BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00021577
         (2622 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006482225.1 PREDICTED: chloroplastic group IIA intron splicin...  1216   0.0  
XP_006430740.1 hypothetical protein CICLE_v10013368mg [Citrus cl...  1176   0.0  
KDO59071.1 hypothetical protein CISIN_1g041729mg [Citrus sinensis]   1051   0.0  
XP_017975887.1 PREDICTED: chloroplastic group IIA intron splicin...   879   0.0  
EOY04144.1 maize chloroplast splicing factor CRS1, putative isof...   873   0.0  
EOY04143.1 maize chloroplast splicing factor CRS1, putative isof...   873   0.0  
EOY04146.1 maize chloroplast splicing factor CRS1, putative isof...   866   0.0  
EOY04145.1 maize chloroplast splicing factor CRS1, putative isof...   866   0.0  
GAV85552.1 CRS1_YhbY domain-containing protein [Cephalotus folli...   863   0.0  
XP_010660411.1 PREDICTED: chloroplastic group IIA intron splicin...   865   0.0  
XP_019080763.1 PREDICTED: chloroplastic group IIA intron splicin...   857   0.0  
OMO80207.1 hypothetical protein CCACVL1_13100 [Corchorus capsula...   851   0.0  
XP_019080766.1 PREDICTED: chloroplastic group IIA intron splicin...   852   0.0  
OMP04744.1 hypothetical protein COLO4_09355 [Corchorus olitorius]     842   0.0  
EOY04147.1 maize chloroplast splicing factor CRS1, putative isof...   839   0.0  
XP_002516757.1 PREDICTED: chloroplastic group IIA intron splicin...   825   0.0  
XP_018805818.1 PREDICTED: chloroplastic group IIA intron splicin...   818   0.0  
XP_016696534.1 PREDICTED: chloroplastic group IIA intron splicin...   814   0.0  
KHG25518.1 hypothetical protein F383_03195 [Gossypium arboreum]       813   0.0  
XP_017627144.1 PREDICTED: chloroplastic group IIA intron splicin...   812   0.0  

>XP_006482225.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Citrus sinensis] XP_015387056.1 PREDICTED:
            chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Citrus sinensis] XP_015387057.1 PREDICTED:
            chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Citrus sinensis]
          Length = 771

 Score = 1216 bits (3146), Expect = 0.0
 Identities = 626/757 (82%), Positives = 665/757 (87%)
 Frame = -1

Query: 2523 VICSSVNTNQNTPKTFKITNPVIKLSPNAPVNKMPTAPWMRSPVVLQPDEIINPSKPKTK 2344
            VICSS N NQN+PKT K+  P IKLSPNAP+ KMPTAPWMRSP+VLQPDEII PSKPKTK
Sbjct: 24   VICSSSNPNQNSPKTLKL--PDIKLSPNAPIKKMPTAPWMRSPIVLQPDEIIKPSKPKTK 81

Query: 2343 KSFEKTDKGLTAKESGVRGKKAMKRIIQNIENLQKDQILNDSQKKDLEKFEFRGCFEENG 2164
            KSF+KTDKGLTAKESGVRGK+AMK+II+NIE LQKDQIL+++QKK +EKFEF+GCFEEN 
Sbjct: 82   KSFKKTDKGLTAKESGVRGKQAMKKIIENIEKLQKDQILDETQKKVMEKFEFKGCFEENV 141

Query: 2163 SGEVDLKGGFGGKVPWVREERFVFRRMKKERVVTKAEMKXXXXXXXXXXXXXXXXRKWVK 1984
            S E DL+GGFGGKVPW+RE+RFVFRRMKKER+VTKAE                  RKWVK
Sbjct: 142  SHEEDLRGGFGGKVPWLREDRFVFRRMKKERMVTKAETMLDGELLERLKDEARKMRKWVK 201

Query: 1983 VKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKDAHV 1804
            VKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKDAHV
Sbjct: 202  VKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKDAHV 261

Query: 1803 IYRGDSYRFASKFSVKLRPRFADGREKPFLKSTHLDLENKVNSSCIKSNTTTLDENMCLK 1624
            +YRGDS    SK SVK+ PR AD +E P  KSTHL LE KVN S IKSNT TLD+N  LK
Sbjct: 262  VYRGDS----SKSSVKMCPRSADDQEAPLSKSTHLHLEKKVNVSWIKSNTATLDQNRSLK 317

Query: 1623 VGEENSLPTSIFMDKIFRTKPIDRSLYEREGDRLLDGLGPRFVDWWMWKPLPVDADLLSE 1444
             GEENSLPTSIFMDK  R   ID+SLYEREGDRLLDGLGPRFVDWWMWKPLPVD DLL E
Sbjct: 318  DGEENSLPTSIFMDKNLR---IDKSLYEREGDRLLDGLGPRFVDWWMWKPLPVDGDLLPE 374

Query: 1443 VVPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQGLAAAILKLWEK 1264
            VVPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQGLA AILKLWEK
Sbjct: 375  VVPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQGLATAILKLWEK 434

Query: 1263 SLVAKIAVKWGIPNTDNEQMANELKRLTGGVLLLRNKFLIILYRGKDFLPCGVENLIVER 1084
            SLVAKI VKWGIPNTDNEQMANELK LTGGVLLLRNKFLIILYRG DFLPCGVENLIVER
Sbjct: 435  SLVAKITVKWGIPNTDNEQMANELKHLTGGVLLLRNKFLIILYRGNDFLPCGVENLIVER 494

Query: 1083 ERELQICQLHEEGARLKAIETFCLPDEPPEETSRAGTLSEFQDIQTEFGDLGMGNRXXXX 904
            ERELQICQ HEEGARLKAIETF LP EP E+TS+AGTLSEFQ+IQ++FGDL MGNR    
Sbjct: 495  ERELQICQNHEEGARLKAIETFHLPHEPLEKTSKAGTLSEFQNIQSDFGDLKMGNREFEL 554

Query: 903  XXXXXXXXXXXXLRKQERKLFILNIKIEKSAKELSKLNSAWKPSEQDPDLEMITEEERQC 724
                        LRKQERKLFILNIKIEKSAKELS+LNSAWKP EQDPDLEMITEEERQC
Sbjct: 555  QLEAEIEDLERELRKQERKLFILNIKIEKSAKELSRLNSAWKPREQDPDLEMITEEERQC 614

Query: 723  LRKIALKMNSNLLLGRRGVFDGVLEGLHQHWKHREVAKVITMQKLFAQVIFTAKSLVAES 544
            L KI +KMNSNLLLGRRGVFDGV+EGLHQHWK+REVA+VIT QKLFAQVI+TAKSLVAES
Sbjct: 615  LHKIGMKMNSNLLLGRRGVFDGVIEGLHQHWKYREVARVITKQKLFAQVIYTAKSLVAES 674

Query: 543  GGILISVDKLKEGHAIIIYRGKNYRRPSKLMTLNLLSKRQALKRSLEMQRLGSLKFFAYQ 364
            GGILISVDKLKEGHAIIIYRGKNYRRP KLMT NLLSKRQAL+RSLEMQRLGSLKFFAYQ
Sbjct: 675  GGILISVDKLKEGHAIIIYRGKNYRRPLKLMTQNLLSKRQALRRSLEMQRLGSLKFFAYQ 734

Query: 363  RQRAISDLKIKFAELQESRQKNMKISAQTDLQLSNTS 253
            RQR IS+LKIK AELQESRQKNMKI AQTD++ ++TS
Sbjct: 735  RQRVISNLKIKLAELQESRQKNMKIIAQTDVRHTDTS 771


>XP_006430740.1 hypothetical protein CICLE_v10013368mg [Citrus clementina] ESR43980.1
            hypothetical protein CICLE_v10013368mg [Citrus
            clementina]
          Length = 770

 Score = 1176 bits (3041), Expect = 0.0
 Identities = 614/770 (79%), Positives = 651/770 (84%), Gaps = 13/770 (1%)
 Frame = -1

Query: 2523 VICSSVNTNQNTPKTFKITNPVIKLSPNAPVNKMPTAPWMRSPVVLQPDEIINPSKPKTK 2344
            VICSS N NQN+PKT K+  P IKLSPNAP+ KMPTAPWMRSP+VLQPDEII PSKPKTK
Sbjct: 30   VICSSSNPNQNSPKTLKL--PDIKLSPNAPIKKMPTAPWMRSPIVLQPDEIIKPSKPKTK 87

Query: 2343 KSFEKTDKGLTAKESGVRGKKAMKRIIQNIENLQKDQILNDSQKKDLEKFEFRGCFEENG 2164
            KSF+KTDKGLTAKESGVRGK+AMK+II+NIE LQKDQIL+++QKKD+EKFEFRGCFEENG
Sbjct: 88   KSFKKTDKGLTAKESGVRGKQAMKKIIENIEKLQKDQILDETQKKDMEKFEFRGCFEENG 147

Query: 2163 SGEVDLKGGFGGKVPWVREERFVFRRMKKERVVTKAEMKXXXXXXXXXXXXXXXXRKWVK 1984
            S E DL+GGFGGKVPW+REERFVFRRMKKER+VTKAE                  RKWVK
Sbjct: 148  SDEEDLRGGFGGKVPWLREERFVFRRMKKERMVTKAETMLDGELIERLKDEARKMRKWVK 207

Query: 1983 VKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKDAHV 1804
            VKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKDAHV
Sbjct: 208  VKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKDAHV 267

Query: 1803 IYRGDSYRFASKFSVKLRPRFADGREKPFLKSTHLDLENKVNSSCIKSNTTTLDENMCLK 1624
            +YRGD     SK SVK+ PR AD +E P  KSTHL LE KVN S IKSNT TLD+N  LK
Sbjct: 268  VYRGDG----SKSSVKMCPRSADDQEAPLSKSTHLHLEKKVNVSWIKSNTATLDQNRSLK 323

Query: 1623 VGEENSLPTSIFMDKIFRTKPIDRSLYEREGDRLLDGLGPRFVDWWMWKPLPVDADLLSE 1444
             GEENSLPTSIFMDK  R   ID+SLYEREGDRLLDGLGPRFVDWWMWKPLPVD DLL E
Sbjct: 324  DGEENSLPTSIFMDKNLR---IDKSLYEREGDRLLDGLGPRFVDWWMWKPLPVDGDLLPE 380

Query: 1443 VVPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQGLAAAILKLWEK 1264
            VVPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQGLA AILKLWEK
Sbjct: 381  VVPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQGLATAILKLWEK 440

Query: 1263 SLVAKIAVKWGIPNTDNEQMANELKR-------------LTGGVLLLRNKFLIILYRGKD 1123
            SLVAKIAVKWGIPNTDNEQMANELK              LTGGVLLLRNKFLIILYRGKD
Sbjct: 441  SLVAKIAVKWGIPNTDNEQMANELKNFKFSDDGVLLMQHLTGGVLLLRNKFLIILYRGKD 500

Query: 1122 FLPCGVENLIVERERELQICQLHEEGARLKAIETFCLPDEPPEETSRAGTLSEFQDIQTE 943
            FLPCGVENLIVERERELQICQ HEEGARLKAIETF LPDEP E+TS+AGTLSEFQ+IQ++
Sbjct: 501  FLPCGVENLIVERERELQICQNHEEGARLKAIETFHLPDEPLEKTSKAGTLSEFQNIQSD 560

Query: 942  FGDLGMGNRXXXXXXXXXXXXXXXXLRKQERKLFILNIKIEKSAKELSKLNSAWKPSEQD 763
            FGDL MGNR                LRKQERKLFILNIKIEKSAKELS+LNSAWKP EQD
Sbjct: 561  FGDLKMGNREFELQLEAEIEDLERELRKQERKLFILNIKIEKSAKELSRLNSAWKPREQD 620

Query: 762  PDLEMITEEERQCLRKIALKMNSNLLLGRRGVFDGVLEGLHQHWKHREVAKVITMQKLFA 583
            PDLEMITEEERQCL KI +K+NSNLLLGRRGVFDGV+EGLHQHWK+REVA+VIT QKLFA
Sbjct: 621  PDLEMITEEERQCLHKIGMKINSNLLLGRRGVFDGVIEGLHQHWKYREVARVITKQKLFA 680

Query: 582  QVIFTAKSLVAESGGILISVDKLKEGHAIIIYRGKNYRRPSKLMTLNLLSKRQALKRSLE 403
            QVI+TAKSLVAESGGILISVDKLKEGHAIIIYRGKNYRRP KLMT NLLSKRQAL+RSLE
Sbjct: 681  QVIYTAKSLVAESGGILISVDKLKEGHAIIIYRGKNYRRPLKLMTQNLLSKRQALRRSLE 740

Query: 402  MQRLGSLKFFAYQRQRAISDLKIKFAELQESRQKNMKISAQTDLQLSNTS 253
            MQRLG                    AELQESRQKNMKI AQTD++ ++TS
Sbjct: 741  MQRLG--------------------AELQESRQKNMKIIAQTDVRHTDTS 770


>KDO59071.1 hypothetical protein CISIN_1g041729mg [Citrus sinensis]
          Length = 744

 Score = 1051 bits (2718), Expect = 0.0
 Identities = 550/705 (78%), Positives = 582/705 (82%), Gaps = 21/705 (2%)
 Frame = -1

Query: 2424 MPTAPWMRSPVVLQPDEIINPSKPKTKKSFEKTDKGLTAKESGVRGKKAMKRIIQNIENL 2245
            MPTAPWMRSP+VLQPDEII PSKPKTKKSF+KTDKGLTAKESGVRGK+AMK+II+NIE L
Sbjct: 1    MPTAPWMRSPIVLQPDEIIKPSKPKTKKSFKKTDKGLTAKESGVRGKQAMKKIIENIEKL 60

Query: 2244 QKDQILNDSQKKDLEKFEFRGCFEENGSGEVDLKGGFGGKVPWVREERFVFRRMKKERVV 2065
            QKDQIL+++QKK +EKFEF+GCFEEN S E DL+GGFGGKVPW+RE+RFVFRRMKKER+V
Sbjct: 61   QKDQILDETQKKVMEKFEFKGCFEENVSHEEDLRGGFGGKVPWLREDRFVFRRMKKERMV 120

Query: 2064 TKAEMKXXXXXXXXXXXXXXXXRKWVKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLC 1885
            TKAE                  RKWVKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLC
Sbjct: 121  TKAETMLDGELLERLKDEARKMRKWVKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLC 180

Query: 1884 RNMDRAREILELKTGGLVIWTKKDAHVIYRGDSYRFASKFSVKLRPRFADGREKPFLKST 1705
            RNMDRAREILELKTGGLVIWTKKDAHV+YRGD     SK SVK+ PR AD +E P  KST
Sbjct: 181  RNMDRAREILELKTGGLVIWTKKDAHVVYRGDG----SKSSVKMCPRSADDQEAPLSKST 236

Query: 1704 HLDLENKVNSSCIKSNTTTLDENMCLKVGEENSLPTSIFMDKIFRTKPIDRSLYEREGDR 1525
            HL LE KVN S IKSNT TLD+N  LK GEENSLPTSIFMDK  R   ID+SLYEREGDR
Sbjct: 237  HLHLEKKVNVSWIKSNTATLDQNRSLKDGEENSLPTSIFMDKNLR---IDKSLYEREGDR 293

Query: 1524 LLDGLGPRFVDWWMWKPLPVDADLLSEVVPGFKPPFRLSPPDARSKLTDDELTYLRKLAH 1345
            LLDGLGPRFVDWWMWKPLPVD DLL EVVPGFKPPFRLSPPDARSKLTDDELTYLRKLAH
Sbjct: 294  LLDGLGPRFVDWWMWKPLPVDGDLLPEVVPGFKPPFRLSPPDARSKLTDDELTYLRKLAH 353

Query: 1344 PLPTHFVLGRNRGLQGLAAAILKLWEKSLVAKIAVKWGIPNTDNEQMANELK-------- 1189
            PLPTHFVLGRNRGLQGLA AILKLWEKSLVAKI VKWGIPNTDNEQMANELK        
Sbjct: 354  PLPTHFVLGRNRGLQGLATAILKLWEKSLVAKITVKWGIPNTDNEQMANELKASLAKWKP 413

Query: 1188 -------------RLTGGVLLLRNKFLIILYRGKDFLPCGVENLIVERERELQICQLHEE 1048
                          LTGGVLLLRNKFLIILYRGKDFLPCGVENLIVERERELQICQ HEE
Sbjct: 414  NFKFSDDGVLLMQHLTGGVLLLRNKFLIILYRGKDFLPCGVENLIVERERELQICQNHEE 473

Query: 1047 GARLKAIETFCLPDEPPEETSRAGTLSEFQDIQTEFGDLGMGNRXXXXXXXXXXXXXXXX 868
            GARLKAIETF LPDEP E+TS+AGTLSEFQ+IQ++FGDL MGNR                
Sbjct: 474  GARLKAIETFHLPDEPLEKTSKAGTLSEFQNIQSDFGDLKMGNREFELQLEAEIEDLERE 533

Query: 867  LRKQERKLFILNIKIEKSAKELSKLNSAWKPSEQDPDLEMITEEERQCLRKIALKMNSNL 688
            LRKQERKL +                      EQDPDLEMITEEERQCL KI +K+NSNL
Sbjct: 534  LRKQERKLLL----------------------EQDPDLEMITEEERQCLHKIGMKINSNL 571

Query: 687  LLGRRGVFDGVLEGLHQHWKHREVAKVITMQKLFAQVIFTAKSLVAESGGILISVDKLKE 508
            LLGRRGVFDGV+EGLHQHWK+REVA+VIT QKLFAQVI+TAKSLVAESGGILISVDKLKE
Sbjct: 572  LLGRRGVFDGVIEGLHQHWKYREVARVITKQKLFAQVIYTAKSLVAESGGILISVDKLKE 631

Query: 507  GHAIIIYRGKNYRRPSKLMTLNLLSKRQALKRSLEMQRLGSLKFF 373
            GHAIIIYRGKNYRRP KLMT NLLSKRQAL+RSLEMQRLGSLKFF
Sbjct: 632  GHAIIIYRGKNYRRPLKLMTQNLLSKRQALRRSLEMQRLGSLKFF 676


>XP_017975887.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Theobroma cacao]
          Length = 792

 Score =  879 bits (2271), Expect = 0.0
 Identities = 462/749 (61%), Positives = 560/749 (74%), Gaps = 13/749 (1%)
 Frame = -1

Query: 2514 SSVNTNQNTPKTFKITNPV-------IKLSPNAPVNKMPTAPWMRSPVVLQPDEIINPSK 2356
            SS+N++QN  KT K    +       +   PN    KMPTAPWM+ P++LQP E++NPSK
Sbjct: 27   SSLNSSQNPSKTHKENRSLNNNSKFSVSKDPNNGPIKMPTAPWMKGPLLLQPHEVLNPSK 86

Query: 2355 PKTKKSFEKT----DKGLTAKESGVRGKKAMKRIIQNIENLQKDQILNDSQKKDLEKFEF 2188
              +KKS        DK L  KESGVRGKK MK+II+N+E LQ +++L D+Q    E+FE 
Sbjct: 87   STSKKSSNSKAKAPDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLEDTQIGIREEFEV 146

Query: 2187 RGCFEENGS-GEVDLKGGFGGKVPWVREE-RFVFRRMKKERVVTKAEMKXXXXXXXXXXX 2014
                EE GS GEV     F GK+PW+REE + VFRRMKKE+++T+AE+            
Sbjct: 147  GNWLEEFGSDGEVKR---FDGKMPWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRR 203

Query: 2013 XXXXXRKWVKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGL 1834
                 RKW+KV K GVT++VV EI+LAWR+NEL MVKF VPLCRNMDRAREI+E+KT GL
Sbjct: 204  KAMRMRKWIKVMKLGVTKAVVDEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGL 263

Query: 1833 VIWTKKDAHVIYRGDSYRFASKFSVKLRPRFADGREKPFLKSTHLDLENKVNSSCIKSNT 1654
            V+W KKDA V+YRG S+   SK S    PR ADG+E      +HL   N +N S  K N 
Sbjct: 264  VVWGKKDALVVYRGCSHGLTSKISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNG 323

Query: 1653 TTLDENMCLKVGEENSLPTSIFMDKIFRTKPIDRSLYEREGDRLLDGLGPRFVDWWMWKP 1474
            +TL   +  +  E+ S+P +IFM +    +P+  SLYERE DRLLDGLGPRF+DWWM KP
Sbjct: 324  STLQSGLYREDREKESMPINIFMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKP 383

Query: 1473 LPVDADLLSEVVPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQGL 1294
            LP+DADLL EVVPGF+PP RLSPP+ R  LTDDEL YLRKL HPLP HF LG+NR LQGL
Sbjct: 384  LPIDADLLPEVVPGFRPPLRLSPPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGL 443

Query: 1293 AAAILKLWEKSLVAKIAVKWGIPNTDNEQMANELKRLTGGVLLLRNKFLIILYRGKDFLP 1114
            AAAILKLWEKSL+AKIA+KWGI NTDNEQMA ELK LTGGVLL+RNKFL+ILYRGKDFLP
Sbjct: 444  AAAILKLWEKSLIAKIAIKWGIQNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLP 503

Query: 1113 CGVENLIVERERELQICQLHEEGARLKAIETFCLPDEPPEETSRAGTLSEFQDIQTEFGD 934
             GV NL+VERE  L+ CQL+EEGAR+K  ET  + DEP  +TS  GTLSEF+DIQ  FGD
Sbjct: 504  QGVANLVVEREMALRRCQLNEEGARVKVAETCQVADEPLAKTSTVGTLSEFEDIQARFGD 563

Query: 933  LGMGNRXXXXXXXXXXXXXXXXLRKQERKLFILNIKIEKSAKELSKLNSAWKPSEQDPDL 754
            L   +                 LR QERKL ILNIKIEKSAKEL+KL S+W+P+EQD DL
Sbjct: 564  LKKESSELELQLEAQKENLERELRNQERKLSILNIKIEKSAKELAKLKSSWQPAEQDVDL 623

Query: 753  EMITEEERQCLRKIALKMNSNLLLGRRGVFDGVLEGLHQHWKHREVAKVITMQKLFAQVI 574
            E+ITEEER+CLRKI LK+NS L+LGRRGVF+GV+EG++QHWKHREV KVITMQ++FA+VI
Sbjct: 624  EIITEEERECLRKIGLKLNSFLVLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVI 683

Query: 573  FTAKSLVAESGGILISVDKLKEGHAIIIYRGKNYRRPSKLMTLNLLSKRQALKRSLEMQR 394
            +TAK LVAE+GGIL+SV+KLKEGHA+IIYRGKNYRRP KLMT NLL+KR+AL++S+E+QR
Sbjct: 684  YTAKFLVAETGGILVSVEKLKEGHALIIYRGKNYRRPLKLMTNNLLTKREALRQSIELQR 743

Query: 393  LGSLKFFAYQRQRAISDLKIKFAELQESR 307
            +GSLKFFAYQR++AI DLK+K AEL++ R
Sbjct: 744  IGSLKFFAYQRRQAILDLKLKLAELKDRR 772


>EOY04144.1 maize chloroplast splicing factor CRS1, putative isoform 2 [Theobroma
            cacao]
          Length = 804

 Score =  873 bits (2256), Expect = 0.0
 Identities = 461/749 (61%), Positives = 559/749 (74%), Gaps = 13/749 (1%)
 Frame = -1

Query: 2514 SSVNTNQNTPKTFKITNPV-------IKLSPNAPVNKMPTAPWMRSPVVLQPDEIINPSK 2356
            SS+N++QN  KT K    +       +   PN    KMPTAPWM+ P++LQP E++NPSK
Sbjct: 53   SSLNSSQNPSKTHKENRSLNNNSKFSVSKDPNNGPIKMPTAPWMKGPLLLQPHEVLNPSK 112

Query: 2355 PKTKKSFEKT----DKGLTAKESGVRGKKAMKRIIQNIENLQKDQILNDSQKKDLEKFEF 2188
              +KKS        DK L  KESGVRGKK MK+II+N+E LQ +++L D+Q    E+FE 
Sbjct: 113  STSKKSSNSKAKAPDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLEDTQIGIREEFEV 172

Query: 2187 RGCFEENGS-GEVDLKGGFGGKVPWVREE-RFVFRRMKKERVVTKAEMKXXXXXXXXXXX 2014
                EE GS GEV     F GK+PW+REE + VFRRMKKE+++T+AE+            
Sbjct: 173  GNWLEEFGSDGEVKR---FDGKMPWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRR 229

Query: 2013 XXXXXRKWVKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGL 1834
                 RKW+KV K GVT++VV EI+LAWR+NEL MVKF VPLCRNMDRAREI+E+KT GL
Sbjct: 230  KAMRMRKWIKVMKLGVTKAVVDEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGL 289

Query: 1833 VIWTKKDAHVIYRGDSYRFASKFSVKLRPRFADGREKPFLKSTHLDLENKVNSSCIKSNT 1654
            V+W KKDA V+YRG S+   SK S    PR ADG+E      +HL   N +N S  K N 
Sbjct: 290  VVWGKKDALVVYRGCSHGLTSKISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNG 349

Query: 1653 TTLDENMCLKVGEENSLPTSIFMDKIFRTKPIDRSLYEREGDRLLDGLGPRFVDWWMWKP 1474
            +TL   +  +  E+ S+P +IFM +    +P+  SLYERE DRLLDGLGPRF+DWWM KP
Sbjct: 350  STLQSGLYREDREKESMPINIFMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKP 409

Query: 1473 LPVDADLLSEVVPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQGL 1294
            LP+DADLL E VPGF+PP RLSPP+ R  LTDDEL YLRKL HPLP HF LG+NR LQGL
Sbjct: 410  LPIDADLLPEEVPGFRPPLRLSPPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGL 469

Query: 1293 AAAILKLWEKSLVAKIAVKWGIPNTDNEQMANELKRLTGGVLLLRNKFLIILYRGKDFLP 1114
            AAAILKLWEKSL+AKIA+KWGI NTDNEQMA ELK LTGGVLL+RNKFL+ILYRGKDFLP
Sbjct: 470  AAAILKLWEKSLIAKIAIKWGIQNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLP 529

Query: 1113 CGVENLIVERERELQICQLHEEGARLKAIETFCLPDEPPEETSRAGTLSEFQDIQTEFGD 934
             GV NL+VERE  L+ CQL+EEGAR+K  ET  + DEP  +TS  GTLSEF+DIQT FGD
Sbjct: 530  QGVANLVVEREMALRRCQLNEEGARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGD 589

Query: 933  LGMGNRXXXXXXXXXXXXXXXXLRKQERKLFILNIKIEKSAKELSKLNSAWKPSEQDPDL 754
            L   +                 LR QERKL ILNIKIEKSAKEL+KL S+ +P+EQD DL
Sbjct: 590  LKKESSELELQLEAQKENLERELRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDL 649

Query: 753  EMITEEERQCLRKIALKMNSNLLLGRRGVFDGVLEGLHQHWKHREVAKVITMQKLFAQVI 574
            E+ITEEER+CLRKI LK+NS L+LGRRGVF+GV+EG++QHWKHREV KVITMQ++FA+VI
Sbjct: 650  EIITEEERECLRKIGLKLNSFLVLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVI 709

Query: 573  FTAKSLVAESGGILISVDKLKEGHAIIIYRGKNYRRPSKLMTLNLLSKRQALKRSLEMQR 394
            +TAK LVAE+GGIL+SV+KLKEGHA+IIYRGKNYRRP KLMT NLL+KR+AL++S+E+QR
Sbjct: 710  YTAKFLVAETGGILVSVEKLKEGHALIIYRGKNYRRPLKLMTNNLLTKREALRQSIELQR 769

Query: 393  LGSLKFFAYQRQRAISDLKIKFAELQESR 307
            +GSLKFFAYQR++AI DLK+K AEL++ R
Sbjct: 770  IGSLKFFAYQRRQAILDLKLKLAELKDRR 798


>EOY04143.1 maize chloroplast splicing factor CRS1, putative isoform 1 [Theobroma
            cacao]
          Length = 818

 Score =  873 bits (2256), Expect = 0.0
 Identities = 461/749 (61%), Positives = 559/749 (74%), Gaps = 13/749 (1%)
 Frame = -1

Query: 2514 SSVNTNQNTPKTFKITNPV-------IKLSPNAPVNKMPTAPWMRSPVVLQPDEIINPSK 2356
            SS+N++QN  KT K    +       +   PN    KMPTAPWM+ P++LQP E++NPSK
Sbjct: 53   SSLNSSQNPSKTHKENRSLNNNSKFSVSKDPNNGPIKMPTAPWMKGPLLLQPHEVLNPSK 112

Query: 2355 PKTKKSFEKT----DKGLTAKESGVRGKKAMKRIIQNIENLQKDQILNDSQKKDLEKFEF 2188
              +KKS        DK L  KESGVRGKK MK+II+N+E LQ +++L D+Q    E+FE 
Sbjct: 113  STSKKSSNSKAKAPDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLEDTQIGIREEFEV 172

Query: 2187 RGCFEENGS-GEVDLKGGFGGKVPWVREE-RFVFRRMKKERVVTKAEMKXXXXXXXXXXX 2014
                EE GS GEV     F GK+PW+REE + VFRRMKKE+++T+AE+            
Sbjct: 173  GNWLEEFGSDGEVKR---FDGKMPWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRR 229

Query: 2013 XXXXXRKWVKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGL 1834
                 RKW+KV K GVT++VV EI+LAWR+NEL MVKF VPLCRNMDRAREI+E+KT GL
Sbjct: 230  KAMRMRKWIKVMKLGVTKAVVDEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGL 289

Query: 1833 VIWTKKDAHVIYRGDSYRFASKFSVKLRPRFADGREKPFLKSTHLDLENKVNSSCIKSNT 1654
            V+W KKDA V+YRG S+   SK S    PR ADG+E      +HL   N +N S  K N 
Sbjct: 290  VVWGKKDALVVYRGCSHGLTSKISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNG 349

Query: 1653 TTLDENMCLKVGEENSLPTSIFMDKIFRTKPIDRSLYEREGDRLLDGLGPRFVDWWMWKP 1474
            +TL   +  +  E+ S+P +IFM +    +P+  SLYERE DRLLDGLGPRF+DWWM KP
Sbjct: 350  STLQSGLYREDREKESMPINIFMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKP 409

Query: 1473 LPVDADLLSEVVPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQGL 1294
            LP+DADLL E VPGF+PP RLSPP+ R  LTDDEL YLRKL HPLP HF LG+NR LQGL
Sbjct: 410  LPIDADLLPEEVPGFRPPLRLSPPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGL 469

Query: 1293 AAAILKLWEKSLVAKIAVKWGIPNTDNEQMANELKRLTGGVLLLRNKFLIILYRGKDFLP 1114
            AAAILKLWEKSL+AKIA+KWGI NTDNEQMA ELK LTGGVLL+RNKFL+ILYRGKDFLP
Sbjct: 470  AAAILKLWEKSLIAKIAIKWGIQNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLP 529

Query: 1113 CGVENLIVERERELQICQLHEEGARLKAIETFCLPDEPPEETSRAGTLSEFQDIQTEFGD 934
             GV NL+VERE  L+ CQL+EEGAR+K  ET  + DEP  +TS  GTLSEF+DIQT FGD
Sbjct: 530  QGVANLVVEREMALRRCQLNEEGARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGD 589

Query: 933  LGMGNRXXXXXXXXXXXXXXXXLRKQERKLFILNIKIEKSAKELSKLNSAWKPSEQDPDL 754
            L   +                 LR QERKL ILNIKIEKSAKEL+KL S+ +P+EQD DL
Sbjct: 590  LKKESSELELQLEAQKENLERELRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDL 649

Query: 753  EMITEEERQCLRKIALKMNSNLLLGRRGVFDGVLEGLHQHWKHREVAKVITMQKLFAQVI 574
            E+ITEEER+CLRKI LK+NS L+LGRRGVF+GV+EG++QHWKHREV KVITMQ++FA+VI
Sbjct: 650  EIITEEERECLRKIGLKLNSFLVLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVI 709

Query: 573  FTAKSLVAESGGILISVDKLKEGHAIIIYRGKNYRRPSKLMTLNLLSKRQALKRSLEMQR 394
            +TAK LVAE+GGIL+SV+KLKEGHA+IIYRGKNYRRP KLMT NLL+KR+AL++S+E+QR
Sbjct: 710  YTAKFLVAETGGILVSVEKLKEGHALIIYRGKNYRRPLKLMTNNLLTKREALRQSIELQR 769

Query: 393  LGSLKFFAYQRQRAISDLKIKFAELQESR 307
            +GSLKFFAYQR++AI DLK+K AEL++ R
Sbjct: 770  IGSLKFFAYQRRQAILDLKLKLAELKDRR 798


>EOY04146.1 maize chloroplast splicing factor CRS1, putative isoform 4 [Theobroma
            cacao]
          Length = 767

 Score =  866 bits (2237), Expect = 0.0
 Identities = 457/744 (61%), Positives = 554/744 (74%), Gaps = 13/744 (1%)
 Frame = -1

Query: 2514 SSVNTNQNTPKTFKITNPV-------IKLSPNAPVNKMPTAPWMRSPVVLQPDEIINPSK 2356
            SS+N++QN  KT K    +       +   PN    KMPTAPWM+ P++LQP E++NPSK
Sbjct: 27   SSLNSSQNPSKTHKENRSLNNNSKFSVSKDPNNGPIKMPTAPWMKGPLLLQPHEVLNPSK 86

Query: 2355 PKTKKSFEKT----DKGLTAKESGVRGKKAMKRIIQNIENLQKDQILNDSQKKDLEKFEF 2188
              +KKS        DK L  KESGVRGKK MK+II+N+E LQ +++L D+Q    E+FE 
Sbjct: 87   STSKKSSNSKAKAPDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLEDTQIGIREEFEV 146

Query: 2187 RGCFEENGS-GEVDLKGGFGGKVPWVREE-RFVFRRMKKERVVTKAEMKXXXXXXXXXXX 2014
                EE GS GEV     F GK+PW+REE + VFRRMKKE+++T+AE+            
Sbjct: 147  GNWLEEFGSDGEVKR---FDGKMPWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRR 203

Query: 2013 XXXXXRKWVKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGL 1834
                 RKW+KV K GVT++VV EI+LAWR+NEL MVKF VPLCRNMDRAREI+E+KT GL
Sbjct: 204  KAMRMRKWIKVMKLGVTKAVVDEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGL 263

Query: 1833 VIWTKKDAHVIYRGDSYRFASKFSVKLRPRFADGREKPFLKSTHLDLENKVNSSCIKSNT 1654
            V+W KKDA V+YRG S+   SK S    PR ADG+E      +HL   N +N S  K N 
Sbjct: 264  VVWGKKDALVVYRGCSHGLTSKISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNG 323

Query: 1653 TTLDENMCLKVGEENSLPTSIFMDKIFRTKPIDRSLYEREGDRLLDGLGPRFVDWWMWKP 1474
            +TL   +  +  E+ S+P +IFM +    +P+  SLYERE DRLLDGLGPRF+DWWM KP
Sbjct: 324  STLQSGLYREDREKESMPINIFMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKP 383

Query: 1473 LPVDADLLSEVVPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQGL 1294
            LP+DADLL E VPGF+PP RLSPP+ R  LTDDEL YLRKL HPLP HF LG+NR LQGL
Sbjct: 384  LPIDADLLPEEVPGFRPPLRLSPPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGL 443

Query: 1293 AAAILKLWEKSLVAKIAVKWGIPNTDNEQMANELKRLTGGVLLLRNKFLIILYRGKDFLP 1114
            AAAILKLWEKSL+AKIA+KWGI NTDNEQMA ELK LTGGVLL+RNKFL+ILYRGKDFLP
Sbjct: 444  AAAILKLWEKSLIAKIAIKWGIQNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLP 503

Query: 1113 CGVENLIVERERELQICQLHEEGARLKAIETFCLPDEPPEETSRAGTLSEFQDIQTEFGD 934
             GV NL+VERE  L+ CQL+EEGAR+K  ET  + DEP  +TS  GTLSEF+DIQT FGD
Sbjct: 504  QGVANLVVEREMALRRCQLNEEGARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGD 563

Query: 933  LGMGNRXXXXXXXXXXXXXXXXLRKQERKLFILNIKIEKSAKELSKLNSAWKPSEQDPDL 754
            L   +                 LR QERKL ILNIKIEKSAKEL+KL S+ +P+EQD DL
Sbjct: 564  LKKESSELELQLEAQKENLERELRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDL 623

Query: 753  EMITEEERQCLRKIALKMNSNLLLGRRGVFDGVLEGLHQHWKHREVAKVITMQKLFAQVI 574
            E+ITEEER+CLRKI LK+NS L+LGRRGVF+GV+EG++QHWKHREV KVITMQ++FA+VI
Sbjct: 624  EIITEEERECLRKIGLKLNSFLVLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVI 683

Query: 573  FTAKSLVAESGGILISVDKLKEGHAIIIYRGKNYRRPSKLMTLNLLSKRQALKRSLEMQR 394
            +TAK LVAE+GGIL+SV+KLKEGHA+IIYRGKNYRRP KLMT NLL+KR+AL++S+E+QR
Sbjct: 684  YTAKFLVAETGGILVSVEKLKEGHALIIYRGKNYRRPLKLMTNNLLTKREALRQSIELQR 743

Query: 393  LGSLKFFAYQRQRAISDLKIKFAE 322
            +GSLKFFAYQR++AI DLK+K  +
Sbjct: 744  IGSLKFFAYQRRQAILDLKLKLGK 767


>EOY04145.1 maize chloroplast splicing factor CRS1, putative isoform 3 [Theobroma
            cacao]
          Length = 788

 Score =  866 bits (2238), Expect = 0.0
 Identities = 457/745 (61%), Positives = 554/745 (74%), Gaps = 13/745 (1%)
 Frame = -1

Query: 2514 SSVNTNQNTPKTFKITNPV-------IKLSPNAPVNKMPTAPWMRSPVVLQPDEIINPSK 2356
            SS+N++QN  KT K    +       +   PN    KMPTAPWM+ P++LQP E++NPSK
Sbjct: 27   SSLNSSQNPSKTHKENRSLNNNSKFSVSKDPNNGPIKMPTAPWMKGPLLLQPHEVLNPSK 86

Query: 2355 PKTKKSFEKT----DKGLTAKESGVRGKKAMKRIIQNIENLQKDQILNDSQKKDLEKFEF 2188
              +KKS        DK L  KESGVRGKK MK+II+N+E LQ +++L D+Q    E+FE 
Sbjct: 87   STSKKSSNSKAKAPDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLEDTQIGIREEFEV 146

Query: 2187 RGCFEENGS-GEVDLKGGFGGKVPWVREE-RFVFRRMKKERVVTKAEMKXXXXXXXXXXX 2014
                EE GS GEV     F GK+PW+REE + VFRRMKKE+++T+AE+            
Sbjct: 147  GNWLEEFGSDGEVKR---FDGKMPWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRR 203

Query: 2013 XXXXXRKWVKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGL 1834
                 RKW+KV K GVT++VV EI+LAWR+NEL MVKF VPLCRNMDRAREI+E+KT GL
Sbjct: 204  KAMRMRKWIKVMKLGVTKAVVDEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGL 263

Query: 1833 VIWTKKDAHVIYRGDSYRFASKFSVKLRPRFADGREKPFLKSTHLDLENKVNSSCIKSNT 1654
            V+W KKDA V+YRG S+   SK S    PR ADG+E      +HL   N +N S  K N 
Sbjct: 264  VVWGKKDALVVYRGCSHGLTSKISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNG 323

Query: 1653 TTLDENMCLKVGEENSLPTSIFMDKIFRTKPIDRSLYEREGDRLLDGLGPRFVDWWMWKP 1474
            +TL   +  +  E+ S+P +IFM +    +P+  SLYERE DRLLDGLGPRF+DWWM KP
Sbjct: 324  STLQSGLYREDREKESMPINIFMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKP 383

Query: 1473 LPVDADLLSEVVPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQGL 1294
            LP+DADLL E VPGF+PP RLSPP+ R  LTDDEL YLRKL HPLP HF LG+NR LQGL
Sbjct: 384  LPIDADLLPEEVPGFRPPLRLSPPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGL 443

Query: 1293 AAAILKLWEKSLVAKIAVKWGIPNTDNEQMANELKRLTGGVLLLRNKFLIILYRGKDFLP 1114
            AAAILKLWEKSL+AKIA+KWGI NTDNEQMA ELK LTGGVLL+RNKFL+ILYRGKDFLP
Sbjct: 444  AAAILKLWEKSLIAKIAIKWGIQNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLP 503

Query: 1113 CGVENLIVERERELQICQLHEEGARLKAIETFCLPDEPPEETSRAGTLSEFQDIQTEFGD 934
             GV NL+VERE  L+ CQL+EEGAR+K  ET  + DEP  +TS  GTLSEF+DIQT FGD
Sbjct: 504  QGVANLVVEREMALRRCQLNEEGARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGD 563

Query: 933  LGMGNRXXXXXXXXXXXXXXXXLRKQERKLFILNIKIEKSAKELSKLNSAWKPSEQDPDL 754
            L   +                 LR QERKL ILNIKIEKSAKEL+KL S+ +P+EQD DL
Sbjct: 564  LKKESSELELQLEAQKENLERELRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDL 623

Query: 753  EMITEEERQCLRKIALKMNSNLLLGRRGVFDGVLEGLHQHWKHREVAKVITMQKLFAQVI 574
            E+ITEEER+CLRKI LK+NS L+LGRRGVF+GV+EG++QHWKHREV KVITMQ++FA+VI
Sbjct: 624  EIITEEERECLRKIGLKLNSFLVLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVI 683

Query: 573  FTAKSLVAESGGILISVDKLKEGHAIIIYRGKNYRRPSKLMTLNLLSKRQALKRSLEMQR 394
            +TAK LVAE+GGIL+SV+KLKEGHA+IIYRGKNYRRP KLMT NLL+KR+AL++S+E+QR
Sbjct: 684  YTAKFLVAETGGILVSVEKLKEGHALIIYRGKNYRRPLKLMTNNLLTKREALRQSIELQR 743

Query: 393  LGSLKFFAYQRQRAISDLKIKFAEL 319
            +GSLKFFAYQR++AI DLK+K   +
Sbjct: 744  IGSLKFFAYQRRQAILDLKLKLVRI 768


>GAV85552.1 CRS1_YhbY domain-containing protein [Cephalotus follicularis]
          Length = 782

 Score =  863 bits (2231), Expect = 0.0
 Identities = 471/769 (61%), Positives = 564/769 (73%), Gaps = 21/769 (2%)
 Frame = -1

Query: 2520 ICSSVNTNQN-TPKT-----FKITNPVIKLS---PN---APVNKMPTAPWMRSPVVLQPD 2377
            I SS+N N + TPK       K   P   LS   PN   AP+ KMPTAPWM  P++LQ  
Sbjct: 17   ISSSLNRNHSKTPKPNHHQQHKTKTPDHSLSTTDPNVALAPI-KMPTAPWMMGPLLLQSH 75

Query: 2376 EIINPSKP------KTKKSFEKTDKGLTAKESGVRGKKAMKRIIQNIENLQKDQILNDSQ 2215
            ++++ SKP      +  K+ +K++K L  KESGVRGKKAMK+IIQNI  L +     D+Q
Sbjct: 76   QVLDLSKPIPRKNSRDAKAEQKSNKALFGKESGVRGKKAMKKIIQNIGRLNQSDYFADTQ 135

Query: 2214 KKDLEKFEFRGCFEENGSG--EVDLKGGFGGK-VPWVREERFVFRRMKKERVVTKAEMKX 2044
             +  E+FE     E+ G G  + D++ GFGGK +PW REE+ V  R++KE+VVT AEM  
Sbjct: 136  MEKGEEFEV---LEKIGGGGDDDDVEVGFGGKNMPWTREEKVVIGRVRKEKVVTAAEMSL 192

Query: 2043 XXXXXXXXXXXXXXXRKWVKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAR 1864
                           RKWVKVKKAGVT+ VV EIR  WRRNELAMVKFDVPLC+NMDRAR
Sbjct: 193  DKALLERLRDVAKTMRKWVKVKKAGVTQGVVDEIRSIWRRNELAMVKFDVPLCKNMDRAR 252

Query: 1863 EILELKTGGLVIWTKKDAHVIYRGDSYRFASKFSVKLRPRFADGREKPFLKSTHLDLENK 1684
            EI+ELKTGGLV+W+ KD  VIYRG +Y+   K   + +   A G+E    K +HL  E  
Sbjct: 253  EIVELKTGGLVVWSTKDTLVIYRGCNYKLTVKTIPQRQTWSAGGQEIHIAKFSHLTSEKT 312

Query: 1683 VNSSCIKSNTTTLDENMCLKVGEENSLPTSIFMDKIFRTKPIDRSLYEREGDRLLDGLGP 1504
            +N S ++S T+ +DE MCLK GEE S+P   FM ++   +PI+ SL+ERE DRLLDGLGP
Sbjct: 313  INISQLESKTSPVDEKMCLKDGEELSIPAGSFMRELSDGEPINGSLFERETDRLLDGLGP 372

Query: 1503 RFVDWWMWKPLPVDADLLSEVVPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFV 1324
            RF+DWWM KPLP+DADLL E+VPGF+  FRL P +ARSKL D EL YLRKLAH LPTHFV
Sbjct: 373  RFIDWWMRKPLPIDADLLPEMVPGFRLTFRLCPSNARSKLKDGELMYLRKLAHALPTHFV 432

Query: 1323 LGRNRGLQGLAAAILKLWEKSLVAKIAVKWGIPNTDNEQMANELKRLTGGVLLLRNKFLI 1144
            LGRNR LQGLAAAILKLWEK L+ KIAVKWG+PNT+NE MANELK LTGGVLLLRNKF I
Sbjct: 433  LGRNRRLQGLAAAILKLWEKCLIVKIAVKWGVPNTNNELMANELKFLTGGVLLLRNKFYI 492

Query: 1143 ILYRGKDFLPCGVENLIVERERELQICQLHEEGARLKAIETFCLPDEPPEETSRAGTLSE 964
            IL+RGKDF+PC +   I ERE EL++CQL+EEGARL+AIE F + DEP   TS  GTLSE
Sbjct: 493  ILFRGKDFVPCQLVESIAEREMELKMCQLNEEGARLRAIEIFHMADEPLANTSIIGTLSE 552

Query: 963  FQDIQTEFGDLGMGNRXXXXXXXXXXXXXXXXLRKQERKLFILNIKIEKSAKELSKLNSA 784
            FQDIQT+FGDL  G+R                L+ QE KL ILN KI+KSAKELSKLNS 
Sbjct: 553  FQDIQTKFGDLEKGDREFELQIEAEKEKVERELKMQEHKLSILNSKIDKSAKELSKLNSK 612

Query: 783  WKPSEQDPDLEMITEEERQCLRKIALKMNSNLLLGRRGVFDGVLEGLHQHWKHREVAKVI 604
            W PSE D D EM+TEEER+C RK+ LKM  +L+LGRRGVF GVLEGLHQHWKHREV KVI
Sbjct: 613  WTPSEHDADQEMMTEEERECFRKMGLKMVGSLMLGRRGVFGGVLEGLHQHWKHREVVKVI 672

Query: 603  TMQKLFAQVIFTAKSLVAESGGILISVDKLKEGHAIIIYRGKNYRRPSKLMTLNLLSKRQ 424
            TMQ+ F +VI+TAK L AESGG+L+SV+KLKEGHAIIIYRGKNY+RP KL T NLL+KR 
Sbjct: 673  TMQREFGRVIYTAKLLEAESGGVLVSVEKLKEGHAIIIYRGKNYKRPLKLATHNLLTKRD 732

Query: 423  ALKRSLEMQRLGSLKFFAYQRQRAISDLKIKFAELQESRQKNMKISAQT 277
            AL+RSLEMQRLGSLKFFAYQRQRAI++LK+K AEL++ +++N+K S QT
Sbjct: 733  ALRRSLEMQRLGSLKFFAYQRQRAITELKLKLAELEDFKEENLK-SPQT 780


>XP_010660411.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Vitis vinifera]
          Length = 828

 Score =  865 bits (2235), Expect = 0.0
 Identities = 449/714 (62%), Positives = 540/714 (75%), Gaps = 5/714 (0%)
 Frame = -1

Query: 2427 KMPTAPWMRSPVVLQPDEIINPSKPKTKK-----SFEKTDKGLTAKESGVRGKKAMKRII 2263
            KMPTAPWM+ P++LQP+E+++ SK + KK       EK D+ LT K SG RG KAMK+I+
Sbjct: 74   KMPTAPWMKGPLLLQPNEVLDLSKARPKKVAGSAGAEKPDRSLTEKVSGGRGAKAMKKIM 133

Query: 2262 QNIENLQKDQILNDSQKKDLEKFEFRGCFEENGSGEVDLKGGFGGKVPWVREERFVFRRM 2083
            Q+I  LQ+    +++Q+ + E+FEF    E  G  E       GGK+PW++ E+ VFRR 
Sbjct: 134  QSIVKLQETHTSDETQE-NTEEFEFGVSLEGIGGDE---NSRIGGKMPWLKTEKVVFRRT 189

Query: 2082 KKERVVTKAEMKXXXXXXXXXXXXXXXXRKWVKVKKAGVTESVVFEIRLAWRRNELAMVK 1903
            KKE+VVT AE+                 RKWVKVKKAGVTESVV +I + W+ +ELAMVK
Sbjct: 190  KKEKVVTAAELTLDPMLLERLRGEAVKMRKWVKVKKAGVTESVVDQIHMVWKSDELAMVK 249

Query: 1902 FDVPLCRNMDRAREILELKTGGLVIWTKKDAHVIYRGDSYRFASKFSVKLRPRFADGREK 1723
            FD+PLCRNMDRAREILE+KT GLVIW+KKD  V+YRG +Y+  SK   K+RP    G + 
Sbjct: 250  FDMPLCRNMDRAREILEIKTRGLVIWSKKDTLVVYRGSNYQSTSKHFQKMRPGLVAGADA 309

Query: 1722 PFLKSTHLDLENKVNSSCIKSNTTTLDENMCLKVGEENSLPTSIFMDKIFRTKPIDRSLY 1543
               K    + E+ +  S IK + +T  E M  K GEE+S PT IFM+++  ++P++ SLY
Sbjct: 310  SNSKLNQSNFEDDLTISEIKFHESTTGEKMGRKDGEEDSSPTGIFMEEMVDSQPVNGSLY 369

Query: 1542 EREGDRLLDGLGPRFVDWWMWKPLPVDADLLSEVVPGFKPPFRLSPPDARSKLTDDELTY 1363
            ERE DRLLDGLGPRF+DWW  KPLPVDADLL EV+PGF+PPFRLSPP  RSKLTDDELTY
Sbjct: 370  EREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGFRPPFRLSPPQTRSKLTDDELTY 429

Query: 1362 LRKLAHPLPTHFVLGRNRGLQGLAAAILKLWEKSLVAKIAVKWGIPNTDNEQMANELKRL 1183
            LRKLA+ LPTHFVLGRNR LQGLAAAILKLWEKSL+ KIA+KWGIPNT NEQMANELK L
Sbjct: 430  LRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVKIAIKWGIPNTKNEQMANELKCL 489

Query: 1182 TGGVLLLRNKFLIILYRGKDFLPCGVENLIVERERELQICQLHEEGARLKAIETFCLPDE 1003
            TGGVLLLRNKF IILYRGKDFLPC V NLIVERE E + CQ+ EE ARLKAIET  + D+
Sbjct: 490  TGGVLLLRNKFFIILYRGKDFLPCRVANLIVEREMEFKGCQIREEDARLKAIETSFVTDK 549

Query: 1002 PPEETSRAGTLSEFQDIQTEFGDLGMGNRXXXXXXXXXXXXXXXXLRKQERKLFILNIKI 823
            P   TS  GTLSEFQ+I+TEF  L  GN                 L+KQER LFIL  KI
Sbjct: 550  PLANTSTTGTLSEFQNIETEFRGLKDGNTEIEVELEAEKERLEKELKKQERNLFILKRKI 609

Query: 822  EKSAKELSKLNSAWKPSEQDPDLEMITEEERQCLRKIALKMNSNLLLGRRGVFDGVLEGL 643
            E+SAK L+KLNSAW+P++ D D EMITEEER+C RKI  KM+S+LLLGRRGVFDGV+EGL
Sbjct: 610  ERSAKVLAKLNSAWRPADHDADKEMITEEERECFRKIGQKMDSSLLLGRRGVFDGVIEGL 669

Query: 642  HQHWKHREVAKVITMQKLFAQVIFTAKSLVAESGGILISVDKLKEGHAIIIYRGKNYRRP 463
            HQHWKHRE+ KVITMQ+ F+QV++TAK L +ESGG+L+S+DKLKEGHAIIIYRGKNYRRP
Sbjct: 670  HQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDKLKEGHAIIIYRGKNYRRP 729

Query: 462  SKLMTLNLLSKRQALKRSLEMQRLGSLKFFAYQRQRAISDLKIKFAELQESRQK 301
             KL+  NLL+KR+AL RSLEMQR+GSLKFFAYQRQ+AISDLK+K A+LQ+  ++
Sbjct: 730  IKLVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQAISDLKLKLADLQKGSRR 783


>XP_019080763.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Vitis vinifera] XP_019080764.1
            PREDICTED: chloroplastic group IIA intron splicing
            facilitator CRS1, chloroplastic isoform X1 [Vitis
            vinifera] XP_019080765.1 PREDICTED: chloroplastic group
            IIA intron splicing facilitator CRS1, chloroplastic
            isoform X1 [Vitis vinifera]
          Length = 840

 Score =  857 bits (2214), Expect = 0.0
 Identities = 449/726 (61%), Positives = 540/726 (74%), Gaps = 17/726 (2%)
 Frame = -1

Query: 2427 KMPTAPWMRSPVVLQPDEIINPSKPKTKK-----SFEKTDKGLTAKESGVRGKKAMKRII 2263
            KMPTAPWM+ P++LQP+E+++ SK + KK       EK D+ LT K SG RG KAMK+I+
Sbjct: 74   KMPTAPWMKGPLLLQPNEVLDLSKARPKKVAGSAGAEKPDRSLTEKVSGGRGAKAMKKIM 133

Query: 2262 QNIENLQKDQILNDSQKKDLEKFEFRGCFEENGSGEVDLKGGFGGKVPWVREERFVFRRM 2083
            Q+I  LQ+    +++Q+ + E+FEF    E  G  E       GGK+PW++ E+ VFRR 
Sbjct: 134  QSIVKLQETHTSDETQE-NTEEFEFGVSLEGIGGDE---NSRIGGKMPWLKTEKVVFRRT 189

Query: 2082 KKERVVTKAEMKXXXXXXXXXXXXXXXXRKWVKVKKAGVTESVVFEIRLAWRRNELAMVK 1903
            KKE+VVT AE+                 RKWVKVKKAGVTESVV +I + W+ +ELAMVK
Sbjct: 190  KKEKVVTAAELTLDPMLLERLRGEAVKMRKWVKVKKAGVTESVVDQIHMVWKSDELAMVK 249

Query: 1902 FDVPLCRNMDRAREILELKTGGLVIWTKKDAHVIYRGDSYRFASKFSVKLRPRFADGREK 1723
            FD+PLCRNMDRAREILE+KT GLVIW+KKD  V+YRG +Y+  SK   K+RP    G + 
Sbjct: 250  FDMPLCRNMDRAREILEIKTRGLVIWSKKDTLVVYRGSNYQSTSKHFQKMRPGLVAGADA 309

Query: 1722 PFLKSTHLDLENKVNSSCIKSNTTTLDENMCLKVGEENSLPTSIFMDKIFRTKPIDRSLY 1543
               K    + E+ +  S IK + +T  E M  K GEE+S PT IFM+++  ++P++ SLY
Sbjct: 310  SNSKLNQSNFEDDLTISEIKFHESTTGEKMGRKDGEEDSSPTGIFMEEMVDSQPVNGSLY 369

Query: 1542 EREGDRLLDGLGPRFVDWWMWKPLPVDADLLSEVVPGFKPPFRLSPPDARSKLTDDELTY 1363
            ERE DRLLDGLGPRF+DWW  KPLPVDADLL EV+PGF+PPFRLSPP  RSKLTDDELTY
Sbjct: 370  EREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGFRPPFRLSPPQTRSKLTDDELTY 429

Query: 1362 LRKLAHPLPTHFVLGRNRGLQGLAAAILKLWEKSLVAKIAVKWGIPNTDNEQMANELKR- 1186
            LRKLA+ LPTHFVLGRNR LQGLAAAILKLWEKSL+ KIA+KWGIPNT NEQMANELK  
Sbjct: 430  LRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVKIAIKWGIPNTKNEQMANELKAS 489

Query: 1185 -----------LTGGVLLLRNKFLIILYRGKDFLPCGVENLIVERERELQICQLHEEGAR 1039
                       LTGGVLLLRNKF IILYRGKDFLPC V NLIVERE E + CQ+ EE AR
Sbjct: 490  LVTRRFHAVNCLTGGVLLLRNKFFIILYRGKDFLPCRVANLIVEREMEFKGCQIREEDAR 549

Query: 1038 LKAIETFCLPDEPPEETSRAGTLSEFQDIQTEFGDLGMGNRXXXXXXXXXXXXXXXXLRK 859
            LKAIET  + D+P   TS  GTLSEFQ+I+TEF  L  GN                 L+K
Sbjct: 550  LKAIETSFVTDKPLANTSTTGTLSEFQNIETEFRGLKDGNTEIEVELEAEKERLEKELKK 609

Query: 858  QERKLFILNIKIEKSAKELSKLNSAWKPSEQDPDLEMITEEERQCLRKIALKMNSNLLLG 679
            QER LFIL  KIE+SAK L+KLNSAW+P++ D D EMITEEER+C RKI  KM+S+LLLG
Sbjct: 610  QERNLFILKRKIERSAKVLAKLNSAWRPADHDADKEMITEEERECFRKIGQKMDSSLLLG 669

Query: 678  RRGVFDGVLEGLHQHWKHREVAKVITMQKLFAQVIFTAKSLVAESGGILISVDKLKEGHA 499
            RRGVFDGV+EGLHQHWKHRE+ KVITMQ+ F+QV++TAK L +ESGG+L+S+DKLKEGHA
Sbjct: 670  RRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDKLKEGHA 729

Query: 498  IIIYRGKNYRRPSKLMTLNLLSKRQALKRSLEMQRLGSLKFFAYQRQRAISDLKIKFAEL 319
            IIIYRGKNYRRP KL+  NLL+KR+AL RSLEMQR+GSLKFFAYQRQ+AISDLK+K A+L
Sbjct: 730  IIIYRGKNYRRPIKLVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQAISDLKLKLADL 789

Query: 318  QESRQK 301
            Q+  ++
Sbjct: 790  QKGSRR 795


>OMO80207.1 hypothetical protein CCACVL1_13100 [Corchorus capsularis]
          Length = 766

 Score =  851 bits (2199), Expect = 0.0
 Identities = 449/758 (59%), Positives = 556/758 (73%), Gaps = 14/758 (1%)
 Frame = -1

Query: 2520 ICSSVNTNQNTPKTFK-------ITNPVIKLSPNAPVNKMPTAPWMRSPVVLQPDEIINP 2362
            + SS+N+NQN  KT K        +   +   PN    KMPTAPWM+ P++LQP E++NP
Sbjct: 12   LSSSLNSNQNPSKTHKQNLSFNNSSKSSVSKDPNNGPLKMPTAPWMKGPLLLQPHEVLNP 71

Query: 2361 SKPKTKKSF----EKTDKGLTAKESGVRGKKAMKRIIQNIENLQKDQILNDSQKKDLEKF 2194
            +KP TK+S     E  DK L  KESGVRGKK M++II+N+E LQ +++L  +Q +  E+F
Sbjct: 72   TKPTTKRSSNGNAESPDKALFGKESGVRGKKVMEKIIRNVERLQGNEVLEGTQSEICEEF 131

Query: 2193 EFRGCFEENGS-GEVDLKGGFGGKVPWVR-EERFVFRRMKKERVVTKAEMKXXXXXXXXX 2020
            E     EE GS GEV     F G++PW+R EE+ VFRRMKKE+V+T+AE+          
Sbjct: 132  EVGDWLEEFGSDGEVKR---FNGRIPWLRDEEKVVFRRMKKEKVLTQAEISLDKDLLERL 188

Query: 2019 XXXXXXXRKWVKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTG 1840
                   RKW+KV KAGVT++V+ EI+ +WR+NEL M+KF VPLCRNMDRAREI+E+KTG
Sbjct: 189  RGKAMRMRKWIKVMKAGVTQAVIDEIKSSWRKNELVMLKFGVPLCRNMDRAREIVEMKTG 248

Query: 1839 GLVIWTKKDAHVIYRGDSYRFASKFSVKLRPRFADGREKPFLKSTHLDLENKVNSSCIKS 1660
            GLV+W+KKDA V++RG  +   SK S       A G+E   L  ++L   N +N S  K 
Sbjct: 249  GLVVWSKKDALVVFRGCKHELTSKISPMEYSHPASGQEISSLTCSNLTSGNNINLSQEKF 308

Query: 1659 NTTTLDENMCLKVGEENSLPTSIFMDKIFRTKPIDRSLYEREGDRLLDGLGPRFVDWWMW 1480
            NT+TL +++  +  E+ S+PTSIF+      + +  SLYERE DRLLDGLGPRF+DWWM 
Sbjct: 309  NTSTLGKSLYREEKEKESMPTSIFIKADDNNEMVMGSLYEREIDRLLDGLGPRFIDWWMR 368

Query: 1479 KPLPVDADLLSEVVPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQ 1300
            KPLPVDADLL EVVPGF+PP RLSPP+   KLT+DELTYLRKLAHPLP HF LGRNR LQ
Sbjct: 369  KPLPVDADLLPEVVPGFRPPLRLSPPNTTPKLTEDELTYLRKLAHPLPFHFALGRNRNLQ 428

Query: 1299 GLAAAILKLWEKSLVAKIAVKWGIPNTDNEQMANELKRLTGGVLLLRNKFLIILYRGKDF 1120
            GLAAAILKLWEKSLVAKIA+KWGI NTDNEQMA ELK LTGGVLLLRNK+LIILYRGKDF
Sbjct: 429  GLAAAILKLWEKSLVAKIAIKWGIQNTDNEQMAYELKNLTGGVLLLRNKYLIILYRGKDF 488

Query: 1119 LPCGVENLIVERERELQICQLHEEGARLKAIETFCLPDEPPEETSRAGTLSEFQDIQTEF 940
            LP GV ++++ERE  L+ CQL+EEGAR+K  ETF +PDEP  +TS  GTLSEFQDIQ++F
Sbjct: 489  LPQGVADMVMEREVALRRCQLNEEGARVKVAETFQVPDEPLAKTSTVGTLSEFQDIQSKF 548

Query: 939  GDLGMGNRXXXXXXXXXXXXXXXXLRKQERKLFILNIKIEKSAKELSKLNSAWKPSEQDP 760
            GD    N                 LR QERKL IL IKIEKSAKEL KLNS+W+P++QD 
Sbjct: 549  GDFVRENSELELQLEAQRENLERELRDQERKLSILKIKIEKSAKELEKLNSSWQPAQQDV 608

Query: 759  DLEMITEEERQCLRKIALKMNSNLLLGRRGVFDGVLEGLHQHWKHREVAKVITMQKLFAQ 580
            D E ITEEER+CLRKI LK+NS L+LGRRGVFDGV+EG+HQHWKHREV K+ITMQ++F++
Sbjct: 609  DQEFITEEERECLRKIGLKLNSCLVLGRRGVFDGVIEGVHQHWKHREVIKIITMQRVFSR 668

Query: 579  VIFTAKSLVAESGGILISVDKLKEGHAIIIYRGKNYRRPSKLMTLNLLSKRQALKRSLEM 400
            VI+TAK LVAESGGIL+S++KLKEGHAII+YRGKNYRRP KLMT NLL++R+ALKRS+EM
Sbjct: 669  VIYTAKMLVAESGGILVSIEKLKEGHAIIMYRGKNYRRPPKLMTDNLLTRREALKRSIEM 728

Query: 399  QRLGSL-KFFAYQRQRAISDLKIKFAELQESRQKNMKI 289
            QR+G+L +   Y  +   +      A+  ES+   MK+
Sbjct: 729  QRIGALIRVIVYAAKSIANTYSDDLAQYPESKVGMMKL 766


>XP_019080766.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X3 [Vitis vinifera]
          Length = 801

 Score =  852 bits (2201), Expect = 0.0
 Identities = 452/732 (61%), Positives = 541/732 (73%), Gaps = 22/732 (3%)
 Frame = -1

Query: 2427 KMPTAPWMRSPVVLQPDEIINPSKPKTKK-----SFEKTDKGLTAKESGVRGKKAMKRII 2263
            KMPTAPWM+ P++LQP+E+++ SK + KK       EK D+ LT K SG RG KAMK+I+
Sbjct: 74   KMPTAPWMKGPLLLQPNEVLDLSKARPKKVAGSAGAEKPDRSLTEKVSGGRGAKAMKKIM 133

Query: 2262 QNIENLQKDQILNDSQKKDLEKFEFRGCFEENGSGEVDLKGGFGGKVPWVREERFVFRRM 2083
            Q+I  LQ+    +++Q+ + E+FEF    E  G  E       GGK+PW++ E+ VFRR 
Sbjct: 134  QSIVKLQETHTSDETQE-NTEEFEFGVSLEGIGGDE---NSRIGGKMPWLKTEKVVFRRT 189

Query: 2082 KKERVVTKAEMKXXXXXXXXXXXXXXXXRKWVKVKKAGVTESVVFEIRLAWRRNELAMVK 1903
            KKE+VVT AE+                 RKWVKVKKAGVTESVV +I + W+ +ELAMVK
Sbjct: 190  KKEKVVTAAELTLDPMLLERLRGEAVKMRKWVKVKKAGVTESVVDQIHMVWKSDELAMVK 249

Query: 1902 FDVPLCRNMDRAREILELKTGGLVIWTKKDAHVIYRGDSYRFASKFSVKLRPRFADGREK 1723
            FD+PLCRNMDRAREILE+KT GLVIW+KKD  V+YRG +Y+  SK   K+RP    G + 
Sbjct: 250  FDMPLCRNMDRAREILEIKTRGLVIWSKKDTLVVYRGSNYQSTSKHFQKMRPGLVAGADA 309

Query: 1722 PFLKSTHLDLENKVNSSCIKSNTTTLDENMCLKVGEENSLPTSIFMDKIFRTKPIDRSLY 1543
               K    + E+ +  S IK + +T  E M  K GEE+S PT IFM+++  ++P++ SLY
Sbjct: 310  SNSKLNQSNFEDDLTISEIKFHESTTGEKMGRKDGEEDSSPTGIFMEEMVDSQPVNGSLY 369

Query: 1542 EREGDRLLDGLGPRFVDWWMWKPLPVDADLLSEVVPGFKPPFRLSPPDARSKLTDDELTY 1363
            ERE DRLLDGLGPRF+DWW  KPLPVDADLL EV+PGF+PPFRLSPP  RSKLTDDELTY
Sbjct: 370  EREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGFRPPFRLSPPQTRSKLTDDELTY 429

Query: 1362 LRKLAHPLPTHFVLGRNRGLQGLAAAILKLWEKSLVAKIAVKWGIPNTDNEQMANELKR- 1186
            LRKLA+ LPTHFVLGRNR LQGLAAAILKLWEKSL+ KIA+KWGIPNT NEQMANELK  
Sbjct: 430  LRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVKIAIKWGIPNTKNEQMANELKAS 489

Query: 1185 -----------LTGGVLLLRNKFLIILYRGKDFLPCGVENLIVERERELQICQLHEEGAR 1039
                       LTGGVLLLRNKF IILYRGKDFLPC V NLIVERE E + CQ+ EE AR
Sbjct: 490  LVTRRFHAVNCLTGGVLLLRNKFFIILYRGKDFLPCRVANLIVEREMEFKGCQIREEDAR 549

Query: 1038 LKAIETFCLPDEPPEETSRAGTLSEFQDIQTEFGDLGMGNRXXXXXXXXXXXXXXXXLRK 859
            LKAIET  + D+P   TS  GTLSEFQ+I+TEF  L  GN                 L+K
Sbjct: 550  LKAIETSFVTDKPLANTSTTGTLSEFQNIETEFRGLKDGNTEIEVELEAEKERLEKELKK 609

Query: 858  QERKLFILNIKIEKSAKELSKLNSAWKPSEQDPDLEMITEEERQCLRKIALKMNSNLLLG 679
            QER LFIL  KIE+SAK L+KLNSAW+P++ D D EMITEEER+C RKI  KM+S+LLLG
Sbjct: 610  QERNLFILKRKIERSAKVLAKLNSAWRPADHDADKEMITEEERECFRKIGQKMDSSLLLG 669

Query: 678  RRGVFDGVLEGLHQHWKHREVAKVITMQKLFAQVIFTAKSLVAESGGILISVDKLKEGHA 499
            RRGVFDGV+EGLHQHWKHRE+ KVITMQ+ F+QV++TAK L +ESGG+L+S+DKLKEGHA
Sbjct: 670  RRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDKLKEGHA 729

Query: 498  IIIYRGKNYRRPSKLMTLNLLSKRQALKRSLEMQRLGSLKFFAYQRQRAISDLKIK-FAE 322
            IIIYRGKNYRRP KL+  NLL+KR+AL RSLEMQR+GSLKFFAYQRQ+AISDLK+K F +
Sbjct: 730  IIIYRGKNYRRPIKLVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQAISDLKLKLFMK 789

Query: 321  LQ----ESRQKN 298
            L     E +QKN
Sbjct: 790  LSGRSTERKQKN 801


>OMP04744.1 hypothetical protein COLO4_09355 [Corchorus olitorius]
          Length = 713

 Score =  842 bits (2176), Expect = 0.0
 Identities = 439/729 (60%), Positives = 544/729 (74%), Gaps = 6/729 (0%)
 Frame = -1

Query: 2424 MPTAPWMRSPVVLQPDEIINPSKPKTKKSF----EKTDKGLTAKESGVRGKKAMKRIIQN 2257
            MPTAPWM+ P++LQP E++NP+KP TK+S     E  DK L  KESGVRGKK M++II+N
Sbjct: 1    MPTAPWMKGPLLLQPHEVLNPTKPTTKRSSNGNAESPDKALFGKESGVRGKKVMEKIIRN 60

Query: 2256 IENLQKDQILNDSQKKDLEKFEFRGCFEENGS-GEVDLKGGFGGKVPWVR-EERFVFRRM 2083
            +E LQ +++  ++Q +  E+FE     EE GS GEV     F G++PW+R EE+ VFRRM
Sbjct: 61   VERLQGNEVFEETQSEICEEFEVGDWLEELGSDGEVKR---FNGRMPWLRDEEKVVFRRM 117

Query: 2082 KKERVVTKAEMKXXXXXXXXXXXXXXXXRKWVKVKKAGVTESVVFEIRLAWRRNELAMVK 1903
            KKE+V+T+AE+                 RKW+KV KAGVT++VV EI+ +WR+N L M+K
Sbjct: 118  KKEKVLTQAEISLDKDLLERLRGKAMRMRKWIKVMKAGVTQAVVDEIKSSWRKNGLVMLK 177

Query: 1902 FDVPLCRNMDRAREILELKTGGLVIWTKKDAHVIYRGDSYRFASKFSVKLRPRFADGREK 1723
            F VPLCRNMDRAREI+E+KTGGLV+W+KKDA V++RG  +   SK S       A G+E 
Sbjct: 178  FGVPLCRNMDRAREIVEMKTGGLVVWSKKDALVVFRGCKHELTSKISPMEYSHSASGQET 237

Query: 1722 PFLKSTHLDLENKVNSSCIKSNTTTLDENMCLKVGEENSLPTSIFMDKIFRTKPIDRSLY 1543
              L  ++L   N +N S  K NT+TL +++  +  E+ S+PTSIF+      + +  SLY
Sbjct: 238  SSLTCSNLTSGNNINLSQEKFNTSTLGKSLYREEKEKESMPTSIFVKSDDNNEMVMGSLY 297

Query: 1542 EREGDRLLDGLGPRFVDWWMWKPLPVDADLLSEVVPGFKPPFRLSPPDARSKLTDDELTY 1363
            ERE DRLLDGLGPRF+DWWM KPLPVDADLL EVVPGF+PP RLSPP+ R KL  DELTY
Sbjct: 298  EREIDRLLDGLGPRFIDWWMRKPLPVDADLLPEVVPGFRPPLRLSPPNTRRKLRGDELTY 357

Query: 1362 LRKLAHPLPTHFVLGRNRGLQGLAAAILKLWEKSLVAKIAVKWGIPNTDNEQMANELKRL 1183
            LRKLAHPLP HF LGRNR LQGLAAAILKLWEKSLVAKIA+KWGI NTDNEQMA ELK L
Sbjct: 358  LRKLAHPLPFHFALGRNRNLQGLAAAILKLWEKSLVAKIAIKWGIQNTDNEQMAYELKNL 417

Query: 1182 TGGVLLLRNKFLIILYRGKDFLPCGVENLIVERERELQICQLHEEGARLKAIETFCLPDE 1003
            TGGVLLLRNK+LIILYRGKDFLP GV ++++ERE  L+ CQL+EEGA++K  ETF +PDE
Sbjct: 418  TGGVLLLRNKYLIILYRGKDFLPQGVADMVMEREVALRRCQLNEEGAQVKVAETFQVPDE 477

Query: 1002 PPEETSRAGTLSEFQDIQTEFGDLGMGNRXXXXXXXXXXXXXXXXLRKQERKLFILNIKI 823
            P  +TS  GTLSEFQDIQ++FGDL                               L IKI
Sbjct: 478  PLAKTSTVGTLSEFQDIQSKFGDL-------------------------------LKIKI 506

Query: 822  EKSAKELSKLNSAWKPSEQDPDLEMITEEERQCLRKIALKMNSNLLLGRRGVFDGVLEGL 643
            EKSAKEL KLNS+ +P++QD D E ITEEER+CLR+I LK+NS L+LGRRGVFDGV+EG+
Sbjct: 507  EKSAKELEKLNSSCQPAQQDVDQEFITEEERECLRRIGLKLNSCLVLGRRGVFDGVIEGV 566

Query: 642  HQHWKHREVAKVITMQKLFAQVIFTAKSLVAESGGILISVDKLKEGHAIIIYRGKNYRRP 463
            HQHWKHREV K+ITMQ++F++VI+TAK LVAESGGIL+S++KLKEGHAII+YRGKNYRRP
Sbjct: 567  HQHWKHREVVKIITMQRVFSRVIYTAKMLVAESGGILVSIEKLKEGHAIIMYRGKNYRRP 626

Query: 462  SKLMTLNLLSKRQALKRSLEMQRLGSLKFFAYQRQRAISDLKIKFAELQESRQKNMKISA 283
             KLMT NLL++R+ALKRS+EMQR+GSLKFFAYQRQ+AI DLK+K A +Q     ++ +  
Sbjct: 627  PKLMTDNLLTRREALKRSIEMQRIGSLKFFAYQRQQAILDLKLKLALIQAYCVYSLSLRC 686

Query: 282  QTDLQLSNT 256
             T+  ++NT
Sbjct: 687  ATEKSIANT 695


>EOY04147.1 maize chloroplast splicing factor CRS1, putative isoform 5 [Theobroma
            cacao]
          Length = 788

 Score =  839 bits (2167), Expect = 0.0
 Identities = 444/727 (61%), Positives = 537/727 (73%), Gaps = 13/727 (1%)
 Frame = -1

Query: 2514 SSVNTNQNTPKTFKITNPV-------IKLSPNAPVNKMPTAPWMRSPVVLQPDEIINPSK 2356
            SS+N++QN  KT K    +       +   PN    KMPTAPWM+ P++LQP E++NPSK
Sbjct: 53   SSLNSSQNPSKTHKENRSLNNNSKFSVSKDPNNGPIKMPTAPWMKGPLLLQPHEVLNPSK 112

Query: 2355 PKTKKSFEKT----DKGLTAKESGVRGKKAMKRIIQNIENLQKDQILNDSQKKDLEKFEF 2188
              +KKS        DK L  KESGVRGKK MK+II+N+E LQ +++L D+Q    E+FE 
Sbjct: 113  STSKKSSNSKAKAPDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLEDTQIGIREEFEV 172

Query: 2187 RGCFEENGS-GEVDLKGGFGGKVPWVREE-RFVFRRMKKERVVTKAEMKXXXXXXXXXXX 2014
                EE GS GEV     F GK+PW+REE + VFRRMKKE+++T+AE+            
Sbjct: 173  GNWLEEFGSDGEVKR---FDGKMPWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRR 229

Query: 2013 XXXXXRKWVKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGL 1834
                 RKW+KV K GVT++VV EI+LAWR+NEL MVKF VPLCRNMDRAREI+E+KT GL
Sbjct: 230  KAMRMRKWIKVMKLGVTKAVVDEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGL 289

Query: 1833 VIWTKKDAHVIYRGDSYRFASKFSVKLRPRFADGREKPFLKSTHLDLENKVNSSCIKSNT 1654
            V+W KKDA V+YRG S+   SK S    PR ADG+E      +HL   N +N S  K N 
Sbjct: 290  VVWGKKDALVVYRGCSHGLTSKISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNG 349

Query: 1653 TTLDENMCLKVGEENSLPTSIFMDKIFRTKPIDRSLYEREGDRLLDGLGPRFVDWWMWKP 1474
            +TL   +  +  E+ S+P +IFM +    +P+  SLYERE DRLLDGLGPRF+DWWM KP
Sbjct: 350  STLQSGLYREDREKESMPINIFMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKP 409

Query: 1473 LPVDADLLSEVVPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQGL 1294
            LP+DADLL E VPGF+PP RLSPP+ R  LTDDEL YLRKL HPLP HF LG+NR LQGL
Sbjct: 410  LPIDADLLPEEVPGFRPPLRLSPPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGL 469

Query: 1293 AAAILKLWEKSLVAKIAVKWGIPNTDNEQMANELKRLTGGVLLLRNKFLIILYRGKDFLP 1114
            AAAILKLWEKSL+AKIA+KWGI NTDNEQMA ELK LTGGVLL+RNKFL+ILYRGKDFLP
Sbjct: 470  AAAILKLWEKSLIAKIAIKWGIQNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLP 529

Query: 1113 CGVENLIVERERELQICQLHEEGARLKAIETFCLPDEPPEETSRAGTLSEFQDIQTEFGD 934
             GV NL+VERE  L+ CQL+EEGAR+K  ET  + DEP  +TS  GTLSEF+DIQT FGD
Sbjct: 530  QGVANLVVEREMALRRCQLNEEGARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGD 589

Query: 933  LGMGNRXXXXXXXXXXXXXXXXLRKQERKLFILNIKIEKSAKELSKLNSAWKPSEQDPDL 754
            L   +                 LR QERKL ILNIKIEKSAKEL+KL S+ +P+EQD DL
Sbjct: 590  LKKESSELELQLEAQKENLERELRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDL 649

Query: 753  EMITEEERQCLRKIALKMNSNLLLGRRGVFDGVLEGLHQHWKHREVAKVITMQKLFAQVI 574
            E+ITEEER+CLRKI LK+NS L+LGRRGVF+GV+EG++QHWKHREV KVITMQ++FA+VI
Sbjct: 650  EIITEEERECLRKIGLKLNSFLVLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVI 709

Query: 573  FTAKSLVAESGGILISVDKLKEGHAIIIYRGKNYRRPSKLMTLNLLSKRQALKRSLEMQR 394
            +TAK LVAE+GGIL+SV+KLKEGHA+IIYRGKNYRRP KLMT NLL+KR+AL++S+E+QR
Sbjct: 710  YTAKFLVAETGGILVSVEKLKEGHALIIYRGKNYRRPLKLMTNNLLTKREALRQSIELQR 769

Query: 393  LGSLKFF 373
            +G   FF
Sbjct: 770  IGVSPFF 776


>XP_002516757.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Ricinus communis]
            XP_015573243.1 PREDICTED: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic isoform X1
            [Ricinus communis] XP_015573244.1 PREDICTED:
            chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Ricinus communis] EEF45655.1
            conserved hypothetical protein [Ricinus communis]
          Length = 742

 Score =  825 bits (2131), Expect = 0.0
 Identities = 460/760 (60%), Positives = 544/760 (71%), Gaps = 22/760 (2%)
 Frame = -1

Query: 2514 SSVNTNQNTPK--TFKITNPVIKLSPNAPVN---KMPTAPWMRSPVVLQPDEIINPSKPK 2350
            SS+N  QN PK  T K T   +   PN+  N   K+PTAPWM+ P++LQP E+IN SKP+
Sbjct: 26   SSLNNAQN-PKFATNKNTEFTLLSVPNSQSNAPIKVPTAPWMKGPLLLQPHELINLSKPR 84

Query: 2349 TKKS-----FEKTDKGLTAKESGVRGKKAMKRIIQNIENLQKDQILNDSQ---------K 2212
             K S      EK+DK LT KESGVRGKKAM++I+++IE LQ++Q L  +Q         +
Sbjct: 85   NKNSSNNANIEKSDKVLTGKESGVRGKKAMEKIVKSIEQLQENQALEKTQCDSQAYEKTQ 144

Query: 2211 KDLEKFEFR---GCFEENGSGEVDLKGGFGGKVPWVREERFVFRRMKKERVVTKAEMKXX 2041
             D E FE     G   E+G   V+ K       PW REE+FV+ R+KKE+ VTKAE+   
Sbjct: 145  LDSEAFEIGEKLGLIREHGDFGVNKK-----LKPWEREEKFVYWRIKKEKAVTKAELILE 199

Query: 2040 XXXXXXXXXXXXXXRKWVKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRARE 1861
                          RKWVKV KAGVT+SVV +IR AWR NELAMVKFD+PLCRNMDRARE
Sbjct: 200  KELLEILRTEASKMRKWVKVMKAGVTQSVVDQIRYAWRNNELAMVKFDLPLCRNMDRARE 259

Query: 1860 ILELKTGGLVIWTKKDAHVIYRGDSYRFASKFSVKLRPRFADGREKPFLKSTHLDLENKV 1681
            I+ELKTGGLV+WT+KD+ VIYRG +Y                       KS+H+      
Sbjct: 260  IVELKTGGLVVWTRKDSLVIYRGCNYHLT--------------------KSSHV------ 293

Query: 1680 NSSCIKSNTTTLDENMCLKVGEENSLPTSIFMDKIFRTKPIDRSLYEREGDRLLDGLGPR 1501
                     +T+DE +  K GEE  +PTSIF+     T  I+ SL+ERE DRLLDGLGPR
Sbjct: 294  ---------STMDEKIGSKDGEEEYIPTSIFIGDDANTPTINGSLFERETDRLLDGLGPR 344

Query: 1500 FVDWWMWKPLPVDADLLSEVVPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVL 1321
            FVDWWM KPLPVDADLL EVV GF PP R     AR+KL DDELTYLRKLA+ LPTHFVL
Sbjct: 345  FVDWWMRKPLPVDADLLPEVVAGFMPPSRFH--YARAKLKDDELTYLRKLAYALPTHFVL 402

Query: 1320 GRNRGLQGLAAAILKLWEKSLVAKIAVKWGIPNTDNEQMANELKRLTGGVLLLRNKFLII 1141
            GRNR LQGLAAAILKLWE+SL+AKIAVKWGIPNTDNEQMANELK LTGGVLLLRNKF II
Sbjct: 403  GRNRRLQGLAAAILKLWERSLIAKIAVKWGIPNTDNEQMANELKHLTGGVLLLRNKFFII 462

Query: 1140 LYRGKDFLPCGVENLIVERERELQICQLHEEGARLKAIETFCLPDEPPEETSRAGTLSEF 961
            L+RGKDFLPC V +L+V+RE EL+ICQL+EEGARLKAIET    DE   + ++ GTL+EF
Sbjct: 463  LFRGKDFLPCQVADLVVKRENELKICQLNEEGARLKAIETSFTDDELVVKATKIGTLNEF 522

Query: 960  QDIQTEFGDLGMGNRXXXXXXXXXXXXXXXXLRKQERKLFILNIKIEKSAKELSKLNSAW 781
            QDIQ  F +L  G R                LR QE KL IL  KIEKSA+ELSKLNSAW
Sbjct: 523  QDIQVRFKELAKGYRDSKLQLEAEKEKLERELRIQEHKLLILKSKIEKSARELSKLNSAW 582

Query: 780  KPSEQDPDLEMITEEERQCLRKIALKMNSNLLLGRRGVFDGVLEGLHQHWKHREVAKVIT 601
             P++QD DLEM+TEEER+CLRKI LKM S+LLLGRRGVFDGV+EGLHQHWKHREV KVI+
Sbjct: 583  APADQDADLEMMTEEERECLRKIGLKMRSSLLLGRRGVFDGVIEGLHQHWKHREVVKVIS 642

Query: 600  MQKLFAQVIFTAKSLVAESGGILISVDKLKEGHAIIIYRGKNYRRPSKLMTLNLLSKRQA 421
            +Q++FAQVI TAK L AE+GGIL+S+DKLKEGHAIIIYRGKNYRRP +L+  NLL+KR+A
Sbjct: 643  LQRMFAQVIRTAKFLEAETGGILVSIDKLKEGHAIIIYRGKNYRRPQRLLN-NLLTKRKA 701

Query: 420  LKRSLEMQRLGSLKFFAYQRQRAISDLKIKFAELQESRQK 301
            L RSLEMQR+GSL+FFAYQRQ +I +LK + A+LQES ++
Sbjct: 702  LCRSLEMQRIGSLRFFAYQRQHSIRELKFQLAQLQESEER 741


>XP_018805818.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Juglans regia]
          Length = 772

 Score =  818 bits (2113), Expect = 0.0
 Identities = 435/756 (57%), Positives = 539/756 (71%), Gaps = 18/756 (2%)
 Frame = -1

Query: 2520 ICSSVNTNQ-NTPKTFKITNPVIKLSPNAPVN------------KMPTAPWMRSPVVLQP 2380
            I SS+N     TPK    +NP I  +P   ++            KMPTAPWM  P++L P
Sbjct: 16   ISSSLNPKPPQTPKHTPSSNPTIANNPEFSLSLKQPLSQSDAAVKMPTAPWMNGPLLLPP 75

Query: 2379 DEIINPSKPKTKKSF-----EKTDKGLTAKESGVRGKKAMKRIIQNIENLQKDQILNDSQ 2215
             E+++ SKP +KK+      EK+DK LT K  GVRG++A+ +I+++IE L+ ++  +++Q
Sbjct: 76   HELLDLSKPNSKKNLNNARVEKSDKALTEK-IGVRGERAVNKIVRSIEKLRMNEDSDETQ 134

Query: 2214 KKDLEKFEFRGCFEENGSGEVDLKGGFGGKVPWVREERFVFRRMKKERVVTKAEMKXXXX 2035
            K D  KF F  C E+ G    D    +G K+PW R+  F  RRMKKE+ VT+AE+K    
Sbjct: 135  K-DSGKFGFGDCLEQLGE---DDGSRYGRKMPWERDVGFALRRMKKEKAVTEAELKLDKA 190

Query: 2034 XXXXXXXXXXXXRKWVKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREIL 1855
                        R+WVKVKKAGVT+ VV EIR  WRRNELAM+KFD+PLC+N+DRAREI+
Sbjct: 191  LLERLRGEAARMRRWVKVKKAGVTQGVVDEIRTIWRRNELAMLKFDIPLCKNLDRAREIV 250

Query: 1854 ELKTGGLVIWTKKDAHVIYRGDSYRFASKFSVKLRPRFADGREKPFLKSTHLDLENKVNS 1675
            E+KTGGLV+W++KD  V+YRG S++  SK  +K R R A  +  P+ ++     E     
Sbjct: 251  EIKTGGLVVWSQKDTLVVYRGCSHQPTSKNILKTRARLAGSQAAPYYETGLPKWERNYEI 310

Query: 1674 SCIKSNTTTLDENMCLKVGEENSLPTSIFMDKIFRTKPIDRSLYEREGDRLLDGLGPRFV 1495
            S   SN   +DE MC    E  +LP  I        +P+  SLY RE +RLLDGLGPR++
Sbjct: 311  SLPNSNENGVDEKMCRSESEGANLPPGISSKGDLNYQPVSGSLYVRETERLLDGLGPRYL 370

Query: 1494 DWWMWKPLPVDADLLSEVVPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGR 1315
            DWWM KPLPVDADLL EVVPG++PPFRL PP AR+KLT+DELTYLRKLAHPLPTHFVLG+
Sbjct: 371  DWWMDKPLPVDADLLPEVVPGYRPPFRLCPPRARAKLTNDELTYLRKLAHPLPTHFVLGK 430

Query: 1314 NRGLQGLAAAILKLWEKSLVAKIAVKWGIPNTDNEQMANELKRLTGGVLLLRNKFLIILY 1135
            NR LQGL+A+ILKLWEKSL+ KI++KWG+PN +NE++A ELK LTGGVLLLRNKFLIILY
Sbjct: 431  NRKLQGLSASILKLWEKSLIVKISLKWGVPNMNNEEVALELKHLTGGVLLLRNKFLIILY 490

Query: 1134 RGKDFLPCGVENLIVERERELQICQLHEEGARLKAIETFCLPDEPPEETSRAGTLSEFQD 955
            RGKDFLP  V NLI ERE EL+  QLHEEGAR+KAIE  C+ +   E TS +GTLSE + 
Sbjct: 491  RGKDFLPHRVANLIAERETELKKYQLHEEGARVKAIEAVCMDNGSTENTSSSGTLSESKY 550

Query: 954  IQTEFGDLGMGNRXXXXXXXXXXXXXXXXLRKQERKLFILNIKIEKSAKELSKLNSAWKP 775
            IQTEF DL +GN                 LR+QERKLFILNIKI+KS K+LSKL   W P
Sbjct: 551  IQTEFSDLEIGNTEVDIKLEAEKQRLERELREQERKLFILNIKIDKSTKKLSKLTGGWAP 610

Query: 774  SEQDPDLEMITEEERQCLRKIALKMNSNLLLGRRGVFDGVLEGLHQHWKHREVAKVITMQ 595
            +E D D EMITEEER+C +KI LKM+  L LGRRGVFDGV+EGLHQHWK+REV KVIT Q
Sbjct: 611  TEMDADREMITEEERECFQKIGLKMDRCLELGRRGVFDGVIEGLHQHWKYREVVKVITKQ 670

Query: 594  KLFAQVIFTAKSLVAESGGILISVDKLKEGHAIIIYRGKNYRRPSKLMTLNLLSKRQALK 415
            +LF QV++TAK L AESGG+L+SV KLKEGHAII+YRGKNYRRP K +  NLL+KR+AL 
Sbjct: 671  RLFQQVVYTAKFLEAESGGVLVSVKKLKEGHAIILYRGKNYRRPLKRVPENLLTKREALH 730

Query: 414  RSLEMQRLGSLKFFAYQRQRAISDLKIKFAELQESR 307
            +SLEMQR+GSLKFFAYQRQ+AI DLK K  +LQ+S+
Sbjct: 731  KSLEMQRIGSLKFFAYQRQQAIMDLKCKLEDLQQSK 766


>XP_016696534.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Gossypium hirsutum]
          Length = 737

 Score =  814 bits (2102), Expect = 0.0
 Identities = 448/748 (59%), Positives = 537/748 (71%), Gaps = 14/748 (1%)
 Frame = -1

Query: 2514 SSVNTNQNTPKTFKITNP--------VIKLSPNAPVNKMPTAPWMRSPVVLQPDEIINPS 2359
            SS N+ QN  KT K  +         V K   N P+ KMPT PWM+ P++LQPDE++N S
Sbjct: 14   SSFNSTQNPSKTQKGNHSFNKNSKFSVSKTHRNGPI-KMPTPPWMKGPLLLQPDEVLNAS 72

Query: 2358 KPKTKKSFEKT----DKGLTAKESGVRGKKAMKRIIQNIENLQKDQILNDSQKKDLEKFE 2191
            KP TK+S        +K L  KESGVRGKK MK+II+++E LQ +  L+D+Q    E+FE
Sbjct: 73   KPTTKRSSNNNSKAPEKALFGKESGVRGKKVMKKIIRDVEKLQGNGALDDTQIGKFEEFE 132

Query: 2190 FRGCFEENGS-GEVDLKGGFGGKVPWVREE-RFVFRRMKKERVVTKAEMKXXXXXXXXXX 2017
                 EE GS GEV     F  K+PWVREE + VFRRMKKE+V+T+AE+           
Sbjct: 133  IGNWLEEIGSDGEVKK---FDRKMPWVREEEKVVFRRMKKEKVLTQAEIILDNDLLERLR 189

Query: 2016 XXXXXXRKWVKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGG 1837
                  RKWVKV KAGVT+ VV EIRLAW  NEL M+KF VPLCRNMDRA EI+E+KTGG
Sbjct: 190  KKATRMRKWVKVMKAGVTQDVVDEIRLAWGNNELVMLKFGVPLCRNMDRASEIVEMKTGG 249

Query: 1836 LVIWTKKDAHVIYRGDSYRFASKFSVKLRPRFADGREKPFLKSTHLDLENKVNSSCIKSN 1657
            LV+W KKD  V+YRG ++   S              ++ F    +L  +N    S  KSN
Sbjct: 250  LVVWCKKDILVVYRGQNHWLTSN------------GQRVF---NNLASDNNTTMSPEKSN 294

Query: 1656 TTTLDENMCLKVGEENSLPTSIFMDKIFRTKPIDRSLYEREGDRLLDGLGPRFVDWWMWK 1477
             +T   ++  +  +EN+             +P+  SLYERE DRLLDGLGPRF+DWWM K
Sbjct: 295  ASTWGRSLNGEDRDENN-------------QPVVGSLYERETDRLLDGLGPRFIDWWMRK 341

Query: 1476 PLPVDADLLSEVVPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQG 1297
            PLPVDADLL EVVPGFKPP RLSPP  R KLTD+ELT LRKLAHPLP HFVLGRNR LQG
Sbjct: 342  PLPVDADLLPEVVPGFKPPTRLSPPKTRPKLTDEELTNLRKLAHPLPFHFVLGRNRNLQG 401

Query: 1296 LAAAILKLWEKSLVAKIAVKWGIPNTDNEQMANELKRLTGGVLLLRNKFLIILYRGKDFL 1117
            LA +ILKLWEKSL+AKIA+KWG+ NTDNEQMANELK LTGGVLLLRNKFLII YRGKDFL
Sbjct: 402  LANSILKLWEKSLIAKIAIKWGVQNTDNEQMANELKDLTGGVLLLRNKFLIIFYRGKDFL 461

Query: 1116 PCGVENLIVERERELQICQLHEEGARLKAIETFCLPDEPPEETSRAGTLSEFQDIQTEFG 937
            P GV N ++ERE  L+ CQL EEGAR+K  ETF + +E   +TS  GTL+EFQDIQT++G
Sbjct: 462  PQGVANSVMEREMALRRCQLIEEGARVKVAETFQVANESLAKTSTVGTLAEFQDIQTKYG 521

Query: 936  DLGMGNRXXXXXXXXXXXXXXXXLRKQERKLFILNIKIEKSAKELSKLNSAWKPSEQDPD 757
             L   N                 LR QERKL ILN KIEKSAK+L+KLNS+W+ +E D D
Sbjct: 522  VLEKENNELEIQIEAQKENLERELRNQERKLAILNGKIEKSAKKLAKLNSSWQTAEPDLD 581

Query: 756  LEMITEEERQCLRKIALKMNSNLLLGRRGVFDGVLEGLHQHWKHREVAKVITMQKLFAQV 577
            LE ITEEER+CLRKI LK++S L+LGRRGVF+GV+EG+HQHWKHREV KVITMQ+ F +V
Sbjct: 582  LETITEEERECLRKIGLKLSSCLVLGRRGVFNGVIEGVHQHWKHREVVKVITMQRAFLRV 641

Query: 576  IFTAKSLVAESGGILISVDKLKEGHAIIIYRGKNYRRPSKLMTLNLLSKRQALKRSLEMQ 397
            I+TAK LVAESGGIL+SV+KLKEGHAIIIYRGKNYRRPSKLMT +LL+KR+AL+RS+E+Q
Sbjct: 642  IYTAKMLVAESGGILVSVEKLKEGHAIIIYRGKNYRRPSKLMTDHLLTKREALQRSIELQ 701

Query: 396  RLGSLKFFAYQRQRAISDLKIKFAELQE 313
            R+GSLKFFAYQR++AI DLK+K A+L+E
Sbjct: 702  RIGSLKFFAYQRRQAILDLKLKLAKLEE 729


>KHG25518.1 hypothetical protein F383_03195 [Gossypium arboreum]
          Length = 737

 Score =  813 bits (2101), Expect = 0.0
 Identities = 448/748 (59%), Positives = 537/748 (71%), Gaps = 14/748 (1%)
 Frame = -1

Query: 2514 SSVNTNQNTPKTFKITNP--------VIKLSPNAPVNKMPTAPWMRSPVVLQPDEIINPS 2359
            SS N+ QN  KT K  +         V K   N P+ KMPT PWM+ P++LQPDE++N S
Sbjct: 14   SSFNSTQNPSKTQKGNHSFNKNSKFSVSKTHRNGPI-KMPTPPWMKGPLLLQPDEVLNAS 72

Query: 2358 KPKTKKSFEKT----DKGLTAKESGVRGKKAMKRIIQNIENLQKDQILNDSQKKDLEKFE 2191
            KP TK+S        +K L  KESGVRGKK MK+II+++E LQ +  L+D+Q    E+FE
Sbjct: 73   KPTTKRSSNNNSKAPEKALFGKESGVRGKKVMKKIIRDVEKLQGNGALDDTQIGKFEEFE 132

Query: 2190 FRGCFEENGS-GEVDLKGGFGGKVPWVREE-RFVFRRMKKERVVTKAEMKXXXXXXXXXX 2017
                 EE GS GEV     F  K+PWVREE + VFRRMKKE+V+T+AE+           
Sbjct: 133  IGNWLEEIGSDGEVKK---FDRKMPWVREEEKVVFRRMKKEKVLTQAEIILDNDLLERLR 189

Query: 2016 XXXXXXRKWVKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGG 1837
                  RKWVKV KAGVT+ VV EIRLAW  NEL M+KF VPLCRNMDRA EI+E+KTGG
Sbjct: 190  KKATRMRKWVKVMKAGVTQDVVDEIRLAWGNNELVMLKFGVPLCRNMDRASEIVEMKTGG 249

Query: 1836 LVIWTKKDAHVIYRGDSYRFASKFSVKLRPRFADGREKPFLKSTHLDLENKVNSSCIKSN 1657
            LV+W KKD  V+YRG ++   S              ++ F    +L  +N    S  KSN
Sbjct: 250  LVVWCKKDILVVYRGQNHWLTSN------------GQRVF---NNLASDNNTTMSPEKSN 294

Query: 1656 TTTLDENMCLKVGEENSLPTSIFMDKIFRTKPIDRSLYEREGDRLLDGLGPRFVDWWMWK 1477
             +T   ++  +  +EN+             +P+  SLYERE DRLLDGLGPRF+DWWM K
Sbjct: 295  ASTWRRSLNGEDRDENN-------------QPVVGSLYERETDRLLDGLGPRFIDWWMRK 341

Query: 1476 PLPVDADLLSEVVPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQG 1297
            PLPVDADLL EVVPGFKPP RLSPP  R KLTD+ELT LRKLAHPLP HFVLGRNR LQG
Sbjct: 342  PLPVDADLLPEVVPGFKPPTRLSPPKTRPKLTDEELTNLRKLAHPLPFHFVLGRNRNLQG 401

Query: 1296 LAAAILKLWEKSLVAKIAVKWGIPNTDNEQMANELKRLTGGVLLLRNKFLIILYRGKDFL 1117
            LA +ILKLWEKSL+AKIA+KWG+ NTDNEQMANELK LTGGVLLLRNKFLII YRGKDFL
Sbjct: 402  LANSILKLWEKSLIAKIAIKWGVQNTDNEQMANELKDLTGGVLLLRNKFLIIFYRGKDFL 461

Query: 1116 PCGVENLIVERERELQICQLHEEGARLKAIETFCLPDEPPEETSRAGTLSEFQDIQTEFG 937
            P GV N ++ERE  L+ CQL EEGAR+K  ETF + +E   +TS  GTL+EFQDIQT++G
Sbjct: 462  PQGVANSVMEREMALRRCQLIEEGARVKVAETFQVANESLAKTSTVGTLAEFQDIQTKYG 521

Query: 936  DLGMGNRXXXXXXXXXXXXXXXXLRKQERKLFILNIKIEKSAKELSKLNSAWKPSEQDPD 757
             L   N                 LR QERKL ILN KIEKSAK+L+KLNS+W+ +E D D
Sbjct: 522  VLEKENNELEIQIEAQKENLERELRNQERKLAILNGKIEKSAKKLAKLNSSWQTAEPDLD 581

Query: 756  LEMITEEERQCLRKIALKMNSNLLLGRRGVFDGVLEGLHQHWKHREVAKVITMQKLFAQV 577
            LE ITEEER+CLRKI LK++S L+LGRRGVF+GV+EG+HQHWKHREV KVITMQ+ F +V
Sbjct: 582  LETITEEERECLRKIGLKLSSCLVLGRRGVFNGVIEGVHQHWKHREVVKVITMQRAFLRV 641

Query: 576  IFTAKSLVAESGGILISVDKLKEGHAIIIYRGKNYRRPSKLMTLNLLSKRQALKRSLEMQ 397
            I+TAK LVAESGGIL+SV+KLKEGHAIIIYRGKNYRRPSKLMT +LL+KR+AL+RS+E+Q
Sbjct: 642  IYTAKMLVAESGGILVSVEKLKEGHAIIIYRGKNYRRPSKLMTDHLLTKREALQRSIELQ 701

Query: 396  RLGSLKFFAYQRQRAISDLKIKFAELQE 313
            R+GSLKFFAYQR++AI DLK+K A+L+E
Sbjct: 702  RIGSLKFFAYQRRQAILDLKLKLAKLEE 729


>XP_017627144.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Gossypium arboreum]
            XP_017627145.1 PREDICTED: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic isoform X1
            [Gossypium arboreum]
          Length = 737

 Score =  812 bits (2098), Expect = 0.0
 Identities = 447/748 (59%), Positives = 537/748 (71%), Gaps = 14/748 (1%)
 Frame = -1

Query: 2514 SSVNTNQNTPKTFKITNP--------VIKLSPNAPVNKMPTAPWMRSPVVLQPDEIINPS 2359
            SS N+ QN  KT K  +         V K   N P+ KMPT PWM+ P++LQPDE++N S
Sbjct: 14   SSFNSTQNPSKTQKGNHSFNKNSKFSVSKTHRNGPI-KMPTPPWMKGPLLLQPDEVLNAS 72

Query: 2358 KPKTKKSFEKT----DKGLTAKESGVRGKKAMKRIIQNIENLQKDQILNDSQKKDLEKFE 2191
            KP TK+S        +K L  KESGVRGKK MK+II+++E LQ +  L+D+Q    E+FE
Sbjct: 73   KPTTKRSSNNNSKAPEKALFGKESGVRGKKVMKKIIRDVEKLQGNGALDDTQIGKFEEFE 132

Query: 2190 FRGCFEENGS-GEVDLKGGFGGKVPWVREE-RFVFRRMKKERVVTKAEMKXXXXXXXXXX 2017
                 EE GS GEV     F  K+PWVREE + VFRRMKKE+V+T+AE+           
Sbjct: 133  IGNWLEEIGSDGEVKK---FDRKMPWVREEEKVVFRRMKKEKVLTQAEIILDNDLLERLR 189

Query: 2016 XXXXXXRKWVKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGG 1837
                  RKWVKV KAGVT+ VV EIRLAW  NEL M+KF VPLCRNMDRA EI+E+KTGG
Sbjct: 190  KKATRMRKWVKVMKAGVTQDVVDEIRLAWGNNELVMLKFGVPLCRNMDRASEIVEMKTGG 249

Query: 1836 LVIWTKKDAHVIYRGDSYRFASKFSVKLRPRFADGREKPFLKSTHLDLENKVNSSCIKSN 1657
            LV+W KKD  V+YRG ++   S              ++ F    +L  +N    S  KSN
Sbjct: 250  LVVWCKKDILVVYRGQNHWLTSN------------GQRVF---NNLASDNNTTMSPEKSN 294

Query: 1656 TTTLDENMCLKVGEENSLPTSIFMDKIFRTKPIDRSLYEREGDRLLDGLGPRFVDWWMWK 1477
             +T   ++  +  +EN+             +P+  SLYERE DRLLDGLGPRF+DWWM K
Sbjct: 295  ASTWRRSLNGEDRDENN-------------QPVVGSLYERETDRLLDGLGPRFIDWWMRK 341

Query: 1476 PLPVDADLLSEVVPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQG 1297
            PLPVDADLL EVVPGFKPP RLSPP  R KLTD+ELT LRKLAHPLP HFVLGRNR LQG
Sbjct: 342  PLPVDADLLPEVVPGFKPPTRLSPPKTRPKLTDEELTNLRKLAHPLPFHFVLGRNRNLQG 401

Query: 1296 LAAAILKLWEKSLVAKIAVKWGIPNTDNEQMANELKRLTGGVLLLRNKFLIILYRGKDFL 1117
            LA +ILKLWEKSL+AKIA+KWG+ NTDNEQMANELK LTGGVLLLRNKFLII YRGKDFL
Sbjct: 402  LANSILKLWEKSLIAKIAIKWGVQNTDNEQMANELKDLTGGVLLLRNKFLIIFYRGKDFL 461

Query: 1116 PCGVENLIVERERELQICQLHEEGARLKAIETFCLPDEPPEETSRAGTLSEFQDIQTEFG 937
            P GV N ++ERE  L+ CQL EEGAR+K  ETF + ++   +TS  GTL+EFQDIQT++G
Sbjct: 462  PQGVANSVMEREMALRRCQLIEEGARVKVAETFQVANDSLAKTSTVGTLAEFQDIQTKYG 521

Query: 936  DLGMGNRXXXXXXXXXXXXXXXXLRKQERKLFILNIKIEKSAKELSKLNSAWKPSEQDPD 757
             L   N                 LR QERKL ILN KIEKSAK+L+KLNS+W+ +E D D
Sbjct: 522  VLEKENNELEIQIEAQKENLERELRNQERKLAILNGKIEKSAKKLAKLNSSWQTAEPDLD 581

Query: 756  LEMITEEERQCLRKIALKMNSNLLLGRRGVFDGVLEGLHQHWKHREVAKVITMQKLFAQV 577
            LE ITEEER+CLRKI LK++S L+LGRRGVF+GV+EG+HQHWKHREV KVITMQ+ F +V
Sbjct: 582  LETITEEERECLRKIGLKLSSCLVLGRRGVFNGVIEGVHQHWKHREVVKVITMQRAFLRV 641

Query: 576  IFTAKSLVAESGGILISVDKLKEGHAIIIYRGKNYRRPSKLMTLNLLSKRQALKRSLEMQ 397
            I+TAK LVAESGGIL+SV+KLKEGHAIIIYRGKNYRRPSKLMT +LL+KR+AL+RS+E+Q
Sbjct: 642  IYTAKMLVAESGGILVSVEKLKEGHAIIIYRGKNYRRPSKLMTDHLLTKREALQRSIELQ 701

Query: 396  RLGSLKFFAYQRQRAISDLKIKFAELQE 313
            R+GSLKFFAYQR++AI DLK+K A+L+E
Sbjct: 702  RIGSLKFFAYQRRQAILDLKLKLAKLEE 729