BLASTX nr result
ID: Phellodendron21_contig00023093
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00023093
(4676 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006488216.1 PREDICTED: DNA-directed RNA polymerase III subuni... 2500 0.0
XP_006424701.1 hypothetical protein CICLE_v10027681mg [Citrus cl... 2434 0.0
KDO73040.1 hypothetical protein CISIN_1g000828mg [Citrus sinensi... 2298 0.0
EOY20721.1 DNA-directed RNA polymerase [Theobroma cacao] 2115 0.0
XP_017973127.1 PREDICTED: DNA-directed RNA polymerase III subuni... 2112 0.0
XP_017973128.1 PREDICTED: DNA-directed RNA polymerase III subuni... 2088 0.0
XP_012471450.1 PREDICTED: DNA-directed RNA polymerase III subuni... 2048 0.0
XP_017619485.1 PREDICTED: DNA-directed RNA polymerase III subuni... 2041 0.0
XP_016665225.1 PREDICTED: DNA-directed RNA polymerase III subuni... 2041 0.0
XP_012471451.1 PREDICTED: DNA-directed RNA polymerase III subuni... 2037 0.0
XP_016740618.1 PREDICTED: DNA-directed RNA polymerase III subuni... 2035 0.0
OMO67575.1 RNA polymerase, alpha subunit [Corchorus capsularis] 2029 0.0
OMO91373.1 RNA polymerase, alpha subunit [Corchorus olitorius] 2021 0.0
XP_018805188.1 PREDICTED: DNA-directed RNA polymerase III subuni... 2018 0.0
GAV71386.1 RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1... 1998 0.0
XP_002284657.1 PREDICTED: DNA-directed RNA polymerase III subuni... 1970 0.0
XP_015582490.1 PREDICTED: DNA-directed RNA polymerase III subuni... 1961 0.0
OAY24253.1 hypothetical protein MANES_17G000400 [Manihot esculenta] 1958 0.0
XP_011005565.1 PREDICTED: DNA-directed RNA polymerase III subuni... 1957 0.0
EEF30548.1 DNA-directed RNA polymerase III largest subunit, puta... 1949 0.0
>XP_006488216.1 PREDICTED: DNA-directed RNA polymerase III subunit 1 [Citrus
sinensis] XP_006488217.1 PREDICTED: DNA-directed RNA
polymerase III subunit 1 [Citrus sinensis]
Length = 1404
Score = 2500 bits (6479), Expect = 0.0
Identities = 1258/1368 (91%), Positives = 1295/1368 (94%)
Frame = -1
Query: 4676 EIMKAAEVQVFKGQYYSSNRVPIEGGLLDPRMGPANKSCTCATCHGGFSDCPGHYGYLTL 4497
EIMKAAEVQV+KGQYYSSNRVPIEGGLLDPRMGPANKSCTCATCHGGFS+CPGHYGYLTL
Sbjct: 40 EIMKAAEVQVYKGQYYSSNRVPIEGGLLDPRMGPANKSCTCATCHGGFSNCPGHYGYLTL 99
Query: 4496 ALPVYNIGYLSTILDVLKCICKSCSRLLLEEKLCKDYLKKMRNPKLEALRKNDLMKSIVK 4317
ALPVYN+GYLSTILD+LKCICK CSRLLLEEKLCKDYLKKMRNPK+EALRK DLMKSIVK
Sbjct: 100 ALPVYNVGYLSTILDILKCICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVK 159
Query: 4316 KCSTMASKAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTESLEEFASAIIHTKESKAAVN 4137
KCSTMASKAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTESL+EFASAI HTKESKAAVN
Sbjct: 160 KCSTMASKAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTESLQEFASAITHTKESKAAVN 219
Query: 4136 VATYILNPVKVLFLFKRITDEDCEVLYLSERPEKLIITSIAVPPIAIRPSVIMDSSQSNE 3957
VATYILNPV VLFLFKR+TD DCEVLYLSERPEKLIIT+IAVPPIAIRPSVIMD SQSNE
Sbjct: 220 VATYILNPVNVLFLFKRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDGSQSNE 279
Query: 3956 NDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQVAR 3777
NDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQVAR
Sbjct: 280 NDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQVAR 339
Query: 3776 PLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGIPIRMARILTYPERV 3597
PLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEV IPIRMARILTYPERV
Sbjct: 340 PLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERV 399
Query: 3596 SHHNIEKLRQCIRNGPDKYPGARMVRYPDGTARVLYGKFRIRLADELKFGCIVDRHLEDG 3417
S HNIEKLRQCI+NGPDKYPGARM+RYPDGTARVLYGKFR +LA ELK GCIVDRHLEDG
Sbjct: 400 SDHNIEKLRQCIQNGPDKYPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDG 459
Query: 3416 DVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEART 3237
DVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEART
Sbjct: 460 DVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEART 519
Query: 3236 EALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDP 3057
EALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMD
Sbjct: 520 EALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDR 579
Query: 3056 VDLPTPAILKPVELWTGKQLFSVLVRPHANMRVYVNLAVKEKTYSNKLIRTEGDEEIRIE 2877
VDLPTPAILKPVELWTGKQLFSVL+RPHANMRVYVNL VKEKTYSNKLIRTEGDEEIRIE
Sbjct: 580 VDLPTPAILKPVELWTGKQLFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIE 639
Query: 2876 TMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHAASGCMNRLAKLSAR 2697
TMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHA SGCMNRLAKLSAR
Sbjct: 640 TMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHATSGCMNRLAKLSAR 699
Query: 2696 WIGNHGFSIGIDDVQPKKELSDKKGKLISENYDVCNVKIKEYNEGKLQLKPGCDAAQTLE 2517
WIGNHGFSIGIDDVQPKKELSDKKGKLISENY+VCNVKIKEYNEGKLQLKPGCDAAQTLE
Sbjct: 700 WIGNHGFSIGIDDVQPKKELSDKKGKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLE 759
Query: 2516 SVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRA 2337
+VITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRA
Sbjct: 760 AVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRA 819
Query: 2336 PNGFIDRSLPHFPRKSKVPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTG 2157
PNGFIDRSLPHFPRK+K PAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTG
Sbjct: 820 PNGFIDRSLPHFPRKAKEPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTG 879
Query: 2156 YMSRRLIKALEDLSIQYDNTVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKV 1977
YMSRRLIKALEDLSIQYDN+VRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKV
Sbjct: 880 YMSRRLIKALEDLSIQYDNSVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKV 939
Query: 1976 KATCPVARHRYLSPQQISEMVEKQLAGYGMHLKESCSEAFLNSLGKFFQGRRDKLEKKIK 1797
KATCP A RYLSPQQ+SE+VEKQLA YG KESCSEAFLNSL KFF+G++DKL+KKIK
Sbjct: 940 KATCPPAGQRYLSPQQVSEIVEKQLAAYG---KESCSEAFLNSLRKFFEGQQDKLDKKIK 996
Query: 1796 FVEDFDGDEKSEILEKVAHKTSGITEKQLEVFMETCFSRYRLKXXXXXXXXXXXXXXXXG 1617
FVED D+KS+ILE+V HKTSGITEKQLEVF++TCFSRY +K G
Sbjct: 997 FVEDIGWDDKSQILEEVTHKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIG 1056
Query: 1616 EPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELEYNDNENAARVVK 1437
EPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELE NDNENAARVVK
Sbjct: 1057 EPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVK 1116
Query: 1436 SRIEKTVLGQVAKSIKVVMTSRLASIVITLDMETILDAHLGINADVVKESILQTPKIKLK 1257
RIEKT+LGQVAKSIK+VMTSRLASIVI LDMETI DAHL INAD+VKESI+QTPKIKLK
Sbjct: 1117 GRIEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINADIVKESIVQTPKIKLK 1176
Query: 1256 QQHIKVLDFRKLEIFPPVDKNKIHFELHSLKNVLPMVIVKGIKTXXXXXXXXXXXXXXXX 1077
QQHIKVLDFRKLEIFPPVDK+KIHFEL+SLKNVLPMVIVKGIKT
Sbjct: 1177 QQHIKVLDFRKLEIFPPVDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKRKV 1236
Query: 1076 XXXXXXXKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINET 897
KYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINET
Sbjct: 1237 KENGEKKKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINET 1296
Query: 896 MKAHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVN 717
MKAHGMSID RHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVN
Sbjct: 1297 MKAHGMSIDKRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVN 1356
Query: 716 GRDDRIEGVSECIIMGIPMPLGTGILKVRQRDAVPPMLRYGAPDPILS 573
GRDDRIEGVSECIIMGIPMPLGTGILK+RQRDAVPPML+YGAPDPI+S
Sbjct: 1357 GRDDRIEGVSECIIMGIPMPLGTGILKIRQRDAVPPMLKYGAPDPIMS 1404
>XP_006424701.1 hypothetical protein CICLE_v10027681mg [Citrus clementina] ESR37941.1
hypothetical protein CICLE_v10027681mg [Citrus
clementina]
Length = 1397
Score = 2434 bits (6308), Expect = 0.0
Identities = 1237/1383 (89%), Positives = 1274/1383 (92%), Gaps = 15/1383 (1%)
Frame = -1
Query: 4676 EIMKAAEVQVFKGQYYSSNRVPIEGGLLDPRM---------------GPANKSCTCATCH 4542
EIMKAAEVQV+KGQYYSSNRVPIEGGLLDPRM GPANKSCTCATCH
Sbjct: 40 EIMKAAEVQVYKGQYYSSNRVPIEGGLLDPRMEKIIFLQRLFFHGFQGPANKSCTCATCH 99
Query: 4541 GGFSDCPGHYGYLTLALPVYNIGYLSTILDVLKCICKSCSRLLLEEKLCKDYLKKMRNPK 4362
GGFS+CPGHYGYLTLALPVYN+GYLSTILD+LKCICK CSRLLLEEKLCKDYLKKMRNPK
Sbjct: 100 GGFSNCPGHYGYLTLALPVYNVGYLSTILDILKCICKYCSRLLLEEKLCKDYLKKMRNPK 159
Query: 4361 LEALRKNDLMKSIVKKCSTMASKAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTESLEEF 4182
+EALRK DLMKSIVKKCSTMASKAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTESL+EF
Sbjct: 160 MEALRKTDLMKSIVKKCSTMASKAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTESLQEF 219
Query: 4181 ASAIIHTKESKAAVNVATYILNPVKVLFLFKRITDEDCEVLYLSERPEKLIITSIAVPPI 4002
ASAI HTKESKAAVNVATYILNPV VLFLFKR+TD DCEVLYLSERPEKLIIT+IAVPPI
Sbjct: 220 ASAITHTKESKAAVNVATYILNPVNVLFLFKRMTDTDCEVLYLSERPEKLIITNIAVPPI 279
Query: 4001 AIRPSVIMDSSQSNENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYI 3822
AIRPSVIMD SQSNENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYI
Sbjct: 280 AIRPSVIMDGSQSNENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYI 339
Query: 3821 NSDVRGVPFSMQVARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVG 3642
NSDVRGVPFSMQVARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEV
Sbjct: 340 NSDVRGVPFSMQVARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVA 399
Query: 3641 IPIRMARILTYPERVSHHNIEKLRQCIRNGPDKYPGARMVRYPDGTARVLYGKFRIRLAD 3462
IPIRMARILTYPERVS HNIEKLRQCI+NGPDKYPGARM+RYPDGTARVLYGKFR +LA
Sbjct: 400 IPIRMARILTYPERVSDHNIEKLRQCIQNGPDKYPGARMIRYPDGTARVLYGKFRNQLAV 459
Query: 3461 ELKFGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDG 3282
ELK GCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDG
Sbjct: 460 ELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDG 519
Query: 3281 DEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRA 3102
DEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRA
Sbjct: 520 DEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRA 579
Query: 3101 AFSLMCCYMGDGMDPVDLPTPAILKPVELWTGKQLFSVLVRPHANMRVYVNLAVKEKTYS 2922
AFSLMCCYMGDGMD VDLPTPAILKPVELWTGKQLFSVL+RPHANMRVYVNL VKEKTYS
Sbjct: 580 AFSLMCCYMGDGMDRVDLPTPAILKPVELWTGKQLFSVLIRPHANMRVYVNLTVKEKTYS 639
Query: 2921 NKLIRTEGDEEIRIETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAH 2742
NKLIRTEGDEEIRIETMCPNDGFVYFRNSELISGQLGKATL
Sbjct: 640 NKLIRTEGDEEIRIETMCPNDGFVYFRNSELISGQLGKATL------------------- 680
Query: 2741 AASGCMNRLAKLSARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYDVCNVKIKEYNEG 2562
GCMNRLAKLSARWIGNHGFSIGIDDVQPKKELSDKKGKLISENY+VCNVKIKEYNEG
Sbjct: 681 ---GCMNRLAKLSARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYEVCNVKIKEYNEG 737
Query: 2561 KLQLKPGCDAAQTLESVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQ 2382
KLQLKPGCDAAQTLE+VITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQ
Sbjct: 738 KLQLKPGCDAAQTLEAVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQ 797
Query: 2381 MVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKVPAAKGFVANSFYSGLSATEFFFHTMGG 2202
MVACVGQQSVGGRRAPNGFIDRSLPHFPRK+K PAAKGFVANSFYSGLSATEFFFHTMGG
Sbjct: 798 MVACVGQQSVGGRRAPNGFIDRSLPHFPRKAKEPAAKGFVANSFYSGLSATEFFFHTMGG 857
Query: 2201 REGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRNAGGCIVQFLYGDDGMDPANMEG 2022
REGLVDTAVKTADTGYMSRRLIKALEDLSIQYDN+VRNAGGCIVQFLYGDDGMDPANMEG
Sbjct: 858 REGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNSVRNAGGCIVQFLYGDDGMDPANMEG 917
Query: 2021 KSGEPLNFDRLLMKVKATCPVARHRYLSPQQISEMVEKQLAGYGMHLKESCSEAFLNSLG 1842
KSGEPLNFDRLLMKVKATCP A RYLSPQQ+SE+VEKQLA YG KESCSEAFLNSL
Sbjct: 918 KSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVSEIVEKQLAAYG---KESCSEAFLNSLR 974
Query: 1841 KFFQGRRDKLEKKIKFVEDFDGDEKSEILEKVAHKTSGITEKQLEVFMETCFSRYRLKXX 1662
KFF+G++DKL+KKIKFVED D+KS+ILE+V HKTSGITEKQLEVF++TCFSRY +K
Sbjct: 975 KFFEGQQDKLDKKIKFVEDIGWDDKSQILEEVTHKTSGITEKQLEVFIQTCFSRYHVKRV 1034
Query: 1661 XXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITA 1482
GEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITA
Sbjct: 1035 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITA 1094
Query: 1481 ELEYNDNENAARVVKSRIEKTVLGQVAKSIKVVMTSRLASIVITLDMETILDAHLGINAD 1302
ELE NDNENAARVVK RIEKT+LGQVAKSIK+VMTSRLASIVI LDMETI DAHL INAD
Sbjct: 1095 ELECNDNENAARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINAD 1154
Query: 1301 VVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELHSLKNVLPMVIVKGIKTX 1122
+VKESI+QTPKIKLKQQHIKVLDFRKLEIFPPVDK+KIHFEL+SLKNVLPMVIVKGIKT
Sbjct: 1155 IVKESIVQTPKIKLKQQHIKVLDFRKLEIFPPVDKSKIHFELYSLKNVLPMVIVKGIKTV 1214
Query: 1121 XXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLG 942
KYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLG
Sbjct: 1215 ERVVIAEKEKEKRKVKENGEKKKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLG 1274
Query: 941 IEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLA 762
IEAARICIIDEINETMKAHGMSID RHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLA
Sbjct: 1275 IEAARICIIDEINETMKAHGMSIDKRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLA 1334
Query: 761 SFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKVRQRDAVPPMLRYGAPDP 582
SFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILK+RQRDAVPPML+YGAPDP
Sbjct: 1335 SFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKIRQRDAVPPMLKYGAPDP 1394
Query: 581 ILS 573
I+S
Sbjct: 1395 IMS 1397
>KDO73040.1 hypothetical protein CISIN_1g000828mg [Citrus sinensis] KDO73041.1
hypothetical protein CISIN_1g000828mg [Citrus sinensis]
Length = 1265
Score = 2298 bits (5955), Expect = 0.0
Identities = 1164/1268 (91%), Positives = 1197/1268 (94%)
Frame = -1
Query: 4376 MRNPKLEALRKNDLMKSIVKKCSTMASKAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTE 4197
MRNPK+EALRK DLMKSIVKKCSTMASKAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTE
Sbjct: 1 MRNPKMEALRKTDLMKSIVKKCSTMASKAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTE 60
Query: 4196 SLEEFASAIIHTKESKAAVNVATYILNPVKVLFLFKRITDEDCEVLYLSERPEKLIITSI 4017
SL+EFASAI HTKESKAAVNVATYILNPV VLFLFKR+TD DCEVLYLSERPEKLIIT+I
Sbjct: 61 SLQEFASAITHTKESKAAVNVATYILNPVNVLFLFKRMTDTDCEVLYLSERPEKLIITNI 120
Query: 4016 AVPPIAIRPSVIMDSSQSNENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVE 3837
AVPPIAIRPSVIMD SQSNENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVE
Sbjct: 121 AVPPIAIRPSVIMDGSQSNENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVE 180
Query: 3836 VAQYINSDVRGVPFSMQVARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLK 3657
VAQYINSDVRGVPFSMQVARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLK
Sbjct: 181 VAQYINSDVRGVPFSMQVARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLK 240
Query: 3656 ITEVGIPIRMARILTYPERVSHHNIEKLRQCIRNGPDKYPGARMVRYPDGTARVLYGKFR 3477
ITEV IPIRMARILTYPERVS HNIEKLRQCI+NGPDKYPGARM+RYPDGTARVLYGKFR
Sbjct: 241 ITEVAIPIRMARILTYPERVSDHNIEKLRQCIQNGPDKYPGARMIRYPDGTARVLYGKFR 300
Query: 3476 IRLADELKFGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYN 3297
+LA ELK GCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYN
Sbjct: 301 NQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYN 360
Query: 3296 ADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 3117
ADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT
Sbjct: 361 ADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 420
Query: 3116 FYDRAAFSLMCCYMGDGMDPVDLPTPAILKPVELWTGKQLFSVLVRPHANMRVYVNLAVK 2937
FYDRAAFSLMCCYMGDGMD VDLPTPAILKPVELWTGKQLFSVL+RPHANMRVYVNL VK
Sbjct: 421 FYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVELWTGKQLFSVLIRPHANMRVYVNLTVK 480
Query: 2936 EKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLR 2757
EKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLR
Sbjct: 481 EKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLR 540
Query: 2756 DYGAHAASGCMNRLAKLSARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYDVCNVKIK 2577
DYGAHA SGCMNRLAKLSARWIGNHGFSIGIDDVQPKKELSDKKGKLISENY+VCNVKIK
Sbjct: 541 DYGAHATSGCMNRLAKLSARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYEVCNVKIK 600
Query: 2576 EYNEGKLQLKPGCDAAQTLESVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSP 2397
EYNEGKLQLKPGCDAAQTLE+VITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSP
Sbjct: 601 EYNEGKLQLKPGCDAAQTLEAVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSP 660
Query: 2396 INISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKVPAAKGFVANSFYSGLSATEFFF 2217
INISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRK+K PAAKGFVANSFYSGLSATEFFF
Sbjct: 661 INISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKAKEPAAKGFVANSFYSGLSATEFFF 720
Query: 2216 HTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRNAGGCIVQFLYGDDGMDP 2037
HTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDN+VRNAGGCIVQFLYGDDGMDP
Sbjct: 721 HTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNSVRNAGGCIVQFLYGDDGMDP 780
Query: 2036 ANMEGKSGEPLNFDRLLMKVKATCPVARHRYLSPQQISEMVEKQLAGYGMHLKESCSEAF 1857
ANMEGKSGEPLNFDRLLMKVKATCP A RYLSPQQ+SE+VEKQLA YG KESCSEAF
Sbjct: 781 ANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVSEIVEKQLAAYG---KESCSEAF 837
Query: 1856 LNSLGKFFQGRRDKLEKKIKFVEDFDGDEKSEILEKVAHKTSGITEKQLEVFMETCFSRY 1677
LNSL KFF+G++DKL+KKIKFVED D+KS+ILE+V HKTSGITEKQLEVF++TCFSRY
Sbjct: 838 LNSLRKFFEGQQDKLDKKIKFVEDIGWDDKSQILEEVTHKTSGITEKQLEVFIQTCFSRY 897
Query: 1676 RLKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRIST 1497
R+K GEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRIST
Sbjct: 898 RVKRVEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRIST 957
Query: 1496 PIITAELEYNDNENAARVVKSRIEKTVLGQVAKSIKVVMTSRLASIVITLDMETILDAHL 1317
PIITAELE NDNENAARVVK RIEKT+LGQVAKSIK+VMTSRLASIVI LDMETI DAHL
Sbjct: 958 PIITAELECNDNENAARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHL 1017
Query: 1316 GINADVVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELHSLKNVLPMVIVK 1137
INAD+VKESI+QTPKIKLKQQHIKVLDFRKLEIFPPVDK+KIHFEL+SLKNVLPMVIVK
Sbjct: 1018 CINADIVKESIVQTPKIKLKQQHIKVLDFRKLEIFPPVDKSKIHFELYSLKNVLPMVIVK 1077
Query: 1136 GIKTXXXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEV 957
GIKT KYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEV
Sbjct: 1078 GIKTVERVVIAEKEKEKRKVKENGEKKKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEV 1137
Query: 956 QQTLGIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKS 777
QQTLGIEAARICIIDEINETMKAHGMSID RHMMLLADLMTFRGEVLGITRFGIQKMDKS
Sbjct: 1138 QQTLGIEAARICIIDEINETMKAHGMSIDKRHMMLLADLMTFRGEVLGITRFGIQKMDKS 1197
Query: 776 VLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKVRQRDAVPPMLRY 597
VLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILK+RQRDAVPPML+Y
Sbjct: 1198 VLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKIRQRDAVPPMLKY 1257
Query: 596 GAPDPILS 573
GAPDPI+S
Sbjct: 1258 GAPDPIMS 1265
>EOY20721.1 DNA-directed RNA polymerase [Theobroma cacao]
Length = 1395
Score = 2115 bits (5481), Expect = 0.0
Identities = 1063/1370 (77%), Positives = 1187/1370 (86%), Gaps = 2/1370 (0%)
Frame = -1
Query: 4676 EIMKAAEVQVFKGQYYSSNRVPIEGGLLDPRMGPANKSCTCATCHGGFSDCPGHYGYLTL 4497
EI KAAEVQV++ YY PIEGGLLDPRMGPANKS CATCHG F+DCPGHYGYL+L
Sbjct: 31 EIAKAAEVQVYQALYYDPKSRPIEGGLLDPRMGPANKSGKCATCHGNFADCPGHYGYLSL 90
Query: 4496 ALPVYNIGYLSTILDVLKCICKSCSRLLLEEKLCKDYLKKMRNPKLEALRKNDLMKSIVK 4317
ALPVYN+GYLSTILD+LKCICKSCSR++L+EKLCKDYLK+MR+PK++AL+K D+MKSIVK
Sbjct: 91 ALPVYNVGYLSTILDILKCICKSCSRIILDEKLCKDYLKRMRSPKIDALKKGDIMKSIVK 150
Query: 4316 KCSTMAS-KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTE-SLEEFASAIIHTKESKAA 4143
KCS MAS KAVKC RCGY+NG VKKAVA+LGIIHDRSK+ + SLEEF SAI HTKESKA+
Sbjct: 151 KCSAMASSKAVKCWRCGYVNGTVKKAVAMLGIIHDRSKINDNSLEEFRSAISHTKESKAS 210
Query: 4142 VNVATYILNPVKVLFLFKRITDEDCEVLYLSERPEKLIITSIAVPPIAIRPSVIMDSSQS 3963
NVATY+LNPVKVL LFKR+TD DCE+LYLS+RPEKLIIT+IAVPPI IRPSVIMD SQS
Sbjct: 211 FNVATYVLNPVKVLSLFKRMTDLDCELLYLSDRPEKLIITNIAVPPIPIRPSVIMDGSQS 270
Query: 3962 NENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQV 3783
NENDITERLKRIIQ NASL+QELVE N+AFK L GWE LQVEVAQYINSDVRGVPFSMQV
Sbjct: 271 NENDITERLKRIIQANASLRQELVETNAAFKCLGGWEMLQVEVAQYINSDVRGVPFSMQV 330
Query: 3782 ARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGIPIRMARILTYPE 3603
++PLSGFVQR+KGK GRFRGNLSGKRVEYTGRTVISPDPNLKITEV IPI MARILTYPE
Sbjct: 331 SKPLSGFVQRIKGKHGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPE 390
Query: 3602 RVSHHNIEKLRQCIRNGPDKYPGARMVRYPDGTARVLYGKFRIRLADELKFGCIVDRHLE 3423
RVS+HNIEKLRQC+RNGP KYPGARMVRYPDG+AR+L G +R RLADELKFGC+VDRHLE
Sbjct: 391 RVSNHNIEKLRQCVRNGPSKYPGARMVRYPDGSARLLIGDYRKRLADELKFGCVVDRHLE 450
Query: 3422 DGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA 3243
DGD+VLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA
Sbjct: 451 DGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA 510
Query: 3242 RTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGM 3063
RTEAL+LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKD FYDRAAFSL+C YMGDGM
Sbjct: 511 RTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDIFYDRAAFSLICSYMGDGM 570
Query: 3062 DPVDLPTPAILKPVELWTGKQLFSVLVRPHANMRVYVNLAVKEKTYSNKLIRTEGDEEIR 2883
D +DLPTPA+LKP+ELWTGKQLFSVL+RPHA++RVY+NL VKE+ YS K+I+ G++EI
Sbjct: 571 DLIDLPTPALLKPIELWTGKQLFSVLLRPHASVRVYLNLIVKERNYSKKIIKRIGNKEIE 630
Query: 2882 IETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHAASGCMNRLAKLS 2703
+ETMCP+DGFVY RNSELI GQLGKATLGNGNKDGLYSVLLRDY AHAA+ CMNRLAKLS
Sbjct: 631 VETMCPDDGFVYIRNSELICGQLGKATLGNGNKDGLYSVLLRDYNAHAAAACMNRLAKLS 690
Query: 2702 ARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYDVCNVKIKEYNEGKLQLKPGCDAAQT 2523
ARWIGNHGFSIGIDDVQP K L+D+K IS +Y C+ +I+ +NEGKL+ KPG DAAQT
Sbjct: 691 ARWIGNHGFSIGIDDVQPGKRLNDEKALTISGDYKKCDEEIQTFNEGKLKPKPGYDAAQT 750
Query: 2522 LESVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGR 2343
LE+ +T ILN IR+ GK CM L WRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGR
Sbjct: 751 LEANVTAILNNIRDKTGKVCMKELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGR 810
Query: 2342 RAPNGFIDRSLPHFPRKSKVPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTAD 2163
RAPNGFIDRSLPHF R SK PAAKGFVANSFYSGL+ATEFFFHTM GREGLVDTAVKTA+
Sbjct: 811 RAPNGFIDRSLPHFHRGSKTPAAKGFVANSFYSGLTATEFFFHTMAGREGLVDTAVKTAE 870
Query: 2162 TGYMSRRLIKALEDLSIQYDNTVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLM 1983
TGYMSRRLIKALEDLSI YDNTVRNA GCIVQF+YGDDGMDPA MEGKSG PLNFDRLLM
Sbjct: 871 TGYMSRRLIKALEDLSIHYDNTVRNASGCIVQFIYGDDGMDPACMEGKSGFPLNFDRLLM 930
Query: 1982 KVKATCPVARHRYLSPQQISEMVEKQLAGYGMHLKESCSEAFLNSLGKFFQGRRDKLEKK 1803
KVKATCP + L I +M+E+QLA + CSEAF SL F + + ++L++
Sbjct: 931 KVKATCPPIEQKCLHVGSIMQMLEEQLAKHDP--AGVCSEAFKKSLKGFLKSQTNELDRV 988
Query: 1802 IKFVEDFDGDEKSEILEKVAHKTSGITEKQLEVFMETCFSRYRLKXXXXXXXXXXXXXXX 1623
+K V + +KSEILEKV HK SGI+++QLEVF+ TC SRYR K
Sbjct: 989 MKLVNNC--AQKSEILEKVGHKISGISDRQLEVFVSTCISRYRSKVIEAGTAIGAIGAQS 1046
Query: 1622 XGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELEYNDNENAARV 1443
GEPGTQMTLKTFHFAGVASMNITQGVPRIKEIIN AKRISTP+ITAELE++DN N A++
Sbjct: 1047 IGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINAAKRISTPVITAELEFDDNPNIAQI 1106
Query: 1442 VKSRIEKTVLGQVAKSIKVVMTSRLASIVITLDMETILDAHLGINADVVKESILQTPKIK 1263
VK RIEKTVLGQVAKSIK+V+TSR AS+VITLDME ILDA L I+A++VKESILQTPKIK
Sbjct: 1107 VKGRIEKTVLGQVAKSIKIVITSRSASVVITLDMEIILDAELYIDANIVKESILQTPKIK 1166
Query: 1262 LKQQHIKVLDFRKLEIFPPVDKNKIHFELHSLKNVLPMVIVKGIKTXXXXXXXXXXXXXX 1083
LK+QH+KVLD RKLE+ PP D+++IHFELHSLKN+LP+V+VKGIKT
Sbjct: 1167 LKEQHVKVLDGRKLEVVPPADRSQIHFELHSLKNLLPLVVVKGIKTVERTVVYDKNKEKK 1226
Query: 1082 XXXXXXXXXKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEIN 903
++LLVEGTGLQAVMG EGIDG +T SNH+ E++Q LGIEAAR CIIDEI
Sbjct: 1227 NQKEEETTKHFQLLVEGTGLQAVMGIEGIDGRRTWSNHVMEMEQILGIEAARKCIIDEIA 1286
Query: 902 ETMKAHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNAS 723
+TM+ HGM+ID RHMMLLAD+MTFRGEVLGITRFGIQKMDKS+LMLASFE+TADHLFNA+
Sbjct: 1287 QTMEHHGMTIDRRHMMLLADVMTFRGEVLGITRFGIQKMDKSILMLASFERTADHLFNAA 1346
Query: 722 VNGRDDRIEGVSECIIMGIPMPLGTGILKVRQRDAVPPMLRYGAPDPILS 573
VNGRDD+IEGV+ECIIMGIPM +GTGILKV QR PPMLRYG PDP+LS
Sbjct: 1347 VNGRDDKIEGVTECIIMGIPMQIGTGILKVIQRVDPPPMLRYG-PDPVLS 1395
>XP_017973127.1 PREDICTED: DNA-directed RNA polymerase III subunit 1 isoform X1
[Theobroma cacao]
Length = 1395
Score = 2112 bits (5472), Expect = 0.0
Identities = 1062/1370 (77%), Positives = 1185/1370 (86%), Gaps = 2/1370 (0%)
Frame = -1
Query: 4676 EIMKAAEVQVFKGQYYSSNRVPIEGGLLDPRMGPANKSCTCATCHGGFSDCPGHYGYLTL 4497
EI KAAEVQV++ YY PIEGGLLDPRMGPANKS CATCHG F+DCPGHYGYL+L
Sbjct: 31 EIAKAAEVQVYQALYYDPKSRPIEGGLLDPRMGPANKSGKCATCHGNFADCPGHYGYLSL 90
Query: 4496 ALPVYNIGYLSTILDVLKCICKSCSRLLLEEKLCKDYLKKMRNPKLEALRKNDLMKSIVK 4317
ALPVYN+GYLSTILD+LKCICKSCSR++L+EKLCKDYLK+MR+PK++AL+K D+MKSIVK
Sbjct: 91 ALPVYNVGYLSTILDILKCICKSCSRIILDEKLCKDYLKRMRSPKIDALKKGDIMKSIVK 150
Query: 4316 KCSTMAS-KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTE-SLEEFASAIIHTKESKAA 4143
KCS MAS KAVKC RCGY+NG VKKAVA+LGIIHDRSK+ + SLEEF SAI HTKESKA+
Sbjct: 151 KCSAMASSKAVKCWRCGYVNGTVKKAVAMLGIIHDRSKINDNSLEEFRSAISHTKESKAS 210
Query: 4142 VNVATYILNPVKVLFLFKRITDEDCEVLYLSERPEKLIITSIAVPPIAIRPSVIMDSSQS 3963
NVATY+LNPVKVL LFKR+TD DCE+LYLS+RPEKLIIT+IAVPPI IRPSVIMD SQS
Sbjct: 211 FNVATYVLNPVKVLSLFKRMTDLDCELLYLSDRPEKLIITNIAVPPIPIRPSVIMDGSQS 270
Query: 3962 NENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQV 3783
NENDITERLKRIIQ NASL+QELVE N+AFK L GWE LQVEVAQYINSDVRGVPFSMQV
Sbjct: 271 NENDITERLKRIIQANASLRQELVETNAAFKCLGGWEMLQVEVAQYINSDVRGVPFSMQV 330
Query: 3782 ARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGIPIRMARILTYPE 3603
++PLSGFVQR+KGK GRFRGNLSGKRVEYTGRTVISPDPNLKITEV IPI MARILTYPE
Sbjct: 331 SKPLSGFVQRIKGKHGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPE 390
Query: 3602 RVSHHNIEKLRQCIRNGPDKYPGARMVRYPDGTARVLYGKFRIRLADELKFGCIVDRHLE 3423
RVS+HNIEKLRQC+RNGP KYPGARMVRYPDG+AR+L G +R RLADELKFGC+VDRHLE
Sbjct: 391 RVSNHNIEKLRQCVRNGPSKYPGARMVRYPDGSARLLIGDYRKRLADELKFGCVVDRHLE 450
Query: 3422 DGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA 3243
DGD+VLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA
Sbjct: 451 DGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA 510
Query: 3242 RTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGM 3063
RTEAL+LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKD FYDRAAFSL+C YMGDGM
Sbjct: 511 RTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDIFYDRAAFSLICSYMGDGM 570
Query: 3062 DPVDLPTPAILKPVELWTGKQLFSVLVRPHANMRVYVNLAVKEKTYSNKLIRTEGDEEIR 2883
D +DLPTPA+LKP+ELWTGKQLFSVL+RPHA++RVY+NL VKE+ YS K+I+ G++EI
Sbjct: 571 DLIDLPTPALLKPIELWTGKQLFSVLLRPHASVRVYLNLIVKERNYSKKIIKRIGNKEIE 630
Query: 2882 IETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHAASGCMNRLAKLS 2703
+ETMCP+DGFVY RNSELI GQLGKATLGNGNKDGLYSVLLRDY AHAA+ CMNRLAKLS
Sbjct: 631 VETMCPDDGFVYIRNSELICGQLGKATLGNGNKDGLYSVLLRDYNAHAAAACMNRLAKLS 690
Query: 2702 ARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYDVCNVKIKEYNEGKLQLKPGCDAAQT 2523
ARWIGNHGFSIGIDDVQP K L+D+K IS +Y C+ +I+ +NEGKL+ KPG DAAQT
Sbjct: 691 ARWIGNHGFSIGIDDVQPGKRLNDEKALTISGDYKKCDEEIQTFNEGKLKPKPGYDAAQT 750
Query: 2522 LESVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGR 2343
LE+ +T ILN IR+ GK CM L WRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGR
Sbjct: 751 LEANVTAILNNIRDKTGKVCMKELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGR 810
Query: 2342 RAPNGFIDRSLPHFPRKSKVPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTAD 2163
RAPNGFIDRSLPHF R SK PAAKGFVANSFYSGL+ATEFFFHTM GREGLVDTAVKTA+
Sbjct: 811 RAPNGFIDRSLPHFHRGSKTPAAKGFVANSFYSGLTATEFFFHTMAGREGLVDTAVKTAE 870
Query: 2162 TGYMSRRLIKALEDLSIQYDNTVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLM 1983
TGYMSRRLIKALEDLSI YDNTVRNA GCIVQF+YGDDGMDPA MEGKSG PLNFDRLLM
Sbjct: 871 TGYMSRRLIKALEDLSIHYDNTVRNASGCIVQFIYGDDGMDPACMEGKSGFPLNFDRLLM 930
Query: 1982 KVKATCPVARHRYLSPQQISEMVEKQLAGYGMHLKESCSEAFLNSLGKFFQGRRDKLEKK 1803
KVKATCP + L I M+E+QLA + CSEAF SL F + + ++L++
Sbjct: 931 KVKATCPPIEQKCLHVGSIMPMLEEQLAKHDP--AGVCSEAFKKSLKGFLKSQTNELDRV 988
Query: 1802 IKFVEDFDGDEKSEILEKVAHKTSGITEKQLEVFMETCFSRYRLKXXXXXXXXXXXXXXX 1623
+K V + +KSEILEKV HK SGI+++QLEVF+ TC SRYR K
Sbjct: 989 MKLVNNC--AQKSEILEKVGHKISGISDRQLEVFVSTCISRYRSKVIEAGTAIGAIGAQS 1046
Query: 1622 XGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELEYNDNENAARV 1443
GEPGTQMTLKTFHFAGVASMNITQGVPRIKEIIN AKRISTP+ITAELE++DN N A++
Sbjct: 1047 IGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINAAKRISTPVITAELEFDDNPNIAQI 1106
Query: 1442 VKSRIEKTVLGQVAKSIKVVMTSRLASIVITLDMETILDAHLGINADVVKESILQTPKIK 1263
VK RIEKTVLGQVAKSIK+V+TSR AS+VITLDME ILDA L I+A++VKESILQTPKIK
Sbjct: 1107 VKGRIEKTVLGQVAKSIKIVITSRSASVVITLDMEIILDAELYIDANIVKESILQTPKIK 1166
Query: 1262 LKQQHIKVLDFRKLEIFPPVDKNKIHFELHSLKNVLPMVIVKGIKTXXXXXXXXXXXXXX 1083
LK+QH+KVLD RKLE+ PP D+++IHFELHSLKN+LP+V+VKGIKT
Sbjct: 1167 LKEQHVKVLDGRKLEVVPPADRSQIHFELHSLKNLLPLVVVKGIKTVERTVVYDKNKEKK 1226
Query: 1082 XXXXXXXXXKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEIN 903
++LLVEG GLQAVMG EGIDG +T SNH+ E++Q LGIEAAR CIIDEI
Sbjct: 1227 NQKEEETTKHFQLLVEGMGLQAVMGIEGIDGRRTWSNHVMEMEQILGIEAARKCIIDEIA 1286
Query: 902 ETMKAHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNAS 723
+TM+ HGM+ID RHMMLLAD+MTFRGEVLGITRFGIQKMDKS+LMLASFE+TADHLFNA+
Sbjct: 1287 QTMEHHGMTIDRRHMMLLADVMTFRGEVLGITRFGIQKMDKSILMLASFERTADHLFNAA 1346
Query: 722 VNGRDDRIEGVSECIIMGIPMPLGTGILKVRQRDAVPPMLRYGAPDPILS 573
VNGRDD+IEGV+ECIIMGIPM +GTGILKV QR PPMLRYG PDP+LS
Sbjct: 1347 VNGRDDKIEGVTECIIMGIPMQIGTGILKVIQRVDPPPMLRYG-PDPVLS 1395
>XP_017973128.1 PREDICTED: DNA-directed RNA polymerase III subunit 1 isoform X2
[Theobroma cacao]
Length = 1381
Score = 2088 bits (5409), Expect = 0.0
Identities = 1054/1370 (76%), Positives = 1175/1370 (85%), Gaps = 2/1370 (0%)
Frame = -1
Query: 4676 EIMKAAEVQVFKGQYYSSNRVPIEGGLLDPRMGPANKSCTCATCHGGFSDCPGHYGYLTL 4497
EI KAAEVQV++ YY PIEGGLLDPRMGPANKS CATCHG F+DCPGHYGYL+L
Sbjct: 31 EIAKAAEVQVYQALYYDPKSRPIEGGLLDPRMGPANKSGKCATCHGNFADCPGHYGYLSL 90
Query: 4496 ALPVYNIGYLSTILDVLKCICKSCSRLLLEEKLCKDYLKKMRNPKLEALRKNDLMKSIVK 4317
ALPVYN+GYLSTILD+LKCICKSCSR++L+EKLCKDYLK+MR+PK++AL+K D+MKSIVK
Sbjct: 91 ALPVYNVGYLSTILDILKCICKSCSRIILDEKLCKDYLKRMRSPKIDALKKGDIMKSIVK 150
Query: 4316 KCSTMAS-KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTE-SLEEFASAIIHTKESKAA 4143
KCS MAS KAVKC RCGY+NG VKKAVA+LGIIHDRSK+ + SLEEF SAI HTKESKA+
Sbjct: 151 KCSAMASSKAVKCWRCGYVNGTVKKAVAMLGIIHDRSKINDNSLEEFRSAISHTKESKAS 210
Query: 4142 VNVATYILNPVKVLFLFKRITDEDCEVLYLSERPEKLIITSIAVPPIAIRPSVIMDSSQS 3963
NVATY+LNPVKVL LFKR+TD DCE+LYLS+RPEKLIIT+IAVPPI IRPSVIMD SQS
Sbjct: 211 FNVATYVLNPVKVLSLFKRMTDLDCELLYLSDRPEKLIITNIAVPPIPIRPSVIMDGSQS 270
Query: 3962 NENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQV 3783
NENDITERLKRIIQ NASL+QELVE N+AFK L GWE LQVEVAQYINSDVRGVPFSMQV
Sbjct: 271 NENDITERLKRIIQANASLRQELVETNAAFKCLGGWEMLQVEVAQYINSDVRGVPFSMQV 330
Query: 3782 ARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGIPIRMARILTYPE 3603
++PLSGFVQR+KGK GRFRGNLSGKRVEYTGRTVISPDPNLKITEV IPI MARILTYPE
Sbjct: 331 SKPLSGFVQRIKGKHGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPE 390
Query: 3602 RVSHHNIEKLRQCIRNGPDKYPGARMVRYPDGTARVLYGKFRIRLADELKFGCIVDRHLE 3423
RVS+HNIEKLRQC+RNGP KYPGARMVRYPDG+AR+L G +R RLADELKFGC+VDRHLE
Sbjct: 391 RVSNHNIEKLRQCVRNGPSKYPGARMVRYPDGSARLLIGDYRKRLADELKFGCVVDRHLE 450
Query: 3422 DGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA 3243
DGD+VLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA
Sbjct: 451 DGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA 510
Query: 3242 RTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGM 3063
RTEAL+LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKD FYDRAAFSL+C YMGDGM
Sbjct: 511 RTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDIFYDRAAFSLICSYMGDGM 570
Query: 3062 DPVDLPTPAILKPVELWTGKQLFSVLVRPHANMRVYVNLAVKEKTYSNKLIRTEGDEEIR 2883
D +DLPTPA+LKP+ELWTGKQLFSVL+RPHA++RVY+NL VKE+ YS K+I+ G++EI
Sbjct: 571 DLIDLPTPALLKPIELWTGKQLFSVLLRPHASVRVYLNLIVKERNYSKKIIKRIGNKEIE 630
Query: 2882 IETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHAASGCMNRLAKLS 2703
+ETMCP+DGFVY RNSELI GQLGKATLGNGNKDGLYSVLLRDY AHAA+ CMNRLAKLS
Sbjct: 631 VETMCPDDGFVYIRNSELICGQLGKATLGNGNKDGLYSVLLRDYNAHAAAACMNRLAKLS 690
Query: 2702 ARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYDVCNVKIKEYNEGKLQLKPGCDAAQT 2523
ARWIGNHGFSIGIDDVQP K L+D+K IS +Y C+ +I+ +NEGKL+ KPG DAAQT
Sbjct: 691 ARWIGNHGFSIGIDDVQPGKRLNDEKALTISGDYKKCDEEIQTFNEGKLKPKPGYDAAQT 750
Query: 2522 LESVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGR 2343
LE+ CM L WRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGR
Sbjct: 751 LEA--------------NVCMKELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGR 796
Query: 2342 RAPNGFIDRSLPHFPRKSKVPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTAD 2163
RAPNGFIDRSLPHF R SK PAAKGFVANSFYSGL+ATEFFFHTM GREGLVDTAVKTA+
Sbjct: 797 RAPNGFIDRSLPHFHRGSKTPAAKGFVANSFYSGLTATEFFFHTMAGREGLVDTAVKTAE 856
Query: 2162 TGYMSRRLIKALEDLSIQYDNTVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLM 1983
TGYMSRRLIKALEDLSI YDNTVRNA GCIVQF+YGDDGMDPA MEGKSG PLNFDRLLM
Sbjct: 857 TGYMSRRLIKALEDLSIHYDNTVRNASGCIVQFIYGDDGMDPACMEGKSGFPLNFDRLLM 916
Query: 1982 KVKATCPVARHRYLSPQQISEMVEKQLAGYGMHLKESCSEAFLNSLGKFFQGRRDKLEKK 1803
KVKATCP + L I M+E+QLA + CSEAF SL F + + ++L++
Sbjct: 917 KVKATCPPIEQKCLHVGSIMPMLEEQLAKHDP--AGVCSEAFKKSLKGFLKSQTNELDRV 974
Query: 1802 IKFVEDFDGDEKSEILEKVAHKTSGITEKQLEVFMETCFSRYRLKXXXXXXXXXXXXXXX 1623
+K V + +KSEILEKV HK SGI+++QLEVF+ TC SRYR K
Sbjct: 975 MKLVNNC--AQKSEILEKVGHKISGISDRQLEVFVSTCISRYRSKVIEAGTAIGAIGAQS 1032
Query: 1622 XGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELEYNDNENAARV 1443
GEPGTQMTLKTFHFAGVASMNITQGVPRIKEIIN AKRISTP+ITAELE++DN N A++
Sbjct: 1033 IGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINAAKRISTPVITAELEFDDNPNIAQI 1092
Query: 1442 VKSRIEKTVLGQVAKSIKVVMTSRLASIVITLDMETILDAHLGINADVVKESILQTPKIK 1263
VK RIEKTVLGQVAKSIK+V+TSR AS+VITLDME ILDA L I+A++VKESILQTPKIK
Sbjct: 1093 VKGRIEKTVLGQVAKSIKIVITSRSASVVITLDMEIILDAELYIDANIVKESILQTPKIK 1152
Query: 1262 LKQQHIKVLDFRKLEIFPPVDKNKIHFELHSLKNVLPMVIVKGIKTXXXXXXXXXXXXXX 1083
LK+QH+KVLD RKLE+ PP D+++IHFELHSLKN+LP+V+VKGIKT
Sbjct: 1153 LKEQHVKVLDGRKLEVVPPADRSQIHFELHSLKNLLPLVVVKGIKTVERTVVYDKNKEKK 1212
Query: 1082 XXXXXXXXXKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEIN 903
++LLVEG GLQAVMG EGIDG +T SNH+ E++Q LGIEAAR CIIDEI
Sbjct: 1213 NQKEEETTKHFQLLVEGMGLQAVMGIEGIDGRRTWSNHVMEMEQILGIEAARKCIIDEIA 1272
Query: 902 ETMKAHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNAS 723
+TM+ HGM+ID RHMMLLAD+MTFRGEVLGITRFGIQKMDKS+LMLASFE+TADHLFNA+
Sbjct: 1273 QTMEHHGMTIDRRHMMLLADVMTFRGEVLGITRFGIQKMDKSILMLASFERTADHLFNAA 1332
Query: 722 VNGRDDRIEGVSECIIMGIPMPLGTGILKVRQRDAVPPMLRYGAPDPILS 573
VNGRDD+IEGV+ECIIMGIPM +GTGILKV QR PPMLRYG PDP+LS
Sbjct: 1333 VNGRDDKIEGVTECIIMGIPMQIGTGILKVIQRVDPPPMLRYG-PDPVLS 1381
>XP_012471450.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
[Gossypium raimondii] KJB20224.1 hypothetical protein
B456_003G139100 [Gossypium raimondii]
Length = 1398
Score = 2048 bits (5305), Expect = 0.0
Identities = 1027/1370 (74%), Positives = 1160/1370 (84%), Gaps = 2/1370 (0%)
Frame = -1
Query: 4676 EIMKAAEVQVFKGQYYSSNRVPIEGGLLDPRMGPANKSCTCATCHGGFSDCPGHYGYLTL 4497
EI KAAEVQV+KG YY PIEGGLLDPRMGP NKS CATC G F DCPGHYGYL L
Sbjct: 36 EIAKAAEVQVYKGVYYDLQSRPIEGGLLDPRMGPPNKSGKCATCDGSFGDCPGHYGYLPL 95
Query: 4496 ALPVYNIGYLSTILDVLKCICKSCSRLLLEEKLCKDYLKKMRNPKLEALRKNDLMKSIVK 4317
LPVYN+GYLSTILD+LKCICKSCSR+LL++KL KDYLKKMR PK E L+K ++MKS+VK
Sbjct: 96 VLPVYNVGYLSTILDILKCICKSCSRILLDDKLAKDYLKKMRAPKTEPLKKAEIMKSVVK 155
Query: 4316 KCSTMAS-KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTE-SLEEFASAIIHTKESKAA 4143
KC+ MA KAVKC RCGY+NG VKKA ++G+ HDRSKV + SLEE SAI HTKESK++
Sbjct: 156 KCTAMAGGKAVKCSRCGYLNGTVKKAPKMIGVFHDRSKVNDNSLEELKSAISHTKESKSS 215
Query: 4142 VNVATYILNPVKVLFLFKRITDEDCEVLYLSERPEKLIITSIAVPPIAIRPSVIMDSSQS 3963
+N ++ +LNPVKVL LFKR+TD DCE+LYLS+RPEK IIT+IAVPP AIRPSV +D SQS
Sbjct: 216 INTSS-VLNPVKVLSLFKRMTDVDCELLYLSDRPEKFIITNIAVPPTAIRPSVPVDGSQS 274
Query: 3962 NENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQV 3783
NENDITERLKRIIQ N+SL+Q+LV++N+AF L GW+ LQV+VAQYINSDVRGVP MQ
Sbjct: 275 NENDITERLKRIIQANSSLRQQLVDSNAAFHCLNGWDLLQVDVAQYINSDVRGVPTEMQP 334
Query: 3782 ARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGIPIRMARILTYPE 3603
ARPLSGF+QRLKGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEV IPI MARIL+YPE
Sbjct: 335 ARPLSGFLQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPIHMARILSYPE 394
Query: 3602 RVSHHNIEKLRQCIRNGPDKYPGARMVRYPDGTARVLYGKFRIRLADELKFGCIVDRHLE 3423
RVS HNIEKLRQC+RNGP KYPGA VRYPDG+AR+L G +R RLADELKFGCIVDRHLE
Sbjct: 395 RVSSHNIEKLRQCVRNGPSKYPGAVKVRYPDGSARLLIGDYRKRLADELKFGCIVDRHLE 454
Query: 3422 DGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA 3243
DGD+VLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA
Sbjct: 455 DGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA 514
Query: 3242 RTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGM 3063
RTEAL+LMGVQNNLCTPKNGE+LVASTQDFLTSSFLITR+DTFYDRA FSL+C YMGD M
Sbjct: 515 RTEALMLMGVQNNLCTPKNGEVLVASTQDFLTSSFLITRRDTFYDRATFSLICSYMGDAM 574
Query: 3062 DPVDLPTPAILKPVELWTGKQLFSVLVRPHANMRVYVNLAVKEKTYSNKLIRTEGDEEIR 2883
D +DLPTP +LKPVELWTGKQLF+VL+RPHA++RVY+NL VKE+ YS K+ + GD+EI
Sbjct: 575 DLIDLPTPTLLKPVELWTGKQLFNVLLRPHASVRVYLNLTVKERNYSRKIAKRIGDKEIE 634
Query: 2882 IETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHAASGCMNRLAKLS 2703
+ETMCPNDGFVY RNSEL+ GQLGKATLGNGNKDGLYS+LLRDY AHAA+ CMNRLAK+S
Sbjct: 635 VETMCPNDGFVYIRNSELLCGQLGKATLGNGNKDGLYSILLRDYNAHAAATCMNRLAKMS 694
Query: 2702 ARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYDVCNVKIKEYNEGKLQLKPGCDAAQT 2523
ARWIGNHGFSIGIDDVQP K L+D KG +S NY C+ +I+ +NEGKLQLKPGCDAAQT
Sbjct: 695 ARWIGNHGFSIGIDDVQPGKRLNDAKGVTLSGNYKKCDEQIQMFNEGKLQLKPGCDAAQT 754
Query: 2522 LESVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGR 2343
LE+ IT++LN+IR++ GK CM L WRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGR
Sbjct: 755 LEANITEVLNKIRDETGKVCMRELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGR 814
Query: 2342 RAPNGFIDRSLPHFPRKSKVPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTAD 2163
RAPNGFIDRSLPHF R SK PAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDTAVKTA+
Sbjct: 815 RAPNGFIDRSLPHFHRGSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTAE 874
Query: 2162 TGYMSRRLIKALEDLSIQYDNTVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLM 1983
TGYMSRRLIKALEDLSI YDNT RNA GCIVQF+YGDDGMDPA+MEGKSG PLNFDRLLM
Sbjct: 875 TGYMSRRLIKALEDLSIHYDNTCRNASGCIVQFIYGDDGMDPASMEGKSGFPLNFDRLLM 934
Query: 1982 KVKATCPVARHRYLSPQQISEMVEKQLAGYGMHLKESCSEAFLNSLGKFFQGRRDKLEKK 1803
KVKATCP +YL I +M+E+Q+ + CSEAF SL F +G++++L++
Sbjct: 935 KVKATCPPVDQKYLPADAIPQMLEEQVVKHDP--DGVCSEAFKKSLKGFLEGQKNELKRV 992
Query: 1802 IKFVEDFDGDEKSEILEKVAHKTSGITEKQLEVFMETCFSRYRLKXXXXXXXXXXXXXXX 1623
++ V + +KSEILE V+HK GIT++QLEVF+ C RYR K
Sbjct: 993 MQLVS--NSAQKSEILEDVSHKICGITDRQLEVFIRICIGRYRSKVIEAGTAIGAIGAQS 1050
Query: 1622 XGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELEYNDNENAARV 1443
GEPGTQMTLKTFHFAGVASMNITQGVPRIKEIIN AK+ISTPIITAELE++ N N AR+
Sbjct: 1051 IGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINAAKKISTPIITAELEFDSNVNVARM 1110
Query: 1442 VKSRIEKTVLGQVAKSIKVVMTSRLASIVITLDMETILDAHLGINADVVKESILQTPKIK 1263
VK RIEKTVLGQVAKSIK+VMTSRLAS+VI+LDME I DA L I+A+VVKESILQTPK+K
Sbjct: 1111 VKGRIEKTVLGQVAKSIKIVMTSRLASVVISLDMERIQDAQLHIDANVVKESILQTPKLK 1170
Query: 1262 LKQQHIKVLDFRKLEIFPPVDKNKIHFELHSLKNVLPMVIVKGIKTXXXXXXXXXXXXXX 1083
LK+QH+KVLD +KLE+ PP D+++IHFELHSLKN+LP+V+VKGIKT
Sbjct: 1171 LKEQHVKVLDVKKLEVVPPADRSRIHFELHSLKNLLPLVVVKGIKT-VERVVIAEKKKDN 1229
Query: 1082 XXXXXXXXXKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEIN 903
Y+L VEG GLQ VMG EGIDG KT SNH+ E+ Q LGIEAAR CII+EI
Sbjct: 1230 KSQNKEAKKLYQLFVEGMGLQTVMGVEGIDGRKTMSNHVMEMLQILGIEAARSCIINEIA 1289
Query: 902 ETMKAHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNAS 723
TM +HGMSIDIRHMMLL D+MTFRGEVLGITRFGIQKMDKS+LMLASFEKT DHLFNAS
Sbjct: 1290 ATMASHGMSIDIRHMMLLGDVMTFRGEVLGITRFGIQKMDKSILMLASFEKTGDHLFNAS 1349
Query: 722 VNGRDDRIEGVSECIIMGIPMPLGTGILKVRQRDAVPPMLRYGAPDPILS 573
VNGRDD+IEGV+ECIIMGIPM LGTGILKV QR P+L+YGA DP+LS
Sbjct: 1350 VNGRDDKIEGVTECIIMGIPMQLGTGILKVMQRVDPLPLLQYGA-DPVLS 1398
>XP_017619485.1 PREDICTED: DNA-directed RNA polymerase III subunit 1 [Gossypium
arboreum]
Length = 1398
Score = 2041 bits (5289), Expect = 0.0
Identities = 1024/1370 (74%), Positives = 1158/1370 (84%), Gaps = 2/1370 (0%)
Frame = -1
Query: 4676 EIMKAAEVQVFKGQYYSSNRVPIEGGLLDPRMGPANKSCTCATCHGGFSDCPGHYGYLTL 4497
EI KAAEVQV+KG YY PIEGGLLDPRMGP NKS CATC G F DCPGHYGYL L
Sbjct: 36 EIAKAAEVQVYKGVYYDPQSRPIEGGLLDPRMGPPNKSGKCATCDGSFGDCPGHYGYLPL 95
Query: 4496 ALPVYNIGYLSTILDVLKCICKSCSRLLLEEKLCKDYLKKMRNPKLEALRKNDLMKSIVK 4317
LPVYN+GYLSTILD+LKCICKSCSR+LL++KL KDYLKKMR PK E L+K ++MKS+VK
Sbjct: 96 VLPVYNVGYLSTILDILKCICKSCSRILLDDKLAKDYLKKMRAPKTEPLKKAEIMKSVVK 155
Query: 4316 KCSTMAS-KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTE-SLEEFASAIIHTKESKAA 4143
KC+ MA KAVKC RCGY+NG VKKA ++G+ HDRSKV + S EE SAI HTKESK++
Sbjct: 156 KCTAMAGGKAVKCSRCGYLNGTVKKAPKMIGVFHDRSKVNDNSSEELKSAISHTKESKSS 215
Query: 4142 VNVATYILNPVKVLFLFKRITDEDCEVLYLSERPEKLIITSIAVPPIAIRPSVIMDSSQS 3963
+N ++ +LNPVKVL LFKR+TD DCE+LYLS+RPEK II +IAVPP AIRPSV +D SQS
Sbjct: 216 INTSS-VLNPVKVLSLFKRMTDVDCELLYLSDRPEKFIIMNIAVPPTAIRPSVPVDGSQS 274
Query: 3962 NENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQV 3783
NENDITERLKRIIQ N+SL+Q+LV++N+AF L GW+ LQV+VAQYINSDVRGVP MQ
Sbjct: 275 NENDITERLKRIIQANSSLRQQLVDSNAAFHCLNGWDLLQVDVAQYINSDVRGVPTEMQP 334
Query: 3782 ARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGIPIRMARILTYPE 3603
+RPLSGF+QRLKGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEV IPI MARIL+YPE
Sbjct: 335 SRPLSGFLQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPIHMARILSYPE 394
Query: 3602 RVSHHNIEKLRQCIRNGPDKYPGARMVRYPDGTARVLYGKFRIRLADELKFGCIVDRHLE 3423
RVS HNIEKLRQC+RNGP KYPGA VRYPDG+AR+L G +R RLADELKFGCIVDRHLE
Sbjct: 395 RVSSHNIEKLRQCVRNGPSKYPGAVKVRYPDGSARLLIGDYRKRLADELKFGCIVDRHLE 454
Query: 3422 DGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA 3243
DGD+VLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA
Sbjct: 455 DGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA 514
Query: 3242 RTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGM 3063
RTEAL+LMGVQNNLCTPKNGE+LVASTQDFLTSSFLITR+DTFYDRA FSL+C YMGD M
Sbjct: 515 RTEALMLMGVQNNLCTPKNGEVLVASTQDFLTSSFLITRRDTFYDRATFSLICSYMGDAM 574
Query: 3062 DPVDLPTPAILKPVELWTGKQLFSVLVRPHANMRVYVNLAVKEKTYSNKLIRTEGDEEIR 2883
D +DLPTP +LKPVELWTGKQLF+VL+RPHA++RVY+NL VKE+ YS K+ + GD+EI
Sbjct: 575 DLIDLPTPTLLKPVELWTGKQLFNVLLRPHASVRVYLNLTVKERNYSRKIAKRIGDKEIE 634
Query: 2882 IETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHAASGCMNRLAKLS 2703
+ETMCPNDGFVY RNSELI GQLGKATLGNGNKDGLYS+LLRDY AHAA+ CMNRLAK+S
Sbjct: 635 VETMCPNDGFVYIRNSELICGQLGKATLGNGNKDGLYSILLRDYNAHAAATCMNRLAKMS 694
Query: 2702 ARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYDVCNVKIKEYNEGKLQLKPGCDAAQT 2523
ARWIGNHGFSIGIDDVQP K L+D KG +S NY C+ +I+ +NEGKLQLKPGCDAAQT
Sbjct: 695 ARWIGNHGFSIGIDDVQPGKRLNDAKGVTLSGNYKKCDEQIQMFNEGKLQLKPGCDAAQT 754
Query: 2522 LESVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGR 2343
LE+ IT++LN+IR++ GK CM L WRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGR
Sbjct: 755 LEANITEVLNKIRDETGKVCMRELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGR 814
Query: 2342 RAPNGFIDRSLPHFPRKSKVPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTAD 2163
RAPNGFIDRSLPHF R SK PAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDTAVKTA+
Sbjct: 815 RAPNGFIDRSLPHFHRGSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTAE 874
Query: 2162 TGYMSRRLIKALEDLSIQYDNTVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLM 1983
TGYMSRRLIKALEDLSI YDNT RNA GCIVQF+YGDDGMDPA+MEGKSG PLNFDRLLM
Sbjct: 875 TGYMSRRLIKALEDLSIHYDNTCRNASGCIVQFIYGDDGMDPASMEGKSGFPLNFDRLLM 934
Query: 1982 KVKATCPVARHRYLSPQQISEMVEKQLAGYGMHLKESCSEAFLNSLGKFFQGRRDKLEKK 1803
KVKATCP +YL I +M+E+Q+ + CSEAF SL F +G++++L++
Sbjct: 935 KVKATCPPVDQKYLPADAIPQMLEEQVVKHDP--DGVCSEAFKKSLKGFLEGQKNELKRV 992
Query: 1802 IKFVEDFDGDEKSEILEKVAHKTSGITEKQLEVFMETCFSRYRLKXXXXXXXXXXXXXXX 1623
++ V + +K+EILE V+HK GIT++QLEVF+ C RYR K
Sbjct: 993 MQLVS--NSAQKNEILEDVSHKICGITDRQLEVFIRICIGRYRSKVIEAGTAIGAIGAQS 1050
Query: 1622 XGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELEYNDNENAARV 1443
GEPGTQMTLKTFHFAGVASMNITQGVPRIKEIIN AK+ISTPIITAELE++ N N AR+
Sbjct: 1051 IGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINAAKKISTPIITAELEFDSNVNVARM 1110
Query: 1442 VKSRIEKTVLGQVAKSIKVVMTSRLASIVITLDMETILDAHLGINADVVKESILQTPKIK 1263
VK RIEKTVLGQVAKSIK+VMTSRLAS+VI+LDME I DA L I+A+VVKESILQTPK+K
Sbjct: 1111 VKGRIEKTVLGQVAKSIKIVMTSRLASVVISLDMERIQDAQLHIDANVVKESILQTPKLK 1170
Query: 1262 LKQQHIKVLDFRKLEIFPPVDKNKIHFELHSLKNVLPMVIVKGIKTXXXXXXXXXXXXXX 1083
LK+QH+KVLD +KLE+ PP D+++IHFELHSLKN+LP+V+VKGIK
Sbjct: 1171 LKEQHVKVLDVKKLEVVPPADRSRIHFELHSLKNLLPLVVVKGIKN-VERVVIAEKKKDN 1229
Query: 1082 XXXXXXXXXKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEIN 903
Y+L VEG GLQ VMG EGIDG KT SNH+ E+ Q LGIEAAR CII+EI
Sbjct: 1230 KSQNKEAKKLYQLFVEGMGLQTVMGVEGIDGRKTMSNHVMEMLQILGIEAARSCIINEIA 1289
Query: 902 ETMKAHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNAS 723
TM +HGMSIDIRHMMLLAD+MTFRGEVLGITRFGIQKMDKS+LMLASFEKT DHLFNAS
Sbjct: 1290 ATMASHGMSIDIRHMMLLADVMTFRGEVLGITRFGIQKMDKSILMLASFEKTGDHLFNAS 1349
Query: 722 VNGRDDRIEGVSECIIMGIPMPLGTGILKVRQRDAVPPMLRYGAPDPILS 573
VNGRDD+IEGV+ECIIMGIPM LGTGILKV QR P+L+YGA DP+LS
Sbjct: 1350 VNGRDDKIEGVTECIIMGIPMQLGTGILKVMQRVDPLPLLQYGA-DPVLS 1398
>XP_016665225.1 PREDICTED: DNA-directed RNA polymerase III subunit 1-like isoform X1
[Gossypium hirsutum]
Length = 1398
Score = 2041 bits (5289), Expect = 0.0
Identities = 1024/1370 (74%), Positives = 1158/1370 (84%), Gaps = 2/1370 (0%)
Frame = -1
Query: 4676 EIMKAAEVQVFKGQYYSSNRVPIEGGLLDPRMGPANKSCTCATCHGGFSDCPGHYGYLTL 4497
EI KAAEVQV+KG YY PIEGGLLDPRMGP NKS CATC G F DCPGHYGYL L
Sbjct: 36 EIAKAAEVQVYKGVYYDPQSRPIEGGLLDPRMGPPNKSGKCATCDGSFGDCPGHYGYLPL 95
Query: 4496 ALPVYNIGYLSTILDVLKCICKSCSRLLLEEKLCKDYLKKMRNPKLEALRKNDLMKSIVK 4317
LPVYN+GYLSTILD+LKCICKSCSR+LL++KL KDYLKKMR PK E L+K ++MKS+VK
Sbjct: 96 VLPVYNVGYLSTILDILKCICKSCSRILLDDKLAKDYLKKMRAPKTEPLKKAEIMKSVVK 155
Query: 4316 KCSTMAS-KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTE-SLEEFASAIIHTKESKAA 4143
KC+ MA KAVKC RCGY+NG VKKA ++G+ HDRSKV + S EE SAI HTKESK++
Sbjct: 156 KCTAMAGGKAVKCSRCGYLNGTVKKAPKMIGVFHDRSKVNDNSSEELKSAISHTKESKSS 215
Query: 4142 VNVATYILNPVKVLFLFKRITDEDCEVLYLSERPEKLIITSIAVPPIAIRPSVIMDSSQS 3963
+N ++ +LNPVKVL LFKR+TD DCE+LYLS+RPEK IIT+IAVPP AIRPSV +D SQS
Sbjct: 216 INTSS-VLNPVKVLSLFKRMTDVDCELLYLSDRPEKFIITNIAVPPTAIRPSVPVDGSQS 274
Query: 3962 NENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQV 3783
NENDITERLKRIIQ N+SL+Q+LV++N+AF L GW+ LQV+VAQYINSDVRGVP MQ
Sbjct: 275 NENDITERLKRIIQANSSLRQQLVDSNAAFHCLNGWDLLQVDVAQYINSDVRGVPTEMQP 334
Query: 3782 ARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGIPIRMARILTYPE 3603
+RPLSGF+QRLKGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEV IPI MARIL+YPE
Sbjct: 335 SRPLSGFLQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPIHMARILSYPE 394
Query: 3602 RVSHHNIEKLRQCIRNGPDKYPGARMVRYPDGTARVLYGKFRIRLADELKFGCIVDRHLE 3423
RVS HNIEKLRQC+RNGP KYPGA VRYPDG+AR+L G +R RLADELKFGCIVDRHLE
Sbjct: 395 RVSSHNIEKLRQCVRNGPSKYPGAVKVRYPDGSARLLIGDYRKRLADELKFGCIVDRHLE 454
Query: 3422 DGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA 3243
DGD+VLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA
Sbjct: 455 DGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA 514
Query: 3242 RTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGM 3063
RTEAL+LMGVQNNLCTPKNGE+LVASTQDFLTSSFLITR+DTFYDRA FSL+C YM D M
Sbjct: 515 RTEALMLMGVQNNLCTPKNGEVLVASTQDFLTSSFLITRRDTFYDRATFSLICSYMSDAM 574
Query: 3062 DPVDLPTPAILKPVELWTGKQLFSVLVRPHANMRVYVNLAVKEKTYSNKLIRTEGDEEIR 2883
D +DLPTP +LKPVELWTGKQLF+VL+RPHA++RVY+NL VKE+ YS K+ + GD+EI
Sbjct: 575 DLIDLPTPTLLKPVELWTGKQLFNVLLRPHASVRVYLNLTVKERNYSRKIAKRIGDKEIE 634
Query: 2882 IETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHAASGCMNRLAKLS 2703
+ETMCPNDGFVY RNSELI GQLGKATLGNGNKDGLYS+LLRDY AHAA+ CMNRLAK+S
Sbjct: 635 VETMCPNDGFVYIRNSELICGQLGKATLGNGNKDGLYSILLRDYNAHAAATCMNRLAKMS 694
Query: 2702 ARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYDVCNVKIKEYNEGKLQLKPGCDAAQT 2523
ARWIGNHGFSIGIDDVQP K L+D KG +S NY C+ +I+ +NEGKLQLKPGCDAAQT
Sbjct: 695 ARWIGNHGFSIGIDDVQPGKRLNDAKGVTLSGNYKKCDEQIQMFNEGKLQLKPGCDAAQT 754
Query: 2522 LESVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGR 2343
LE+ IT++LN+IR++ GK CM L WRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGR
Sbjct: 755 LEANITEVLNKIRDETGKVCMRELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGR 814
Query: 2342 RAPNGFIDRSLPHFPRKSKVPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTAD 2163
RAPNGFIDRSLPHF R SK PAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDTAVKTA+
Sbjct: 815 RAPNGFIDRSLPHFHRGSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTAE 874
Query: 2162 TGYMSRRLIKALEDLSIQYDNTVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLM 1983
TGYMSRRLIKALEDLSI YDNT RNA GCIVQF+YGDDGMDPA+MEGKSG PLNFDRLLM
Sbjct: 875 TGYMSRRLIKALEDLSIHYDNTCRNASGCIVQFIYGDDGMDPASMEGKSGFPLNFDRLLM 934
Query: 1982 KVKATCPVARHRYLSPQQISEMVEKQLAGYGMHLKESCSEAFLNSLGKFFQGRRDKLEKK 1803
KVKATCP +YL I +M+E+Q+ + CSEAF SL F +G++++L++
Sbjct: 935 KVKATCPPVDQKYLPADAIPQMLEEQVVKHDP--DGVCSEAFKKSLKGFLEGQKNELKRV 992
Query: 1802 IKFVEDFDGDEKSEILEKVAHKTSGITEKQLEVFMETCFSRYRLKXXXXXXXXXXXXXXX 1623
++ V + +K+EILE V+HK GIT++QLEVF+ C RYR K
Sbjct: 993 LQLVS--NSAQKNEILEDVSHKICGITDRQLEVFIRICIGRYRSKVIEAGTAIGAIGAQS 1050
Query: 1622 XGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELEYNDNENAARV 1443
GEPGTQMTLKTFHFAGVASMNITQGVPRIKEIIN AK+ISTPIITAELE++ N N AR+
Sbjct: 1051 IGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINAAKKISTPIITAELEFDSNVNIARM 1110
Query: 1442 VKSRIEKTVLGQVAKSIKVVMTSRLASIVITLDMETILDAHLGINADVVKESILQTPKIK 1263
VK RIEKTVLGQVAKSIK+VMTSRLAS+VI+LDME I DA L I+A+VVKESILQTPK+K
Sbjct: 1111 VKGRIEKTVLGQVAKSIKIVMTSRLASVVISLDMERIQDAQLHIDANVVKESILQTPKLK 1170
Query: 1262 LKQQHIKVLDFRKLEIFPPVDKNKIHFELHSLKNVLPMVIVKGIKTXXXXXXXXXXXXXX 1083
LK+QH+KVLD +KLE+ PP D+++IHFELHSLKN+LP+V+VKGIK
Sbjct: 1171 LKEQHVKVLDVKKLEVVPPADRSRIHFELHSLKNLLPLVVVKGIKN-VERVVIAEKKKDN 1229
Query: 1082 XXXXXXXXXKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEIN 903
Y+L VEG GLQ VMG EGIDG KT SNH+ E+ Q LGIEAAR CII+EI
Sbjct: 1230 KSQNKEAKKLYQLFVEGMGLQTVMGVEGIDGRKTMSNHVMEMLQILGIEAARSCIINEIA 1289
Query: 902 ETMKAHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNAS 723
TM +HGMSIDIRHMMLLAD+MTFRGEVLGITRFGIQKMDKS+LMLASFEKT DHLFNAS
Sbjct: 1290 ATMASHGMSIDIRHMMLLADVMTFRGEVLGITRFGIQKMDKSILMLASFEKTGDHLFNAS 1349
Query: 722 VNGRDDRIEGVSECIIMGIPMPLGTGILKVRQRDAVPPMLRYGAPDPILS 573
VNGRDD+IEGV+ECIIMGIPM LGTGILKV QR P+L+YGA DP+LS
Sbjct: 1350 VNGRDDKIEGVTECIIMGIPMQLGTGILKVMQRVDPLPLLQYGA-DPVLS 1398
>XP_012471451.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
[Gossypium raimondii]
Length = 1395
Score = 2037 bits (5278), Expect = 0.0
Identities = 1024/1370 (74%), Positives = 1157/1370 (84%), Gaps = 2/1370 (0%)
Frame = -1
Query: 4676 EIMKAAEVQVFKGQYYSSNRVPIEGGLLDPRMGPANKSCTCATCHGGFSDCPGHYGYLTL 4497
EI KAAEVQV+KG YY PIEGGLLDPRMGP NKS CATC G F DCPGHYGYL L
Sbjct: 36 EIAKAAEVQVYKGVYYDLQSRPIEGGLLDPRMGPPNKSGKCATCDGSFGDCPGHYGYLPL 95
Query: 4496 ALPVYNIGYLSTILDVLKCICKSCSRLLLEEKLCKDYLKKMRNPKLEALRKNDLMKSIVK 4317
LPVYN+GYLSTILD+LKCICKSCSR+LL++KL KDYLKKMR PK E L+K ++MKS+VK
Sbjct: 96 VLPVYNVGYLSTILDILKCICKSCSRILLDDKLAKDYLKKMRAPKTEPLKKAEIMKSVVK 155
Query: 4316 KCSTMAS-KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTE-SLEEFASAIIHTKESKAA 4143
KC+ MA KAVKC RCGY+NG VKKA ++G+ HDRSKV + SLEE SAI HTKESK++
Sbjct: 156 KCTAMAGGKAVKCSRCGYLNGTVKKAPKMIGVFHDRSKVNDNSLEELKSAISHTKESKSS 215
Query: 4142 VNVATYILNPVKVLFLFKRITDEDCEVLYLSERPEKLIITSIAVPPIAIRPSVIMDSSQS 3963
+N ++ +LNPVKVL LFKR+TD DCE+LYLS+RPEK IIT+IAVPP AIRPSV +D
Sbjct: 216 INTSS-VLNPVKVLSLFKRMTDVDCELLYLSDRPEKFIITNIAVPPTAIRPSVPVDG--- 271
Query: 3962 NENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQV 3783
NENDITERLKRIIQ N+SL+Q+LV++N+AF L GW+ LQV+VAQYINSDVRGVP MQ
Sbjct: 272 NENDITERLKRIIQANSSLRQQLVDSNAAFHCLNGWDLLQVDVAQYINSDVRGVPTEMQP 331
Query: 3782 ARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGIPIRMARILTYPE 3603
ARPLSGF+QRLKGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEV IPI MARIL+YPE
Sbjct: 332 ARPLSGFLQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPIHMARILSYPE 391
Query: 3602 RVSHHNIEKLRQCIRNGPDKYPGARMVRYPDGTARVLYGKFRIRLADELKFGCIVDRHLE 3423
RVS HNIEKLRQC+RNGP KYPGA VRYPDG+AR+L G +R RLADELKFGCIVDRHLE
Sbjct: 392 RVSSHNIEKLRQCVRNGPSKYPGAVKVRYPDGSARLLIGDYRKRLADELKFGCIVDRHLE 451
Query: 3422 DGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA 3243
DGD+VLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA
Sbjct: 452 DGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA 511
Query: 3242 RTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGM 3063
RTEAL+LMGVQNNLCTPKNGE+LVASTQDFLTSSFLITR+DTFYDRA FSL+C YMGD M
Sbjct: 512 RTEALMLMGVQNNLCTPKNGEVLVASTQDFLTSSFLITRRDTFYDRATFSLICSYMGDAM 571
Query: 3062 DPVDLPTPAILKPVELWTGKQLFSVLVRPHANMRVYVNLAVKEKTYSNKLIRTEGDEEIR 2883
D +DLPTP +LKPVELWTGKQLF+VL+RPHA++RVY+NL VKE+ YS K+ + GD+EI
Sbjct: 572 DLIDLPTPTLLKPVELWTGKQLFNVLLRPHASVRVYLNLTVKERNYSRKIAKRIGDKEIE 631
Query: 2882 IETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHAASGCMNRLAKLS 2703
+ETMCPNDGFVY RNSEL+ GQLGKATLGNGNKDGLYS+LLRDY AHAA+ CMNRLAK+S
Sbjct: 632 VETMCPNDGFVYIRNSELLCGQLGKATLGNGNKDGLYSILLRDYNAHAAATCMNRLAKMS 691
Query: 2702 ARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYDVCNVKIKEYNEGKLQLKPGCDAAQT 2523
ARWIGNHGFSIGIDDVQP K L+D KG +S NY C+ +I+ +NEGKLQLKPGCDAAQT
Sbjct: 692 ARWIGNHGFSIGIDDVQPGKRLNDAKGVTLSGNYKKCDEQIQMFNEGKLQLKPGCDAAQT 751
Query: 2522 LESVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGR 2343
LE+ IT++LN+IR++ GK CM L WRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGR
Sbjct: 752 LEANITEVLNKIRDETGKVCMRELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGR 811
Query: 2342 RAPNGFIDRSLPHFPRKSKVPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTAD 2163
RAPNGFIDRSLPHF R SK PAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDTAVKTA+
Sbjct: 812 RAPNGFIDRSLPHFHRGSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTAE 871
Query: 2162 TGYMSRRLIKALEDLSIQYDNTVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLM 1983
TGYMSRRLIKALEDLSI YDNT RNA GCIVQF+YGDDGMDPA+MEGKSG PLNFDRLLM
Sbjct: 872 TGYMSRRLIKALEDLSIHYDNTCRNASGCIVQFIYGDDGMDPASMEGKSGFPLNFDRLLM 931
Query: 1982 KVKATCPVARHRYLSPQQISEMVEKQLAGYGMHLKESCSEAFLNSLGKFFQGRRDKLEKK 1803
KVKATCP +YL I +M+E+Q+ + CSEAF SL F +G++++L++
Sbjct: 932 KVKATCPPVDQKYLPADAIPQMLEEQVVKHDP--DGVCSEAFKKSLKGFLEGQKNELKRV 989
Query: 1802 IKFVEDFDGDEKSEILEKVAHKTSGITEKQLEVFMETCFSRYRLKXXXXXXXXXXXXXXX 1623
++ V + +KSEILE V+HK GIT++QLEVF+ C RYR K
Sbjct: 990 MQLVS--NSAQKSEILEDVSHKICGITDRQLEVFIRICIGRYRSKVIEAGTAIGAIGAQS 1047
Query: 1622 XGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELEYNDNENAARV 1443
GEPGTQMTLKTFHFAGVASMNITQGVPRIKEIIN AK+ISTPIITAELE++ N N AR+
Sbjct: 1048 IGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINAAKKISTPIITAELEFDSNVNVARM 1107
Query: 1442 VKSRIEKTVLGQVAKSIKVVMTSRLASIVITLDMETILDAHLGINADVVKESILQTPKIK 1263
VK RIEKTVLGQVAKSIK+VMTSRLAS+VI+LDME I DA L I+A+VVKESILQTPK+K
Sbjct: 1108 VKGRIEKTVLGQVAKSIKIVMTSRLASVVISLDMERIQDAQLHIDANVVKESILQTPKLK 1167
Query: 1262 LKQQHIKVLDFRKLEIFPPVDKNKIHFELHSLKNVLPMVIVKGIKTXXXXXXXXXXXXXX 1083
LK+QH+KVLD +KLE+ PP D+++IHFELHSLKN+LP+V+VKGIKT
Sbjct: 1168 LKEQHVKVLDVKKLEVVPPADRSRIHFELHSLKNLLPLVVVKGIKT-VERVVIAEKKKDN 1226
Query: 1082 XXXXXXXXXKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEIN 903
Y+L VEG GLQ VMG EGIDG KT SNH+ E+ Q LGIEAAR CII+EI
Sbjct: 1227 KSQNKEAKKLYQLFVEGMGLQTVMGVEGIDGRKTMSNHVMEMLQILGIEAARSCIINEIA 1286
Query: 902 ETMKAHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNAS 723
TM +HGMSIDIRHMMLL D+MTFRGEVLGITRFGIQKMDKS+LMLASFEKT DHLFNAS
Sbjct: 1287 ATMASHGMSIDIRHMMLLGDVMTFRGEVLGITRFGIQKMDKSILMLASFEKTGDHLFNAS 1346
Query: 722 VNGRDDRIEGVSECIIMGIPMPLGTGILKVRQRDAVPPMLRYGAPDPILS 573
VNGRDD+IEGV+ECIIMGIPM LGTGILKV QR P+L+YGA DP+LS
Sbjct: 1347 VNGRDDKIEGVTECIIMGIPMQLGTGILKVMQRVDPLPLLQYGA-DPVLS 1395
>XP_016740618.1 PREDICTED: DNA-directed RNA polymerase III subunit 1-like [Gossypium
hirsutum]
Length = 1398
Score = 2035 bits (5273), Expect = 0.0
Identities = 1021/1370 (74%), Positives = 1155/1370 (84%), Gaps = 2/1370 (0%)
Frame = -1
Query: 4676 EIMKAAEVQVFKGQYYSSNRVPIEGGLLDPRMGPANKSCTCATCHGGFSDCPGHYGYLTL 4497
EI KAAEVQV+KG YY PIEGGLLDPRMGP NKS CATC G F DCPGHYGYL L
Sbjct: 36 EIAKAAEVQVYKGVYYDLQSRPIEGGLLDPRMGPPNKSGKCATCDGSFGDCPGHYGYLPL 95
Query: 4496 ALPVYNIGYLSTILDVLKCICKSCSRLLLEEKLCKDYLKKMRNPKLEALRKNDLMKSIVK 4317
LPVYN+GYLSTILD+LKCICKSCSR+LL++KL KDYLKKMR PK E L+K ++MKS+VK
Sbjct: 96 VLPVYNVGYLSTILDILKCICKSCSRILLDDKLAKDYLKKMRAPKTEPLKKAEIMKSVVK 155
Query: 4316 KCSTMAS-KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTE-SLEEFASAIIHTKESKAA 4143
KC+ MA KAVKC RCGY+NG VKKA ++G+ HDRSKV + SLEE SAI HTKESK++
Sbjct: 156 KCTAMAGGKAVKCSRCGYLNGTVKKAPKMIGVFHDRSKVNDNSLEELKSAISHTKESKSS 215
Query: 4142 VNVATYILNPVKVLFLFKRITDEDCEVLYLSERPEKLIITSIAVPPIAIRPSVIMDSSQS 3963
+N ++ +LNPVKVL LFKR+TD DCE+LYLS+RPE IIT+IAVPP AIRPSV +D SQS
Sbjct: 216 INTSS-VLNPVKVLSLFKRMTDVDCELLYLSDRPEMFIITNIAVPPTAIRPSVPVDGSQS 274
Query: 3962 NENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQV 3783
NE DITERLKRIIQ N+SL+Q+LV++N+AF L GW+ LQV+VAQYINSDVRGVP MQ
Sbjct: 275 NEKDITERLKRIIQANSSLRQQLVDSNAAFHCLNGWDLLQVDVAQYINSDVRGVPTEMQP 334
Query: 3782 ARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGIPIRMARILTYPE 3603
ARPLSGF+QRLKGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEV IPI MARIL+YPE
Sbjct: 335 ARPLSGFLQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPIHMARILSYPE 394
Query: 3602 RVSHHNIEKLRQCIRNGPDKYPGARMVRYPDGTARVLYGKFRIRLADELKFGCIVDRHLE 3423
RVS HNIEKLRQC+RNGP KYPGA VRYPDG+AR+L G +R RLADELKFGCIVDRHLE
Sbjct: 395 RVSSHNIEKLRQCVRNGPSKYPGAVKVRYPDGSARLLIGDYRKRLADELKFGCIVDRHLE 454
Query: 3422 DGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA 3243
DGD+VLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMH+PQTEEA
Sbjct: 455 DGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHLPQTEEA 514
Query: 3242 RTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGM 3063
RTEAL+LMGVQNNLCTP NG++L+ASTQDFLTSSFLITR+DTFYDRA FSL+C YMGD M
Sbjct: 515 RTEALMLMGVQNNLCTPNNGDVLLASTQDFLTSSFLITRRDTFYDRATFSLICSYMGDAM 574
Query: 3062 DPVDLPTPAILKPVELWTGKQLFSVLVRPHANMRVYVNLAVKEKTYSNKLIRTEGDEEIR 2883
D +DLPTP +LKPVELWTGKQLF+VL+RPHA++RVY+NL VKE+ YS K+ + GD+EI
Sbjct: 575 DLIDLPTPTLLKPVELWTGKQLFNVLLRPHASVRVYLNLTVKERNYSRKIAKRIGDKEIE 634
Query: 2882 IETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHAASGCMNRLAKLS 2703
+ETMCPNDGFVY RNSELI GQLGKATLGNGNKDGLYS+LLRDY AHAA+ CMNRLAK+S
Sbjct: 635 VETMCPNDGFVYIRNSELICGQLGKATLGNGNKDGLYSILLRDYNAHAAATCMNRLAKMS 694
Query: 2702 ARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYDVCNVKIKEYNEGKLQLKPGCDAAQT 2523
ARWIGNHGFSIGIDDVQP K L+D KG +S NY C+ +I+ +NEGKLQLKPGCDAAQT
Sbjct: 695 ARWIGNHGFSIGIDDVQPGKRLNDAKGVTLSGNYKKCDEQIQMFNEGKLQLKPGCDAAQT 754
Query: 2522 LESVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGR 2343
LE+ IT++LN+IR++ GK CM L WRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGR
Sbjct: 755 LEANITEVLNKIRDETGKVCMRELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGR 814
Query: 2342 RAPNGFIDRSLPHFPRKSKVPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTAD 2163
RAPNGFIDRSLPHF R SK PAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDTAVKTA+
Sbjct: 815 RAPNGFIDRSLPHFHRGSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTAE 874
Query: 2162 TGYMSRRLIKALEDLSIQYDNTVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLM 1983
TGYMSRRLIKALEDLSI YDNT RNA GCIVQF+YGDDGMDPA+MEGKSG PLNFDRLLM
Sbjct: 875 TGYMSRRLIKALEDLSIHYDNTCRNASGCIVQFIYGDDGMDPASMEGKSGFPLNFDRLLM 934
Query: 1982 KVKATCPVARHRYLSPQQISEMVEKQLAGYGMHLKESCSEAFLNSLGKFFQGRRDKLEKK 1803
KVKATCP +YL I +M+E+Q+ + CSEAF SL F +G++++L++
Sbjct: 935 KVKATCPPVDQKYLPADAIPQMLEEQVVKHDP--DGVCSEAFKKSLKGFLEGQKNELKRV 992
Query: 1802 IKFVEDFDGDEKSEILEKVAHKTSGITEKQLEVFMETCFSRYRLKXXXXXXXXXXXXXXX 1623
++ V + +KSEILE V+HK GIT++QLEVF+ C RYR K
Sbjct: 993 MQLVS--NSAQKSEILEDVSHKICGITDRQLEVFIRICIGRYRSKVIEAGTAIGAIGAQS 1050
Query: 1622 XGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELEYNDNENAARV 1443
GEPGTQMTLKTFHFAGVASMNITQGVPRIKEIIN AK+ISTPIITAELE++ N N AR+
Sbjct: 1051 IGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINAAKKISTPIITAELEFDSNVNIARM 1110
Query: 1442 VKSRIEKTVLGQVAKSIKVVMTSRLASIVITLDMETILDAHLGINADVVKESILQTPKIK 1263
VK RIEKTVLGQVAKSIK+VMTSRLAS+VI+LDME I DA L I+A+VVKESILQTPK+K
Sbjct: 1111 VKGRIEKTVLGQVAKSIKIVMTSRLASVVISLDMERIQDAQLHIDANVVKESILQTPKLK 1170
Query: 1262 LKQQHIKVLDFRKLEIFPPVDKNKIHFELHSLKNVLPMVIVKGIKTXXXXXXXXXXXXXX 1083
LK+QH+KVLD +KLE+ PP D+ +IHFELHSLKN+LP+V+VKGIKT
Sbjct: 1171 LKEQHVKVLDVKKLEVVPPADRRRIHFELHSLKNLLPLVVVKGIKT-VERVVIAEKKKDN 1229
Query: 1082 XXXXXXXXXKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEIN 903
Y+L VEG GLQ VMG EGIDG KT SNH+ E+ Q LGI AAR CII+EI
Sbjct: 1230 TSQNKEAKKLYQLFVEGMGLQTVMGVEGIDGRKTMSNHVMEMLQILGIAAARSCIINEIA 1289
Query: 902 ETMKAHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNAS 723
TM +HGMSIDIRHMMLL D+MTFRGEVLGITRFGIQKMDKS+LMLASFEKT DHLFNAS
Sbjct: 1290 ATMASHGMSIDIRHMMLLGDVMTFRGEVLGITRFGIQKMDKSILMLASFEKTGDHLFNAS 1349
Query: 722 VNGRDDRIEGVSECIIMGIPMPLGTGILKVRQRDAVPPMLRYGAPDPILS 573
VNGRDD+IEGV+ECIIMGIPM LGTGILKV QR P+L+YGA DP+LS
Sbjct: 1350 VNGRDDKIEGVTECIIMGIPMQLGTGILKVMQRVDPLPLLQYGA-DPVLS 1398
>OMO67575.1 RNA polymerase, alpha subunit [Corchorus capsularis]
Length = 1397
Score = 2029 bits (5256), Expect = 0.0
Identities = 1024/1371 (74%), Positives = 1165/1371 (84%), Gaps = 3/1371 (0%)
Frame = -1
Query: 4676 EIMKAAEVQVFKGQYYSSNRVPIEGGLLDPRMGPANKSCT-CATCHGGFSDCPGHYGYLT 4500
EI KAAEVQ++ YY +N I GGLLDPRMGPANKS CATC F DCPGHYGYL
Sbjct: 36 EIAKAAEVQIYGDAYYDANNRAIVGGLLDPRMGPANKSSPDCATCGAKFVDCPGHYGYLP 95
Query: 4499 LALPVYNIGYLSTILDVLKCICKSCSRLLLEEKLCKDYLKKMRNPKLEALRKNDLMKSIV 4320
LALPVYN+GYLSTILD+LKCICKSCSR+LL+EKLC+++LK+MRN K+EAL+K ++MKSIV
Sbjct: 96 LALPVYNVGYLSTILDILKCICKSCSRILLDEKLCRNFLKRMRNSKIEALKKVEIMKSIV 155
Query: 4319 KKCSTMAS-KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTE-SLEEFASAIIHTKESKA 4146
KKC+ MA KAVKC +CG +NG VKKA +LGI+HDRSK+ + SLEEF SAI HTKE KA
Sbjct: 156 KKCTAMAGGKAVKCRKCGLVNGTVKKAGMMLGILHDRSKINDDSLEEFRSAISHTKECKA 215
Query: 4145 AVNVATYILNPVKVLFLFKRITDEDCEVLYLSERPEKLIITSIAVPPIAIRPSVIMDSSQ 3966
+ N+ATY+LNPV VL LFKR+TD DCE+LYLS+RPEKLIIT++AVPPIAIRPSVI++ S
Sbjct: 216 SFNIATYVLNPVTVLSLFKRMTDVDCELLYLSDRPEKLIITNVAVPPIAIRPSVIVEGS- 274
Query: 3965 SNENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQ 3786
SNENDIT+RLK+II+TNA L+QELVE N AF+ L GWE LQVEVAQYINSDVRGVPFSMQ
Sbjct: 275 SNENDITQRLKKIIETNARLRQELVETNVAFRCLGGWEMLQVEVAQYINSDVRGVPFSMQ 334
Query: 3785 VARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGIPIRMARILTYP 3606
++PL+GFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEV IPI MARIL+YP
Sbjct: 335 ASKPLTGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILSYP 394
Query: 3605 ERVSHHNIEKLRQCIRNGPDKYPGARMVRYPDGTARVLYGKFRIRLADELKFGCIVDRHL 3426
ERVS+HNIEKLRQC+RNG KYPGA V++PD +++VL G +R R+ADEL+ G IV RHL
Sbjct: 395 ERVSNHNIEKLRQCVRNGYYKYPGATAVKFPDNSSKVLTGNYRKRIADELQVGAIVHRHL 454
Query: 3425 EDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEE 3246
EDGD+VLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEE
Sbjct: 455 EDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEE 514
Query: 3245 ARTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDG 3066
ARTEA++LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSL+CCYMGD
Sbjct: 515 ARTEAIMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLICCYMGDA 574
Query: 3065 MDPVDLPTPAILKPVELWTGKQLFSVLVRPHANMRVYVNLAVKEKTYSNKLIRTEGDEEI 2886
MD +DLPTP I+KP+ELWTGKQL VL+RPHA++RV++NL VKE+ YS K+++T GD EI
Sbjct: 575 MDLIDLPTPTIVKPIELWTGKQLIGVLLRPHASVRVFLNLTVKERNYSKKIVKTIGDTEI 634
Query: 2885 RIETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHAASGCMNRLAKL 2706
+ETMCPNDGFVY RNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHAA+ CMNRLAKL
Sbjct: 635 EVETMCPNDGFVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHAAATCMNRLAKL 694
Query: 2705 SARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYDVCNVKIKEYNEGKLQLKPGCDAAQ 2526
SARWIGNHGFSIGIDDVQP K L+D+K I+ +Y C+ +I+ +NEGKLQLKPGCDAAQ
Sbjct: 695 SARWIGNHGFSIGIDDVQPGKRLNDEKAVTIAGDYKKCDEEIQMFNEGKLQLKPGCDAAQ 754
Query: 2525 TLESVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGG 2346
TLE+ I+DILN+IR+ GK CM L WRNSPLIMSQCGSKGS INISQM+ACVGQQSVGG
Sbjct: 755 TLEANISDILNKIRDKTGKVCMKELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGG 814
Query: 2345 RRAPNGFIDRSLPHFPRKSKVPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTA 2166
RRAPNGFIDRSLPHF R SK PAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDTAVKTA
Sbjct: 815 RRAPNGFIDRSLPHFHRGSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTA 874
Query: 2165 DTGYMSRRLIKALEDLSIQYDNTVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLL 1986
+TGYMSRRL+K+LEDLS+ YDNTVRNA GCIVQF+YGDDGMDPA MEGK G PLNF+RLL
Sbjct: 875 ETGYMSRRLMKSLEDLSVHYDNTVRNASGCIVQFIYGDDGMDPAYMEGKDGFPLNFERLL 934
Query: 1985 MKVKATCPVARHRYLSPQQISEMVEKQLAGYGMHLKESCSEAFLNSLGKFFQGRRDKLEK 1806
MKVKATCP +YLS I MVE+QL + CS+AF SL F + + ++L++
Sbjct: 935 MKVKATCPPIEQKYLSADDIPRMVEEQLDKHDP--SGICSQAFKKSLKGFLERQTNELKR 992
Query: 1805 KIKFVEDFDGDEKSEILEKVAHKTSGITEKQLEVFMETCFSRYRLKXXXXXXXXXXXXXX 1626
+ V + +K+EIL+KV HK SGIT++QLEVF+ TC S+YR K
Sbjct: 993 VMGLVGNC--AQKNEILDKVIHKMSGITDRQLEVFVGTCISKYRSKVIEAGTAIGAMGAQ 1050
Query: 1625 XXGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELEYNDNENAAR 1446
GEPGTQMTLKTFHFAGVASMNITQGVPRIKEIIN AK+ISTPIITAELE+ +N N AR
Sbjct: 1051 SIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINAAKKISTPIITAELEFGNNVNIAR 1110
Query: 1445 VVKSRIEKTVLGQVAKSIKVVMTSRLASIVITLDMETILDAHLGINADVVKESILQTPKI 1266
+VK RIEKT+LGQVAKSIK+VMTSRLAS+VITLDME I DA L I+A+ VKESILQTPKI
Sbjct: 1111 MVKGRIEKTILGQVAKSIKIVMTSRLASVVITLDMERIQDAQLYIDANTVKESILQTPKI 1170
Query: 1265 KLKQQHIKVLDFRKLEIFPPVDKNKIHFELHSLKNVLPMVIVKGIKTXXXXXXXXXXXXX 1086
KLK+QH+KVLD RKL++ PP D++KIHF+LHSLKNVLP+V+VKGIKT
Sbjct: 1171 KLKEQHVKVLDVRKLQVVPPGDRSKIHFDLHSLKNVLPLVVVKGIKT---VERAVIAEKK 1227
Query: 1085 XXXXXXXXXXKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEI 906
Y LLVEG GL+AVMG EGI+G KT SNH+ E++Q LGIEAAR CIIDEI
Sbjct: 1228 NDKQKDQKEKLYHLLVEGMGLRAVMGIEGINGRKTFSNHVMEMEQILGIEAARTCIIDEI 1287
Query: 905 NETMKAHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNA 726
+TM +HGMSIDIRHMMLLAD+MTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLF A
Sbjct: 1288 AQTMASHGMSIDIRHMMLLADVMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFGA 1347
Query: 725 SVNGRDDRIEGVSECIIMGIPMPLGTGILKVRQRDAVPPMLRYGAPDPILS 573
+VNGR D+IEGVSECIIMGIPM +GTGIL+VRQR P+L+YG PDPIL+
Sbjct: 1348 AVNGRVDKIEGVSECIIMGIPMQIGTGILRVRQRVDPLPLLKYG-PDPILA 1397
>OMO91373.1 RNA polymerase, alpha subunit [Corchorus olitorius]
Length = 1382
Score = 2021 bits (5235), Expect = 0.0
Identities = 1015/1353 (75%), Positives = 1157/1353 (85%), Gaps = 3/1353 (0%)
Frame = -1
Query: 4676 EIMKAAEVQVFKGQYYSSNRVPIEGGLLDPRMGPANKSCT-CATCHGGFSDCPGHYGYLT 4500
EI KAAEVQ++ YY +N IEGGLLDPRMGPANKS CATC F DCPGHYGYL
Sbjct: 37 EIAKAAEVQIYHQGYYDANNRAIEGGLLDPRMGPANKSSPDCATCGAKFVDCPGHYGYLH 96
Query: 4499 LALPVYNIGYLSTILDVLKCICKSCSRLLLEEKLCKDYLKKMRNPKLEALRKNDLMKSIV 4320
LALPVYN+GYLSTILD+LKCICKSCSR+LL+EKLC+D+LK+MRNPK+EAL+K ++MKSIV
Sbjct: 97 LALPVYNVGYLSTILDILKCICKSCSRILLDEKLCRDFLKRMRNPKIEALKKVEIMKSIV 156
Query: 4319 KKCSTMAS-KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTE-SLEEFASAIIHTKESKA 4146
KKC+ MA KAVKC +CG++NG VKKA +LGI+HDRSK+ + SLEEF SAI HTKE KA
Sbjct: 157 KKCTAMAGGKAVKCRKCGFVNGTVKKAGMMLGILHDRSKINDDSLEEFRSAISHTKECKA 216
Query: 4145 AVNVATYILNPVKVLFLFKRITDEDCEVLYLSERPEKLIITSIAVPPIAIRPSVIMDSSQ 3966
+ ++ATY+LNPV VL LF+R+TD DCE+LYLS+RPEKLIIT++AVPPIAIRPSVI+D S
Sbjct: 217 SFSIATYVLNPVTVLSLFRRMTDVDCELLYLSDRPEKLIITNVAVPPIAIRPSVIVDGS- 275
Query: 3965 SNENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQ 3786
SNEND T++L+ II TNASL+QELVE N+AF+ L WETLQVEVAQYINSDVRGVPFSMQ
Sbjct: 276 SNENDATQKLRTIITTNASLRQELVETNAAFRCLGTWETLQVEVAQYINSDVRGVPFSMQ 335
Query: 3785 VARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGIPIRMARILTYP 3606
++PL+GFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEV IPI MARIL+YP
Sbjct: 336 ASKPLNGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILSYP 395
Query: 3605 ERVSHHNIEKLRQCIRNGPDKYPGARMVRYPDGTARVLYGKFRIRLADELKFGCIVDRHL 3426
ERVS+HNIEKLRQC+RNG KYPGA V++PD +++VL G +R R+ADEL+ G IV RHL
Sbjct: 396 ERVSNHNIEKLRQCVRNGYYKYPGATAVKFPDNSSKVLTGNYRKRIADELQVGAIVHRHL 455
Query: 3425 EDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEE 3246
EDGD+VLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEE
Sbjct: 456 EDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEE 515
Query: 3245 ARTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDG 3066
ARTEA++LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSL+CCYMGD
Sbjct: 516 ARTEAIMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLICCYMGDA 575
Query: 3065 MDPVDLPTPAILKPVELWTGKQLFSVLVRPHANMRVYVNLAVKEKTYSNKLIRTEGDEEI 2886
MD +DLPTP I+KP+ELWTGKQL VL+RP+A++RV++NL VKE+ YS K+++T GD EI
Sbjct: 576 MDLIDLPTPTIVKPIELWTGKQLLGVLLRPNASVRVFLNLTVKERNYSKKIVKTIGDTEI 635
Query: 2885 RIETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHAASGCMNRLAKL 2706
+ETMCPNDGFVY RNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHAA+ CMNRLAKL
Sbjct: 636 EVETMCPNDGFVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHAAAACMNRLAKL 695
Query: 2705 SARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYDVCNVKIKEYNEGKLQLKPGCDAAQ 2526
SARWIGNHGFSIGIDDVQP K L+D+K I+ +Y C+ +I+ +NEGKLQLKPGCDAAQ
Sbjct: 696 SARWIGNHGFSIGIDDVQPGKRLNDEKAVTIAGDYKKCDEEIEMFNEGKLQLKPGCDAAQ 755
Query: 2525 TLESVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGG 2346
TLE+ I+DILN+IR+ GK CM L WRNSPLIMSQCGSKGS INISQM+ACVGQQSVGG
Sbjct: 756 TLEANISDILNKIRDKTGKVCMKELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGG 815
Query: 2345 RRAPNGFIDRSLPHFPRKSKVPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTA 2166
RRAPNGFIDRSLPHF R SK PAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDTAVKTA
Sbjct: 816 RRAPNGFIDRSLPHFHRGSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTA 875
Query: 2165 DTGYMSRRLIKALEDLSIQYDNTVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLL 1986
+TGYMSRRL+K+LEDLS+ YDNTVRNA GCIVQF+YGDDGMDPA MEGKSG PLNF+RLL
Sbjct: 876 ETGYMSRRLMKSLEDLSVHYDNTVRNASGCIVQFIYGDDGMDPAYMEGKSGFPLNFERLL 935
Query: 1985 MKVKATCPVARHRYLSPQQISEMVEKQLAGYGMHLKESCSEAFLNSLGKFFQGRRDKLEK 1806
MKVKATCP H+YLS I MVE+QL + CS+AF SL F + + ++L++
Sbjct: 936 MKVKATCPPVEHKYLSADDIPRMVEEQLDKHDP--AGICSQAFKKSLKGFLERQTNELKR 993
Query: 1805 KIKFVEDFDGDEKSEILEKVAHKTSGITEKQLEVFMETCFSRYRLKXXXXXXXXXXXXXX 1626
+ V + +K+EIL+KV HK SGIT++QLEVF+ TC S+YR K
Sbjct: 994 VMGLVGNC--AQKNEILDKVIHKMSGITDRQLEVFVGTCISKYRSKVIEAGTAIGAMGAQ 1051
Query: 1625 XXGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELEYNDNENAAR 1446
GEPGTQMTLKTFHFAGVASMNITQGVPRIKEIIN AK+ISTPIITAELE+ +N N AR
Sbjct: 1052 SIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINAAKKISTPIITAELEFGNNVNIAR 1111
Query: 1445 VVKSRIEKTVLGQVAKSIKVVMTSRLASIVITLDMETILDAHLGINADVVKESILQTPKI 1266
+VK RIEKT+LGQVAKSIK+VMTSRLAS+VITLDME I DA L I+A+ VKESILQTPKI
Sbjct: 1112 MVKGRIEKTILGQVAKSIKIVMTSRLASVVITLDMERIQDAQLYIDANAVKESILQTPKI 1171
Query: 1265 KLKQQHIKVLDFRKLEIFPPVDKNKIHFELHSLKNVLPMVIVKGIKTXXXXXXXXXXXXX 1086
KLK+QH+KVLD RKL++ PP D++KIHF+LHSLKN+LP+V+VKGIKT
Sbjct: 1172 KLKEQHVKVLDVRKLQVVPPGDRSKIHFDLHSLKNLLPLVVVKGIKT---VERAVIAEKK 1228
Query: 1085 XXXXXXXXXXKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEI 906
Y LLVEG GL+AVMG EGI+G KT SNH+ E++Q LGIEAAR CIIDEI
Sbjct: 1229 NDKQKDQKEKLYHLLVEGMGLRAVMGIEGINGRKTFSNHVMEMEQILGIEAARTCIIDEI 1288
Query: 905 NETMKAHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNA 726
+TM +HGMSIDIRHMMLLAD+MTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLF A
Sbjct: 1289 AQTMASHGMSIDIRHMMLLADVMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFGA 1348
Query: 725 SVNGRDDRIEGVSECIIMGIPMPLGTGILKVRQ 627
+VNGR D+IEGVSECIIMGIPMP+GTGILKV+Q
Sbjct: 1349 AVNGRVDKIEGVSECIIMGIPMPIGTGILKVKQ 1381
>XP_018805188.1 PREDICTED: DNA-directed RNA polymerase III subunit 1 [Juglans regia]
Length = 1399
Score = 2018 bits (5229), Expect = 0.0
Identities = 1029/1375 (74%), Positives = 1148/1375 (83%), Gaps = 7/1375 (0%)
Frame = -1
Query: 4676 EIMKAAEVQVFKGQYYSSNRVPIEGGLLDPRMGPANKSCTCATCHGGFSDCPGHYGYLTL 4497
EI K AEVQV+KGQYY + R PIEGGLLDPRMGPANK+C CATCHG F +CPGH+GYL L
Sbjct: 37 EISKLAEVQVYKGQYYDAKRNPIEGGLLDPRMGPANKNCICATCHGSFGNCPGHFGYLKL 96
Query: 4496 ALPVYNIGYLSTILDVLKCICKSCSRLLLEEKLCKDYLKKMRNPKLEALRKNDLMKSIVK 4317
A+PVYN+GY+STILD+LKCICKSC+ +LLEE L K+YLKKMR+PK+E L+K +LMK IVK
Sbjct: 97 AVPVYNVGYMSTILDILKCICKSCAHILLEENLRKEYLKKMRSPKIEPLKKTELMKVIVK 156
Query: 4316 KCSTMAS--KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTE-SLEEFASAIIHTKESKA 4146
KC+ + S KAVKC RCGY+N VK+A+++ GI+H+R K + S+EEF SAI HTKESK+
Sbjct: 157 KCNNLTSGNKAVKCSRCGYVNVSVKRAMSMPGILHERQKCNDGSVEEFRSAISHTKESKS 216
Query: 4145 AVNVATYILNPVKVLFLFKRITDEDCEVLYLSERPEKLIITSIAVPPIAIRPSVIMDSSQ 3966
NVATYILNPV+VL LFKR+ DEDCE+LYLS+RPEKLIIT+IAVPPI IRPSVIMD SQ
Sbjct: 217 PFNVATYILNPVQVLVLFKRMLDEDCELLYLSDRPEKLIITNIAVPPIPIRPSVIMDGSQ 276
Query: 3965 SNENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQ 3786
SNENDITERLK+IIQ NASL QEL+EA+SA K LAGW+ LQ+EVAQYINSDVR VPF+MQ
Sbjct: 277 SNENDITERLKKIIQANASLSQELLEASSASKCLAGWDILQLEVAQYINSDVR-VPFTMQ 335
Query: 3785 VARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGIPIRMARILTYP 3606
V++PL GFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEV IPI+MARILTYP
Sbjct: 336 VSKPLGGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIQMARILTYP 395
Query: 3605 ERVSHHNIEKLRQCIRNGPDKYPGARMVRYPDGTARVLYGKFRIRLADELKFGCIVDRHL 3426
E VSHHNIEKLRQC+ NGPDKYPGARM+ + DG+ R L+ R +LAD LK+G IV RHL
Sbjct: 396 ECVSHHNIEKLRQCVCNGPDKYPGARMLTHTDGSMRSLFPSVRRKLADALKYGEIVHRHL 455
Query: 3425 EDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEE 3246
EDGD+VLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEE
Sbjct: 456 EDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEE 515
Query: 3245 ARTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDG 3066
ARTEA++LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMC YM DG
Sbjct: 516 ARTEAVMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMMDG 575
Query: 3065 MDPVDLPTPAILKPVELWTGKQLFSVLVRPHANMRVYVNLAVKEKTYSNKLIRTEGDEEI 2886
MD VDLPTPAILKP+ELWTGKQLFSVLVRPH N+RV+VNL +KEK+Y + EG+ E+
Sbjct: 576 MDFVDLPTPAILKPIELWTGKQLFSVLVRPHTNVRVFVNLTLKEKSYMKP--KEEGEREM 633
Query: 2885 RIETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHAASGCMNRLAKL 2706
+ MCPNDGFVYFRNSEL+SGQLGKATLGNGNKDGL+S+LLRDY AHAA+ CMNRLAKL
Sbjct: 634 --DAMCPNDGFVYFRNSELLSGQLGKATLGNGNKDGLFSILLRDYKAHAAAACMNRLAKL 691
Query: 2705 SARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYDVCNVKIKEYNEGKLQLKPGCDAAQ 2526
SARWIGNHGF+IGIDDVQP K L+D++ + IS+ Y C+ KIK YNEG L + GCDAAQ
Sbjct: 692 SARWIGNHGFTIGIDDVQPSKYLNDRRQETISKGYQGCDEKIKLYNEGNLPPETGCDAAQ 751
Query: 2525 TLESVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGG 2346
TLE+ IT ILN IR++ GK CM L WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGG
Sbjct: 752 TLEAGITRILNNIRDETGKVCMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGG 811
Query: 2345 RRAPNGFIDRSLPHFPRKSKVPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTA 2166
RRAPNGFIDRSLPHFPRK+K PAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDTAVKTA
Sbjct: 812 RRAPNGFIDRSLPHFPRKAKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTA 871
Query: 2165 DTGYMSRRLIKALEDLSIQYDNTVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLL 1986
DTGYMSR+LIKALEDLSIQYDNTVRNA GCIVQF YGDDGMDPANME KSG PLNF+RL
Sbjct: 872 DTGYMSRKLIKALEDLSIQYDNTVRNASGCIVQFRYGDDGMDPANMEAKSGSPLNFERLF 931
Query: 1985 MKVKATCPVARHRYLSPQQISEMVEKQLAGYGMHLKESCSEAFLNSLGKFFQGRRDKLEK 1806
+K KATCP YLSP ++SE VE + + M + CS AF S F LEK
Sbjct: 932 LKAKATCPSGGTEYLSPSEVSERVESRFSEIDMTPEGGCSVAFKKSFKSFLDEYGKSLEK 991
Query: 1805 KI---KFVEDFDGDEKSEILEKVAHKTSGITEKQLEVFMETCFSRYRLKXXXXXXXXXXX 1635
+ K VE+ E SEI EK+ SGIT KQLEVF+ TC SRY LK
Sbjct: 992 TMDTFKSVENLAAKENSEIQEKIVKNISGITPKQLEVFLNTCISRYHLKKIEAGTAIGAI 1051
Query: 1634 XXXXXGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELEYNDNEN 1455
GEPGTQMTLKTFHFAGVASMN+T GVPRIKEI+NGAK+ISTPIITA L +DN N
Sbjct: 1052 GAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIMNGAKKISTPIITAALNCDDNVN 1111
Query: 1454 AARVVKSRIEKTVLGQVAKSIKVVMTSRLASIVITLDMETILDAHLGINADVVKESILQT 1275
AAR+V+ RIEKT LGQVAKSIK+VMTSR AS+V+ LDME I D L I+A++VKESI+QT
Sbjct: 1112 AARMVRGRIEKTNLGQVAKSIKLVMTSRSASLVVKLDMERIRDVQLCIDANIVKESIIQT 1171
Query: 1274 PKIKLKQQHIKVLDFRKLEIF-PPVDKNKIHFELHSLKNVLPMVIVKGIKTXXXXXXXXX 1098
PK+KLK +HIKVLD KLEI P DK+KIHF LHSLKN+LPMVIVKGIKT
Sbjct: 1172 PKLKLKHEHIKVLDVGKLEILSPETDKSKIHFHLHSLKNLLPMVIVKGIKT------VER 1225
Query: 1097 XXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICI 918
KY LLVEG GLQ VMG EGIDGCKT SNH+ EVQQTLGIEAAR CI
Sbjct: 1226 AIIKKEQNKKMKTIKYSLLVEGAGLQEVMGTEGIDGCKTTSNHVIEVQQTLGIEAARKCI 1285
Query: 917 IDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADH 738
I+EI TM++HGM+IDIRHMMLLADLMTFRGEVLGITRFGIQKMDKS+LMLASFEKTADH
Sbjct: 1286 IEEIKYTMESHGMNIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSILMLASFEKTADH 1345
Query: 737 LFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKVRQRDAVPPMLRYGAPDPILS 573
LFNAS+NGRDDRIEGVSE IIMGIPM +GTG+LKVRQR ++P L G PDPILS
Sbjct: 1346 LFNASINGRDDRIEGVSESIIMGIPMQIGTGMLKVRQRVSLPSELHCG-PDPILS 1399
>GAV71386.1 RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1_3
domain-containing protein/RNA_pol_Rpb1_1
domain-containing protein/RNA_pol_Rpb1_5
domain-containing protein/RNA_pol_Rpb1_4
domain-containing protein, partial [Cephalotus
follicularis]
Length = 1489
Score = 1998 bits (5177), Expect = 0.0
Identities = 1022/1373 (74%), Positives = 1142/1373 (83%), Gaps = 5/1373 (0%)
Frame = -1
Query: 4676 EIMKAAEVQVFKGQYYSSNRVPIEGGLLDPRMGPANKSCTCATCHGGFSDCPGHYGYLTL 4497
EI+KAAEV+V+KG YY SN PIEGGLLDPRMGP NK C TCHG CPGH+G+L L
Sbjct: 122 EILKAAEVEVYKGVYYDSNMKPIEGGLLDPRMGPPNKQGMCTTCHGDLQSCPGHFGFLAL 181
Query: 4496 ALPVYNIGYLSTILDVLKCICKSCSRLLLEEKLCKDYLKKMRNPKLEALRKNDLMKSIVK 4317
ALPVYN+GYLSTI+DVLKCICKSCSR+LLEEKLCKD L KMR+PK++ LRK +LMK++VK
Sbjct: 182 ALPVYNVGYLSTIVDVLKCICKSCSRILLEEKLCKDRLNKMRSPKMDPLRKMELMKNLVK 241
Query: 4316 KCSTMAS-KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTESL--EEFASAIIHTKESKA 4146
K S MAS KAVKC RCGYINGMVKKA ++ GI HDRSK+ ++ EE SAI HTKESK
Sbjct: 242 KFSQMASSKAVKCSRCGYINGMVKKAASMFGIFHDRSKINDTTITEELRSAISHTKESKT 301
Query: 4145 AVNVAT-YILNPVKVLFLFKRITDEDCEVLYLSERPEKLIITSIAVPPIAIRPSVIMDS- 3972
A NVA+ ++LNPV+VL LFKRI DEDCE+LYL +RPEKLIIT I VPP IRPS I++
Sbjct: 302 AFNVASSHLLNPVRVLSLFKRIPDEDCEMLYLYDRPEKLIITHITVPPTTIRPSTIVEGG 361
Query: 3971 SQSNENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFS 3792
SQSNE+DITERLK+IIQ NASL+QEL++A + F+ LAGW+ LQVEVAQYINS+VRGVPFS
Sbjct: 362 SQSNEDDITERLKQIIQANASLRQELLDAVTPFRCLAGWDMLQVEVAQYINSEVRGVPFS 421
Query: 3791 MQVARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGIPIRMARILT 3612
MQ +PL GFVQRLKGKQGRFR NLSGKR E+TGRTVISPDPNLKITEV IPI MA+ILT
Sbjct: 422 MQATKPLRGFVQRLKGKQGRFRSNLSGKRSEFTGRTVISPDPNLKITEVAIPIHMAQILT 481
Query: 3611 YPERVSHHNIEKLRQCIRNGPDKYPGARMVRYPDGTARVLYGKFRIRLADELKFGCIVDR 3432
YPERVS HNIEKLRQC+RNGP KYPGARMV +G +RVL+G++R +A+ELKFG IV R
Sbjct: 482 YPERVSAHNIEKLRQCVRNGPFKYPGARMVIDVNGVSRVLHGQYRKHIAEELKFGVIVHR 541
Query: 3431 HLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQT 3252
HLEDGD VLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQT
Sbjct: 542 HLEDGDAVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQT 601
Query: 3251 EEARTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMG 3072
EEARTEAL+LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRA+FSLMC YMG
Sbjct: 602 EEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRASFSLMCSYMG 661
Query: 3071 DGMDPVDLPTPAILKPVELWTGKQLFSVLVRPHANMRVYVNLAVKEKTYSNKLIRTEGDE 2892
D MD VDLPTPAILKP+ELWTGKQLFSVLVRP+ ++RVY+NLA KE +YSN + R G E
Sbjct: 662 DAMDRVDLPTPAILKPIELWTGKQLFSVLVRPNISVRVYLNLATKESSYSN-IKRKVGGE 720
Query: 2891 EIRIETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHAASGCMNRLA 2712
E IETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYS+LLRDY AHAA+ CMNRLA
Sbjct: 721 EREIETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSILLRDYKAHAAAACMNRLA 780
Query: 2711 KLSARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYDVCNVKIKEYNEGKLQLKPGCDA 2532
KLSARWIGNHGFSIGIDDV P K+L+ KK IS++Y C+ KI++YNEGKL ++ G DA
Sbjct: 781 KLSARWIGNHGFSIGIDDVLPDKKLNKKKESTISDDYKECDKKIQDYNEGKLAVRTGSDA 840
Query: 2531 AQTLESVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSV 2352
A+TLE IT ILN IR+ K CM L WRNSPLIMSQCGSKGS INI QMVACVGQQSV
Sbjct: 841 AETLEIEITGILNNIRDKISKVCMSGLSWRNSPLIMSQCGSKGSSINICQMVACVGQQSV 900
Query: 2351 GGRRAPNGFIDRSLPHFPRKSKVPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVK 2172
GGRRAPNGFIDRSLPHF R SK PAA GFVANSFYSGL+ATEFFFHTMGGREGLVDTAVK
Sbjct: 901 GGRRAPNGFIDRSLPHFHRNSKTPAANGFVANSFYSGLTATEFFFHTMGGREGLVDTAVK 960
Query: 2171 TADTGYMSRRLIKALEDLSIQYDNTVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDR 1992
TADTGYMSR+L+KALEDLSI YD+TVRNA GCIVQFLYGDDGMDPA+MEGK G PLNF+R
Sbjct: 961 TADTGYMSRKLMKALEDLSIHYDDTVRNASGCIVQFLYGDDGMDPAHMEGKGGVPLNFNR 1020
Query: 1991 LLMKVKATCPVARHRYLSPQQISEMVEKQLAGYGMHLKESCSEAFLNSLGKFFQGRRDKL 1812
L MKVKATCP +YL P+ IS+MVE+ LA + + L SEAF SL F + ++L
Sbjct: 1021 LFMKVKATCPPGDSKYLYPEDISKMVEELLAKHDITLAGGYSEAFKKSLRDFIKKHDEQL 1080
Query: 1811 EKKIKFVEDFDGDEKSEILEKVAHKTSGITEKQLEVFMETCFSRYRLKXXXXXXXXXXXX 1632
K+K V+DF G E+S++ + HK GITEKQLEVF+ TC +RYRLK
Sbjct: 1081 GGKMKTVKDFVGGEESKVSTDLVHKLYGITEKQLEVFVNTCINRYRLKKIDAGTAIGSIG 1140
Query: 1631 XXXXGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELEYNDNENA 1452
GEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAK+ISTPIITA L+ + +ENA
Sbjct: 1141 AQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKKISTPIITAVLDQDGSENA 1200
Query: 1451 ARVVKSRIEKTVLGQVAKSIKVVMTSRLASIVITLDMETILDAHLGINADVVKESILQTP 1272
AR+VK RIEKTVLGQVAKSIK VMTSR ASIVITLDM+ + DA L INAD VKESILQ P
Sbjct: 1201 ARMVKGRIEKTVLGQVAKSIKTVMTSRFASIVITLDMKVVEDACLCINADTVKESILQAP 1260
Query: 1271 KIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELHSLKNVLPMVIVKGIKTXXXXXXXXXXX 1092
++KLK +HI+VL+ +KLE+ P D+NKIHFELHSLK+VL MV+VKGI T
Sbjct: 1261 RLKLKPEHIRVLERKKLEVIPQADRNKIHFELHSLKSVLAMVVVKGINT---VNRTVIAE 1317
Query: 1091 XXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIID 912
K++L VEG GLQAVMG EG+DGCKT SNH EVQQTLGIEAAR CIID
Sbjct: 1318 KKEQNGEVEKKPKWQLYVEGMGLQAVMGTEGVDGCKTTSNHFIEVQQTLGIEAARKCIID 1377
Query: 911 EINETMKAHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLF 732
EI TM++HGM IDIRHMMLLAD+MTFRGE+LGITRFGI+KMDKSVLMLASFE TADHLF
Sbjct: 1378 EIKHTMESHGMKIDIRHMMLLADVMTFRGEILGITRFGIKKMDKSVLMLASFENTADHLF 1437
Query: 731 NASVNGRDDRIEGVSECIIMGIPMPLGTGILKVRQRDAVPPMLRYGAPDPILS 573
NASVNG+DDRIEGVSE IIMG PM GTG LKV QR +PP+L YG PDPILS
Sbjct: 1438 NASVNGKDDRIEGVSESIIMGTPMQFGTGALKVIQRVDLPPVLTYG-PDPILS 1489
>XP_002284657.1 PREDICTED: DNA-directed RNA polymerase III subunit 1 [Vitis vinifera]
Length = 1383
Score = 1970 bits (5103), Expect = 0.0
Identities = 1016/1375 (73%), Positives = 1141/1375 (82%), Gaps = 7/1375 (0%)
Frame = -1
Query: 4676 EIMKAAEVQVFKGQYYSSNRVPIEGGLLDPRMGPANKSCTCATCHGGFSDCPGHYGYLTL 4497
EI KAAEVQV++G YY +NR PIE GLLDPRMGPANK+ TCATC G F DCPGH GYLTL
Sbjct: 33 EISKAAEVQVWRGVYYDANRKPIENGLLDPRMGPANKNGTCATCLGNFRDCPGHCGYLTL 92
Query: 4496 ALPVYNIGYLSTILDVLKCICKSCSRLLLEEKLCKDYLKKMRNPKLEALRKNDLMKSIVK 4317
ALPVYN+GYLSTI+D+LKCICKSCSR+LL+EK KDYLKKMR+ K+EAL+K +LMK IV+
Sbjct: 93 ALPVYNVGYLSTIVDILKCICKSCSRVLLDEKASKDYLKKMRSQKMEALKKAELMKKIVQ 152
Query: 4316 KCSTMAS--KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTE-SLEEFASAIIHTKESKA 4146
KC+ MAS KAVKC RCGY+NG+VKKAV+VLGIIHDRSK+ + SLEE +SAI HTKESKA
Sbjct: 153 KCTAMASSKKAVKCSRCGYMNGIVKKAVSVLGIIHDRSKIADGSLEECSSAISHTKESKA 212
Query: 4145 AVNVATYILNPVKVLFLFKRITDEDCEVLYLSERPEKLIITSIAVPPIAIRPSVIMDS-S 3969
+ +V ILNPVKVL LFKR+ DEDC++L L+ERPEKL++T+I VPPIAIRPSV MD +
Sbjct: 213 SFSVVD-ILNPVKVLSLFKRMMDEDCDLLNLAERPEKLVLTNIGVPPIAIRPSVFMDGGT 271
Query: 3968 QSNENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSM 3789
QSNEND+TERLKRIIQ NASL QEL + S K LAGW+ LQ+EVAQYINSDVRGVP +M
Sbjct: 272 QSNENDVTERLKRIIQANASLHQELQDTGSTSKCLAGWDYLQIEVAQYINSDVRGVPLAM 331
Query: 3788 QVARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGIPIRMARILTY 3609
Q ARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEV IPI MA+IL+Y
Sbjct: 332 QAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKILSY 391
Query: 3608 PERVSHHNIEKLRQCIRNGPDKYPGARMVRYPDGTARVLYGKFRIRLADELKFGCIVDRH 3429
PERVSHHNIEKLRQCI NGP KYPGA+++RYPDG+ R L R R ADELK+G IV+RH
Sbjct: 392 PERVSHHNIEKLRQCILNGPFKYPGAKLIRYPDGSMRSLMFSGRKRFADELKYGYIVERH 451
Query: 3428 LEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE 3249
LEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE
Sbjct: 452 LEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE 511
Query: 3248 EARTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGD 3069
EARTEAL+LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMC YMGD
Sbjct: 512 EARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGD 571
Query: 3068 GMDPVDLPTPAILKPVELWTGKQLFSVLVRPHANMRVYVNLAVKEKTYSNKLIRTEGDEE 2889
GMD VDLPTPAI+KPVELWTGKQLF+VL+RPHAN+RVY+NL V EKTY+ + +
Sbjct: 572 GMDLVDLPTPAIIKPVELWTGKQLFNVLLRPHANVRVYLNLTVMEKTYNKRRGK------ 625
Query: 2888 IRIETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHAASGCMNRLAK 2709
ETMCP+DGFVYFRNSELISGQLGKATLGNGNKDGL+SVLLRDY AHAA+ CMNRLAK
Sbjct: 626 ---ETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNAHAAAACMNRLAK 682
Query: 2708 LSARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYDVCNVKIKEYNEGKLQLKPGCDAA 2529
LSARWIGNHGFSIGIDDVQP L+D+K K I E Y+ C+ I++YN+GKL+L+PGC+AA
Sbjct: 683 LSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCHELIQQYNKGKLKLQPGCNAA 742
Query: 2528 QTLESVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVG 2349
QTLE+ IT +LN+IRE CM L WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVG
Sbjct: 743 QTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVG 802
Query: 2348 GRRAPNGFIDRSLPHFPRKSKVPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKT 2169
GRRAP+GFIDR+LPHFPRKSK P AKGFVA+SFY+GL+ATEFFFHTMGGREGLVDTAVKT
Sbjct: 803 GRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTATEFFFHTMGGREGLVDTAVKT 862
Query: 2168 ADTGYMSRRLIKALEDLSIQYDNTVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRL 1989
ADTGYMSRRL+KALEDLSIQYD TVRNA G IVQFLYGDDGMDPA MEGK G PLNF+RL
Sbjct: 863 ADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDDGMDPARMEGKDGFPLNFNRL 922
Query: 1988 LMKVKATCPVARHRYLSPQQISEMVEKQLAGYGMHLKESCSEAFLNSLGKFFQGRRDKLE 1809
+KVKATCP + LS QI E V K+L + E CS+AF +L F + ++K +
Sbjct: 923 FLKVKATCPAGENASLSALQIEETV-KRLKEHNTS-AEGCSDAFKTNLSGFLEECKEKFK 980
Query: 1808 ---KKIKFVEDFDGDEKSEILEKVAHKTSGITEKQLEVFMETCFSRYRLKXXXXXXXXXX 1638
+ + + G+E +I EK A SGIT KQL+VF++TC SRY+LK
Sbjct: 981 NTREALGLHGEHVGEENLDIQEKFAKNISGITSKQLQVFLDTCISRYQLKRIEAGTAIGA 1040
Query: 1637 XXXXXXGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELEYNDNE 1458
GEPGTQMTLKTFHFAGVASMN+T GVPRIKEIINGAKRISTPIITA LE N+N
Sbjct: 1041 IGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITAALECNNNV 1100
Query: 1457 NAARVVKSRIEKTVLGQVAKSIKVVMTSRLASIVITLDMETILDAHLGINADVVKESILQ 1278
AR+VK RIE+T LGQVAKSIK+V+TSRLA I + LDME I + L I++++V+ESIL+
Sbjct: 1101 KTARMVKGRIERTTLGQVAKSIKIVLTSRLALIAVALDMEGIQASQLSIDSNIVRESILR 1160
Query: 1277 TPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELHSLKNVLPMVIVKGIKTXXXXXXXXX 1098
+IKLKQQHIKVLD KLE+ P D++ IHFELH+LKN+LP V+VKGI+T
Sbjct: 1161 NRRIKLKQQHIKVLDAGKLEVHPQGDRSTIHFELHALKNLLPTVVVKGIET--------- 1211
Query: 1097 XXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICI 918
KY LLVEGTGLQ VMG EG+ G +T SNHI EVQQTLGIEAAR CI
Sbjct: 1212 --VERAVINKDNKVKYNLLVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTLGIEAARKCI 1269
Query: 917 IDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADH 738
I+EI TM +HGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADH
Sbjct: 1270 INEIQYTMASHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADH 1329
Query: 737 LFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKVRQRDAVPPMLRYGAPDPILS 573
LFNASV+GRDD+IEGVSECIIMGIPM LGTGILKVRQR P L YG DPI+S
Sbjct: 1330 LFNASVSGRDDKIEGVSECIIMGIPMQLGTGILKVRQRLQQVPELSYGL-DPIIS 1383
>XP_015582490.1 PREDICTED: DNA-directed RNA polymerase III subunit 1 [Ricinus
communis]
Length = 1434
Score = 1961 bits (5079), Expect = 0.0
Identities = 1007/1383 (72%), Positives = 1133/1383 (81%), Gaps = 15/1383 (1%)
Frame = -1
Query: 4676 EIMKAAEVQVFKGQYYSSNRVPIEGGLLDPRMGPANK-SCTCATCHGGFSDCPGHYGYLT 4500
EI+KAAE QV G YY S R PI+ GLLDPR+GPA K S C TC F +CPGH+GYL
Sbjct: 60 EILKAAECQVHLGSYYDSTRKPIQAGLLDPRLGPATKQSSACETCGADFHECPGHFGYLN 119
Query: 4499 LALPVYNIGYLSTILDVLKCICKSCSRLLLEEKLCKDYLKKMRNPKLEALRKNDLMKSIV 4320
L LPV+N+GY+S ILD+LKCICKSCSR+L +EKLCK LKKMRNP++E LRK++L+K IV
Sbjct: 120 LVLPVFNVGYMSNILDILKCICKSCSRILYDEKLCKADLKKMRNPRIEHLRKSELVKKIV 179
Query: 4319 KKCSTMAS-KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTES-LEEFASAIIHTKESKA 4146
KKCS+M S KAVKC RCG +NGMVKKA +VL IIHDR+K+ + LEE SAI HTKES+A
Sbjct: 180 KKCSSMTSNKAVKCTRCGDMNGMVKKAGSVLSIIHDRAKLVDGYLEECRSAIAHTKESRA 239
Query: 4145 AVNVATYILNPVKVLFLFKRITDEDCEVLYLSERPEKLIITSIAVPPIAIRPSVIMDSSQ 3966
+++ATYIL PVKVL LFKRI +EDCEVL L +RPEKLIIT+IAVPPI+IRPSV D Q
Sbjct: 240 PISLATYILTPVKVLSLFKRIPEEDCEVLGLYDRPEKLIITNIAVPPISIRPSVFTDGLQ 299
Query: 3965 SNENDITERLKRIIQTNASLQQELVEAN-SAFKSLAGWETLQVEVAQYINSDVRGVPFSM 3789
SNENDITERLK+IIQ NASL+ EL+E S K L W+ LQ VA Y+NSDVR VP ++
Sbjct: 300 SNENDITERLKQIIQANASLRMELLEGRMSVNKYLDSWDGLQAAVALYMNSDVR-VPNNV 358
Query: 3788 QVARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGIPIRMARILTY 3609
+V +PLSGFVQRLKGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEV IPI MARIL+Y
Sbjct: 359 EVGKPLSGFVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPIHMARILSY 418
Query: 3608 PERVSHHNIEKLRQCIRNGPDKYPGARMVRYPDGTARVLYGKFRIRLADELKFGCIVDRH 3429
PERVSHHNIEKLRQ + NGP KYPGA VRYPDG+++ L G +R +A+EL FGCIVDRH
Sbjct: 419 PERVSHHNIEKLRQLVSNGPQKYPGASTVRYPDGSSKRLIGSYRKTIAEELTFGCIVDRH 478
Query: 3428 LEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE 3249
LEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE
Sbjct: 479 LEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE 538
Query: 3248 EARTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGD 3069
EARTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITR+DTFYDRAAFSLMC YM D
Sbjct: 539 EARTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRAAFSLMCSYMND 598
Query: 3068 GMDPVDLPTPAILKPVELWTGKQLFSVLVRPHANMRVYVNLAVKEKTYSNKLIRTEGDEE 2889
GMD +DLPTPAILKP+ELWTGKQLFSVL+RP+AN+RVYVNL V+EK YS +GD+
Sbjct: 599 GMDLIDLPTPAILKPIELWTGKQLFSVLLRPNANVRVYVNLIVREKIYSKP---KKGDKR 655
Query: 2888 IRIETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHAASGCMNRLAK 2709
+ ETMCPNDGFVY RNSELISGQLGKATLGNGNKDGLYS+LLRDY HAA+ CMNRLAK
Sbjct: 656 EK-ETMCPNDGFVYIRNSELISGQLGKATLGNGNKDGLYSILLRDYNPHAAATCMNRLAK 714
Query: 2708 LSARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYDVCNVKIKEYNEGKLQLKPGCDAA 2529
LSARWIGNHGFSIGIDDVQP K+L D KGK IS Y C+ I++YNEGKL LKPGCDA
Sbjct: 715 LSARWIGNHGFSIGIDDVQPGKKLIDGKGKTISNGYQQCDKLIEQYNEGKLLLKPGCDAT 774
Query: 2528 QTLESVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVG 2349
QTLES IT+ LN++RE+AG CM L WRNSPLIMSQCGSKGS INISQMVACVGQQSVG
Sbjct: 775 QTLESEITEKLNKLREEAGDVCMKELHWRNSPLIMSQCGSKGSVINISQMVACVGQQSVG 834
Query: 2348 GRRAPNGFIDRSLPHFPRKSKVPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKT 2169
GRRAP+GFIDRSLPHFPRKSK PAAKGFVANSFYSGL ATEFFFHTM GREGLVDTAVKT
Sbjct: 835 GRRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYSGLMATEFFFHTMAGREGLVDTAVKT 894
Query: 2168 ADTGYMSRRLIKALEDLSIQYDNTVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRL 1989
ADTGYMSRRLIK LEDLSIQYDNTVRNA GCIVQFLYGDDG+DPA+MEGK G PLN DRL
Sbjct: 895 ADTGYMSRRLIKGLEDLSIQYDNTVRNASGCIVQFLYGDDGLDPASMEGKGGVPLNLDRL 954
Query: 1988 LMKVKATCPVARHRYLSPQQISEMVEKQLAGYGMHLKESCSEAFLNSLGKFFQGRRDKLE 1809
KVKATCPV YLSP IS++VE L + M L CSEAF SL F +LE
Sbjct: 955 FSKVKATCPVREEDYLSPLDISDVVENLLLKHDMALGGICSEAFKKSLTSFLGSHAKRLE 1014
Query: 1808 KKIKF---VEDFDGDE--------KSEILEKVAHKTSGITEKQLEVFMETCFSRYRLKXX 1662
+K VED + S+I+E++AHK G++E+Q+EVF++TC +RY K
Sbjct: 1015 SMMKLADGVEDPTSENIQTGGIRGNSKIIERLAHKIFGVSERQIEVFVKTCINRYLWKRV 1074
Query: 1661 XXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITA 1482
GEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAK+ISTPIITA
Sbjct: 1075 EPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKKISTPIITA 1134
Query: 1481 ELEYNDNENAARVVKSRIEKTVLGQVAKSIKVVMTSRLASIVITLDMETILDAHLGINAD 1302
ELE N N AAR+ K RI+KTVLGQVAKSIK+VMTSR AS+VITLDM+TI +A L ++A+
Sbjct: 1135 ELEQNTNVTAARIAKGRIQKTVLGQVAKSIKIVMTSRSASVVITLDMKTIQNAQLSLDAN 1194
Query: 1301 VVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELHSLKNVLPMVIVKGIKTX 1122
+VKE+IL+TP+IKLK QHIKVLD RKLE+ P D+ ++HFELH+LKN+LP +IV+GIKT
Sbjct: 1195 IVKEAILRTPRIKLKPQHIKVLDTRKLEVIPLGDRERVHFELHNLKNLLPSIIVQGIKT- 1253
Query: 1121 XXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLG 942
Y +LVEG GL VMG EG+DGCKT SNH+ EVQ+ LG
Sbjct: 1254 -VERAVIAQKKHDGKANDQELPTYNMLVEGMGLDLVMGTEGVDGCKTTSNHVMEVQKFLG 1312
Query: 941 IEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLA 762
IEAAR CIIDEIN+TM+ HGMSIDIRHMMLL DLMTF+GEVLGITRFGIQKMDKSVLMLA
Sbjct: 1313 IEAARKCIIDEINQTMEHHGMSIDIRHMMLLGDLMTFKGEVLGITRFGIQKMDKSVLMLA 1372
Query: 761 SFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKVRQRDAVPPMLRYGAPDP 582
SFEKTADHL++A+V GRDD+IEGVSECIIMGIPM +GTGILKV+QR PP+L YG+ D
Sbjct: 1373 SFEKTADHLYHAAVFGRDDKIEGVSECIIMGIPMQIGTGILKVQQRVDPPPVLNYGS-DS 1431
Query: 581 ILS 573
I+S
Sbjct: 1432 IIS 1434
>OAY24253.1 hypothetical protein MANES_17G000400 [Manihot esculenta]
Length = 1412
Score = 1958 bits (5072), Expect = 0.0
Identities = 1002/1384 (72%), Positives = 1131/1384 (81%), Gaps = 16/1384 (1%)
Frame = -1
Query: 4676 EIMKAAEVQVFKGQYYSSNRVPIEGGLLDPRMGPANKSCTCATCHGGFSDCPGHYGYLTL 4497
EI+KAAE QV G YY SNR P++ GLLD MGPANK+ TC TC GF +CPGH+GYL L
Sbjct: 39 EIIKAAECQVHLGVYYDSNRKPVQAGLLDTHMGPANKNSTCQTCGAGFHECPGHFGYLNL 98
Query: 4496 ALPVYNIGYLSTILDVLKCICKSCSRLLLEEKLCKDYLKKMRNPKLEALRKNDLMKSIVK 4317
LPV+N+GY+S ILD+LKCICKSCS +LL +KL K+ L+KMRNPK++ LRK+DLMK +VK
Sbjct: 99 VLPVFNVGYISNILDILKCICKSCSHILLGDKLYKEQLRKMRNPKIDPLRKSDLMKMMVK 158
Query: 4316 KCSTMAS-KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTES-LEEFASAIIHTKESKAA 4143
KCSTM S KAVKC RCG +NGMVKKA + L IIHDR K+ + ++E SAI HTKE +A
Sbjct: 159 KCSTMVSNKAVKCTRCGEMNGMVKKAGSALSIIHDRGKIIDGYVDECKSAISHTKEYRAP 218
Query: 4142 VNVATYILNPVKVLFLFKRITDEDCEVLYLSERPEKLIITSIAVPPIAIRPSVIMDSSQS 3963
++ ATYILNP +VL LF+RI++EDCEVL L++RPEKLIIT++AVPPI IRPSVIMD SQS
Sbjct: 219 ISPATYILNPARVLSLFERISEEDCEVLGLADRPEKLIITNVAVPPIPIRPSVIMDGSQS 278
Query: 3962 NENDITERLKRIIQTNASLQQELVEANSAF-KSLAGWETLQVEVAQYINSDVRGVPFSMQ 3786
NEND+TERLK+IIQ NASL+ EL+E + K L W+ LQ VA Y+NSDVR VP +++
Sbjct: 279 NENDLTERLKQIIQANASLRMELLEGRRSMNKYLDSWDGLQAAVALYVNSDVR-VPNNVE 337
Query: 3785 VARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGIPIRMARILTYP 3606
V +PLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEV IPI MARIL+YP
Sbjct: 338 VGKPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILSYP 397
Query: 3605 ERVSHHNIEKLRQCIRNGPDKYPGARMVRYPDGTARVLYGKFRIRLADELKFGCIVDRHL 3426
ERVSHHNIEKL+QC+ NGP KYPGARMVR+PDG++ VL G +R R+A+ELK GCIVDRHL
Sbjct: 398 ERVSHHNIEKLKQCVSNGPHKYPGARMVRHPDGSSNVLTGTYRKRIAEELKVGCIVDRHL 457
Query: 3425 EDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEE 3246
EDGD+VLFNRQPSLHRMSIMCHRAR+MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEE
Sbjct: 458 EDGDIVLFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEE 517
Query: 3245 ARTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDG 3066
ARTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMC YM DG
Sbjct: 518 ARTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMNDG 577
Query: 3065 MDPVDLPTPAILKPVELWTGKQLFSVLVRPHANMRVYVNLAVKEKTYSNKLIRTEGDEEI 2886
MD VDLPTPAILKP+ELWTGKQLFSVL+RP AN+RV++NL VKEK YS +GD
Sbjct: 578 MDIVDLPTPAILKPIELWTGKQLFSVLLRPSANVRVFLNLIVKEKIYSKP---KKGDTRE 634
Query: 2885 RIETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHAASGCMNRLAKL 2706
+ ETMCPNDGFVY RNSELISGQLGKATLGNGNKDGLYSVLLRDY AHAA+ CMNRLAKL
Sbjct: 635 K-ETMCPNDGFVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYKAHAAATCMNRLAKL 693
Query: 2705 SARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYDVCNVKIKEYNEGKLQLKPGCDAAQ 2526
SAR+IGNHGFSIGIDDVQP K+L D+KGK IS Y C+ I+EYNEGKL LKPGCDA Q
Sbjct: 694 SARFIGNHGFSIGIDDVQPGKKLIDEKGKTISNGYQQCDKLIEEYNEGKLSLKPGCDAIQ 753
Query: 2525 TLESVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGG 2346
TLE+ IT+ LN++RE+AG CM L WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGG
Sbjct: 754 TLEAEITEKLNKLREEAGDVCMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGG 813
Query: 2345 RRAPNGFIDRSLPHFPRKSKVPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTA 2166
RRAP+GFIDRSLPHFP KSK P AKGFVANSFYSGL+ATEFFFHTMGGREGLVDTAVKTA
Sbjct: 814 RRAPDGFIDRSLPHFPIKSKTPGAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTA 873
Query: 2165 DTGYMSRRLIKALEDLSIQYDNTVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLL 1986
DTGYMSR+LIK LEDLSIQYDNTVRNA GCIVQFLYGDDG+DPA MEGK G PLN DRL
Sbjct: 874 DTGYMSRKLIKGLEDLSIQYDNTVRNASGCIVQFLYGDDGLDPAKMEGKGGFPLNLDRLF 933
Query: 1985 MKVKATCPVARHRYLSPQQISEMVEKQLAGYGMHLKESCSEAFLNSLGKFFQGRRDKLEK 1806
+KVKAT P YLSP IS MVE + Y L C+EAF SL F KLE
Sbjct: 934 IKVKATSPAVEGDYLSPSDISIMVENLIVKYDTALGSICTEAFKKSLRSFLGDHVKKLES 993
Query: 1805 KIKFV--------EDFD-----GDEKSEILEKVAHKTSGITEKQLEVFMETCFSRYRLKX 1665
+K V ED + GD K+ +EKVAHK GI+++QLEVF+ TC RY K
Sbjct: 994 MMKLVGGVEEESSEDIEVGAVRGDTKN--IEKVAHKIFGISKRQLEVFLRTCIDRYLWKR 1051
Query: 1664 XXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIIT 1485
GEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAK+ISTPIIT
Sbjct: 1052 VEPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKKISTPIIT 1111
Query: 1484 AELEYNDNENAARVVKSRIEKTVLGQVAKSIKVVMTSRLASIVITLDMETILDAHLGINA 1305
AELE N N NAAR+VKSRI+KT LGQVAKSIK+VMTSR AS+V++LDM+TI +A L ++A
Sbjct: 1112 AELENNTNVNAARIVKSRIQKTTLGQVAKSIKIVMTSRSASVVVSLDMQTIQEAQLSLDA 1171
Query: 1304 DVVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELHSLKNVLPMVIVKGIKT 1125
++VKESIL+TP+IK+K Q++KVLD RKLE+ PP D+ K+HFELH+LKN+LP ++VKGI T
Sbjct: 1172 NIVKESILRTPRIKIKPQNVKVLDIRKLEVIPPGDREKVHFELHALKNLLPRIVVKGIGT 1231
Query: 1124 XXXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTL 945
Y +LVEGTGLQ VMG EG+DG KT NH+ EV + L
Sbjct: 1232 --VERVVIAQKKHDGKATDRELPTYNMLVEGTGLQDVMGTEGVDGRKTTCNHVMEVHKYL 1289
Query: 944 GIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLML 765
GIEA+R CIIDEI M+ HGMSIDIRHMMLLADLMTF+GEVLGI RFGIQKM+KSVLML
Sbjct: 1290 GIEASRKCIIDEIKNVMEGHGMSIDIRHMMLLADLMTFKGEVLGINRFGIQKMEKSVLML 1349
Query: 764 ASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKVRQRDAVPPMLRYGAPD 585
ASFEKTADHLF+A+VNGRDD+IEGVSECIIMGIPM LGTGILKV+QR PML Y D
Sbjct: 1350 ASFEKTADHLFHAAVNGRDDKIEGVSECIIMGIPMQLGTGILKVQQRVNPLPMLNYRF-D 1408
Query: 584 PILS 573
PI+S
Sbjct: 1409 PIIS 1412
>XP_011005565.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Populus
euphratica]
Length = 1410
Score = 1957 bits (5070), Expect = 0.0
Identities = 998/1383 (72%), Positives = 1130/1383 (81%), Gaps = 15/1383 (1%)
Frame = -1
Query: 4676 EIMKAAEVQVFKGQYYSSNRVPIEGGLLDPRMGPANKSCTCATCHGGFSDCPGHYGYLTL 4497
+I+KA+E QV GQYY +N+ I GGLLD RMG NK TC TC G F+DCPGH+GYL L
Sbjct: 36 DILKASECQVHLGQYYDANKKAIVGGLLDTRMGAPNKHGTCQTCGGSFTDCPGHFGYLNL 95
Query: 4496 ALPVYNIGYLSTILDVLKCICKSCSRLLLEEKLCKDYLKKMRNPKLEALRKNDLMKSIVK 4317
LPVYN+GYLSTILD+LKCICKSCSR+L++EKL K YLK+MRNP+ E L+KN+LMK IVK
Sbjct: 96 VLPVYNVGYLSTILDILKCICKSCSRVLIDEKLRKSYLKRMRNPRTEPLKKNELMKEIVK 155
Query: 4316 KCSTMAS-KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTES-LEEFASAIIHTKESKAA 4143
KCS+MAS KAVKC RCGY+NGMVKKA +V+GIIHDRSK+++ LEE SAI HT+E++A
Sbjct: 156 KCSSMASSKAVKCLRCGYMNGMVKKAGSVVGIIHDRSKLSDGYLEECKSAIGHTREARAP 215
Query: 4142 VNVATYILNPVKVLFLFKRITDEDCEVLYLSERPEKLIITSIAVPPIAIRPSVIMDSSQS 3963
+ +ATYILNPV+VL LF+RI +EDCE+LYL RPEKLIIT+IAVPPI+IRPSV + SQS
Sbjct: 216 IGLATYILNPVRVLSLFQRIVEEDCELLYLQGRPEKLIITTIAVPPISIRPSVFTEGSQS 275
Query: 3962 NENDITERLKRIIQTNASLQQELVEAN-SAFKSLAGWETLQVEVAQYINSDVRGVPFSMQ 3786
NENDITERLK+IIQ NA L+ EL+E + K L GW+ LQ V YINSDVR +P MQ
Sbjct: 276 NENDITERLKQIIQFNAKLRLELLEGRRTGIKYLIGWDELQAVVTLYINSDVR-IPLDMQ 334
Query: 3785 VARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGIPIRMARILTYP 3606
V RPLSGFVQRL GKQGRFR NL+GKRVE+TGRTVISPDPNLKITEV IPI MARILTYP
Sbjct: 335 VGRPLSGFVQRLTGKQGRFRQNLAGKRVEFTGRTVISPDPNLKITEVAIPIHMARILTYP 394
Query: 3605 ERVSHHNIEKLRQCIRNGPDKYPGARMVRYPDGTARVLYGKFRIRLADELKFGCIVDRHL 3426
ERV+HHNIEKLR C+ NG KYPGARMV YPDG++++L G +R R+A+ELK GCIV RHL
Sbjct: 395 ERVTHHNIEKLRHCVNNGSYKYPGARMVTYPDGSSKMLTGNYRKRIAEELKSGCIVHRHL 454
Query: 3425 EDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEE 3246
EDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEE
Sbjct: 455 EDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEE 514
Query: 3245 ARTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDG 3066
ARTEA LLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMC YM DG
Sbjct: 515 ARTEAFLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMNDG 574
Query: 3065 MDPVDLPTPAILKPVELWTGKQLFSVLVRPHANMRVYVNLAVKEKTYSNKLIRTEGDEEI 2886
MD VDLPTP++LKP+ELWTGKQLFSVL+RPHAN+RVYVNL VKEK YS + + +
Sbjct: 575 MDLVDLPTPSVLKPIELWTGKQLFSVLLRPHANVRVYVNLIVKEKNYS----KPNKEHKK 630
Query: 2885 RIETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHAASGCMNRLAKL 2706
ETMCPNDG+VYFRNSELISGQLGKATLGNGNKDGLYS+LLRDY A+AA+ CMNRLAKL
Sbjct: 631 ERETMCPNDGYVYFRNSELISGQLGKATLGNGNKDGLYSILLRDYNAYAAATCMNRLAKL 690
Query: 2705 SARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYDVCNVKIKEYNEGKLQLKPGCDAAQ 2526
SARWIGNHGFSIGIDDVQP K+L D+KGK IS Y CN I +YN G+L LKPGCDA Q
Sbjct: 691 SARWIGNHGFSIGIDDVQPGKKLIDEKGKTISNGYQHCNKLIADYNGGRLTLKPGCDATQ 750
Query: 2525 TLESVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGG 2346
TLE+ IT+ LN++RE+AG CM L WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGG
Sbjct: 751 TLETEITERLNKLREEAGDVCMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGG 810
Query: 2345 RRAPNGFIDRSLPHFPRKSKVPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTA 2166
RAP+GFIDRSLPHFPRKSK PAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTA
Sbjct: 811 SRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTA 870
Query: 2165 DTGYMSRRLIKALEDLSIQYDNTVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLL 1986
DTGYM+RRL K LEDL +QYDNTV++AGG IVQFLYGDDG+DPA MEGK+G PLNFDRL
Sbjct: 871 DTGYMARRLSKGLEDLCVQYDNTVQDAGGGIVQFLYGDDGLDPAMMEGKAGVPLNFDRLF 930
Query: 1985 MKVKATCPVARHRYLSPQQISEMVEKQLAGYGMHLKESCSEAFLNSLGKFFQGRRDKLEK 1806
MKVKATC Y+SP IS +V+ L + L CSE+F SL F + +LE
Sbjct: 931 MKVKATCGAEEDEYISPSDISNIVQSLLLKHNGTLDGICSESFRKSLSSFLGDQAKRLEC 990
Query: 1805 KIKFVEDFDGDEKSEI------------LEKVAHKTSGITEKQLEVFMETCFSRYRLKXX 1662
+K V+ F+ + I EK+A K SGITEKQLEVF++TC RY K
Sbjct: 991 LMKLVDGFEVENFENIKNVEGLTGISKNTEKIAQKVSGITEKQLEVFLKTCLDRYVWKRI 1050
Query: 1661 XXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITA 1482
GEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIIT
Sbjct: 1051 EPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITV 1110
Query: 1481 ELEYNDNENAARVVKSRIEKTVLGQVAKSIKVVMTSRLASIVITLDMETILDAHLGINAD 1302
ELE+N N NAAR++K RI+KTVLGQVAKSIK+VMTSR AS+ +TLDM+TI +A L ++A+
Sbjct: 1111 ELEHNSNVNAARIIKGRIQKTVLGQVAKSIKIVMTSRSASVKVTLDMKTIREAQLSLDAN 1170
Query: 1301 VVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELHSLKNVLPMVIVKGIKTX 1122
+V+E IL+TPKIK K Q I VL+ KLE+FP D+NK+HFELHSLKN+LP V+VKGIKT
Sbjct: 1171 IVRELILETPKIKRKLQRINVLEDGKLEVFPGGDRNKLHFELHSLKNMLPAVVVKGIKT- 1229
Query: 1121 XXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLG 942
KY + VEGTGLQAVMG +G+DG KTKSNHI EVQ+TLG
Sbjct: 1230 -VERVVIAQKKLDDAENDQGGPKYNMFVEGTGLQAVMGTDGVDGRKTKSNHIIEVQETLG 1288
Query: 941 IEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLA 762
IEAAR CIIDEI TM++HGMSIDIRHMMLLAD+MT RG VLGITRFGIQKMDKSVLMLA
Sbjct: 1289 IEAARKCIIDEIKGTMESHGMSIDIRHMMLLADVMTSRGVVLGITRFGIQKMDKSVLMLA 1348
Query: 761 SFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKVRQRDAVPPMLRYGAPDP 582
SFEKT+DHLFNASV G+DD+IEGVSECIIMGIP+ +GTG+LK++QR PML YG DP
Sbjct: 1349 SFEKTSDHLFNASVKGKDDKIEGVSECIIMGIPVAIGTGVLKIQQRVDPLPMLDYGL-DP 1407
Query: 581 ILS 573
I+S
Sbjct: 1408 IIS 1410
>EEF30548.1 DNA-directed RNA polymerase III largest subunit, putative [Ricinus
communis]
Length = 1383
Score = 1949 bits (5049), Expect = 0.0
Identities = 1006/1386 (72%), Positives = 1132/1386 (81%), Gaps = 18/1386 (1%)
Frame = -1
Query: 4676 EIMKAAEVQVFKGQYYSSNRVPIEGGLLDPRMGPANK-SCTCATCHGGFSDCPGHYGYLT 4500
EI+KAAE QV G YY S R PI+ GLLDPR+GPA K S C TC F +CPGH+GYL
Sbjct: 6 EILKAAECQVHLGSYYDSTRKPIQAGLLDPRLGPATKQSSACETCGADFHECPGHFGYLN 65
Query: 4499 LALPVYNIGYLSTILDVLKCICKSCSRLLLEEKLCKDYLKKMRNPKLEALRKNDLMKSIV 4320
L LPV+N+GY+S ILD+LKCICKSCSR+L +EKLCK LKKMRNP++E LRK++L+K IV
Sbjct: 66 LVLPVFNVGYMSNILDILKCICKSCSRILYDEKLCKADLKKMRNPRIEHLRKSELVKKIV 125
Query: 4319 KKCSTMAS-KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTES-LEEFASAIIHTKESKA 4146
KKCS+M S KAVKC RCG +NGMVKKA +VL IIHDR+K+ + LEE SAI HTKES+A
Sbjct: 126 KKCSSMTSNKAVKCTRCGDMNGMVKKAGSVLSIIHDRAKLVDGYLEECRSAIAHTKESRA 185
Query: 4145 AVNVATYILNPVKVLFLFKRITDEDCEVLYLSERPEKLIITSIAVPPIAIRPSVIMDSSQ 3966
+++ATYIL PVKVL LFKRI +EDCEVL L +RPEKLIIT+IAVPPI+IRPSV D Q
Sbjct: 186 PISLATYILTPVKVLSLFKRIPEEDCEVLGLYDRPEKLIITNIAVPPISIRPSVFTDGLQ 245
Query: 3965 SNENDITERLKRIIQTNASLQQELVEAN-SAFKSLAGWETLQVEVAQYINSDVRGVPFSM 3789
SNENDITERLK+IIQ NASL+ EL+E S K L W+ LQ VA Y+NSDVR VP ++
Sbjct: 246 SNENDITERLKQIIQANASLRMELLEGRMSVNKYLDSWDGLQAAVALYMNSDVR-VPNNV 304
Query: 3788 QVARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGIPIRMARILTY 3609
+V +PLSGFVQRLKGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEV IPI MARIL+Y
Sbjct: 305 EVGKPLSGFVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPIHMARILSY 364
Query: 3608 PERVSHHNIEKLRQCIRNGPDKYPGARMVRYPDGTARVLYGKFRIRLADELKFGCIVDRH 3429
PERVSHHNIEKLRQ + NGP KYPGA VRYPDG+++ L G +R +A+EL FGCIVDRH
Sbjct: 365 PERVSHHNIEKLRQLVSNGPQKYPGASTVRYPDGSSKRLIGSYRKTIAEELTFGCIVDRH 424
Query: 3428 LEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE 3249
LEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE
Sbjct: 425 LEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE 484
Query: 3248 EARTEALLLMGV-QNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMG 3072
EARTEALLLMGV QNNLCTPKNGEILVASTQDFLTSSFLITR+DTFYDRAAFSLMC YM
Sbjct: 485 EARTEALLLMGVSQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRAAFSLMCSYMN 544
Query: 3071 DGMDPVDLPTPAILKPVELWTGKQLFSVLVRPHANMRVYVNLAVKEKTYSNKLIRTEGDE 2892
DGMD +DLPTPAILKP+ELWTGKQLFSVL+RP+AN+RVYVNL V+EK YS +GD+
Sbjct: 545 DGMDLIDLPTPAILKPIELWTGKQLFSVLLRPNANVRVYVNLIVREKIYSKP---KKGDK 601
Query: 2891 EIRIETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHAASGCMNRLA 2712
+ ETMCPNDGFVY RNSELISGQLGKATLGNGNKDGLYS+LLRDY HAA+ CMNRLA
Sbjct: 602 REK-ETMCPNDGFVYIRNSELISGQLGKATLGNGNKDGLYSILLRDYNPHAAATCMNRLA 660
Query: 2711 KLS--ARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYDVCNVKIKEYNEGKLQLKPGC 2538
KL ARWIGNHGFSIGIDDVQP K+L D KGK IS Y C+ I++YNEGKL LKPGC
Sbjct: 661 KLRQVARWIGNHGFSIGIDDVQPGKKLIDGKGKTISNGYQQCDKLIEQYNEGKLLLKPGC 720
Query: 2537 DAAQTLESVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQ 2358
DA QTLES IT+ LN++RE+AG CM L WRNSPLIMSQCGSKGS INISQMVACVGQQ
Sbjct: 721 DATQTLESEITEKLNKLREEAGDVCMKELHWRNSPLIMSQCGSKGSVINISQMVACVGQQ 780
Query: 2357 SVGGRRAPNGFIDRSLPHFPRKSKVPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTA 2178
SVGGRRAP+GFIDRSLPHFPRKSK PAAKGFVANSFYSGL ATEFFFHTM GREGLVDTA
Sbjct: 781 SVGGRRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYSGLMATEFFFHTMAGREGLVDTA 840
Query: 2177 VKTADTGYMSRRLIKALEDLSIQYDNTVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNF 1998
VKTADTGYMSRRLIK LEDLSIQYDNTVRNA GCIVQFLYGDDG+DPA+MEGK G PLN
Sbjct: 841 VKTADTGYMSRRLIKGLEDLSIQYDNTVRNASGCIVQFLYGDDGLDPASMEGKGGVPLNL 900
Query: 1997 DRLLMKVKATCPVARHRYLSPQQISEMVEKQLAGYGMHLKESCSEAFLNSLGKFFQGRRD 1818
DRL KVKATCPV YLSP IS++VE L + M L CSEAF SL F
Sbjct: 901 DRLFSKVKATCPVREEDYLSPLDISDVVENLLLKHDMALGGICSEAFKKSLTSFLGSHAK 960
Query: 1817 KLEKKIKF---VEDFDGDE--------KSEILEKVAHKTSGITEKQLEVFMETCFSRYRL 1671
+LE +K VED + S+I+E++AHK G++E+Q+EVF++TC +RY
Sbjct: 961 RLESMMKLADGVEDPTSENIQTGGIRGNSKIIERLAHKIFGVSERQIEVFVKTCINRYLW 1020
Query: 1670 KXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPI 1491
K GEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAK+ISTPI
Sbjct: 1021 KRVEPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKKISTPI 1080
Query: 1490 ITAELEYNDNENAARVVKSRIEKTVLGQVAKSIKVVMTSRLASIVITLDMETILDAHLGI 1311
ITAELE N N AAR+ K RI+KTVLGQVAKSIK+VMTSR AS+VITLDM+TI +A L +
Sbjct: 1081 ITAELEQNTNVTAARIAKGRIQKTVLGQVAKSIKIVMTSRSASVVITLDMKTIQNAQLSL 1140
Query: 1310 NADVVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELHSLKNVLPMVIVKGI 1131
+A++VKE+IL+TP+IKLK QHIKVLD RKLE+ P D+ ++HFELH+LKN+LP +IV+GI
Sbjct: 1141 DANIVKEAILRTPRIKLKPQHIKVLDTRKLEVIPLGDRERVHFELHNLKNLLPSIIVQGI 1200
Query: 1130 KTXXXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQ 951
KT Y +LVEG GL VMG EG+DGCKT SNH+ EVQ+
Sbjct: 1201 KT--VERAVIAQKKHDGKANDQELPTYNMLVEGMGLDLVMGTEGVDGCKTTSNHVMEVQK 1258
Query: 950 TLGIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVL 771
LGIEAAR CIIDEIN+TM+ HGMSIDIRHMMLL DLMTF+GEVLGITRFGIQKMDKSVL
Sbjct: 1259 FLGIEAARKCIIDEINQTMEHHGMSIDIRHMMLLGDLMTFKGEVLGITRFGIQKMDKSVL 1318
Query: 770 MLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKVRQRDAVPPMLRYGA 591
MLASFEKTADHL++A+V GRDD+IEGVSECIIMGIPM +GTGILKV+QR PP+L YG+
Sbjct: 1319 MLASFEKTADHLYHAAVFGRDDKIEGVSECIIMGIPMQIGTGILKVQQRVDPPPVLNYGS 1378
Query: 590 PDPILS 573
D I+S
Sbjct: 1379 -DSIIS 1383