BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00023745
         (374 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP77410.1 Retrovirus-related Pol polyprotein from transposon TN...    42   3e-07
KYP55818.1 Retrovirus-related Pol polyprotein from transposon TN...    42   1e-06

>KYP77410.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 672

 Score = 42.4 bits (98), Expect(2) = 3e-07
 Identities = 21/46 (45%), Positives = 32/46 (69%)
 Frame = +1

Query: 13  SFKDPQTSQTIGIGRKVGCLFELISLHLPHASHHLTIQYPPLNSHL 150
           S +DP+T + IG GRK+G +FEL +LH+P +S++L     P + HL
Sbjct: 248 SVQDPRTGKIIGNGRKIGRMFELTTLHVP-SSNNLCATSTPSSIHL 292



 Score = 39.3 bits (90), Expect(2) = 3e-07
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = +3

Query: 225 GTVFNTDFDCISC*LGKQTAXXXXXXXXXXXXPFDLVHSNI*GPSPTSTM 374
           G++     DC +C   KQ A            PFDLVHS++ G +PT TM
Sbjct: 315 GSIKEDKLDCTACQTTKQAALLFNDSISSSISPFDLVHSDVWGSAPTPTM 364


>KYP55818.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1103

 Score = 42.4 bits (98), Expect(2) = 1e-06
 Identities = 21/46 (45%), Positives = 32/46 (69%)
 Frame = +1

Query: 13  SFKDPQTSQTIGIGRKVGCLFELISLHLPHASHHLTIQYPPLNSHL 150
           S +DP+T + IG GRK+G +FEL +LH+P +S++L     P + HL
Sbjct: 242 SVQDPRTGKIIGNGRKIGRMFELTTLHVP-SSNNLCAASTPSSIHL 286



 Score = 37.0 bits (84), Expect(2) = 1e-06
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +3

Query: 225 GTVFNTDFDCISC*LGKQTAXXXXXXXXXXXXPFDLVHSNI*GPSPTSTM 374
           G++     DC +C   KQ A             FDLVH ++ GP+PT TM
Sbjct: 309 GSIKEDKLDCTACQTAKQAALPFNDSTSSSVSLFDLVHYDVWGPAPTPTM 358