Sbjct: 1104 VHQT 1107
>XP_017622035.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 [Gossypium
arboreum]
Length = 1450
Score = 1310 bits (3390), Expect = 0.0
Identities = 678/1030 (65%), Positives = 789/1030 (76%), Gaps = 10/1030 (0%)
Frame = -1
Query: 3064 VVPVYNPLLFNLLYVILKRTCFFCHHFRASRSEVEKCVRKLELIIKGDIVAAKSLDSELP 2885
V P+YNPLLFN L+ +++RTCFFC+HFRA R+EVE+C+ +L+LI KGDIV AK LD++
Sbjct: 84 VSPIYNPLLFNFLHTLVQRTCFFCYHFRAERTEVERCISQLKLIGKGDIVGAKRLDTDSK 143
Query: 2884 SESSNPEDSDVSNKSSCSMINPRGKYYNVKNLKPQEWTSXXXXXXXXXXXXXXKIETSKC 2705
SS+PE+S+ C + R + + + P+EWTS K++ +C
Sbjct: 144 DSSSHPENSE-----GCQKLGSR--LHESEAVNPKEWTSLQLTEAMSVLNKFLKVKYKRC 196
Query: 2704 GNCKAKNPSISKPTFGWIHMSGMPHADIRANLIRGCNLGESFSG--GAAATDLGDASD-- 2537
NC AKNP+I+KPTFGW H SGM + +R N+IRGC + ++FSG G+ D DAS
Sbjct: 197 KNCDAKNPAITKPTFGWFHTSGMSGSQMRENVIRGCKMADTFSGEVGSDIEDANDASSSE 256
Query: 2536 --VDTPETYALNGASLGTRDTTTRSQKGSGGVRSNFKKQKDLFSGPLLPSDVKDIIEKLW 2363
VD +T G T+T+++K V F KQK+LFSGPLLPS+VK +++ LW
Sbjct: 257 EGVDIKKTKTPEIGFKGADGTSTKARK-KAKVPLEFLKQKNLFSGPLLPSEVKKVMKLLW 315
Query: 2362 ENEFELCSFISDIQQQGFGRKPGDSIFFLGAIVVPPIKFRLPSKGGDSVMEHPQTVLLSK 2183
ENE ELCS I+ IQQQGFG K G S+FFL ++VPPIKFR P+KGGDSVMEHPQTVLLSK
Sbjct: 316 ENEIELCSLINCIQQQGFGEKVGFSMFFLETVLVPPIKFRAPTKGGDSVMEHPQTVLLSK 375
Query: 2182 VLQCNIYLANAYVN--QSEKITVARWMDLQQSVNVFFDSKNAAGQK-DMASGICQLLEKK 2012
VLQ NI L NAY N QS K+ V WMDLQQS+N+ FDSK A Q+ D++ GICQLLE+K
Sbjct: 376 VLQANISLGNAYNNDLQSSKVIVRLWMDLQQSINLLFDSKTAMSQRRDVSPGICQLLERK 435
Query: 2011 EGLFRQKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVMKLRDSI 1832
EG+FRQK+MGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNV+K+R++I
Sbjct: 436 EGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVKVREAI 495
Query: 1831 INGPEIHPGATNYLDKLSTMRLPLNKKMRISISRKLPSSRGAIMQPGKDSDYEFEGKTVY 1652
ING EIHPGAT+Y+DKLST RLP N+K RISISRKLPSSRGAI QPGK+ DY+FEGK V
Sbjct: 496 INGSEIHPGATHYVDKLSTQRLPPNRKARISISRKLPSSRGAITQPGKNFDYQFEGKIVL 555
Query: 1651 RHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFP 1472
RHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT+RMHYANCSTYNADFDGDE+NVHFP
Sbjct: 556 RHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEINVHFP 615
Query: 1471 QDEISRAEAYNIVNANDQYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFYQXXXX 1292
QDEISRAEAYNIVNAN+QYVRPSNG+PLR+LIQDHIVSA LLTK+DTFL+RDEF Q
Sbjct: 616 QDEISRAEAYNIVNANNQYVRPSNGEPLRALIQDHIVSAVLLTKRDTFLSRDEFNQLLYS 675
Query: 1291 XXXXXXXXXSFTGKPGQRVLISSSEQEVLPLLPTIWKPEPLWTGKQVITAVLNHITRGRL 1112
GK GQ+VLISSSE+ +LP+LP I KP+ LWTGKQVITAVLNHITRGR
Sbjct: 676 SGVSGLAQHPRLGKSGQKVLISSSEEGMLPILPAILKPKTLWTGKQVITAVLNHITRGRP 735
Query: 1111 PFTVERAGKLPQDFFKTRFNADXXXXXXXXXXKLSKTNKMHKDKPGKEKEDVDGKPSGGK 932
PFTVE+ GK P+DFFK R N ++KP SGG+
Sbjct: 736 PFTVEKTGKTPRDFFKNRSN---------------------ENKP----------KSGGQ 764
Query: 931 E-DDKNKSKQKELNEEKLLIYKNDLVQGVIDKAQFADYGLVHTVQEIYGSNTAGTLLSAL 755
E D K+ KE +EEK+LIYKNDLV+GVIDKAQFADYGLVHTVQE+YGSNTAG LLS
Sbjct: 765 EGKDAGKNSNKEPDEEKILIYKNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGFLLSVF 824
Query: 754 SRLFTVFLQMHGFTCGVXXXXXXXXXXKERKNHLEGSEEIGKKVHLDALELEDGAEMDPI 575
SRLFTVFLQMHGFTCGV ERK LE E+ + H + ++ AE+ PI
Sbjct: 825 SRLFTVFLQMHGFTCGVDDLLIMNDKDIERKKQLEECEKKVTEAHYEFCAVKVDAEIAPI 884
Query: 574 KLKSEIEKAIRGGGDAAVAYFDMKMTSELNKHTSSSVINDLLSEGLLKPTGKNWISLMTT 395
+L+ +IEK IR G+AA+ D M S LNK++S V+ +LLSEGL+KP G+N ISLMTT
Sbjct: 885 ELQLKIEKTIRRDGEAALTALDRTMISVLNKNSSQGVLTELLSEGLVKPMGRNCISLMTT 944
Query: 394 SGAKGSKVNFQQISAHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGL 215
+GAKGSKVNFQQIS+ LGQQELEGKRVPRMVSGKTLP FHPWDWA RAGGFI DRFLTGL
Sbjct: 945 TGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDRFLTGL 1004
Query: 214 RPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKISYDYSVRDADGSIVQFRY 35
RPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKISYD++VRDADGSIVQF Y
Sbjct: 1005 RPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSIVQFNY 1064
Query: 34 GEDGVDVHQT 5
GEDG+DVHQT
Sbjct: 1065 GEDGIDVHQT 1074
>XP_012470632.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Gossypium
raimondii] KJB19219.1 hypothetical protein
B456_003G089300 [Gossypium raimondii]
Length = 1674
Score = 1309 bits (3387), Expect = 0.0
Identities = 676/1029 (65%), Positives = 785/1029 (76%), Gaps = 9/1029 (0%)
Frame = -1
Query: 3064 VVPVYNPLLFNLLYVILKRTCFFCHHFRASRSEVEKCVRKLELIIKGDIVAAKSLDSELP 2885
V P+YNPLLFN L+ +++RTCFFC+HFRA R+EVEKC+ +L+LI KGDIV AK LDS+
Sbjct: 84 VSPIYNPLLFNFLHTLIQRTCFFCYHFRAERTEVEKCISQLKLIGKGDIVGAKRLDSDSK 143
Query: 2884 SESSNPEDSDVSNKSSCSMINPRGKYYNVKNLKPQEWTSXXXXXXXXXXXXXXKIETSKC 2705
SS+PE+S+ C + R + + + P+EWTS K++ +C
Sbjct: 144 DSSSHPENSE-----GCQKLGSR--LHESEAVNPKEWTSLQLTEAMSVLNKFLKVKYKRC 196
Query: 2704 GNCKAKNPSISKPTFGWIHMSGMPHADIRANLIRGCNLGESFSG--GAAATDLGDASD-- 2537
NC AKNP+I+KPTFGW H SGM + +R N+IRGC + ++FSG G+ D DAS
Sbjct: 197 KNCDAKNPAITKPTFGWFHTSGMSGSQMRENVIRGCKMADTFSGEVGSDIEDANDASSSE 256
Query: 2536 --VDTPETYALNGASLGTRDTTTRSQKGSGGVRSNFKKQKDLFSGPLLPSDVKDIIEKLW 2363
VD +T G T+ +++K V F KQK+LFSGPLLPS+VK +++ LW
Sbjct: 257 EGVDITKTKTPEIGFKGADGTSAKARK-KAKVPLEFLKQKNLFSGPLLPSEVKKVMKLLW 315
Query: 2362 ENEFELCSFISDIQQQGFGRKPGDSIFFLGAIVVPPIKFRLPSKGGDSVMEHPQTVLLSK 2183
ENE ELCS I+ IQQQGFG K G S+FFL ++VPPIKFR P+KGGDSVMEHPQTVLLSK
Sbjct: 316 ENEIELCSLINCIQQQGFGEKVGYSMFFLETVLVPPIKFRAPTKGGDSVMEHPQTVLLSK 375
Query: 2182 VLQCNIYLANAYVN--QSEKITVARWMDLQQSVNVFFDSKNAAGQK-DMASGICQLLEKK 2012
VLQ NI L NAY N QS K+ V WMDLQQS+N+ FDSK A Q+ D++ GICQLLE+K
Sbjct: 376 VLQANISLGNAYNNDLQSSKVIVRLWMDLQQSINLLFDSKTAMSQRRDVSPGICQLLERK 435
Query: 2011 EGLFRQKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVMKLRDSI 1832
EG+FRQK+MGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNV+KLR++I
Sbjct: 436 EGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVKLREAI 495
Query: 1831 INGPEIHPGATNYLDKLSTMRLPLNKKMRISISRKLPSSRGAIMQPGKDSDYEFEGKTVY 1652
ING E+HPGAT+Y+DKLST RLP N+K RISISRKLPSSR AI QPGK+ DYEFEGK V
Sbjct: 496 INGSELHPGATHYVDKLSTQRLPPNRKARISISRKLPSSRAAITQPGKNFDYEFEGKIVL 555
Query: 1651 RHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFP 1472
RHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT+RMHYANCSTYNADFDGDE+NVHFP
Sbjct: 556 RHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEINVHFP 615
Query: 1471 QDEISRAEAYNIVNANDQYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFYQXXXX 1292
QDEISRAEAYNIVNAN+QYVRPSNG+PLR+LIQDHIVSA LLTK+DTFL+RDEF Q
Sbjct: 616 QDEISRAEAYNIVNANNQYVRPSNGEPLRALIQDHIVSAVLLTKRDTFLSRDEFNQLLYS 675
Query: 1291 XXXXXXXXXSFTGKPGQRVLISSSEQEVLPLLPTIWKPEPLWTGKQVITAVLNHITRGRL 1112
GK GQ+VLISSSE+ +LP+LP I KP+PLWTGKQVITAVLNHITRGR
Sbjct: 676 SGVSGLAQHHRLGKSGQKVLISSSEEGMLPILPAILKPKPLWTGKQVITAVLNHITRGRP 735
Query: 1111 PFTVERAGKLPQDFFKTRFNADXXXXXXXXXXKLSKTNKMHKDKPGKEKEDVDGKPSGGK 932
PFTVE+ GK P+DFFK R N ++KP K G +
Sbjct: 736 PFTVEKTGKTPRDFFKNRSN---------------------ENKP---------KSVGQE 765
Query: 931 EDDKNKSKQKELNEEKLLIYKNDLVQGVIDKAQFADYGLVHTVQEIYGSNTAGTLLSALS 752
D ++ KE +EEK+LIYKNDLV+GVIDKAQFADYGLVHTVQE+YGSNTAG LLS S
Sbjct: 766 GKDAEENSNKEPDEEKILIYKNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGFLLSVFS 825
Query: 751 RLFTVFLQMHGFTCGVXXXXXXXXXXKERKNHLEGSEEIGKKVHLDALELEDGAEMDPIK 572
RLFTVFLQMHGFTCGV ERK LE E+ + H + ++ E+ PI+
Sbjct: 826 RLFTVFLQMHGFTCGVDDLLIMNDKDIERKKQLEECEKKVTEAHYEFCAVKVDTEIAPIE 885
Query: 571 LKSEIEKAIRGGGDAAVAYFDMKMTSELNKHTSSSVINDLLSEGLLKPTGKNWISLMTTS 392
L+ +IEK IR G+AA+ D M S LNK++S V+ +LLSEGL+KP G+N ISLMTT+
Sbjct: 886 LQLKIEKTIRRDGEAALTALDRTMISVLNKNSSQGVLTELLSEGLVKPMGRNCISLMTTT 945
Query: 391 GAKGSKVNFQQISAHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLR 212
GAKGSKVNFQQIS+ LGQQELEGKRVPRMVSGKTLP FHPWDWA RAGGFI DRFLTGLR
Sbjct: 946 GAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDRFLTGLR 1005
Query: 211 PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKISYDYSVRDADGSIVQFRYG 32
PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKISYD++VRDADGSIVQF YG
Sbjct: 1006 PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSIVQFNYG 1065
Query: 31 EDGVDVHQT 5
EDG+DVHQT
Sbjct: 1066 EDGIDVHQT 1074
>XP_016741115.1 PREDICTED: DNA-directed RNA polymerase I subunit 1-like [Gossypium
hirsutum]
Length = 1674
Score = 1306 bits (3381), Expect = 0.0
Identities = 675/1034 (65%), Positives = 785/1034 (75%), Gaps = 14/1034 (1%)
Frame = -1
Query: 3064 VVPVYNPLLFNLLYVILKRTCFFCHHFRASRSEVEKCVRKLELIIKGDIVAAKSLDSELP 2885
V P+YNPLLFN L+ +++RTCFFC+HFRA R+EVEKC+ +L+LI KGDIV AK LDS+
Sbjct: 84 VSPIYNPLLFNFLHTLIQRTCFFCYHFRAERTEVEKCISQLKLIGKGDIVGAKRLDSDSK 143
Query: 2884 SESSNPEDSDVSNKSSCSMINPRGKYYNVKNLKPQEWTSXXXXXXXXXXXXXXKIETSKC 2705
SS+PE+S+ C + R + + + P+EWTS K++ +C
Sbjct: 144 DSSSHPENSE-----GCQKLGSR--LHESEAVNPKEWTSLQLTEAMSVLNKFLKVKYKRC 196
Query: 2704 GNCKAKNPSISKPTFGWIHMSGMPHADIRANLIRGCNLGESFSGGAAATDLGDASDVDTP 2525
NC AKNP+I+KPTFGW H SGM + +R N+IRGC + ++FSG +D+ DA+D +
Sbjct: 197 KNCDAKNPAITKPTFGWFHTSGMSGSQMRENVIRGCKMADTFSG-EVGSDIEDANDASSS 255
Query: 2524 ETYALNGASLGTRDTTTRSQKGSGGVRSN----------FKKQKDLFSGPLLPSDVKDII 2375
E G + T KG+ G + F KQK+LFSGPLLPS+VK ++
Sbjct: 256 E----EGVDITKTKTPEIGFKGADGTSAKACKKAKVPLEFLKQKNLFSGPLLPSEVKKVM 311
Query: 2374 EKLWENEFELCSFISDIQQQGFGRKPGDSIFFLGAIVVPPIKFRLPSKGGDSVMEHPQTV 2195
+ LWENE ELCS I+ IQQQGFG K G S+FFL ++VPPIKFR P+KGGDSVMEHPQTV
Sbjct: 312 KLLWENEIELCSLINCIQQQGFGEKVGYSMFFLETVLVPPIKFRAPTKGGDSVMEHPQTV 371
Query: 2194 LLSKVLQCNIYLANAYVN--QSEKITVARWMDLQQSVNVFFDSKNAAGQK-DMASGICQL 2024
LLSKVLQ NI L NA+ N QS K+ V WMDLQQS+N+ FDSK A Q+ D++ GICQL
Sbjct: 372 LLSKVLQANISLGNAHNNDLQSSKVIVRLWMDLQQSINLLFDSKTAMSQRRDVSPGICQL 431
Query: 2023 LEKKEGLFRQKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVMKL 1844
LE+KEG+FRQK+MGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNV+KL
Sbjct: 432 LERKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVKL 491
Query: 1843 RDSIINGPEIHPGATNYLDKLSTMRLPLNKKMRISISRKLPSSRGAIMQPGKDSDYEFEG 1664
R++IING E+HPGAT+Y+DKLST RLP N+K RISISRKLPSSR AI QPGK+ DYEFEG
Sbjct: 492 REAIINGSELHPGATHYVDKLSTQRLPPNRKARISISRKLPSSRAAITQPGKNFDYEFEG 551
Query: 1663 KTVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMN 1484
K V RHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT+RMHYANCSTYNADFDGDE+N
Sbjct: 552 KIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEIN 611
Query: 1483 VHFPQDEISRAEAYNIVNANDQYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFYQ 1304
VHFPQDEISRAEAYNIVNAN+QYVRPSNG+PLR+LIQDHIVSA LLTK+DTFL+RDEF Q
Sbjct: 612 VHFPQDEISRAEAYNIVNANNQYVRPSNGEPLRALIQDHIVSAVLLTKRDTFLSRDEFNQ 671
Query: 1303 XXXXXXXXXXXXXSFTGKPGQRVLISSSEQEVLPLLPTIWKPEPLWTGKQVITAVLNHIT 1124
GK GQ+VLISSSE+ +LP+LP I KP+PLWTGKQVITAVLNHIT
Sbjct: 672 LLYSSGVSGLAQHHRLGKSGQKVLISSSEEGMLPILPAILKPKPLWTGKQVITAVLNHIT 731
Query: 1123 RGRLPFTVERAGKLPQDFFKTRFNADXXXXXXXXXXKLSKTNKMHKDKPGKEKEDVDGKP 944
RGR PFTVE+ GK P+DFFK R S NK+
Sbjct: 732 RGRPPFTVEKTGKTPRDFFKNR----------------SNENKL---------------K 760
Query: 943 SGGKE-DDKNKSKQKELNEEKLLIYKNDLVQGVIDKAQFADYGLVHTVQEIYGSNTAGTL 767
SGG+E D ++ KE +EEK+LIYKNDLV+GVIDKAQFADYGLVHTVQE+YGSNTAG L
Sbjct: 761 SGGQEGKDAEENSNKEPDEEKILIYKNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGFL 820
Query: 766 LSALSRLFTVFLQMHGFTCGVXXXXXXXXXXKERKNHLEGSEEIGKKVHLDALELEDGAE 587
LS SRLFTVFLQMHGFTCGV ERK LE E+ + H + ++ E
Sbjct: 821 LSVFSRLFTVFLQMHGFTCGVDDLLIMNDKDIERKKQLEECEKKVTEAHYEFCAVKVDTE 880
Query: 586 MDPIKLKSEIEKAIRGGGDAAVAYFDMKMTSELNKHTSSSVINDLLSEGLLKPTGKNWIS 407
+ PI+L+ +IEK IR G+AA+ D M S LNK++S V+ +LLSEGL+KP G+N IS
Sbjct: 881 IAPIELQLKIEKTIRRDGEAALTALDRTMISVLNKNSSQGVLTELLSEGLVKPMGRNCIS 940
Query: 406 LMTTSGAKGSKVNFQQISAHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRF 227
LMTT+GAKGSKVNFQQIS+ LGQQELEGKRVPRMVSGKTLP FHPWDWA RAGGFI DRF
Sbjct: 941 LMTTTGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDRF 1000
Query: 226 LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKISYDYSVRDADGSIV 47
LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKISYD++VRDADGSIV
Sbjct: 1001 LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSIV 1060
Query: 46 QFRYGEDGVDVHQT 5
QF YGEDG+DVHQT
Sbjct: 1061 QFNYGEDGIDVHQT 1074
>XP_016742446.1 PREDICTED: DNA-directed RNA polymerase I subunit 1-like [Gossypium
hirsutum]
Length = 1674
Score = 1304 bits (3375), Expect = 0.0
Identities = 676/1030 (65%), Positives = 786/1030 (76%), Gaps = 10/1030 (0%)
Frame = -1
Query: 3064 VVPVYNPLLFNLLYVILKRTCFFCHHFRASRSEVEKCVRKLELIIKGDIVAAKSLDSELP 2885
V P+YNPLLFN L+ +++RTCFFC+HFRA R+EVE+C+ +L+LI KGDIV AK LD++
Sbjct: 84 VSPIYNPLLFNFLHTLVQRTCFFCYHFRAERTEVERCISQLKLIGKGDIVGAKRLDTDSK 143
Query: 2884 SESSNPEDSDVSNKSSCSMINPRGKYYNVKNLKPQEWTSXXXXXXXXXXXXXXKIETSKC 2705
SS+PE+S+ C + R + + + P+EWTS K++ +C
Sbjct: 144 DSSSHPENSE-----GCQKLGSR--LHESEAVNPKEWTSLQLTEAISVLNKFLKVKYKRC 196
Query: 2704 GNCKAKNPSISKPTFGWIHMSGMPHADIRANLIRGCNLGESFSG--GAAATDLGDASD-- 2537
NC AKNP+I+KPTFGW H SGM + +R N+IRGC + ++FSG G+ D DAS
Sbjct: 197 KNCDAKNPAITKPTFGWFHTSGMSGSQMRENVIRGCKMADTFSGEVGSDIEDANDASSSE 256
Query: 2536 --VDTPETYALNGASLGTRDTTTRSQKGSGGVRSNFKKQKDLFSGPLLPSDVKDIIEKLW 2363
VD +T G T+ +++K V F KQK+LFSGPLLPS+VK +++ LW
Sbjct: 257 EGVDIKKTKTPEIGFKGADGTSAKARK-KAKVPLEFLKQKNLFSGPLLPSEVKKVMKLLW 315
Query: 2362 ENEFELCSFISDIQQQGFGRKPGDSIFFLGAIVVPPIKFRLPSKGGDSVMEHPQTVLLSK 2183
ENE ELCS I+ IQQQG G K G S+FFL ++VPPIKFR P+KGGDSVMEHPQTVLLSK
Sbjct: 316 ENEIELCSLINCIQQQGLGEKVGFSMFFLETVLVPPIKFRAPTKGGDSVMEHPQTVLLSK 375
Query: 2182 VLQCNIYLANAYVN--QSEKITVARWMDLQQSVNVFFDSKNAAGQK-DMASGICQLLEKK 2012
VL NI L NAY N QS K+ V WMDLQQS+N+ FDSK A Q+ D++ GICQLLE+K
Sbjct: 376 VLLANISLGNAYNNDLQSSKVIVRLWMDLQQSINLLFDSKTAMSQRRDVSPGICQLLERK 435
Query: 2011 EGLFRQKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVMKLRDSI 1832
EG+FRQK+MGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNV+KLR++I
Sbjct: 436 EGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVKLREAI 495
Query: 1831 INGPEIHPGATNYLDKLSTMRLPLNKKMRISISRKLPSSRGAIMQPGKDSDYEFEGKTVY 1652
ING EIHPGAT+Y+DKLST RLP N+K RISISRKLPSSRGAI QPGK+ DYEFEGK V
Sbjct: 496 INGSEIHPGATHYVDKLSTQRLPPNRKARISISRKLPSSRGAITQPGKNFDYEFEGKIVL 555
Query: 1651 RHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFP 1472
RHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT+RMHYANCSTYNADFDGDE+NVHFP
Sbjct: 556 RHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEINVHFP 615
Query: 1471 QDEISRAEAYNIVNANDQYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFYQXXXX 1292
QDEISRAEAYNIVNAN+QYVRPSNG+PLR+LIQDHIVSA LLTK+DTFL+RDEF Q
Sbjct: 616 QDEISRAEAYNIVNANNQYVRPSNGEPLRALIQDHIVSAVLLTKRDTFLSRDEFNQLLYS 675
Query: 1291 XXXXXXXXXSFTGKPGQRVLISSSEQEVLPLLPTIWKPEPLWTGKQVITAVLNHITRGRL 1112
GK GQ+VLIS+SE+ +LP+LP I KP+ LWTGKQVITAVLNHITRGR
Sbjct: 676 SGVSGLAQHPRLGKSGQKVLISNSEEGMLPILPAILKPKTLWTGKQVITAVLNHITRGRP 735
Query: 1111 PFTVERAGKLPQDFFKTRFNADXXXXXXXXXXKLSKTNKMHKDKPGKEKEDVDGKPSGGK 932
PFTVE+ GK P+DFFK R N ++KP SGG+
Sbjct: 736 PFTVEKTGKTPRDFFKNRSN---------------------ENKP----------KSGGQ 764
Query: 931 E-DDKNKSKQKELNEEKLLIYKNDLVQGVIDKAQFADYGLVHTVQEIYGSNTAGTLLSAL 755
E D K+ KE +EEK+LIYKNDLV+GVIDKAQFADYGLVHTVQE+YGSNTAG LLS
Sbjct: 765 EGKDAGKNSNKEPDEEKILIYKNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGFLLSVF 824
Query: 754 SRLFTVFLQMHGFTCGVXXXXXXXXXXKERKNHLEGSEEIGKKVHLDALELEDGAEMDPI 575
SRLFTVFLQMHGFTCGV ERK LE E+ + H + ++ AE+ PI
Sbjct: 825 SRLFTVFLQMHGFTCGVDDLLIMNDKDIERKKQLEECEKKVTEAHYEFCAVKVDAEIAPI 884
Query: 574 KLKSEIEKAIRGGGDAAVAYFDMKMTSELNKHTSSSVINDLLSEGLLKPTGKNWISLMTT 395
+L+ +IEK IR G+AA+ D M S LNK++S V+ +LLSEGL+KP G+N ISLMTT
Sbjct: 885 ELQLKIEKTIRRDGEAALTALDRTMISVLNKNSSQGVLTELLSEGLVKPMGRNCISLMTT 944
Query: 394 SGAKGSKVNFQQISAHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGL 215
+GAKGSKVNFQQIS+ LGQQELEGKRVPRMVSGKTLP FHPWDWA RAGGFI DRFLTGL
Sbjct: 945 TGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDRFLTGL 1004
Query: 214 RPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKISYDYSVRDADGSIVQFRY 35
RPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKISYD++VRDADGSIVQF Y
Sbjct: 1005 RPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSIVQFNY 1064
Query: 34 GEDGVDVHQT 5
GEDG+DVHQT
Sbjct: 1065 GEDGIDVHQT 1074
>XP_017977139.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 isoform X1
[Theobroma cacao]
Length = 1692
Score = 1297 bits (3357), Expect = 0.0
Identities = 671/1034 (64%), Positives = 792/1034 (76%), Gaps = 14/1034 (1%)
Frame = -1
Query: 3064 VVPVYNPLLFNLLYVILKRTCFFCHHFRASRSEVEKCVRKLELIIKGDIVAAKSLDSELP 2885
V P+YNPLLFN L+ +L+R CFFC+HFRA ++EVE+CV +L+LI GDIV AK LDS+
Sbjct: 84 VSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERCVSQLKLIGNGDIVGAKRLDSD-S 142
Query: 2884 SESSNPEDSDVSNKSSCSMINPRGKYYNVKNLKPQEWTSXXXXXXXXXXXXXXKIETSKC 2705
+++S+ D + ++ S S++ +N + +KP+EWTS K++ +KC
Sbjct: 143 ADASSYSDYNEGSQESGSIV------HNSEAVKPKEWTSLQLMEAMSVLNNFLKLKYNKC 196
Query: 2704 GNCKAKNPSISKPTFGWIHMSGMPHADIRANLIRGCNLGESFSGGAAATDLGDASDVDTP 2525
NC AKNP+I+KP FGW+HM+GM A +R N+IRGC + ++FS A + L DA DV +
Sbjct: 197 KNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVDTFSDDAGS-GLEDADDVSSS 255
Query: 2524 ETYALNGASLGTRDTTTRSQKGSGG-----------VRSNFKKQKDLFSGPLLPSDVKDI 2378
NG + DT+ GS G V F KQK+LFSGPLLPS+VK I
Sbjct: 256 G----NGVDIAEMDTSEIGFTGSEGNGAKARKKKAQVPLEFMKQKNLFSGPLLPSEVKKI 311
Query: 2377 IEKLWENEFELCSFISDIQQQGFGRKPGDSIFFLGAIVVPPIKFRLPSKGGDSVMEHPQT 2198
+ LWENE ELCS ISDIQQQGFG+K G S+FFL I+VPPIKFR P+KGGDSVMEHPQT
Sbjct: 312 TKLLWENEVELCSIISDIQQQGFGKKVGYSMFFLETILVPPIKFRAPTKGGDSVMEHPQT 371
Query: 2197 VLLSKVLQCNIYLANAYVN--QSEKITVARWMDLQQSVNVFFDSKNAAGQ-KDMASGICQ 2027
VLLSKVLQ NI L NAY N QS K V WMDLQQSVN+ FDSK A Q +D++SGICQ
Sbjct: 372 VLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVNLLFDSKTAMSQGRDVSSGICQ 431
Query: 2026 LLEKKEGLFRQKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVMK 1847
LLEKKEG+FRQK+MGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNV+K
Sbjct: 432 LLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVK 491
Query: 1846 LRDSIINGPEIHPGATNYLDKLSTMRLPLNKKMRISISRKLPSSRGAIMQPGKDSDYEFE 1667
LR++IING E HPGAT+Y+DKLST RLP ++K RISISRKLPSSRGAI QPGK+ DYEFE
Sbjct: 492 LREAIINGSEFHPGATHYVDKLSTKRLPPSQKARISISRKLPSSRGAIAQPGKNLDYEFE 551
Query: 1666 GKTVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEM 1487
GK V RHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT+RMHYANCSTYNADFDGDE+
Sbjct: 552 GKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEI 611
Query: 1486 NVHFPQDEISRAEAYNIVNANDQYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFY 1307
NVHFPQDEISRAEAYNIVNAN+QYVRPSNG+P+R+LIQDHIVSA LLTK+DTFL+RDEF
Sbjct: 612 NVHFPQDEISRAEAYNIVNANNQYVRPSNGEPIRALIQDHIVSAVLLTKRDTFLSRDEFN 671
Query: 1306 QXXXXXXXXXXXXXSFTGKPGQRVLISSSEQEVLPLLPTIWKPEPLWTGKQVITAVLNHI 1127
Q SF+GKPGQ+V +S+SE+ +LP++P I KP+PLWTGKQVI++VL+HI
Sbjct: 672 QLLYSSGVSSLAQNSFSGKPGQKVFVSTSEEGMLPIIPAILKPKPLWTGKQVISSVLSHI 731
Query: 1126 TRGRLPFTVERAGKLPQDFFKTRFNADXXXXXXXXXXKLSKTNKMHKDKPGKEKEDVDGK 947
TRGR PFTV + K+P+DFF+ N+ +K+K +E+ K
Sbjct: 732 TRGRPPFTVGKTAKIPRDFFR---------------------NRRNKNKQSSREEN-QPK 769
Query: 946 PSGGKEDDKNKSKQKELNEEKLLIYKNDLVQGVIDKAQFADYGLVHTVQEIYGSNTAGTL 767
G K K+ +KE +EEK+LIY+NDLV+GVIDKAQFADYGLVHTVQE+YGSNTAG L
Sbjct: 770 NDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGIL 829
Query: 766 LSALSRLFTVFLQMHGFTCGVXXXXXXXXXXKERKNHLEGSEEIGKKVHLDALELEDGAE 587
LS SRLFTVFLQMHGFTCGV ERK LE E+ + H + ++ +E
Sbjct: 830 LSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCEKKVTEAHYELFGVKVNSE 889
Query: 586 MDPIKLKSEIEKAIRGGGDAAVAYFDMKMTSELNKHTSSSVINDLLSEGLLKPTGKNWIS 407
P +L+ EIE+ IR G+ A+ D KM S LN+++S V+ +LLSEGL+K G+N IS
Sbjct: 890 TAPTELQLEIERTIRRDGETALTALDRKMISVLNENSSKGVLTELLSEGLVKSMGENCIS 949
Query: 406 LMTTSGAKGSKVNFQQISAHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRF 227
LMTTSGAKGSKVNFQQIS+ LGQQELEGKRVPRMVSGKTLP FHPWDWA RAGGFI DRF
Sbjct: 950 LMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDRF 1009
Query: 226 LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKISYDYSVRDADGSIV 47
L+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKISYD++VRDADGSIV
Sbjct: 1010 LSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSIV 1069
Query: 46 QFRYGEDGVDVHQT 5
QF YGEDG+DVHQT
Sbjct: 1070 QFIYGEDGIDVHQT 1083
>EOY09355.1 Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
Length = 1665
Score = 1297 bits (3357), Expect = 0.0
Identities = 671/1034 (64%), Positives = 792/1034 (76%), Gaps = 14/1034 (1%)
Frame = -1
Query: 3064 VVPVYNPLLFNLLYVILKRTCFFCHHFRASRSEVEKCVRKLELIIKGDIVAAKSLDSELP 2885
V P+YNPLLFN L+ +L+R CFFC+HFRA ++EVE+CV +L+LI GDIV AK LDS+
Sbjct: 84 VSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERCVSQLKLIGNGDIVGAKRLDSD-S 142
Query: 2884 SESSNPEDSDVSNKSSCSMINPRGKYYNVKNLKPQEWTSXXXXXXXXXXXXXXKIETSKC 2705
+++S+ D + ++ S S++ +N + +KP+EWTS K++ +KC
Sbjct: 143 ADASSYSDYNEGSQESGSIV------HNSEAVKPKEWTSLQLMEAMSVLNNFLKLKYNKC 196
Query: 2704 GNCKAKNPSISKPTFGWIHMSGMPHADIRANLIRGCNLGESFSGGAAATDLGDASDVDTP 2525
NC AKNP+I+KP FGW+HM+GM A +R N+IRGC + ++FS A + L DA DV +
Sbjct: 197 KNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVDTFSD-EAGSGLEDADDVSSS 255
Query: 2524 ETYALNGASLGTRDTTTRSQKGSGG-----------VRSNFKKQKDLFSGPLLPSDVKDI 2378
NG + DT+ GS G V F KQK+LFSGPLLPS+VK I
Sbjct: 256 G----NGVDIAEMDTSEIGFTGSEGNGAKARKKKAQVPLEFMKQKNLFSGPLLPSEVKKI 311
Query: 2377 IEKLWENEFELCSFISDIQQQGFGRKPGDSIFFLGAIVVPPIKFRLPSKGGDSVMEHPQT 2198
+ LWENE ELCS ISDIQQQGFG+K G S+FFL I+VPPIKFR P+KGGDSVMEHPQT
Sbjct: 312 TKLLWENEVELCSIISDIQQQGFGKKVGYSMFFLETILVPPIKFRAPTKGGDSVMEHPQT 371
Query: 2197 VLLSKVLQCNIYLANAYVN--QSEKITVARWMDLQQSVNVFFDSKNAAGQ-KDMASGICQ 2027
VLLSKVLQ NI L NAY N QS K V WMDLQQSVN+ FDSK A Q +D++SGICQ
Sbjct: 372 VLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVNLLFDSKTAMSQGRDVSSGICQ 431
Query: 2026 LLEKKEGLFRQKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVMK 1847
LLEKKEG+FRQK+MGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNV+K
Sbjct: 432 LLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVK 491
Query: 1846 LRDSIINGPEIHPGATNYLDKLSTMRLPLNKKMRISISRKLPSSRGAIMQPGKDSDYEFE 1667
LR++IING E HPGAT+Y+DKLST RLP ++K RISISRKLPSSRGAI QPGK+ DYEFE
Sbjct: 492 LREAIINGSEFHPGATHYVDKLSTKRLPPSQKARISISRKLPSSRGAIAQPGKNLDYEFE 551
Query: 1666 GKTVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEM 1487
GK V RHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT+RMHYANCSTYNADFDGDE+
Sbjct: 552 GKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEI 611
Query: 1486 NVHFPQDEISRAEAYNIVNANDQYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFY 1307
NVHFPQDEISRAEAYNIVNAN+QYVRPSNG+P+R+LIQDHIVSA LLTK+DTFL+RDEF
Sbjct: 612 NVHFPQDEISRAEAYNIVNANNQYVRPSNGEPIRALIQDHIVSAVLLTKRDTFLSRDEFN 671
Query: 1306 QXXXXXXXXXXXXXSFTGKPGQRVLISSSEQEVLPLLPTIWKPEPLWTGKQVITAVLNHI 1127
Q SF+GKPGQ+V +S+SE+ +LP++P I KP+PLWTGKQVI++VL+HI
Sbjct: 672 QLLYSSGVSSLAQNSFSGKPGQKVFVSTSEEGMLPIIPAILKPKPLWTGKQVISSVLSHI 731
Query: 1126 TRGRLPFTVERAGKLPQDFFKTRFNADXXXXXXXXXXKLSKTNKMHKDKPGKEKEDVDGK 947
TRGR PFTV + K+P+DFF+ N+ +K+K +E+ K
Sbjct: 732 TRGRPPFTVGKTAKIPRDFFR---------------------NRRNKNKQSSREEN-QPK 769
Query: 946 PSGGKEDDKNKSKQKELNEEKLLIYKNDLVQGVIDKAQFADYGLVHTVQEIYGSNTAGTL 767
G K K+ +KE +EEK+LIY+NDLV+GVIDKAQFADYGLVHTVQE+YGSNTAG L
Sbjct: 770 NDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGIL 829
Query: 766 LSALSRLFTVFLQMHGFTCGVXXXXXXXXXXKERKNHLEGSEEIGKKVHLDALELEDGAE 587
LS SRLFTVFLQMHGFTCGV ERK LE E+ + H + ++ +E
Sbjct: 830 LSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCEKKVTEAHYELFGVKVNSE 889
Query: 586 MDPIKLKSEIEKAIRGGGDAAVAYFDMKMTSELNKHTSSSVINDLLSEGLLKPTGKNWIS 407
P +L+ EIE+ IR G+ A+ D KM S LN+++S V+ +LLSEGL+K G+N IS
Sbjct: 890 TAPTELQLEIERTIRRDGETALTALDRKMISVLNENSSKGVLTELLSEGLVKSMGENCIS 949
Query: 406 LMTTSGAKGSKVNFQQISAHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRF 227
LMTTSGAKGSKVNFQQIS+ LGQQELEGKRVPRMVSGKTLP FHPWDWA RAGGFI DRF
Sbjct: 950 LMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDRF 1009
Query: 226 LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKISYDYSVRDADGSIV 47
L+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKISYD++VRDADGSIV
Sbjct: 1010 LSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSIV 1069
Query: 46 QFRYGEDGVDVHQT 5
QF YGEDG+DVHQT
Sbjct: 1070 QFIYGEDGIDVHQT 1083
>XP_012073009.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Jatropha
curcas]
Length = 1741
Score = 1295 bits (3351), Expect = 0.0
Identities = 663/1028 (64%), Positives = 785/1028 (76%), Gaps = 8/1028 (0%)
Frame = -1
Query: 3064 VVPVYNPLLFNLLYVILKRTCFFCHHFRASRSEVEKCVRKLELIIKGDIVAAKSLDSELP 2885
V PVYNPLLFN L+ +L+RTCF+C HFR R +V+KCV++LELI+KGDIV AK LDS LP
Sbjct: 84 VSPVYNPLLFNFLHKLLQRTCFYCFHFRIHRGQVDKCVKQLELIVKGDIVGAKRLDSVLP 143
Query: 2884 SESSNPEDSDVSNKSSCSMINPRGKYYNVKNLKPQEWTSXXXXXXXXXXXXXXKIETSKC 2705
SE+ PE+SD S++S CS ++ + +N +++K +EWTS + KC
Sbjct: 144 SETLYPEESDGSHES-CSTVHSGAQCHNGEHMKQKEWTSLQFSEATSVLNTFLMPKFKKC 202
Query: 2704 GNCKAKNPSISKPTFGWIHMSGMPHADIRANLIRGCNLGESFSGGAAATDLGDASDVDTP 2525
NC A NP+I+KP FGW + SGM A IRAN+IRG LG G ++ + +DV+
Sbjct: 203 KNCGAVNPNITKPMFGWFYTSGMTDASIRANIIRGRQLG-----GPLVAEVDEMTDVEE- 256
Query: 2524 ETYALNGASLGTRDTTTRSQKGSGGVRSN-FKKQKDLFSGPLLPSDVKDIIEKLWENEFE 2348
+ G +DT + K G + F KQ+ FS LLPS+VKD ++ LWENE
Sbjct: 257 -----SAEPSGNQDTDVKRHKKKGSQEAREFYKQRSAFSKQLLPSEVKDALDLLWENEDR 311
Query: 2347 LCSFISDIQQQGFGRKP-GDSIFFLGAIVVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQC 2171
+CSFISD+QQQGFG+K G S+FFL I+V IKFR P+KGGDSV EHPQTVLLSKVL+
Sbjct: 312 ICSFISDLQQQGFGKKKAGPSMFFLETILVAAIKFRPPTKGGDSVREHPQTVLLSKVLEA 371
Query: 2170 NIYLANAYVNQSEKITVARWMDLQQSVNVFFDSKNAAG--QKDMASGICQLLEKKEGLFR 1997
NIYL +A++N+ V RWMDLQQS+N+ FDSK A G Q+D+ SGICQLLEKKEGLFR
Sbjct: 372 NIYLGDAHINKEHSKIVRRWMDLQQSINILFDSKTAKGPGQRDVTSGICQLLEKKEGLFR 431
Query: 1996 QKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVMKLRDSIINGPE 1817
QK+MGKRVNYACRSVISPDPYL VNEIGIPP FA++LTYPERVTPWNV KLR+++ NG E
Sbjct: 432 QKMMGKRVNYACRSVISPDPYLGVNEIGIPPCFAVKLTYPERVTPWNVAKLRNAVFNGSE 491
Query: 1816 IHPGATNYLDKLSTMRLPLNKKMRISISRKLPSSRGAIMQPGKDSDYEFEGKTVYRHLQD 1637
HPGAT+Y+DKLST +LP+ +KMRI+ISRKLPSSRGAIMQPGK SD E+EGK VYRHLQD
Sbjct: 492 SHPGATHYVDKLSTNKLPVARKMRIAISRKLPSSRGAIMQPGKSSDCEYEGKIVYRHLQD 551
Query: 1636 GDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEIS 1457
GDVVL NRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDE+S
Sbjct: 552 GDVVLCNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDELS 611
Query: 1456 RAEAYNIVNANDQYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFYQXXXXXXXXX 1277
RAEAY IVNAN+QYVRPSNG+PLR LIQDHI+S+ LLTKKDTFL++DEF Q
Sbjct: 612 RAEAYGIVNANNQYVRPSNGEPLRGLIQDHIISSVLLTKKDTFLSQDEFNQLLYSSGVST 671
Query: 1276 XXXXSFTGKPGQRVLISSSEQEVLPLLPTIWKPEPLWTGKQVITAVLNHITRGRLPFTVE 1097
SF G+PGQ+VL S SE E+ L P IWKPEPLWTGKQVI+AVLNHITRG PFTVE
Sbjct: 672 AGSTSFHGRPGQKVLWSRSEDEIQTLPPAIWKPEPLWTGKQVISAVLNHITRGHPPFTVE 731
Query: 1096 RAGKLPQDFFKTRFNADXXXXXXXXXXKLSKTNKMHKDKPGKEKEDVDGK---PSGGKED 926
+ K+P +FF +R + + D+ K+K DV K K+
Sbjct: 732 KEAKIPTNFFNSR------------AKEYKPCDGKKSDEDKKQKSDVKEKRFNEDKQKKP 779
Query: 925 DKNKSKQKELNEEKLLIYKNDLVQGVIDKAQFADYGLVHTVQEIYGSNTAGTLLSALSRL 746
DKN ++KE +EE +LIY+N+LV+GVIDKAQF +YGLVHTV E++GSNTAG LLSALSRL
Sbjct: 780 DKNTPQKKEPDEEIMLIYRNELVRGVIDKAQFGEYGLVHTVHELFGSNTAGVLLSALSRL 839
Query: 745 FTVFLQMHGFTCGVXXXXXXXXXXKERKNHLEGSEEIGKKVHLDALELED-GAEMDPIKL 569
FT +LQMHGFTCGV ERK LE E G+ VH + + ++D E+DP++L
Sbjct: 840 FTAYLQMHGFTCGVDDLLIMESIDDERKKLLESCERSGEAVHRNFIGIKDESIEIDPVEL 899
Query: 568 KSEIEKAIRGGGDAAVAYFDMKMTSELNKHTSSSVINDLLSEGLLKPTGKNWISLMTTSG 389
+ IE+ IR GD+A++Y D +M++ELN TSS VIN LLS+GLLKP+GKN ISLMTTSG
Sbjct: 900 QLNIERTIRSDGDSALSYLDRQMSNELNTKTSSGVINKLLSDGLLKPSGKNCISLMTTSG 959
Query: 388 AKGSKVNFQQISAHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRP 209
AKGSKVNFQQIS+ LGQQELEGKRVPRMVSGKTLP FHPWDWA RAGG+IIDRFLTGLRP
Sbjct: 960 AKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGYIIDRFLTGLRP 1019
Query: 208 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKISYDYSVRDADGSIVQFRYGE 29
QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKISYD++VRDADGS+VQF YGE
Sbjct: 1020 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSVVQFYYGE 1079
Query: 28 DGVDVHQT 5
DGVDVH+T
Sbjct: 1080 DGVDVHRT 1087
>XP_018842360.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 [Juglans regia]
XP_018842361.1 PREDICTED: DNA-directed RNA polymerase I
subunit 1 [Juglans regia]
Length = 1708
Score = 1293 bits (3346), Expect = 0.0
Identities = 675/1039 (64%), Positives = 785/1039 (75%), Gaps = 19/1039 (1%)
Frame = -1
Query: 3064 VVPVYNPLLFNLLYVILKRTCFFCHHFRASRSEVEKCVRKLELIIKGDIVAAKSLDSELP 2885
V P YNPLLFN+LY +L+RTC FCHHFRASRS+VE C+ +L+LI+KGD+V AK LDS+ P
Sbjct: 84 VSPAYNPLLFNILYNLLQRTCLFCHHFRASRSQVETCISQLKLIVKGDVVGAKRLDSDTP 143
Query: 2884 SESSNPEDSDVSNKSSCSMINPRGKYYNVKNLKPQEWTSXXXXXXXXXXXXXXKIETSKC 2705
E+S P D D S ++ K L+ Q WTS + C
Sbjct: 144 GETSYPNDGDWSQS------------HDAKYLRRQGWTSLQFMEAMSVFKKFLRPRFVVC 191
Query: 2704 GNCKAKNPSISKPTFGWIHMSGMPHADIRANLIRGCNLGESFSGGAAATDLGDASD---- 2537
+C AKNP ISKPTFGW HMSGM AD R N IRGC LG S +GG L + +
Sbjct: 192 KSCGAKNPKISKPTFGWFHMSGMSGADARRNAIRGCKLGRSATGGTNGKSLPEVENTDDM 251
Query: 2536 ------VDTPETYALNGASLGTRDTTTRSQKGSGG-VRSNFKKQKDLFSGPLLPSDVKDI 2378
VD ET + AS G +D+ T+ Q+ GG + +F KQKDLFSGPLLPS+VK+I
Sbjct: 252 TQWGDVVDIVETDPSSVASPGAKDSATKKQRKKGGELLLDFVKQKDLFSGPLLPSEVKEI 311
Query: 2377 IEKLWENEFELCSFISDIQQQGFGRKPGD-----SIFFLGAIVVPPIKFRLPSKGGDSVM 2213
++ LWENE +LCSFISDIQ QGF K + S+FFL I+VPPIKFR PSKGGDSVM
Sbjct: 312 VKLLWENESQLCSFISDIQHQGFKVKDSEPKTDYSMFFLETILVPPIKFRPPSKGGDSVM 371
Query: 2212 EHPQTVLLSKVLQCNIYLANAYVNQSEKIT-VARWMDLQQSVNVFFDSKNAAGQ--KDMA 2042
EHPQTVLL KVLQ NI L NA+VN E+ V+RWMDLQQS+NV FDSK A GQ +++A
Sbjct: 372 EHPQTVLLGKVLQSNISLGNAHVNNLERSKIVSRWMDLQQSINVLFDSKTATGQGQRNVA 431
Query: 2041 SGICQLLEKKEGLFRQKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTP 1862
SGICQLLEKKEG+FRQK+MGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTP
Sbjct: 432 SGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTP 491
Query: 1861 WNVMKLRDSIINGPEIHPGATNYLDKLSTMRLPLNKKMRISISRKLPSSRGAIMQPGKDS 1682
WNV+KLR++IING +IHPGAT Y DKL T +LP ++K RI+ISRKLPSSRG + Q GK
Sbjct: 492 WNVVKLRNAIINGSDIHPGATQYGDKLDTKQLPPSRKGRIAISRKLPSSRGLLTQHGKSC 551
Query: 1681 DYEFEGKTVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADF 1502
DYEFEGK V RHLQDGD+VLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADF
Sbjct: 552 DYEFEGKFVRRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADF 611
Query: 1501 DGDEMNVHFPQDEISRAEAYNIVNANDQYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLN 1322
DGDEMNVHFPQDEISRAEAYNIVNAN+QYV+P++G+P+R+LIQDH+VSA LLTKKDTF
Sbjct: 612 DGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHVVSAVLLTKKDTFFT 671
Query: 1321 RDEFYQXXXXXXXXXXXXXSFTGKPGQRVLISSSEQEVLPLLPTIWKPEPLWTGKQVITA 1142
DEF Q SF GK GQ+V + +SE E+ PLLP IWKP PLWTGKQVI+A
Sbjct: 672 GDEFNQLLYCAGISTARPVSFLGKFGQKVCMLNSEDEMQPLLPAIWKPVPLWTGKQVISA 731
Query: 1141 VLNHITRGRLPFTVERAGKLPQDFFKTRFNADXXXXXXXXXXKLSKTNKMHKDKPGKEKE 962
+LNHIT+G PFTVE+ KLP+DFFK+ + D +L+K K K K KE+
Sbjct: 732 LLNHITKGHPPFTVEKDAKLPRDFFKSGSDED----------ELNKEEKADK-KGTKERV 780
Query: 961 DVDGKPSGGKEDDKNKSKQKELNEEKLLIYKNDLVQGVIDKAQFADYGLVHTVQEIYGSN 782
D K S GK D N SK+KE +E+KLLIY+NDLV+GVIDKAQF +YGLVHTVQE+YGSN
Sbjct: 781 LDDKKLSKGKRVDGNASKKKEPDEDKLLIYRNDLVRGVIDKAQFGEYGLVHTVQELYGSN 840
Query: 781 TAGTLLSALSRLFTVFLQMHGFTCGVXXXXXXXXXXKERKNHLEGSEEIGKKVHLDALEL 602
TAG LLSALSRLFT FLQ+HGFTCGV +R +L+ E++G++VH +
Sbjct: 841 TAGILLSALSRLFTAFLQVHGFTCGVDDLLLMKKKDDDRDKNLQDCEKVGEEVHRMFVSD 900
Query: 601 EDGAEMDPIKLKSEIEKAIRGGGDAAVAYFDMKMTSELNKHTSSSVINDLLSEGLLKPTG 422
+ G ++D ++LK IE+ IR G+ A+ D KM S+LN+ S + +LLS GLLKP+G
Sbjct: 901 KGGDKIDLLQLK--IEEKIRSNGEPALTDLDRKMISKLNEELSKNFFKELLSRGLLKPSG 958
Query: 421 KNWISLMTTSGAKGSKVNFQQISAHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGF 242
KN ISLMTTSGAKG+ VNFQQIS+HLGQQELEGKRVPRMVSGKTLP F PWDWA RAGGF
Sbjct: 959 KNCISLMTTSGAKGASVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFPPWDWAARAGGF 1018
Query: 241 IIDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKISYDYSVRDA 62
IIDRFLTGL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKI YD++VRDA
Sbjct: 1019 IIDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKICYDHTVRDA 1078
Query: 61 DGSIVQFRYGEDGVDVHQT 5
DGSI+QF YGEDGVDVHQT
Sbjct: 1079 DGSIIQFCYGEDGVDVHQT 1097
>XP_007028854.2 PREDICTED: DNA-directed RNA polymerase I subunit 1 isoform X2
[Theobroma cacao]
Length = 1689
Score = 1291 bits (3340), Expect = 0.0
Identities = 670/1034 (64%), Positives = 791/1034 (76%), Gaps = 14/1034 (1%)
Frame = -1
Query: 3064 VVPVYNPLLFNLLYVILKRTCFFCHHFRASRSEVEKCVRKLELIIKGDIVAAKSLDSELP 2885
V P+YNPLLFN L+ +L+R CFFC+HFRA ++EVE+CV +L+LI GDIV AK LDS+
Sbjct: 84 VSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERCVSQLKLIGNGDIVGAKRLDSD-S 142
Query: 2884 SESSNPEDSDVSNKSSCSMINPRGKYYNVKNLKPQEWTSXXXXXXXXXXXXXXKIETSKC 2705
+++S+ D + ++ S S++ +N + +KP+EWTS K++ +KC
Sbjct: 143 ADASSYSDYNEGSQESGSIV------HNSEAVKPKEWTSLQLMEAMSVLNNFLKLKYNKC 196
Query: 2704 GNCKAKNPSISKPTFGWIHMSGMPHADIRANLIRGCNLGESFSGGAAATDLGDASDVDTP 2525
NC AKNP+I+KP FGW+HM+GM A +R N+IRGC + ++FS A + L DA DV +
Sbjct: 197 KNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVDTFSDDAGS-GLEDADDVSSS 255
Query: 2524 ETYALNGASLGTRDTTTRSQKGSGG-----------VRSNFKKQKDLFSGPLLPSDVKDI 2378
NG + DT+ GS G V F KQK+LFSGPLLPS+VK I
Sbjct: 256 G----NGVDIAEMDTSEIGFTGSEGNGAKARKKKAQVPLEFMKQKNLFSGPLLPSEVKKI 311
Query: 2377 IEKLWENEFELCSFISDIQQQGFGRKPGDSIFFLGAIVVPPIKFRLPSKGGDSVMEHPQT 2198
+ LWENE ELCS ISDIQQQGFG+K G S+FFL I+VPPIKFR P+KGGDSVMEHPQT
Sbjct: 312 TKLLWENEVELCSIISDIQQQGFGKKVGYSMFFLETILVPPIKFRAPTKGGDSVMEHPQT 371
Query: 2197 VLLSKVLQCNIYLANAYVN--QSEKITVARWMDLQQSVNVFFDSKNAAGQ-KDMASGICQ 2027
VLLSKVLQ NI L NAY N QS K V WMDLQQSVN+ FDSK A Q +D++SGICQ
Sbjct: 372 VLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVNLLFDSKTAMSQGRDVSSGICQ 431
Query: 2026 LLEKKEGLFRQKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVMK 1847
LLEKKEG+FRQK+MGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNV+K
Sbjct: 432 LLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVK 491
Query: 1846 LRDSIINGPEIHPGATNYLDKLSTMRLPLNKKMRISISRKLPSSRGAIMQPGKDSDYEFE 1667
LR++IING E HPGAT+Y+DKLST RLP ++K RISISRKLPSSRGAI QPGK+ DYEFE
Sbjct: 492 LREAIINGSEFHPGATHYVDKLSTKRLPPSQKARISISRKLPSSRGAIAQPGKNLDYEFE 551
Query: 1666 GKTVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEM 1487
GK V RHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT+RMHYANCSTYNADFDGDE+
Sbjct: 552 GKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEI 611
Query: 1486 NVHFPQDEISRAEAYNIVNANDQYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFY 1307
NVHFPQDEISRAEAYNIVNAN+QYVRPSNG+P+R+LIQDHIVSA LLTK+DTFL+RDEF
Sbjct: 612 NVHFPQDEISRAEAYNIVNANNQYVRPSNGEPIRALIQDHIVSAVLLTKRDTFLSRDEFN 671
Query: 1306 QXXXXXXXXXXXXXSFTGKPGQRVLISSSEQEVLPLLPTIWKPEPLWTGKQVITAVLNHI 1127
Q SF+GKPGQ+V +S+SE+ +LP++P I KP+PLWTGKQVI++VL+HI
Sbjct: 672 QLLYSSGVSSLAQNSFSGKPGQKVFVSTSEEGMLPIIPAILKPKPLWTGKQVISSVLSHI 731
Query: 1126 TRGRLPFTVERAGKLPQDFFKTRFNADXXXXXXXXXXKLSKTNKMHKDKPGKEKEDVDGK 947
TRGR PFTV + K+P+DFF+ N+ +K+K +E+ K
Sbjct: 732 TRGRPPFTVGKTAKIPRDFFR---------------------NRRNKNKQSSREEN-QPK 769
Query: 946 PSGGKEDDKNKSKQKELNEEKLLIYKNDLVQGVIDKAQFADYGLVHTVQEIYGSNTAGTL 767
G K K+ +KE +EEK+LIY+NDLV+GVIDKAQFADYGLVHTVQE+YGSNTAG L
Sbjct: 770 NDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGIL 829
Query: 766 LSALSRLFTVFLQMHGFTCGVXXXXXXXXXXKERKNHLEGSEEIGKKVHLDALELEDGAE 587
LS SRLFTVFLQMHGFTCGV ERK LE E+ + H + ++ +E
Sbjct: 830 LSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCEKKVTEAHYELFGVKVNSE 889
Query: 586 MDPIKLKSEIEKAIRGGGDAAVAYFDMKMTSELNKHTSSSVINDLLSEGLLKPTGKNWIS 407
+ L+ EIE+ IR G+ A+ D KM S LN+++S V+ +LLSEGL+K G+N IS
Sbjct: 890 TE---LQLEIERTIRRDGETALTALDRKMISVLNENSSKGVLTELLSEGLVKSMGENCIS 946
Query: 406 LMTTSGAKGSKVNFQQISAHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRF 227
LMTTSGAKGSKVNFQQIS+ LGQQELEGKRVPRMVSGKTLP FHPWDWA RAGGFI DRF
Sbjct: 947 LMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDRF 1006
Query: 226 LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKISYDYSVRDADGSIV 47
L+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKISYD++VRDADGSIV
Sbjct: 1007 LSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSIV 1066
Query: 46 QFRYGEDGVDVHQT 5
QF YGEDG+DVHQT
Sbjct: 1067 QFIYGEDGIDVHQT 1080
>EOY09356.1 Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
Length = 1689
Score = 1291 bits (3340), Expect = 0.0
Identities = 670/1034 (64%), Positives = 791/1034 (76%), Gaps = 14/1034 (1%)
Frame = -1
Query: 3064 VVPVYNPLLFNLLYVILKRTCFFCHHFRASRSEVEKCVRKLELIIKGDIVAAKSLDSELP 2885
V P+YNPLLFN L+ +L+R CFFC+HFRA ++EVE+CV +L+LI GDIV AK LDS+
Sbjct: 84 VSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERCVSQLKLIGNGDIVGAKRLDSD-S 142
Query: 2884 SESSNPEDSDVSNKSSCSMINPRGKYYNVKNLKPQEWTSXXXXXXXXXXXXXXKIETSKC 2705
+++S+ D + ++ S S++ +N + +KP+EWTS K++ +KC
Sbjct: 143 ADASSYSDYNEGSQESGSIV------HNSEAVKPKEWTSLQLMEAMSVLNNFLKLKYNKC 196
Query: 2704 GNCKAKNPSISKPTFGWIHMSGMPHADIRANLIRGCNLGESFSGGAAATDLGDASDVDTP 2525
NC AKNP+I+KP FGW+HM+GM A +R N+IRGC + ++FS A + L DA DV +
Sbjct: 197 KNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVDTFSD-EAGSGLEDADDVSSS 255
Query: 2524 ETYALNGASLGTRDTTTRSQKGSGG-----------VRSNFKKQKDLFSGPLLPSDVKDI 2378
NG + DT+ GS G V F KQK+LFSGPLLPS+VK I
Sbjct: 256 G----NGVDIAEMDTSEIGFTGSEGNGAKARKKKAQVPLEFMKQKNLFSGPLLPSEVKKI 311
Query: 2377 IEKLWENEFELCSFISDIQQQGFGRKPGDSIFFLGAIVVPPIKFRLPSKGGDSVMEHPQT 2198
+ LWENE ELCS ISDIQQQGFG+K G S+FFL I+VPPIKFR P+KGGDSVMEHPQT
Sbjct: 312 TKLLWENEVELCSIISDIQQQGFGKKVGYSMFFLETILVPPIKFRAPTKGGDSVMEHPQT 371
Query: 2197 VLLSKVLQCNIYLANAYVN--QSEKITVARWMDLQQSVNVFFDSKNAAGQ-KDMASGICQ 2027
VLLSKVLQ NI L NAY N QS K V WMDLQQSVN+ FDSK A Q +D++SGICQ
Sbjct: 372 VLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVNLLFDSKTAMSQGRDVSSGICQ 431
Query: 2026 LLEKKEGLFRQKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVMK 1847
LLEKKEG+FRQK+MGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNV+K
Sbjct: 432 LLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVK 491
Query: 1846 LRDSIINGPEIHPGATNYLDKLSTMRLPLNKKMRISISRKLPSSRGAIMQPGKDSDYEFE 1667
LR++IING E HPGAT+Y+DKLST RLP ++K RISISRKLPSSRGAI QPGK+ DYEFE
Sbjct: 492 LREAIINGSEFHPGATHYVDKLSTKRLPPSQKARISISRKLPSSRGAIAQPGKNLDYEFE 551
Query: 1666 GKTVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEM 1487
GK V RHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT+RMHYANCSTYNADFDGDE+
Sbjct: 552 GKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEI 611
Query: 1486 NVHFPQDEISRAEAYNIVNANDQYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFY 1307
NVHFPQDEISRAEAYNIVNAN+QYVRPSNG+P+R+LIQDHIVSA LLTK+DTFL+RDEF
Sbjct: 612 NVHFPQDEISRAEAYNIVNANNQYVRPSNGEPIRALIQDHIVSAVLLTKRDTFLSRDEFN 671
Query: 1306 QXXXXXXXXXXXXXSFTGKPGQRVLISSSEQEVLPLLPTIWKPEPLWTGKQVITAVLNHI 1127
Q SF+GKPGQ+V +S+SE+ +LP++P I KP+PLWTGKQVI++VL+HI
Sbjct: 672 QLLYSSGVSSLAQNSFSGKPGQKVFVSTSEEGMLPIIPAILKPKPLWTGKQVISSVLSHI 731
Query: 1126 TRGRLPFTVERAGKLPQDFFKTRFNADXXXXXXXXXXKLSKTNKMHKDKPGKEKEDVDGK 947
TRGR PFTV + K+P+DFF+ N+ +K+K +E+ K
Sbjct: 732 TRGRPPFTVGKTAKIPRDFFR---------------------NRRNKNKQSSREEN-QPK 769
Query: 946 PSGGKEDDKNKSKQKELNEEKLLIYKNDLVQGVIDKAQFADYGLVHTVQEIYGSNTAGTL 767
G K K+ +KE +EEK+LIY+NDLV+GVIDKAQFADYGLVHTVQE+YGSNTAG L
Sbjct: 770 NDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGIL 829
Query: 766 LSALSRLFTVFLQMHGFTCGVXXXXXXXXXXKERKNHLEGSEEIGKKVHLDALELEDGAE 587
LS SRLFTVFLQMHGFTCGV ERK LE E+ + H + ++ +E
Sbjct: 830 LSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCEKKVTEAHYELFGVKVNSE 889
Query: 586 MDPIKLKSEIEKAIRGGGDAAVAYFDMKMTSELNKHTSSSVINDLLSEGLLKPTGKNWIS 407
+ L+ EIE+ IR G+ A+ D KM S LN+++S V+ +LLSEGL+K G+N IS
Sbjct: 890 TE---LQLEIERTIRRDGETALTALDRKMISVLNENSSKGVLTELLSEGLVKSMGENCIS 946
Query: 406 LMTTSGAKGSKVNFQQISAHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRF 227
LMTTSGAKGSKVNFQQIS+ LGQQELEGKRVPRMVSGKTLP FHPWDWA RAGGFI DRF
Sbjct: 947 LMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDRF 1006
Query: 226 LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKISYDYSVRDADGSIV 47
L+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKISYD++VRDADGSIV
Sbjct: 1007 LSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSIV 1066
Query: 46 QFRYGEDGVDVHQT 5
QF YGEDG+DVHQT
Sbjct: 1067 QFIYGEDGIDVHQT 1080
>GAV72253.1 RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1_3
domain-containing protein/RNA_pol_Rpb1_1
domain-containing protein/RNA_pol_Rpb1_5
domain-containing protein/RNA_pol_Rpb1_4
domain-containing protein [Cephalotus follicularis]
Length = 1718
Score = 1275 bits (3300), Expect = 0.0
Identities = 664/1032 (64%), Positives = 776/1032 (75%), Gaps = 12/1032 (1%)
Frame = -1
Query: 3064 VVPVYNPLLFNLLYVILKRTCFFCHHFRASRSEVEKCVRKLELIIKGDIVAAKSLDSELP 2885
V P YNPLLFN LY +L+RTCF C HFRASR +V K V +LELI KGDIV AKSLDS LP
Sbjct: 86 VYPAYNPLLFNFLYNLLQRTCFHCCHFRASRDQVRKIVSQLELIAKGDIVGAKSLDSALP 145
Query: 2884 SESSNPEDSDVSNKSSCSMINPRGKYYNVKNLKPQEWTSXXXXXXXXXXXXXXKIETSKC 2705
S SS EDSDVS++S CS ++ + ++ K++ + TS K KC
Sbjct: 146 SLSSYSEDSDVSHES-CSTVHSGEQDHDAKHIDREGRTSLQFSEARSVLTSFLKPRFLKC 204
Query: 2704 GNCKAKNPSISKPTFGWIHMSGMPHADIRANLIRGCNLGESFSGGAAATDLGDASDVDTP 2525
NC NP I KPTFGWIH SG+ IRAN+I G LGE +D G D +
Sbjct: 205 KNCNKTNPKIRKPTFGWIHKSGLSSVQIRANVITGYKLGEP-------SDDGVIEDTNDT 257
Query: 2524 ETYALNGASLGTRDTTTRSQKGSGGVRS----NFKKQKDLFSGPLLPSDVKDIIEKLWEN 2357
++ + AS G+ + ++ + G +F ++K FSG LPS+VKDI+++LWEN
Sbjct: 258 ISWGDDVASAGSHEIKKKNTRSRGRKEEQGPLDFTREKKSFSGSFLPSEVKDIVKELWEN 317
Query: 2356 EFELCSFISDIQQQGFGRKPGDSIFFLGAIVVPPIKFRLPSKGGDSVMEHPQTVLLSKVL 2177
E +LCSFISDIQQQG G K G S+FFL ++V PIKFR P+ V+ HPQT LL K+L
Sbjct: 318 EVDLCSFISDIQQQGLGEKAGHSMFFLDTVLVSPIKFRSPTYQDGEVIHHPQTDLLKKLL 377
Query: 2176 QCNIYLANAYVNQSEKIT-----VARWMDLQQSVNVFFDSKNAAGQKDMAS--GICQLLE 2018
+ NI L A N E V+RWM LQQS+N+ FDSK A GQ ++ GICQLLE
Sbjct: 378 ESNISLGEAVGNAKENKLKYSKIVSRWMALQQSINLLFDSKTAMGQGQRSAIVGICQLLE 437
Query: 2017 KKEGLFRQKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVMKLRD 1838
KKEG+FRQK+MGKRVN+ACRSVISPDPYLAVNEIGIPPYFA+RLTYPERVT NV+KLR+
Sbjct: 438 KKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAVRLTYPERVTTSNVVKLRN 497
Query: 1837 SIINGPEIHPGATNYLDKLSTMRLPLNKKMRISISRKLPSSRGAIMQPGKDSDYEFEGKT 1658
+IINGP++HPGAT+Y+D+LST +L ++K RISISRKLPSSRGA++QPGK D EFEGK
Sbjct: 498 AIINGPDVHPGATHYVDRLSTTKLTGSRKTRISISRKLPSSRGAVIQPGKSCDNEFEGKI 557
Query: 1657 VYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVH 1478
VYRHLQDGDVVLVNRQPTLHKPSIMAH+VRVLKGEKT+RMHYANCSTYNADFDGDEMNVH
Sbjct: 558 VYRHLQDGDVVLVNRQPTLHKPSIMAHIVRVLKGEKTIRMHYANCSTYNADFDGDEMNVH 617
Query: 1477 FPQDEISRAEAYNIVNANDQYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFYQXX 1298
FPQDEISRAEAYNIVNAN+QYVRPSNGDP+R+LIQDHI+SA LLTK+DTFL+R+EF Q
Sbjct: 618 FPQDEISRAEAYNIVNANNQYVRPSNGDPIRALIQDHIISAVLLTKRDTFLSREEFNQLL 677
Query: 1297 XXXXXXXXXXXSFTGKPGQRVLISSSEQEVLPLLPTIWKPEPLWTGKQVITAVLNHITRG 1118
SF+GKPG++V ISSSE+E L +LP IWKPE LWTGKQVITAVLNHITRG
Sbjct: 678 YSSGVSNAVLDSFSGKPGKKVFISSSEEETLSVLPAIWKPETLWTGKQVITAVLNHITRG 737
Query: 1117 RLPFTVERAGKLPQDFFKTRFNAD-XXXXXXXXXXKLSKTNKMHKDKPGKEKEDVDGKPS 941
PFTVE+ GKLP DFF+ R NAD K SK+ + + DKP K K +
Sbjct: 738 HPPFTVEKGGKLPHDFFRGRSNADRTKNAEQNNTGKFSKSKETNGDKPSKVKAGANNSRE 797
Query: 940 GGKEDDKNKSKQKELNEEKLLIYKNDLVQGVIDKAQFADYGLVHTVQEIYGSNTAGTLLS 761
K + ++K+++K +EEKLLIY+NDLV+GVIDKAQFA+YGLVHTVQE+YGSNTAG LLS
Sbjct: 798 -EKRNSEDKAERKGPDEEKLLIYENDLVRGVIDKAQFAEYGLVHTVQELYGSNTAGNLLS 856
Query: 760 ALSRLFTVFLQMHGFTCGVXXXXXXXXXXKERKNHLEGSEEIGKKVHLDALELEDGAEMD 581
A SRLFTVFLQMH FTCGV RK LE E GK H + L LE G +D
Sbjct: 857 AFSRLFTVFLQMHAFTCGVDDLLLLKVKDDARKKQLEDCEASGKDAHREFLNLEKGTNID 916
Query: 580 PIKLKSEIEKAIRGGGDAAVAYFDMKMTSELNKHTSSSVINDLLSEGLLKPTGKNWISLM 401
P + K IE+AIR GG++A+ D KMTS LN TSS VI++LLS+GLLK TGKN ISLM
Sbjct: 917 PTEQKLLIEEAIRSGGESALTSLDRKMTSILNAGTSSGVISELLSQGLLKSTGKNCISLM 976
Query: 400 TTSGAKGSKVNFQQISAHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLT 221
TTSGAKGSKVNFQQIS+HLGQQELEGKRVPRM+SGKTLP FHPWDWA RAGGFI DRFLT
Sbjct: 977 TTSGAKGSKVNFQQISSHLGQQELEGKRVPRMISGKTLPCFHPWDWASRAGGFITDRFLT 1036
Query: 220 GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKISYDYSVRDADGSIVQF 41
GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LK++YD++VRD+DGSIVQF
Sbjct: 1037 GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLEGLKVNYDHTVRDSDGSIVQF 1096
Query: 40 RYGEDGVDVHQT 5
YGEDG+DVHQT
Sbjct: 1097 CYGEDGIDVHQT 1108
>OAY40529.1 hypothetical protein MANES_09G029200 [Manihot esculenta]
Length = 1707
Score = 1275 bits (3298), Expect = 0.0
Identities = 659/1031 (63%), Positives = 781/1031 (75%), Gaps = 10/1031 (0%)
Frame = -1
Query: 3064 VVPVYNPLLFNLLYVILKRTCFFCHHFRASRSEVEKCVRKLELIIKGDIVAAKSLDSELP 2885
+ PVYNPLLF L+ +L+RTCFFC+HFR R +VEKCV++LELI+KGDIV AK LDS
Sbjct: 83 ISPVYNPLLFGFLHKLLQRTCFFCYHFRVQRGQVEKCVKQLELIVKGDIVGAKRLDSVSL 142
Query: 2884 SESSNPEDSDVSNKSSCSMINPRGKYYNVKNLKPQEWTSXXXXXXXXXXXXXXKIETSKC 2705
+E+ PE++D S++S CS I+ +++NV+++K Q WTS K + KC
Sbjct: 143 NEALYPEETDGSSES-CSTIHSGAQHHNVEHMKQQGWTSLQLSEAMSVFNSFLKPKFKKC 201
Query: 2704 GNCKAKNPSISKPTFGWIHMSGMPHADIRANLIRGCNLGESFSGGAAATDLGDASDVDTP 2525
NC+ NP+I+KPTFGW H SGM A IRAN+IR LG +G + DV+ P
Sbjct: 202 KNCERANPNITKPTFGWFHTSGMSDASIRANVIRAKKLGGPLNGESEGV-----MDVEDP 256
Query: 2524 ETYALNGASLGTRDTTTRSQKGSGGVRS-NFKKQKDLFSGPLLPSDVKDIIEKLWENEFE 2348
N +DT+ + K GG F KQK +FS LLP++VKD++E LWENE
Sbjct: 257 AAPPEN------QDTSRKRHKQKGGQEVLEFIKQKSVFSRQLLPTEVKDVLELLWENEAR 310
Query: 2347 LCSFISDIQQQGFGRKP-GDSIFFLGAIVVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQC 2171
LCSFI+D+QQQGF +K G S+FFL I+VPPIKFR P+KGGDSVMEHPQTVLLSK+LQ
Sbjct: 311 LCSFITDLQQQGFEKKKAGPSMFFLETILVPPIKFRPPTKGGDSVMEHPQTVLLSKILQS 370
Query: 2170 NIYLANAYVNQSEKITVARWMDLQQSVNVFFDSKNA--AGQKDMASGICQLLEKKEGLFR 1997
NI L +A++N+ V RWM+LQQS+N+ FDSK A GQ+D+ASGICQLLEKKEGLFR
Sbjct: 371 NISLGDAHINKEHSKVVRRWMELQQSINMLFDSKTAKGTGQRDVASGICQLLEKKEGLFR 430
Query: 1996 QKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVMKLRDSIINGPE 1817
QK+MGKRVNYACRSVISPDPYL VNEIGIPP FA++LTYPERVTPWN+ KLR+++ING E
Sbjct: 431 QKMMGKRVNYACRSVISPDPYLGVNEIGIPPCFAVKLTYPERVTPWNIAKLRNAVINGSE 490
Query: 1816 IHPGATNYLDKLSTMRLPLNKKMRISISRKLPSSRGAIMQPGKDSDYEFEGKTVYRHLQD 1637
HPGAT+Y+DKLS +LP +K RISISRKLPSSRGA+ +PGK SD +EGK VYRHLQD
Sbjct: 491 SHPGATHYVDKLSINKLPPARKARISISRKLPSSRGAVTEPGKSSDCGYEGKIVYRHLQD 550
Query: 1636 GDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEIS 1457
GDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDE+S
Sbjct: 551 GDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVS 610
Query: 1456 RAEAYNIVNANDQYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFYQXXXXXXXXX 1277
RAEAYNIVNAN+QYVRPSNG+PLR+LIQDHI+S+ LLTKKDTFL +DEF Q
Sbjct: 611 RAEAYNIVNANNQYVRPSNGEPLRALIQDHIISSVLLTKKDTFLRQDEFTQLLYSTGVST 670
Query: 1276 XXXXSFTGKPGQRVLISSSEQEVLPLLPTIWKPEPLWTGKQVITAVLNHITRGRLPFTVE 1097
+F G+PGQ+VL S SE E+ + P IWKPEPLWTGKQVITAVLNHIT+G PFTVE
Sbjct: 671 SAPTTFHGRPGQKVLWSQSEDEIDTIQPAIWKPEPLWTGKQVITAVLNHITKGHPPFTVE 730
Query: 1096 RAGKLPQDFFKTRFNADXXXXXXXXXXKLSKTNKMHKDKPGKEKEDVD-GKPSGGKEDDK 920
+ K+P +FFK+R N KP KEK+ GK SG +D K
Sbjct: 731 KDAKIPYNFFKSRAN---------------------DYKPCKEKKSGGRGKKSGEDKDHK 769
Query: 919 NKS---KQKELNEEKLLIYKNDLVQGVIDKAQFADYGLVHTVQEIYGSNTAGTLLSALSR 749
+ ++KEL EEKL IY+N+LV+GVIDKAQF +YGLVHTV E++GSNTAG LLS LSR
Sbjct: 770 SVGDTLEKKELGEEKLFIYRNELVRGVIDKAQFGEYGLVHTVHELFGSNTAGILLSVLSR 829
Query: 748 LFTVFLQMHGFTCGVXXXXXXXXXXKERKNHLEGSEEIGKKVHLDALELED-GAEMDPIK 572
LFT +LQMHGFTCGV ERK LE E+ G+ VH + + +ED +DP++
Sbjct: 830 LFTAYLQMHGFTCGVDDLLILKAQDNERKKQLESCEKSGELVHRNFIGIEDENLNIDPVE 889
Query: 571 LKSEIEKAIRG-GGDAAVAYFDMKMTSELNKHTSSSVINDLLSEGLLKPTGKNWISLMTT 395
L+ +IE IR D+ ++Y D M++ELN TSS VI+ LLS+GL+KP+ KN ISLMTT
Sbjct: 890 LQLKIENTIRSRDEDSGLSYLDRLMSNELNTKTSSGVIDKLLSDGLVKPSVKNCISLMTT 949
Query: 394 SGAKGSKVNFQQISAHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGL 215
SGAKGSKVNFQQIS+ LGQQELEGKRVPRMVSGKTLP F PWDWA RAGG+IIDRFLTGL
Sbjct: 950 SGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFPPWDWAARAGGYIIDRFLTGL 1009
Query: 214 RPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKISYDYSVRDADGSIVQFRY 35
RPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKI YD++VRDADGS++QF Y
Sbjct: 1010 RPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKIGYDHTVRDADGSVIQFFY 1069
Query: 34 GEDGVDVHQTG 2
GEDGVDVHQTG
Sbjct: 1070 GEDGVDVHQTG 1080
>OMO63119.1 RNA polymerase, alpha subunit [Corchorus capsularis]
Length = 2056
Score = 1261 bits (3264), Expect = 0.0
Identities = 651/1028 (63%), Positives = 767/1028 (74%), Gaps = 9/1028 (0%)
Frame = -1
Query: 3064 VVPVYNPLLFNLLYVILKRTCFFCHHFRASRSEVEKCVRKLELIIKGDIVAAKSLDSELP 2885
V P+YNPLLFN L ++L+RTCFFC+HFRA R+EVE+CV KL+LI KGDIV AK LDS+
Sbjct: 458 VSPIYNPLLFNFLNMLLQRTCFFCYHFRAERTEVERCVSKLKLIGKGDIVGAKMLDSDST 517
Query: 2884 SESSNPEDSDVSNKSSCSMINPRGKYYNVKNLKPQEWTSXXXXXXXXXXXXXXKIETSKC 2705
SS PE + S + ++ ++ + + P+EWTS K + KC
Sbjct: 518 DASSYPEYGEGSQELGSTV-------HDSETINPKEWTSLQLREAISVLNNFLKQKYKKC 570
Query: 2704 GNCKAKNPSISKPTFGWIHMSGMPHADIRANLIRGCNLGESFSGGAAATDLGDASD---- 2537
NC AKNP+I KP FGW++ GM A +R N+IRGC + ++FSG A + L DA+D
Sbjct: 571 KNCDAKNPTIEKPIFGWLYTRGMSGAQMRENVIRGCTMVDTFSG-EAGSGLEDANDAVVS 629
Query: 2536 ---VDTPETYALNGASLGTRDTTTRSQKGSGGVRSNFKKQKDLFSGPLLPSDVKDIIEKL 2366
VDT E S + +++K + F KQK+LFSGPLLPS+VK I + L
Sbjct: 630 SGSVDTDEMDTTETGSAAAEHSGPKARKKKAQIPLEFMKQKNLFSGPLLPSEVKKITKLL 689
Query: 2365 WENEFELCSFISDIQQQGFGRKPGDSIFFLGAIVVPPIKFRLPSKGGDSVMEHPQTVLLS 2186
WENE ELCS I+DIQQQGFGRK G S+ FL I+VPPIKFR P+KGGDSVMEHPQTVLL+
Sbjct: 690 WENEVELCSLITDIQQQGFGRKEGYSMLFLETILVPPIKFRAPTKGGDSVMEHPQTVLLN 749
Query: 2185 KVLQCNIYLANAYVNQ--SEKITVARWMDLQQSVNVFFDSKNAAGQKDMASGICQLLEKK 2012
KVLQ NI L NAY N+ S K+ V WMDLQQSVN+ FD+KNA G++D +SGICQLLEKK
Sbjct: 750 KVLQANISLGNAYTNELKSSKVVVRLWMDLQQSVNLLFDNKNATGRRDQSSGICQLLEKK 809
Query: 2011 EGLFRQKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVMKLRDSI 1832
EG+FRQK+MGKRVN+ACRSVISPDPYLAVNEIGIPP FAL LTYPERVTPWN KLR++I
Sbjct: 810 EGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPNFALTLTYPERVTPWNTAKLREAI 869
Query: 1831 INGPEIHPGATNYLDKLSTMRLPLNKKMRISISRKLPSSRGAIMQPGKDSDYEFEGKTVY 1652
+NGP+IHPGAT+Y+DKLST +LP ++K RI+ +RKLPSSRGAI QPG + DYEFEGKTV
Sbjct: 870 VNGPQIHPGATHYIDKLSTQKLPPDRKARITFARKLPSSRGAITQPGNNFDYEFEGKTVL 929
Query: 1651 RHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFP 1472
RHL+DGDVVLVNRQPTLHKPSIMAH+VRVL EKT+RMHYANCSTYNADFDGDE+NVHFP
Sbjct: 930 RHLRDGDVVLVNRQPTLHKPSIMAHIVRVLPKEKTIRMHYANCSTYNADFDGDEINVHFP 989
Query: 1471 QDEISRAEAYNIVNANDQYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFYQXXXX 1292
QDEISRAEAYNIVNAN+QYVRPSNG+PLR+LIQD+IVS+ LLTK+DTFL+ DEF Q
Sbjct: 990 QDEISRAEAYNIVNANNQYVRPSNGEPLRALIQDNIVSSVLLTKRDTFLSTDEFNQLLYS 1049
Query: 1291 XXXXXXXXXSFTGKPGQRVLISSSEQEVLPLLPTIWKPEPLWTGKQVITAVLNHITRGRL 1112
SF+ KPGQ+V ISSSE+ +L P I KP PLWTGKQVITAVLNHITR
Sbjct: 1050 SGVSSLSQCSFSSKPGQKVSISSSEEGMLSTHPAILKPVPLWTGKQVITAVLNHITRNCP 1109
Query: 1111 PFTVERAGKLPQDFFKTRFNADXXXXXXXXXXKLSKTNKMHKDKPGKEKEDVDGKPSGGK 932
PFT+E+ GK+P DFF+ R S NK K K K+K + K
Sbjct: 1110 PFTMEKTGKIPHDFFRNR----------------STENKPKKTKNSKKKAPDEEK----- 1148
Query: 931 EDDKNKSKQKELNEEKLLIYKNDLVQGVIDKAQFADYGLVHTVQEIYGSNTAGTLLSALS 752
++E +EEK+LI+KND ++GVIDKAQFADYGLVHTVQE+YGSN AG LLS S
Sbjct: 1149 -------MEREPDEEKILIHKNDFLRGVIDKAQFADYGLVHTVQELYGSNAAGILLSVFS 1201
Query: 751 RLFTVFLQMHGFTCGVXXXXXXXXXXKERKNHLEGSEEIGKKVHLDALELEDGAEMDPIK 572
RLFTVFLQMHGFTCGV ERK LE E+ + H + +E E P +
Sbjct: 1202 RLFTVFLQMHGFTCGVDDLLIMKGKDIERKKQLEDCEKKVTEAHYELFGVEVDTEKAPTE 1261
Query: 571 LKSEIEKAIRGGGDAAVAYFDMKMTSELNKHTSSSVINDLLSEGLLKPTGKNWISLMTTS 392
L+ +IE+ IR G+ A+ D KM S LN+++S V+ LLSEGL+K GKN I++MTTS
Sbjct: 1262 LQLKIERNIRRDGENALTALDRKMISVLNENSSRGVLAGLLSEGLVKSMGKNCIAIMTTS 1321
Query: 391 GAKGSKVNFQQISAHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLR 212
GAKGSKVNFQQIS++LGQQELEGKRVPRMVSGKTLP FHPWDWA RAGGFI DRFL+GLR
Sbjct: 1322 GAKGSKVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDRFLSGLR 1381
Query: 211 PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKISYDYSVRDADGSIVQFRYG 32
PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKISYD++VRDADGSIVQF YG
Sbjct: 1382 PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSIVQFNYG 1441
Query: 31 EDGVDVHQ 8
EDG+DVHQ
Sbjct: 1442 EDGIDVHQ 1449
>CBI29879.3 unnamed protein product, partial [Vitis vinifera]
Length = 1669
Score = 1257 bits (3252), Expect = 0.0
Identities = 661/1027 (64%), Positives = 765/1027 (74%), Gaps = 7/1027 (0%)
Frame = -1
Query: 3064 VVPVYNPLLFNLLYVILKRTCFFCHHFRASRSEVEKCVRKLELIIKGDIVAAKSLDSELP 2885
V VYNPLLFNLL+ +L++TCFFCHHF+ S S V+K V +LELI KGD+V AK+LDS P
Sbjct: 84 VSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKYVSQLELISKGDVVGAKNLDSISP 143
Query: 2884 SESSNPEDSDVSNKSSCSMINPRGKYYNVKNLKPQEWTSXXXXXXXXXXXXXXKIETSKC 2705
SESS PEDSD S+ S S +N + +LK QEWTS K++ C
Sbjct: 144 SESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEWTSLQCIEAMSVMDNFLKLKHRDC 203
Query: 2704 GNCKAKNPSISKPTFGWIHMSGMPHADIRANLIRGCNLGESFSGGAAATDLGDASDVDTP 2525
NCKAK+P ++KPTFGW HM+G+ A RAN+IRG L +G VDT
Sbjct: 204 KNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLERPLNG------------VDTD 251
Query: 2524 ETYALNGASLGTRDTTTRSQKGSGGVRS-NFKKQKDLFSGPLLPSDVKDIIEKLWENEFE 2348
ET++ + G +DT T+ + G F KQK FSGPLLPS+V+DI+E+LWENE E
Sbjct: 252 ETHSSIAPTDGIQDTVTKRLERKGAQAPIEFIKQKSFFSGPLLPSEVRDIMERLWENEAE 311
Query: 2347 LCSFISDIQQQGFG---RKPGDSIFFLGAIVVPPIKFRLPSKGGDSVMEHPQTVLLSKVL 2177
LCSFISDI Q+ G K G S+FFL I+VPPIKFR PSKG SVMEHPQTVLL KVL
Sbjct: 312 LCSFISDILQERLGASGNKAGYSMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVL 371
Query: 2176 QCNIYLANAYVNQSEKITV-ARWMDLQQSVNVFFDSKNAAGQ--KDMASGICQLLEKKEG 2006
Q NI L NA+ N SE+ + +RWMDLQQS+NV FD K AAGQ +D SGICQLLEKKEG
Sbjct: 372 QANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEG 431
Query: 2005 LFRQKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVMKLRDSIIN 1826
+FRQK+MGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRLTYPE+VTPWNV+KLRD+IIN
Sbjct: 432 VFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIIN 491
Query: 1825 GPEIHPGATNYLDKLSTMRLPLNKKMRISISRKLPSSRGAIMQPGKDSDYEFEGKTVYRH 1646
GPEIHPGAT+Y+DKLST++L +NKKMRISISRKLPSSRG + QPG+ SD EFEGK VYRH
Sbjct: 492 GPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRH 551
Query: 1645 LQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQD 1466
LQDGD+VLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQD
Sbjct: 552 LQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQD 611
Query: 1465 EISRAEAYNIVNANDQYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFYQXXXXXX 1286
EISRAEAYNIVNAN+QY+ PS GDP+R LIQDHIVSA LLTKKDTFL R++ Y
Sbjct: 612 EISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIVSAVLLTKKDTFLTREQ-YNQLLYSS 670
Query: 1285 XXXXXXXSFTGKPGQRVLISSSEQEVLPLLPTIWKPEPLWTGKQVITAVLNHITRGRLPF 1106
SF GKPG++V + SE E+ PLLP IWKPEPLW+GKQVITAVLNHITRGR PF
Sbjct: 671 GLSSGSGSFIGKPGKKVSVLDSEDEMQPLLPAIWKPEPLWSGKQVITAVLNHITRGRKPF 730
Query: 1105 TVERAGKLPQDFFKTRFNADXXXXXXXXXXKLSKTNKMHKDKPGKEKEDVDGKPSGGKED 926
T E+ GK+P+++F +++ + K GK K+ G +
Sbjct: 731 TTEKDGKIPREYF---------------------GSEIDEKKSGKGKDP-------GSDR 762
Query: 925 DKNKSKQKELNEEKLLIYKNDLVQGVIDKAQFADYGLVHTVQEIYGSNTAGTLLSALSRL 746
K K +K+ E KLLI+KN+LV+GVIDKAQF YGLVH VQE+YGSNTAG LLS LSRL
Sbjct: 763 RKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLSRL 822
Query: 745 FTVFLQMHGFTCGVXXXXXXXXXXKERKNHLEGSEEIGKKVHLDALELEDGAEMDPIKLK 566
FTVFLQMHGFTCGV RK L+ SE IG+ VH + G ++DP+KL+
Sbjct: 823 FTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHG-KIDPVKLQ 881
Query: 565 SEIEKAIRGGGDAAVAYFDMKMTSELNKHTSSSVINDLLSEGLLKPTGKNWISLMTTSGA 386
E+EK I G+AA+ D M +ELN+ T S V DLL +GL+KP KN +SLMTT+GA
Sbjct: 882 VEVEKIILSNGEAAITRLDRMMKNELNELT-SKVNKDLLLKGLVKPFPKNCLSLMTTTGA 940
Query: 385 KGSKVNFQQISAHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQ 206
KGS VNF QIS+ LGQQ+LEGKRVPRMVSGKTLP F PWD A RAGGFI DRFLTGL PQ
Sbjct: 941 KGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQ 1000
Query: 205 EYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKISYDYSVRDADGSIVQFRYGED 26
EYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LK+ YDY+VRD+DGSIVQF YG+D
Sbjct: 1001 EYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFNYGDD 1060
Query: 25 GVDVHQT 5
GVDVHQT
Sbjct: 1061 GVDVHQT 1067
>XP_010653802.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 [Vitis vinifera]
Length = 1691
Score = 1256 bits (3251), Expect = 0.0
Identities = 663/1037 (63%), Positives = 773/1037 (74%), Gaps = 17/1037 (1%)
Frame = -1
Query: 3064 VVPVYNPLLFNLLYVILKRTCFFCHHFRASRSEVEKCVRKLELIIKGDIVAAKSLDSELP 2885
V VYNPLLFNLL+ +L++TCFFCHHF+ S S V+K V +LELI KGD+V AK+LDS P
Sbjct: 84 VSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKYVSQLELISKGDVVGAKNLDSISP 143
Query: 2884 SESSNPEDSDVSNKSSCSMINPRGKYYNVKNLKPQEWTSXXXXXXXXXXXXXXKIETSKC 2705
SESS PEDSD S+ S S +N + +LK QEWTS K++ C
Sbjct: 144 SESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEWTSLQCIEAMSVMDNFLKLKHRDC 203
Query: 2704 GNCKAKNPSISKPTFGWIHMSGMPHADIRANLIRGCNLGESFSGGA---AATDLGDASD- 2537
NCKAK+P ++KPTFGW HM+G+ A RAN+IRG L S A +++++ + +D
Sbjct: 204 KNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLERPLSRVAEEKSSSEVENVNDM 263
Query: 2536 ------VDTPETYALNGASLGTRDTTTRSQKGSGGVRS-NFKKQKDLFSGPLLPSDVKDI 2378
VDT ET++ + G +DT T+ + G F KQK FSGPLLPS+V+DI
Sbjct: 264 FPWGDGVDTDETHSSIAPTDGIQDTVTKRLERKGAQAPIEFIKQKSFFSGPLLPSEVRDI 323
Query: 2377 IEKLWENEFELCSFISDIQQQGFG---RKPGDSIFFLGAIVVPPIKFRLPSKGGDSVMEH 2207
+E+LWENE ELCSFISDI Q+ G K G S+FFL I+VPPIKFR PSKG SVMEH
Sbjct: 324 MERLWENEAELCSFISDILQERLGASGNKAGYSMFFLETILVPPIKFRPPSKGQISVMEH 383
Query: 2206 PQTVLLSKVLQCNIYLANAYVNQSEKITV-ARWMDLQQSVNVFFDSKNAAGQ--KDMASG 2036
PQTVLL KVLQ NI L NA+ N SE+ + +RWMDLQQS+NV FD K AAGQ +D SG
Sbjct: 384 PQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAAGQGQRDTGSG 443
Query: 2035 ICQLLEKKEGLFRQKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWN 1856
ICQLLEKKEG+FRQK+MGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRLTYPE+VTPWN
Sbjct: 444 ICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPEKVTPWN 503
Query: 1855 VMKLRDSIINGPEIHPGATNYLDKLSTMRLPLNKKMRISISRKLPSSRGAIMQPGKDSDY 1676
V+KLRD+IINGPEIHPGAT+Y+DKLST++L +NKKMRISISRKLPSSRG + QPG+ SD
Sbjct: 504 VVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGVVAQPGRSSDN 563
Query: 1675 EFEGKTVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDG 1496
EFEGK VYRHLQDGD+VLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDG
Sbjct: 564 EFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDG 623
Query: 1495 DEMNVHFPQDEISRAEAYNIVNANDQYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRD 1316
DEMNVHFPQDEISRAEAYNIVNAN+QY+ PS GDP+R LIQDHIVSA LLTKKDTFL R+
Sbjct: 624 DEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIVSAVLLTKKDTFLTRE 683
Query: 1315 EFYQXXXXXXXXXXXXXSFTGKPGQRVLISSSEQEVLPLLPTIWKPEPLWTGKQVITAVL 1136
+ Y SF GKPG++V + SE E+ PLLP IWKPEPLW+GKQVITAVL
Sbjct: 684 Q-YNQLLYSSGLSSGSGSFIGKPGKKVSVLDSEDEMQPLLPAIWKPEPLWSGKQVITAVL 742
Query: 1135 NHITRGRLPFTVERAGKLPQDFFKTRFNADXXXXXXXXXXKLSKTNKMHKDKPGKEKEDV 956
NHITRGR PFT E+ GK+P+++F +++ + K GK K+
Sbjct: 743 NHITRGRKPFTTEKDGKIPREYF---------------------GSEIDEKKSGKGKDP- 780
Query: 955 DGKPSGGKEDDKNKSKQKELNEEKLLIYKNDLVQGVIDKAQFADYGLVHTVQEIYGSNTA 776
G + K K +K+ E KLLI+KN+LV+GVIDKAQF YGLVH VQE+YGSNTA
Sbjct: 781 ------GSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTA 834
Query: 775 GTLLSALSRLFTVFLQMHGFTCGVXXXXXXXXXXKERKNHLEGSEEIGKKVHLDALELED 596
G LLS LSRLFTVFLQMHGFTCGV RK L+ SE IG+ VH +
Sbjct: 835 GILLSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNH 894
Query: 595 GAEMDPIKLKSEIEKAIRGGGDAAVAYFDMKMTSELNKHTSSSVINDLLSEGLLKPTGKN 416
G ++DP+KL+ E+EK I G+AA+ D M +ELN+ T S V DLL +GL+KP KN
Sbjct: 895 G-KIDPVKLQVEVEKIILSNGEAAITRLDRMMKNELNELT-SKVNKDLLLKGLVKPFPKN 952
Query: 415 WISLMTTSGAKGSKVNFQQISAHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFII 236
+SLMTT+GAKGS VNF QIS+ LGQQ+LEGKRVPRMVSGKTLP F PWD A RAGGFI
Sbjct: 953 CLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFIS 1012
Query: 235 DRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKISYDYSVRDADG 56
DRFLTGL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LK+ YDY+VRD+DG
Sbjct: 1013 DRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDG 1072
Query: 55 SIVQFRYGEDGVDVHQT 5
SIVQF YG+DGVDVHQT
Sbjct: 1073 SIVQFNYGDDGVDVHQT 1089
>XP_015579396.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 isoform X1
[Ricinus communis]
Length = 1681
Score = 1252 bits (3239), Expect = 0.0
Identities = 645/1025 (62%), Positives = 768/1025 (74%), Gaps = 5/1025 (0%)
Frame = -1
Query: 3064 VVPVYNPLLFNLLYVILKRTCFFCHHFRASRSEVEKCVRKLELIIKGDIVAAKSLDSELP 2885
V PVYNPLLFN L+ +L+RTCF C HFR R +VEKC+++LELI+KGDIV AK L+S P
Sbjct: 83 VSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKCIKQLELIVKGDIVGAKRLESVSP 142
Query: 2884 SESSNPEDSDVSNKSSCSMINPRGKYYNVKNLKPQEWTSXXXXXXXXXXXXXXKIETSKC 2705
SE+ PE+SD+S++S C I+ + + ++ + Q WTS K + KC
Sbjct: 143 SEALYPEESDLSHES-CPTIHSGVQCNDGEHTRQQGWTSLQFTEAMSVLNNFLKPKFKKC 201
Query: 2704 GNCKAKNPSISKPTFGWIHMSGMPHADIRANLIRGCNLGESFSGGAAATDLGDASDVDTP 2525
NC++ NP+I+KPTFGW H SGM A IRAN+I G LG G +++ +DV+
Sbjct: 202 KNCESSNPNITKPTFGWFHTSGMSDASIRANVITGHQLG-----GLLGSEIEGTTDVE-- 254
Query: 2524 ETYALNGASLGTRDTTTRSQKGSGGVRS-NFKKQKDLFSGPLLPSDVKDIIEKLWENEFE 2348
+ A G + + T+ K F +QK FS LLPS+VK+ +E LW+NE
Sbjct: 255 -----DAAEPGDQHSGTKKHKKKERKEVLEFTRQKSTFSKQLLPSEVKEKLELLWKNEAR 309
Query: 2347 LCSFISDIQQQGFG-RKPGDSIFFLGAIVVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQC 2171
+CSFISD+QQQ FG RK G ++FFL I+VPPIKFR P+KGGDSVMEHPQTVLLSKVLQ
Sbjct: 310 ICSFISDLQQQEFGKRKAGPAMFFLETILVPPIKFRPPTKGGDSVMEHPQTVLLSKVLQS 369
Query: 2170 NIYLANAYVNQSEKITVARWMDLQQSVNVFFDSKNAAG--QKDMASGICQLLEKKEGLFR 1997
NI L +A++N+ V RW+DLQQS+N FDSK A G Q++ A GICQLLEKKEGLFR
Sbjct: 370 NISLGDAHINKEHSKIVRRWLDLQQSINTLFDSKTAKGPGQREGAPGICQLLEKKEGLFR 429
Query: 1996 QKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVMKLRDSIINGPE 1817
QK+MGKRVNYACRSVISPDPY+ VNEIGIPP FA++LTYPERVTPWN+ KLR+++ING E
Sbjct: 430 QKMMGKRVNYACRSVISPDPYIGVNEIGIPPCFAVKLTYPERVTPWNIAKLRNAVINGSE 489
Query: 1816 IHPGATNYLDKLSTMRLPLNKKMRISISRKLPSSRGAIMQPGKDSDYEFEGKTVYRHLQD 1637
HPGAT+Y+DKLS +LP +K RISISRKLPSSRGA+ Q GK S+ EFEGK VYRHLQD
Sbjct: 490 CHPGATHYVDKLSINKLPPARKARISISRKLPSSRGAVTQAGKGSECEFEGKIVYRHLQD 549
Query: 1636 GDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEIS 1457
GDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDE+S
Sbjct: 550 GDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVS 609
Query: 1456 RAEAYNIVNANDQYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFYQXXXXXXXXX 1277
RAEAYNIVNAN+Q+VRPSNG+PLR LIQDHIVSA LLTKKDTFL++DEF Q
Sbjct: 610 RAEAYNIVNANNQFVRPSNGEPLRGLIQDHIVSAVLLTKKDTFLSQDEFNQLLYSSGVST 669
Query: 1276 XXXXSFTGKPGQRVLISSSEQEVLPLLPTIWKPEPLWTGKQVITAVLNHITRGRLPFTVE 1097
SF G+PGQ+VL S SE E+ L P IWKP+PLWTGKQVITA+LNHIT PFTVE
Sbjct: 670 VGPNSFHGRPGQKVLWSRSEDEIQTLPPAIWKPKPLWTGKQVITAILNHITSDHPPFTVE 729
Query: 1096 RAGKLPQDFFKTRFNADXXXXXXXXXXKLSKTNKMHKDKPGKEKEDVDGKPSGGKEDDKN 917
+ K+P +FFK+R N D KP ++ DK+
Sbjct: 730 KDAKIPSNFFKSRANED--------------------------------KPCQEEKSDKD 757
Query: 916 KSKQKELNEEKLLIYKNDLVQGVIDKAQFADYGLVHTVQEIYGSNTAGTLLSALSRLFTV 737
+KE +EEK+L+YKN+LV+GVIDK QF +YGLVHTV E+ GS+TAG LLS LSRLFT
Sbjct: 758 APAEKEPDEEKMLVYKNELVRGVIDKGQFGEYGLVHTVHELLGSHTAGILLSVLSRLFTA 817
Query: 736 FLQMHGFTCGVXXXXXXXXXXKERKNHLEGSEEIGKKVHLDALELED-GAEMDPIKLKSE 560
+LQMHGFTCGV +ERK LE E+ G+ VH + + ++D ++DP+ ++
Sbjct: 818 YLQMHGFTCGVDDLLILTNKDEERKKQLEWCEKSGEAVHRNFIGIKDEKIKIDPVAMQLN 877
Query: 559 IEKAIRGGGDAAVAYFDMKMTSELNKHTSSSVINDLLSEGLLKPTGKNWISLMTTSGAKG 380
IEK IR GD+A+AY D +M++ELN TSS VI++LLS+GLLKP+GKN ISLMTTSGAKG
Sbjct: 878 IEKTIRSDGDSALAYLDRQMSNELNTKTSSGVISNLLSDGLLKPSGKNCISLMTTSGAKG 937
Query: 379 SKVNFQQISAHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQEY 200
SKVNFQQIS+ LGQQELEGKRVPRMVSGKTLP FHPWDWA R+GG+I DRFLTGLRPQEY
Sbjct: 938 SKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARSGGYITDRFLTGLRPQEY 997
Query: 199 YFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKISYDYSVRDADGSIVQFRYGEDGV 20
YFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKI YD++VRDADGS+VQF YGEDGV
Sbjct: 998 YFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKIGYDHTVRDADGSVVQFYYGEDGV 1057
Query: 19 DVHQT 5
DVHQT
Sbjct: 1058 DVHQT 1062
>EEF35648.1 DNA-directed RNA polymerase I largest subunit, putative [Ricinus
communis]
Length = 1686
Score = 1247 bits (3227), Expect = 0.0
Identities = 645/1026 (62%), Positives = 768/1026 (74%), Gaps = 6/1026 (0%)
Frame = -1
Query: 3064 VVPVYNPLLFNLLYVILKRTCFFCHHFRASRSEVEKCVRKLELIIKGDIVAAKSLDSELP 2885
V PVYNPLLFN L+ +L+RTCF C HFR R +VEKC+++LELI+KGDIV AK L+S P
Sbjct: 87 VSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKCIKQLELIVKGDIVGAKRLESVSP 146
Query: 2884 SESSNPEDSDVSNKSSCSMINPRGKYYNVKNLKPQEWTSXXXXXXXXXXXXXXKIETSKC 2705
SE+ PE+SD+S++S C I+ + + ++ + Q WTS K + KC
Sbjct: 147 SEALYPEESDLSHES-CPTIHSGVQCNDGEHTRQQGWTSLQFTEAMSVLNNFLKPKFKKC 205
Query: 2704 GNCKAKNPSISKPTFGWIHMSGMPHADIRANLIRGCNLGESFSGGAAATDLGDASDVDTP 2525
NC++ NP+I+KPTFGW H SGM A IRAN+I G LG G +++ +DV+
Sbjct: 206 KNCESSNPNITKPTFGWFHTSGMSDASIRANVITGHQLG-----GLLGSEIEGTTDVE-- 258
Query: 2524 ETYALNGASLGTRDTTTRSQKGSGGVRS-NFKKQKDLFSGPLLPSDVKDIIEKLWENEFE 2348
+ A G + + T+ K F +QK FS LLPS+VK+ +E LW+NE
Sbjct: 259 -----DAAEPGDQHSGTKKHKKKERKEVLEFTRQKSTFSKQLLPSEVKEKLELLWKNEAR 313
Query: 2347 LCSFISDIQQQGFG-RKPGDSIFFLGAIVVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQC 2171
+CSFISD+QQQ FG RK G ++FFL I+VPPIKFR P+KGGDSVMEHPQTVLLSKVLQ
Sbjct: 314 ICSFISDLQQQEFGKRKAGPAMFFLETILVPPIKFRPPTKGGDSVMEHPQTVLLSKVLQS 373
Query: 2170 NIYLANAYVNQSEKITVARWMDLQQSVNVFFDSKNAAG--QKDMASGICQLLEKKEGLFR 1997
NI L +A++N+ V RW+DLQQS+N FDSK A G Q++ A GICQLLEKKEGLFR
Sbjct: 374 NISLGDAHINKEHSKIVRRWLDLQQSINTLFDSKTAKGPGQREGAPGICQLLEKKEGLFR 433
Query: 1996 QKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVMKLRDSIINGPE 1817
QK+MGKRVNYACRSVISPDPY+ VNEIGIPP FA++LTYPERVTPWN+ KLR+++ING E
Sbjct: 434 QKMMGKRVNYACRSVISPDPYIGVNEIGIPPCFAVKLTYPERVTPWNIAKLRNAVINGSE 493
Query: 1816 IHPGATNYLDKLSTMRLPLNKKMRISISRKLPSSRGAIMQPGKDSDYEFEGKTVYRHLQD 1637
HPGAT+Y+DKLS +LP +K RISISRKLPSSRGA+ Q GK S+ EFEGK VYRHLQD
Sbjct: 494 CHPGATHYVDKLSINKLPPARKARISISRKLPSSRGAVTQAGKGSECEFEGKIVYRHLQD 553
Query: 1636 GDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCS-TYNADFDGDEMNVHFPQDEI 1460
GDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCS TYNADFDGDEMNVHFPQDE+
Sbjct: 554 GDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSITYNADFDGDEMNVHFPQDEV 613
Query: 1459 SRAEAYNIVNANDQYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFYQXXXXXXXX 1280
SRAEAYNIVNAN+Q+VRPSNG+PLR LIQDHIVSA LLTKKDTFL++DEF Q
Sbjct: 614 SRAEAYNIVNANNQFVRPSNGEPLRGLIQDHIVSAVLLTKKDTFLSQDEFNQLLYSSGVS 673
Query: 1279 XXXXXSFTGKPGQRVLISSSEQEVLPLLPTIWKPEPLWTGKQVITAVLNHITRGRLPFTV 1100
SF G+PGQ+VL S SE E+ L P IWKP+PLWTGKQVITA+LNHIT PFTV
Sbjct: 674 TVGPNSFHGRPGQKVLWSRSEDEIQTLPPAIWKPKPLWTGKQVITAILNHITSDHPPFTV 733
Query: 1099 ERAGKLPQDFFKTRFNADXXXXXXXXXXKLSKTNKMHKDKPGKEKEDVDGKPSGGKEDDK 920
E+ K+P +FFK+R N D KP ++ DK
Sbjct: 734 EKDAKIPSNFFKSRANED--------------------------------KPCQEEKSDK 761
Query: 919 NKSKQKELNEEKLLIYKNDLVQGVIDKAQFADYGLVHTVQEIYGSNTAGTLLSALSRLFT 740
+ +KE +EEK+L+YKN+LV+GVIDK QF +YGLVHTV E+ GS+TAG LLS LSRLFT
Sbjct: 762 DAPAEKEPDEEKMLVYKNELVRGVIDKGQFGEYGLVHTVHELLGSHTAGILLSVLSRLFT 821
Query: 739 VFLQMHGFTCGVXXXXXXXXXXKERKNHLEGSEEIGKKVHLDALELEDGA-EMDPIKLKS 563
+LQMHGFTCGV +ERK LE E+ G+ VH + + ++D ++DP+ ++
Sbjct: 822 AYLQMHGFTCGVDDLLILTNKDEERKKQLEWCEKSGEAVHRNFIGIKDEKIKIDPVAMQL 881
Query: 562 EIEKAIRGGGDAAVAYFDMKMTSELNKHTSSSVINDLLSEGLLKPTGKNWISLMTTSGAK 383
IEK IR GD+A+AY D +M++ELN TSS VI++LLS+GLLKP+GKN ISLMTTSGAK
Sbjct: 882 NIEKTIRSDGDSALAYLDRQMSNELNTKTSSGVISNLLSDGLLKPSGKNCISLMTTSGAK 941
Query: 382 GSKVNFQQISAHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQE 203
GSKVNFQQIS+ LGQQELEGKRVPRMVSGKTLP FHPWDWA R+GG+I DRFLTGLRPQE
Sbjct: 942 GSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARSGGYITDRFLTGLRPQE 1001
Query: 202 YYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKISYDYSVRDADGSIVQFRYGEDG 23
YYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKI YD++VRDADGS+VQF YGEDG
Sbjct: 1002 YYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKIGYDHTVRDADGSVVQFYYGEDG 1061
Query: 22 VDVHQT 5
VDVHQT
Sbjct: 1062 VDVHQT 1067
>XP_011020318.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Populus
euphratica]
Length = 1699
Score = 1236 bits (3198), Expect = 0.0
Identities = 638/1023 (62%), Positives = 758/1023 (74%), Gaps = 2/1023 (0%)
Frame = -1
Query: 3064 VVPVYNPLLFNLLYVILKRTCFFCHHFRASRSEVEKCVRKLELIIKGDIVAAKSLDSELP 2885
+ PVYNPLLFN L+ +L+RTCFFC HFRA ++VEK V +LELIIKGD+V AK LDS P
Sbjct: 82 ISPVYNPLLFNFLHKLLQRTCFFCFHFRADSNQVEKFVSQLELIIKGDVVGAKRLDSFSP 141
Query: 2884 SESSNPEDSDVSNKSSCSMINPRGKYYNVKNLKPQEWTSXXXXXXXXXXXXXXKIETSKC 2705
E+S PEDSD S++S CS I+ + N + K EWTS K+E+ KC
Sbjct: 142 IEASLPEDSDGSSES-CSTIHSGAPHPNNEQSKQSEWTSLQLSEAMSILNNFLKLESKKC 200
Query: 2704 GNCKAKNPSISKPTFGWIHMSGMPHADIRANLIRGCNLGESFSGGAAATDLGDASDVDTP 2525
NC A NP+I KPTFGW H +G+ +A IR+NLI+ + F G A +L DA D
Sbjct: 201 KNCSASNPNIRKPTFGWFHWAGLSNAAIRSNLIKQQTIEGPFGG--AFEELIDAEDA--- 255
Query: 2524 ETYALNGASLGTRDTTTRSQKGSGGVRSNFKKQKDLFSGPLLPSDVKDIIEKLWENEFEL 2345
T + N T QK ++ F QKD S LLPS+ DI++ LW+NE L
Sbjct: 256 -TKSPNNKESATNRNLKEHQK----LQHQFTSQKDALSSQLLPSEAMDILKLLWKNEAGL 310
Query: 2344 CSFISDIQQQGFGRKP-GDSIFFLGAIVVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQCN 2168
CS +SDIQQQG G+K G S+FFL ++VPPIKFR P+KGGDSVMEHP +VLLSKVL+ N
Sbjct: 311 CSLMSDIQQQGVGKKKAGHSMFFLNTVLVPPIKFRPPTKGGDSVMEHPLSVLLSKVLELN 370
Query: 2167 IYLANAYVNQSEKITVARWMDLQQSVNVFFDSKNAAGQKDMASGICQLLEKKEGLFRQKL 1988
LA+A+ + + RW++LQQS+NV FDS A GQKD+ SGICQ+LEKKEG+FRQK+
Sbjct: 371 GSLADAHRSNDFPLIARRWLELQQSINVLFDSNTAKGQKDVISGICQILEKKEGMFRQKM 430
Query: 1987 MGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVMKLRDSIINGPEIHP 1808
MGKRVNYACRSVISPDPYL VNEIG+PP FA++LTYPERVTPWNV KLR+++INGPE HP
Sbjct: 431 MGKRVNYACRSVISPDPYLDVNEIGVPPCFAVKLTYPERVTPWNVAKLRNAVINGPESHP 490
Query: 1807 GATNYLDKLSTMRLPLNKKMRISISRKLPSSRGAIMQPGKDSDYEFEGKTVYRHLQDGDV 1628
GAT+Y+DKLST +LP N+KMR+S++RKL G+ DYE+EGK VYRHLQDGD+
Sbjct: 491 GATHYVDKLSTTKLPPNRKMRVSVARKLS---------GRSFDYEYEGKIVYRHLQDGDI 541
Query: 1627 VLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAE 1448
VLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDE+SRAE
Sbjct: 542 VLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRAE 601
Query: 1447 AYNIVNANDQYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFYQXXXXXXXXXXXX 1268
YNIVNAN+QYVRPSNG+P+RSLIQDHI+SA LLTKKDTFL DE YQ
Sbjct: 602 GYNIVNANNQYVRPSNGEPIRSLIQDHIISAVLLTKKDTFLTEDEVYQLLYSSGVSNARP 661
Query: 1267 XSFTGKPGQRVLISSSEQEVLPLLPTIWKPEPLWTGKQVITAVLNHITRGRLPFTVERAG 1088
SF+G+ G++V+ S E E+ L P I KP LW+GKQ+ITAVLNHITRG PFTVE+ G
Sbjct: 662 TSFSGRAGRKVIFLSYEDEIETLDPAIRKPIYLWSGKQLITAVLNHITRGHPPFTVEKGG 721
Query: 1087 KLPQDFFKTRFNADXXXXXXXXXXKLSKTNKMHKDKPGKEKEDVDGKPSGGKEDDKNKSK 908
KL DFFK++ S K+ KP KEKE P K
Sbjct: 722 KLSYDFFKSKIKNGKS----------SNGEKVGVSKPMKEKESGKVNP-----------K 760
Query: 907 QKELNEEKLLIYKNDLVQGVIDKAQFADYGLVHTVQEIYGSNTAGTLLSALSRLFTVFLQ 728
+K+L ++K++I++N LVQGVIDKAQF +YGLVHTVQE++G+ AGTLLS SRLFT +LQ
Sbjct: 761 EKQLEDDKMIIFRNVLVQGVIDKAQFGEYGLVHTVQELFGAKAAGTLLSVFSRLFTAYLQ 820
Query: 727 MHGFTCGVXXXXXXXXXXKERKNHLEGSEEIGKKVHLDALELED-GAEMDPIKLKSEIEK 551
MHGFTCGV ERK LE E+ G+++H + ++D ++DP++L+S IEK
Sbjct: 821 MHGFTCGVDDLLITKIKDDERKKQLENCEKCGEQIHRKFIGIKDENIKIDPLELQSNIEK 880
Query: 550 AIRGGGDAAVAYFDMKMTSELNKHTSSSVINDLLSEGLLKPTGKNWISLMTTSGAKGSKV 371
IR G++A+ Y D +MT+ELN TSS VIN+LLSEGLLKP+GKN ISLMTTSGAKGSKV
Sbjct: 881 TIRSDGESALTYLDRQMTNELNSKTSSGVINELLSEGLLKPSGKNCISLMTTSGAKGSKV 940
Query: 370 NFQQISAHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQEYYFH 191
NFQQIS+ LGQQELEGKRVPRMVSGKTLP FHPWDWA RAGG+IIDRFLTGLRPQEYYFH
Sbjct: 941 NFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGYIIDRFLTGLRPQEYYFH 1000
Query: 190 CMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKISYDYSVRDADGSIVQFRYGEDGVDVH 11
CMAGREGLVDTAVKTSRSGYLQRCLIKNLE L+I YD++VRDADGSIVQF YGEDGVDVH
Sbjct: 1001 CMAGREGLVDTAVKTSRSGYLQRCLIKNLECLRIGYDHTVRDADGSIVQFYYGEDGVDVH 1060
Query: 10 QTG 2
QTG
Sbjct: 1061 QTG 1063