BLASTX nr result
ID: Phellodendron21_contig00021461
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00021461
(895 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KDO63581.1 hypothetical protein CISIN_1g0005253mg, partial [Citr... 515 e-175
XP_006477376.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 516 e-169
XP_006440521.1 hypothetical protein CICLE_v10018489mg [Citrus cl... 513 e-168
KDP25521.1 hypothetical protein JCGZ_20677 [Jatropha curcas] 413 e-134
XP_012087018.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 413 e-130
EEF51083.1 DNA-directed RNA polymerase, putative [Ricinus communis] 410 e-129
XP_015576105.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 410 e-129
XP_018820498.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 405 e-127
XP_018820497.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 405 e-127
GAV79426.1 RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1... 404 e-127
OMP09641.1 RNA polymerase, alpha subunit [Corchorus olitorius] 403 e-127
XP_016717099.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 399 e-126
XP_017973942.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 395 e-125
XP_012476049.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 397 e-125
OMO79420.1 RNA polymerase, alpha subunit [Corchorus capsularis] 399 e-125
EOY24612.1 DNA-directed RNA polymerase II subunit RPB1-B, putati... 399 e-125
XP_012476048.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 397 e-125
XP_016717097.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 399 e-125
XP_017973941.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 395 e-124
KJB25756.1 hypothetical protein B456_004G207300 [Gossypium raimo... 397 e-124
>KDO63581.1 hypothetical protein CISIN_1g0005253mg, partial [Citrus sinensis]
Length = 825
Score = 515 bits (1326), Expect = e-175
Identities = 255/298 (85%), Positives = 273/298 (91%)
Frame = -2
Query: 894 GELISAEGSAWLRDNEGNIFQYLIKHCQDKVLDFLYAAQELLCEWLSVTGMSVXXXXXXX 715
G+LISAEGS+WLRD EGN+FQYLIK +DKVLDFLYAAQE+LCEWLSV GM+V
Sbjct: 372 GKLISAEGSSWLRDYEGNLFQYLIKRYRDKVLDFLYAAQEVLCEWLSVRGMTVSLSDLYL 431
Query: 714 XXXXXSRQILMDEIFHGLREAQDSCNFRQLMVDSHKNFLMRAEDSESTLSFQAQYLSYEK 535
SR+ILMDEIF+GLREAQD+CNF+QLMVDSH NFLM A+DSEST S Q ++LSYEK
Sbjct: 432 ASHSCSRKILMDEIFYGLREAQDTCNFQQLMVDSHMNFLMSAKDSESTRSLQGEHLSYEK 491
Query: 534 QRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQ 355
QRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQ
Sbjct: 492 QRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQ 551
Query: 354 HSLAPLSFRFPHELSCTAWNILRSGDDTECAKSYIPSAVVENSFLSGLNPLECFVHSVTS 175
HSLAPLSFRFPHELSC AWN LR+GD+TECAKSYIPSAVVENSFL+GLNPLECF+HSVTS
Sbjct: 552 HSLAPLSFRFPHELSCAAWNRLRAGDNTECAKSYIPSAVVENSFLTGLNPLECFIHSVTS 611
Query: 174 RDSSFSDNADLPGTLTRRLMFFMRDLYTAYDGTVRNAYGNQLVQFSYNIEGTSAPTGE 1
RDSSFSDNADLPGTLTRRLMFFMRDL TAYDGTVRNAYGNQ+VQFSYNIEGTS PTGE
Sbjct: 612 RDSSFSDNADLPGTLTRRLMFFMRDLCTAYDGTVRNAYGNQIVQFSYNIEGTSTPTGE 669
>XP_006477376.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Citrus sinensis]
XP_006477377.1 PREDICTED: DNA-directed RNA polymerase IV
subunit 1 [Citrus sinensis] XP_006477378.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Citrus
sinensis] XP_015385387.1 PREDICTED: DNA-directed RNA
polymerase IV subunit 1 [Citrus sinensis]
Length = 1443
Score = 516 bits (1328), Expect = e-169
Identities = 256/298 (85%), Positives = 272/298 (91%)
Frame = -2
Query: 894 GELISAEGSAWLRDNEGNIFQYLIKHCQDKVLDFLYAAQELLCEWLSVTGMSVXXXXXXX 715
G+LISAEGS+WLRD EGN+FQYLIK QDKVLDFLYAAQE+LCEWLSV GM+V
Sbjct: 570 GKLISAEGSSWLRDYEGNLFQYLIKRYQDKVLDFLYAAQEVLCEWLSVRGMTVSLSDLYL 629
Query: 714 XXXXXSRQILMDEIFHGLREAQDSCNFRQLMVDSHKNFLMRAEDSESTLSFQAQYLSYEK 535
SR+ILMDEIF+GLREAQD+CNF+QLMVDSH NFLM AEDSEST S Q ++LSYEK
Sbjct: 630 ASHSCSRKILMDEIFYGLREAQDTCNFQQLMVDSHMNFLMSAEDSESTRSLQGEHLSYEK 689
Query: 534 QRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQ 355
QRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQ
Sbjct: 690 QRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQ 749
Query: 354 HSLAPLSFRFPHELSCTAWNILRSGDDTECAKSYIPSAVVENSFLSGLNPLECFVHSVTS 175
HSLAPLSFRFPHELSC AWN LR+GD+TECAKSYIPSAVV NSFL+GLNPLECF+HSVTS
Sbjct: 750 HSLAPLSFRFPHELSCAAWNRLRAGDNTECAKSYIPSAVVANSFLTGLNPLECFIHSVTS 809
Query: 174 RDSSFSDNADLPGTLTRRLMFFMRDLYTAYDGTVRNAYGNQLVQFSYNIEGTSAPTGE 1
RDSSFSDNADLPGTLTRRLMFFMRDL TAYDGTVRNAYGNQ+VQFSYNIEGTS PTGE
Sbjct: 810 RDSSFSDNADLPGTLTRRLMFFMRDLCTAYDGTVRNAYGNQIVQFSYNIEGTSTPTGE 867
>XP_006440521.1 hypothetical protein CICLE_v10018489mg [Citrus clementina] ESR53761.1
hypothetical protein CICLE_v10018489mg [Citrus
clementina]
Length = 1443
Score = 513 bits (1322), Expect = e-168
Identities = 254/298 (85%), Positives = 272/298 (91%)
Frame = -2
Query: 894 GELISAEGSAWLRDNEGNIFQYLIKHCQDKVLDFLYAAQELLCEWLSVTGMSVXXXXXXX 715
G+LISAEGS+WLRD EGN+FQYLIK +DKVLDFLYAAQE+LCEWLSV GM+V
Sbjct: 570 GKLISAEGSSWLRDYEGNLFQYLIKRYRDKVLDFLYAAQEVLCEWLSVRGMTVSLSDLYL 629
Query: 714 XXXXXSRQILMDEIFHGLREAQDSCNFRQLMVDSHKNFLMRAEDSESTLSFQAQYLSYEK 535
SR+ILMDEIF+GLREAQD+CNF+QLMVDSH NFLM A+DSEST S Q ++LSYEK
Sbjct: 630 ASHSCSRKILMDEIFYGLREAQDTCNFQQLMVDSHMNFLMSAKDSESTRSLQGEHLSYEK 689
Query: 534 QRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQ 355
QRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLL MFKAGSKGNLLKLVQHSLCLGLQ
Sbjct: 690 QRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLGMFKAGSKGNLLKLVQHSLCLGLQ 749
Query: 354 HSLAPLSFRFPHELSCTAWNILRSGDDTECAKSYIPSAVVENSFLSGLNPLECFVHSVTS 175
HSLAPLSFRFPHELSC AWN LR+GD+TECAKSYIPSAVVENSFL+GLNPLECF+HSVTS
Sbjct: 750 HSLAPLSFRFPHELSCAAWNRLRAGDNTECAKSYIPSAVVENSFLTGLNPLECFIHSVTS 809
Query: 174 RDSSFSDNADLPGTLTRRLMFFMRDLYTAYDGTVRNAYGNQLVQFSYNIEGTSAPTGE 1
RDSSFSDNADLPGTLTRRLMFFMRDL TAYDGTVRNAYGNQ+VQFSYNIEGTS PTGE
Sbjct: 810 RDSSFSDNADLPGTLTRRLMFFMRDLCTAYDGTVRNAYGNQIVQFSYNIEGTSTPTGE 867
>KDP25521.1 hypothetical protein JCGZ_20677 [Jatropha curcas]
Length = 942
Score = 413 bits (1061), Expect = e-134
Identities = 207/298 (69%), Positives = 240/298 (80%), Gaps = 2/298 (0%)
Frame = -2
Query: 894 GELISAEGSAWLRDNEGNIFQYLIKHCQDKVLDFLYAAQELLCEWLSVTGMSVXXXXXXX 715
GELIS+EGS WLRD +GN+FQ LIKHCQ +VLDFL AQE+LCEWLS+ G+SV
Sbjct: 67 GELISSEGSFWLRDTDGNLFQSLIKHCQSQVLDFLCTAQEVLCEWLSMRGLSVSLSDLYL 126
Query: 714 XXXXXSRQILMDEIFHGLREAQDSCNFRQLMVDSHKNFLM-RAEDSESTLSFQAQYLSYE 538
+ + +M E+ +GL++A +CN +Q MVDS ++FL ED E + ++L YE
Sbjct: 127 CPDSYAWKNMMCEVSYGLQDADHTCNIKQFMVDSCRDFLAGNGEDDEHPMGLDVEHLCYE 186
Query: 537 KQRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGL 358
KQRSAALSQASVDAFKHVF DIQ LAYKY SKDN+L+ MFKAGSKGNLLKLVQHS+CLGL
Sbjct: 187 KQRSAALSQASVDAFKHVFRDIQILAYKYASKDNALMTMFKAGSKGNLLKLVQHSMCLGL 246
Query: 357 QHSLAPLSFRFPHELSCTAWNILRSGDDTECAKSYIPSAVVENSFLSGLNPLECFVHSVT 178
QHSL PLSFR PH+LSC AWN + + TECAK YIPSAVV++SFL+GLNPLECFVHSVT
Sbjct: 247 QHSLVPLSFRMPHQLSCDAWNKQKDDNATECAKCYIPSAVVKSSFLTGLNPLECFVHSVT 306
Query: 177 SRDSSFSDNADLPGTLTRRLMFFMRDLYTAYDGTVRNAYGNQLVQFS-YNIEGTSAPT 7
SRDSSFSDNADLPGTLTRRLMFFMRD++ AYDGT+RNAYGNQLVQFS YN E TS PT
Sbjct: 307 SRDSSFSDNADLPGTLTRRLMFFMRDIHAAYDGTIRNAYGNQLVQFSYYNREETSCPT 364
>XP_012087018.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Jatropha curcas]
Length = 1453
Score = 413 bits (1061), Expect = e-130
Identities = 207/298 (69%), Positives = 240/298 (80%), Gaps = 2/298 (0%)
Frame = -2
Query: 894 GELISAEGSAWLRDNEGNIFQYLIKHCQDKVLDFLYAAQELLCEWLSVTGMSVXXXXXXX 715
GELIS+EGS WLRD +GN+FQ LIKHCQ +VLDFL AQE+LCEWLS+ G+SV
Sbjct: 578 GELISSEGSFWLRDTDGNLFQSLIKHCQSQVLDFLCTAQEVLCEWLSMRGLSVSLSDLYL 637
Query: 714 XXXXXSRQILMDEIFHGLREAQDSCNFRQLMVDSHKNFLM-RAEDSESTLSFQAQYLSYE 538
+ + +M E+ +GL++A +CN +Q MVDS ++FL ED E + ++L YE
Sbjct: 638 CPDSYAWKNMMCEVSYGLQDADHTCNIKQFMVDSCRDFLAGNGEDDEHPMGLDVEHLCYE 697
Query: 537 KQRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGL 358
KQRSAALSQASVDAFKHVF DIQ LAYKY SKDN+L+ MFKAGSKGNLLKLVQHS+CLGL
Sbjct: 698 KQRSAALSQASVDAFKHVFRDIQILAYKYASKDNALMTMFKAGSKGNLLKLVQHSMCLGL 757
Query: 357 QHSLAPLSFRFPHELSCTAWNILRSGDDTECAKSYIPSAVVENSFLSGLNPLECFVHSVT 178
QHSL PLSFR PH+LSC AWN + + TECAK YIPSAVV++SFL+GLNPLECFVHSVT
Sbjct: 758 QHSLVPLSFRMPHQLSCDAWNKQKDDNATECAKCYIPSAVVKSSFLTGLNPLECFVHSVT 817
Query: 177 SRDSSFSDNADLPGTLTRRLMFFMRDLYTAYDGTVRNAYGNQLVQFS-YNIEGTSAPT 7
SRDSSFSDNADLPGTLTRRLMFFMRD++ AYDGT+RNAYGNQLVQFS YN E TS PT
Sbjct: 818 SRDSSFSDNADLPGTLTRRLMFFMRDIHAAYDGTIRNAYGNQLVQFSYYNREETSCPT 875
>EEF51083.1 DNA-directed RNA polymerase, putative [Ricinus communis]
Length = 1475
Score = 410 bits (1054), Expect = e-129
Identities = 204/298 (68%), Positives = 245/298 (82%), Gaps = 2/298 (0%)
Frame = -2
Query: 894 GELISAEGSAWLRDNEGNIFQYLIKHCQDKVLDFLYAAQELLCEWLSVTGMSVXXXXXXX 715
GELIS+EGS WLRD +GN+FQ LIK CQD+VLDFLY AQE+LCEWLS+ G+SV
Sbjct: 575 GELISSEGSFWLRDTDGNLFQSLIKQCQDQVLDFLYIAQEVLCEWLSMRGLSVSLSDLYL 634
Query: 714 XXXXXSRQILMDEIFHGLREAQDSCNFRQLMVDSHKNFLMRA-EDSESTLSFQAQYLSYE 538
SR+ +MDE+ GL++A+ +CN +Q MVDS ++FL ED + +++F ++L +E
Sbjct: 635 CPDSDSRENMMDEVLFGLQDAKGTCNMKQFMVDSCRDFLASIDEDEQYSVNFDVEHLCHE 694
Query: 537 KQRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGL 358
KQRSAALSQASVDAFKHVF DIQ L YKY SKDN+L+AMFK+GSKGNLLK+VQHS+CLGL
Sbjct: 695 KQRSAALSQASVDAFKHVFRDIQTLGYKYASKDNALMAMFKSGSKGNLLKVVQHSMCLGL 754
Query: 357 QHSLAPLSFRFPHELSCTAWNILRSGDDTECAKSYIPSAVVENSFLSGLNPLECFVHSVT 178
QHSL PLSFR P +LSC AWN ++ + ECA+SYIPSAVVE FL+GLNPLECFVHSVT
Sbjct: 755 QHSLVPLSFRMPLQLSCDAWNKQKAENAVECARSYIPSAVVEGCFLTGLNPLECFVHSVT 814
Query: 177 SRDSSFSDNADLPGTLTRRLMFFMRDLYTAYDGTVRNAYGNQLVQFSYNI-EGTSAPT 7
SR+SSFSDNADLPGTLTRRLMFFMRD++ AYDG+VR+AYGNQL+QFSYNI EG SA T
Sbjct: 815 SRESSFSDNADLPGTLTRRLMFFMRDVHAAYDGSVRSAYGNQLIQFSYNIDEGRSAET 872
>XP_015576105.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Ricinus
communis]
Length = 1485
Score = 410 bits (1054), Expect = e-129
Identities = 204/298 (68%), Positives = 245/298 (82%), Gaps = 2/298 (0%)
Frame = -2
Query: 894 GELISAEGSAWLRDNEGNIFQYLIKHCQDKVLDFLYAAQELLCEWLSVTGMSVXXXXXXX 715
GELIS+EGS WLRD +GN+FQ LIK CQD+VLDFLY AQE+LCEWLS+ G+SV
Sbjct: 580 GELISSEGSFWLRDTDGNLFQSLIKQCQDQVLDFLYIAQEVLCEWLSMRGLSVSLSDLYL 639
Query: 714 XXXXXSRQILMDEIFHGLREAQDSCNFRQLMVDSHKNFLMRA-EDSESTLSFQAQYLSYE 538
SR+ +MDE+ GL++A+ +CN +Q MVDS ++FL ED + +++F ++L +E
Sbjct: 640 CPDSDSRENMMDEVLFGLQDAKGTCNMKQFMVDSCRDFLASIDEDEQYSVNFDVEHLCHE 699
Query: 537 KQRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGL 358
KQRSAALSQASVDAFKHVF DIQ L YKY SKDN+L+AMFK+GSKGNLLK+VQHS+CLGL
Sbjct: 700 KQRSAALSQASVDAFKHVFRDIQTLGYKYASKDNALMAMFKSGSKGNLLKVVQHSMCLGL 759
Query: 357 QHSLAPLSFRFPHELSCTAWNILRSGDDTECAKSYIPSAVVENSFLSGLNPLECFVHSVT 178
QHSL PLSFR P +LSC AWN ++ + ECA+SYIPSAVVE FL+GLNPLECFVHSVT
Sbjct: 760 QHSLVPLSFRMPLQLSCDAWNKQKAENAVECARSYIPSAVVEGCFLTGLNPLECFVHSVT 819
Query: 177 SRDSSFSDNADLPGTLTRRLMFFMRDLYTAYDGTVRNAYGNQLVQFSYNI-EGTSAPT 7
SR+SSFSDNADLPGTLTRRLMFFMRD++ AYDG+VR+AYGNQL+QFSYNI EG SA T
Sbjct: 820 SRESSFSDNADLPGTLTRRLMFFMRDVHAAYDGSVRSAYGNQLIQFSYNIDEGRSAET 877
>XP_018820498.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Juglans regia] XP_018820499.1 PREDICTED: DNA-directed
RNA polymerase IV subunit 1 isoform X2 [Juglans regia]
XP_018820500.1 PREDICTED: DNA-directed RNA polymerase IV
subunit 1 isoform X2 [Juglans regia] XP_018820501.1
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X2 [Juglans regia]
Length = 1475
Score = 405 bits (1042), Expect = e-127
Identities = 206/304 (67%), Positives = 240/304 (78%), Gaps = 8/304 (2%)
Frame = -2
Query: 894 GELISAEGSAWLRDNEGNIFQYLIKHCQDKVLDFLYAAQELLCEWLSVTGMSVXXXXXXX 715
GEL+S+EGS WLRDN N+FQ LIKHCQ KVLDFLYAAQE+LCEWLS+ G+S+
Sbjct: 578 GELLSSEGSFWLRDNNSNLFQSLIKHCQGKVLDFLYAAQEVLCEWLSMRGLSISLSDLYL 637
Query: 714 XXXXXSRQILMDEIFHGLREAQDSCNFRQLMVDSHKNFLMRAEDSESTLSFQAQYLSYEK 535
SR+ +MDEIF GL+EA+ +CNF+QLMVDS + FL+ + E+ + + L YEK
Sbjct: 638 SSNSSSRKNMMDEIFCGLQEAEQTCNFKQLMVDSCRYFLVEGGE-ENAVVLDVERLCYEK 696
Query: 534 QRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQ 355
Q+S+ALSQASVDAFK VF DIQNL YKY SKDNS ++MFKAGSKGNLLKLVQHS+CLGLQ
Sbjct: 697 QKSSALSQASVDAFKQVFRDIQNLVYKYASKDNSFMSMFKAGSKGNLLKLVQHSMCLGLQ 756
Query: 354 HSLAPLSFRFPHELSCTAWN-------ILRSGDDTECAKSYIPSAVVENSFLSGLNPLEC 196
HSL PLSFR PH+LSC AWN + + D+ E ++YIP AVVENSFL+GLNPLEC
Sbjct: 757 HSLVPLSFRIPHQLSCAAWNNQKVYGSVQDADDNPEHVRTYIPYAVVENSFLTGLNPLEC 816
Query: 195 FVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYTAYDGTVRNAYGNQLVQFSYN-IEGT 19
FVHSVTSRDSSFSDNADLPGTL RRLMF MRD+YTAYDGTVRNAYGNQL+QF YN +
Sbjct: 817 FVHSVTSRDSSFSDNADLPGTLNRRLMFLMRDVYTAYDGTVRNAYGNQLIQFYYNHNKDA 876
Query: 18 SAPT 7
S PT
Sbjct: 877 STPT 880
>XP_018820497.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Juglans regia]
Length = 1544
Score = 405 bits (1042), Expect = e-127
Identities = 206/304 (67%), Positives = 240/304 (78%), Gaps = 8/304 (2%)
Frame = -2
Query: 894 GELISAEGSAWLRDNEGNIFQYLIKHCQDKVLDFLYAAQELLCEWLSVTGMSVXXXXXXX 715
GEL+S+EGS WLRDN N+FQ LIKHCQ KVLDFLYAAQE+LCEWLS+ G+S+
Sbjct: 647 GELLSSEGSFWLRDNNSNLFQSLIKHCQGKVLDFLYAAQEVLCEWLSMRGLSISLSDLYL 706
Query: 714 XXXXXSRQILMDEIFHGLREAQDSCNFRQLMVDSHKNFLMRAEDSESTLSFQAQYLSYEK 535
SR+ +MDEIF GL+EA+ +CNF+QLMVDS + FL+ + E+ + + L YEK
Sbjct: 707 SSNSSSRKNMMDEIFCGLQEAEQTCNFKQLMVDSCRYFLVEGGE-ENAVVLDVERLCYEK 765
Query: 534 QRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQ 355
Q+S+ALSQASVDAFK VF DIQNL YKY SKDNS ++MFKAGSKGNLLKLVQHS+CLGLQ
Sbjct: 766 QKSSALSQASVDAFKQVFRDIQNLVYKYASKDNSFMSMFKAGSKGNLLKLVQHSMCLGLQ 825
Query: 354 HSLAPLSFRFPHELSCTAWN-------ILRSGDDTECAKSYIPSAVVENSFLSGLNPLEC 196
HSL PLSFR PH+LSC AWN + + D+ E ++YIP AVVENSFL+GLNPLEC
Sbjct: 826 HSLVPLSFRIPHQLSCAAWNNQKVYGSVQDADDNPEHVRTYIPYAVVENSFLTGLNPLEC 885
Query: 195 FVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYTAYDGTVRNAYGNQLVQFSYN-IEGT 19
FVHSVTSRDSSFSDNADLPGTL RRLMF MRD+YTAYDGTVRNAYGNQL+QF YN +
Sbjct: 886 FVHSVTSRDSSFSDNADLPGTLNRRLMFLMRDVYTAYDGTVRNAYGNQLIQFYYNHNKDA 945
Query: 18 SAPT 7
S PT
Sbjct: 946 STPT 949
>GAV79426.1 RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1_3
domain-containing protein/RNA_pol_Rpb1_1
domain-containing protein/RNA_pol_Rpb1_4
domain-containing protein/DUF3223 domain-containing
protein, partial [Cephalotus follicularis]
Length = 1513
Score = 404 bits (1038), Expect = e-127
Identities = 207/300 (69%), Positives = 242/300 (80%), Gaps = 4/300 (1%)
Frame = -2
Query: 894 GELI-SAEGSAWLRDNEGNIFQYLIKHCQDKVLDFLYAAQELLCEWLSVTGMSVXXXXXX 718
GELI S+EGSAWL D +GN+FQ +IKHCQ K LDFLY+AQE+LCEWLS+ G SV
Sbjct: 628 GELITSSEGSAWLHDADGNLFQSIIKHCQGKTLDFLYSAQEVLCEWLSMRGFSVSLSDLY 687
Query: 717 XXXXXXSRQILMDEIFHGLREAQDSCNFRQLMVDSHKNFLMRA-EDSESTLSFQAQYLSY 541
SR +MDEI+ GL+EA+ +C++ QLMV+S ++ L + E+ + + F + L Y
Sbjct: 688 LSSDSQSRGNMMDEIYCGLQEAEQTCDYNQLMVESCQDLLAGSGEEDQDAIDFDVERLCY 747
Query: 540 EKQRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLG 361
EKQRSAALSQASVDAFK VF D+Q+L Y+Y SKDNSLLAM+KAGSKGNLLKLVQHS+CLG
Sbjct: 748 EKQRSAALSQASVDAFKQVFRDVQHLVYRYISKDNSLLAMYKAGSKGNLLKLVQHSMCLG 807
Query: 360 LQHSLAPLSFRFPHELSCTAWNI--LRSGDDTECAKSYIPSAVVENSFLSGLNPLECFVH 187
LQHSL PLSF FPH+LSC AWN L S TEC KS+IPSAVVENSFL+GLNPLE FVH
Sbjct: 808 LQHSLVPLSFSFPHQLSCAAWNNHKLPSDHTTECPKSFIPSAVVENSFLTGLNPLETFVH 867
Query: 186 SVTSRDSSFSDNADLPGTLTRRLMFFMRDLYTAYDGTVRNAYGNQLVQFSYNIEGTSAPT 7
SVTSRDSSFSDNADLPGTL+RRLMFFMRDLYTAYDGTVRNAYGNQ+VQFSYN + ++ T
Sbjct: 868 SVTSRDSSFSDNADLPGTLSRRLMFFMRDLYTAYDGTVRNAYGNQIVQFSYNTDKDTSRT 927
>OMP09641.1 RNA polymerase, alpha subunit [Corchorus olitorius]
Length = 1477
Score = 403 bits (1036), Expect = e-127
Identities = 208/302 (68%), Positives = 247/302 (81%), Gaps = 9/302 (2%)
Frame = -2
Query: 894 GELISA-EGSAWLRDNEGNIFQYLIKHCQDKVLDFLYAAQELLCEWLSVTGMSVXXXXXX 718
GEL+S+ EGSAWLRD +GN+FQ LIKH Q KVLDFLYAAQE+LCEWLS+ G+SV
Sbjct: 582 GELMSSSEGSAWLRDADGNLFQSLIKHDQGKVLDFLYAAQEVLCEWLSMRGLSVSLLDLC 641
Query: 717 XXXXXXSRQILMDEIFHGLREAQDSCNFRQLMVDSHKNFLMRAEDSESTLSFQAQYLSYE 538
SR+ +MDEIF GL+E + +CNF+QLMVDS+ +FL+ E+++S ++ A+ +SYE
Sbjct: 642 LSSELTSRKNMMDEIFCGLQEIEQTCNFKQLMVDSNHDFLVGDEETDSFMALDAERMSYE 701
Query: 537 KQRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGL 358
KQRSAALSQASVD+FK VF DIQNL YKY K+NSL+ M+KAGSKGNLLK VQHSLCLGL
Sbjct: 702 KQRSAALSQASVDSFKRVFRDIQNLLYKYADKENSLMTMYKAGSKGNLLKFVQHSLCLGL 761
Query: 357 QHSLAPLSFRFPHELSCTAWNILRSG------DDT-ECAKSYIPSAVVENSFLSGLNPLE 199
QHSL PLSFRFPH+LSC AWN +S DDT E AK+YIP AVVE+SFL+GLNPLE
Sbjct: 762 QHSLVPLSFRFPHQLSCAAWNNQKSNGLSQKIDDTVESAKNYIPYAVVESSFLTGLNPLE 821
Query: 198 CFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYTAYDGTVRNAYGNQLVQFSYNIE-G 22
CF HSVTSR+SSFSDNADLPGTL+RRLMFFMRDL TAYDGTVRNAYG+Q++QF Y+ + G
Sbjct: 822 CFAHSVTSRESSFSDNADLPGTLSRRLMFFMRDLCTAYDGTVRNAYGDQVIQFCYSTDKG 881
Query: 21 TS 16
TS
Sbjct: 882 TS 883
>XP_016717099.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Gossypium hirsutum]
Length = 1340
Score = 399 bits (1024), Expect = e-126
Identities = 207/306 (67%), Positives = 246/306 (80%), Gaps = 10/306 (3%)
Frame = -2
Query: 894 GELI-SAEGSAWLRDNEGNIFQYLIKHCQDKVLDFLYAAQELLCEWLSVTGMSVXXXXXX 718
G+LI S+EGS+WLRD +GN+FQ LIKH Q KVLDFL+AAQE+LCEWLS+ G+SV
Sbjct: 442 GDLICSSEGSSWLRDADGNLFQSLIKHFQGKVLDFLHAAQEVLCEWLSMRGLSVSLLDLY 501
Query: 717 XXXXXXSRQILMDEIFHGLREAQDSCNFRQLMVDSHKNFLM-RAEDSESTLSFQAQYLSY 541
S++ +MDEIF+GL+EA+ +CNF+QLMVDS ++FL E++ + + + Y
Sbjct: 502 LSPDTDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQDFLAGNDEETNRFMVLDVEQMCY 561
Query: 540 EKQRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLG 361
EKQRSAALSQASVD+FK VF DIQNL YKY +KDNSL MFKAGSKGNLLKLVQHS+CLG
Sbjct: 562 EKQRSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLFTMFKAGSKGNLLKLVQHSMCLG 621
Query: 360 LQHSLAPLSFRFPHELSCTAWN------ILRSGDDT-ECAKSYIPSAVVENSFLSGLNPL 202
LQHSL PLSFRFPH+LSC AWN + + DDT E AK YIP AVVE+SF+ GLNPL
Sbjct: 622 LQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKVDDTDESAKKYIPYAVVESSFVKGLNPL 681
Query: 201 ECFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYTAYDGTVRNAYGNQLVQFSYNIE- 25
ECFVHSVT+RD+SFSDNADLPGTL+RRLMFFMRDL TAYDGTVRNAYG+Q+VQF YNI+
Sbjct: 682 ECFVHSVTTRDTSFSDNADLPGTLSRRLMFFMRDLCTAYDGTVRNAYGDQVVQFCYNIDK 741
Query: 24 GTSAPT 7
GT +PT
Sbjct: 742 GTFSPT 747
>XP_017973942.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3
[Theobroma cacao]
Length = 1203
Score = 395 bits (1016), Expect = e-125
Identities = 207/306 (67%), Positives = 244/306 (79%), Gaps = 10/306 (3%)
Frame = -2
Query: 894 GELISA-EGSAWLRDNEGNIFQYLIKHCQDKVLDFLYAAQELLCEWLSVTGMSVXXXXXX 718
GELIS+ EGS WLRD +GN+FQ LIKH Q KVLDFLYAAQE+LCEWLS+ G+SV
Sbjct: 583 GELISSSEGSTWLRDADGNLFQSLIKHYQGKVLDFLYAAQEVLCEWLSMRGLSVSLLDLY 642
Query: 717 XXXXXXSRQILMDEIFHGLREAQDSCNFRQLMVDSHKNFLM-RAEDSESTLSFQAQYLSY 541
S++ +MDEIF GL+E + +CNF+QLMVDS+ +FL+ E+ +S ++ + + Y
Sbjct: 643 LSSDSNSQKNMMDEIFCGLQEIEQTCNFKQLMVDSNHDFLVGHDEEVDSFMALDVEQMCY 702
Query: 540 EKQRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLG 361
EKQRSAALSQASVD+FK VF DIQNL YKY +KDNSLL MFKAGSKGNLLKLVQHSLCLG
Sbjct: 703 EKQRSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLLTMFKAGSKGNLLKLVQHSLCLG 762
Query: 360 LQHSLAPLSFRFPHELSCTAWNILRS-------GDDTECAKSYIPSAVVENSFLSGLNPL 202
LQHSL PLSFRFPH+LSC AWN +S D E AK+YIP AVVE+SF++GLNPL
Sbjct: 763 LQHSLVPLSFRFPHQLSCAAWNNQKSHGLTQKVDDTAESAKNYIPYAVVESSFMTGLNPL 822
Query: 201 ECFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYTAYDGTVRNAYGNQLVQFSYNIE- 25
E FVHSVTSRDSSFSDNADLPGTL+RRLMFFMRDLYTAYDGTVRN+ G+ +VQF Y+I+
Sbjct: 823 ESFVHSVTSRDSSFSDNADLPGTLSRRLMFFMRDLYTAYDGTVRNSCGDLVVQFCYDIDK 882
Query: 24 GTSAPT 7
S+PT
Sbjct: 883 DASSPT 888
>XP_012476049.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
[Gossypium raimondii]
Length = 1300
Score = 397 bits (1019), Expect = e-125
Identities = 206/306 (67%), Positives = 245/306 (80%), Gaps = 10/306 (3%)
Frame = -2
Query: 894 GELI-SAEGSAWLRDNEGNIFQYLIKHCQDKVLDFLYAAQELLCEWLSVTGMSVXXXXXX 718
G+LI S+EGS+WLRD +GN+FQ LIKH Q KVLDFL+AAQE+LCEWLS+ G+SV
Sbjct: 583 GDLICSSEGSSWLRDADGNLFQSLIKHYQGKVLDFLHAAQEVLCEWLSMRGLSVSLLDLY 642
Query: 717 XXXXXXSRQILMDEIFHGLREAQDSCNFRQLMVDSHKNFLM-RAEDSESTLSFQAQYLSY 541
S++ +MDEIF+GL+EA+ +CNF+QLMVDS ++FL E++ + + + Y
Sbjct: 643 LSPDTDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQDFLAGNDEETNRFMVLDVEQMCY 702
Query: 540 EKQRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLG 361
EKQRSAALSQASVD+FK VF DIQNL YKY +KDNSL MFKAGSKGNLLKLVQHS+CLG
Sbjct: 703 EKQRSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLFTMFKAGSKGNLLKLVQHSMCLG 762
Query: 360 LQHSLAPLSFRFPHELSCTAWN------ILRSGDDT-ECAKSYIPSAVVENSFLSGLNPL 202
LQHSL PLSFRFPH+LSC AWN + + DDT E AK YIP AVVE+SF+ GLNPL
Sbjct: 763 LQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKVDDTDESAKKYIPYAVVESSFVKGLNPL 822
Query: 201 ECFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYTAYDGTVRNAYGNQLVQFSYNIE- 25
ECFVHSVT+RD+SFSDNADLPGTL+RRLMFFMRDL AYDGTVRNAYG+Q+VQF YNI+
Sbjct: 823 ECFVHSVTTRDTSFSDNADLPGTLSRRLMFFMRDLCAAYDGTVRNAYGDQVVQFCYNIDK 882
Query: 24 GTSAPT 7
GT +PT
Sbjct: 883 GTFSPT 888
>OMO79420.1 RNA polymerase, alpha subunit [Corchorus capsularis]
Length = 1423
Score = 399 bits (1024), Expect = e-125
Identities = 204/302 (67%), Positives = 244/302 (80%), Gaps = 9/302 (2%)
Frame = -2
Query: 894 GELISA-EGSAWLRDNEGNIFQYLIKHCQDKVLDFLYAAQELLCEWLSVTGMSVXXXXXX 718
GEL+S+ EGSAWLRD +GN+FQ LIKH Q KVLDFLYAAQE+LCEWLS+ G+SV
Sbjct: 530 GELMSSSEGSAWLRDADGNLFQSLIKHDQGKVLDFLYAAQEVLCEWLSMRGLSVSLLDLC 589
Query: 717 XXXXXXSRQILMDEIFHGLREAQDSCNFRQLMVDSHKNFLMRAEDSESTLSFQAQYLSYE 538
SR+ +MDEIF GL+E + +CNF+QLMVDS+ +FL+ E+++S ++ ++ +SYE
Sbjct: 590 LSSESTSRKNMMDEIFCGLQEIEQTCNFKQLMVDSNHDFLVGDEETDSFMALDSERMSYE 649
Query: 537 KQRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGL 358
KQRSAALSQASVD+FK VF DIQNL YKY K+NSL+ M KAGSKGNLLK VQHS+CLGL
Sbjct: 650 KQRSAALSQASVDSFKRVFRDIQNLLYKYADKENSLMTMCKAGSKGNLLKFVQHSMCLGL 709
Query: 357 QHSLAPLSFRFPHELSCTAWNILRS-------GDDTECAKSYIPSAVVENSFLSGLNPLE 199
QHSL PLSFRFPH+LSC AWN +S D E AK+YIP AVVE+SFL+GLNPLE
Sbjct: 710 QHSLVPLSFRFPHQLSCAAWNNQKSHGLSQKIDDTVESAKNYIPYAVVESSFLTGLNPLE 769
Query: 198 CFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYTAYDGTVRNAYGNQLVQFSYNIE-G 22
CF HSVTSR+SSFSDNADLPGTL+RRLMFFMRDL TAYDGTVRNAYG+Q++QF Y+ + G
Sbjct: 770 CFAHSVTSRESSFSDNADLPGTLSRRLMFFMRDLCTAYDGTVRNAYGDQVIQFCYSTDKG 829
Query: 21 TS 16
TS
Sbjct: 830 TS 831
>EOY24612.1 DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
cacao]
Length = 1484
Score = 399 bits (1025), Expect = e-125
Identities = 208/306 (67%), Positives = 245/306 (80%), Gaps = 10/306 (3%)
Frame = -2
Query: 894 GELISA-EGSAWLRDNEGNIFQYLIKHCQDKVLDFLYAAQELLCEWLSVTGMSVXXXXXX 718
GELIS+ EGS WLRD +GN+FQ LIKH Q KVLDFLYAAQE+LCEWLS+ G+SV
Sbjct: 583 GELISSSEGSTWLRDADGNLFQSLIKHYQGKVLDFLYAAQEVLCEWLSMRGLSVSLSDLY 642
Query: 717 XXXXXXSRQILMDEIFHGLREAQDSCNFRQLMVDSHKNFLM-RAEDSESTLSFQAQYLSY 541
S++ +MDEIF GL+E + +CNF+QLMVDS+ +FL+ E+ +S ++ + + Y
Sbjct: 643 LSSDSNSQKNMMDEIFCGLQEIEQTCNFKQLMVDSNHDFLVGHDEEVDSFMALDVEQMCY 702
Query: 540 EKQRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLG 361
EKQRSAALSQASVD+FK VF DIQNL YKY +KDNSLL MFKAGSKGNLLKLVQHSLCLG
Sbjct: 703 EKQRSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLLTMFKAGSKGNLLKLVQHSLCLG 762
Query: 360 LQHSLAPLSFRFPHELSCTAWNILRS-------GDDTECAKSYIPSAVVENSFLSGLNPL 202
LQHSL PLSFRFPH+LSC AWN +S D E AK+YIP AVVE+SF++GLNPL
Sbjct: 763 LQHSLVPLSFRFPHQLSCAAWNNQKSHGLTQKVDDTAESAKNYIPYAVVESSFMTGLNPL 822
Query: 201 ECFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYTAYDGTVRNAYGNQLVQFSYNIE- 25
E FVHSVTSRDSSFSDNADLPGTL+RRLMFFMRDLYTAYDGTVRN+YG+ +VQF Y+I+
Sbjct: 823 ESFVHSVTSRDSSFSDNADLPGTLSRRLMFFMRDLYTAYDGTVRNSYGDLVVQFCYDIDK 882
Query: 24 GTSAPT 7
S+PT
Sbjct: 883 DASSPT 888
>XP_012476048.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Gossypium raimondii]
Length = 1340
Score = 397 bits (1019), Expect = e-125
Identities = 206/306 (67%), Positives = 245/306 (80%), Gaps = 10/306 (3%)
Frame = -2
Query: 894 GELI-SAEGSAWLRDNEGNIFQYLIKHCQDKVLDFLYAAQELLCEWLSVTGMSVXXXXXX 718
G+LI S+EGS+WLRD +GN+FQ LIKH Q KVLDFL+AAQE+LCEWLS+ G+SV
Sbjct: 442 GDLICSSEGSSWLRDADGNLFQSLIKHYQGKVLDFLHAAQEVLCEWLSMRGLSVSLLDLY 501
Query: 717 XXXXXXSRQILMDEIFHGLREAQDSCNFRQLMVDSHKNFLM-RAEDSESTLSFQAQYLSY 541
S++ +MDEIF+GL+EA+ +CNF+QLMVDS ++FL E++ + + + Y
Sbjct: 502 LSPDTDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQDFLAGNDEETNRFMVLDVEQMCY 561
Query: 540 EKQRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLG 361
EKQRSAALSQASVD+FK VF DIQNL YKY +KDNSL MFKAGSKGNLLKLVQHS+CLG
Sbjct: 562 EKQRSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLFTMFKAGSKGNLLKLVQHSMCLG 621
Query: 360 LQHSLAPLSFRFPHELSCTAWN------ILRSGDDT-ECAKSYIPSAVVENSFLSGLNPL 202
LQHSL PLSFRFPH+LSC AWN + + DDT E AK YIP AVVE+SF+ GLNPL
Sbjct: 622 LQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKVDDTDESAKKYIPYAVVESSFVKGLNPL 681
Query: 201 ECFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYTAYDGTVRNAYGNQLVQFSYNIE- 25
ECFVHSVT+RD+SFSDNADLPGTL+RRLMFFMRDL AYDGTVRNAYG+Q+VQF YNI+
Sbjct: 682 ECFVHSVTTRDTSFSDNADLPGTLSRRLMFFMRDLCAAYDGTVRNAYGDQVVQFCYNIDK 741
Query: 24 GTSAPT 7
GT +PT
Sbjct: 742 GTFSPT 747
>XP_016717097.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Gossypium hirsutum] XP_016717098.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Gossypium hirsutum]
Length = 1481
Score = 399 bits (1024), Expect = e-125
Identities = 207/306 (67%), Positives = 246/306 (80%), Gaps = 10/306 (3%)
Frame = -2
Query: 894 GELI-SAEGSAWLRDNEGNIFQYLIKHCQDKVLDFLYAAQELLCEWLSVTGMSVXXXXXX 718
G+LI S+EGS+WLRD +GN+FQ LIKH Q KVLDFL+AAQE+LCEWLS+ G+SV
Sbjct: 583 GDLICSSEGSSWLRDADGNLFQSLIKHFQGKVLDFLHAAQEVLCEWLSMRGLSVSLLDLY 642
Query: 717 XXXXXXSRQILMDEIFHGLREAQDSCNFRQLMVDSHKNFLM-RAEDSESTLSFQAQYLSY 541
S++ +MDEIF+GL+EA+ +CNF+QLMVDS ++FL E++ + + + Y
Sbjct: 643 LSPDTDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQDFLAGNDEETNRFMVLDVEQMCY 702
Query: 540 EKQRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLG 361
EKQRSAALSQASVD+FK VF DIQNL YKY +KDNSL MFKAGSKGNLLKLVQHS+CLG
Sbjct: 703 EKQRSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLFTMFKAGSKGNLLKLVQHSMCLG 762
Query: 360 LQHSLAPLSFRFPHELSCTAWN------ILRSGDDT-ECAKSYIPSAVVENSFLSGLNPL 202
LQHSL PLSFRFPH+LSC AWN + + DDT E AK YIP AVVE+SF+ GLNPL
Sbjct: 763 LQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKVDDTDESAKKYIPYAVVESSFVKGLNPL 822
Query: 201 ECFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYTAYDGTVRNAYGNQLVQFSYNIE- 25
ECFVHSVT+RD+SFSDNADLPGTL+RRLMFFMRDL TAYDGTVRNAYG+Q+VQF YNI+
Sbjct: 823 ECFVHSVTTRDTSFSDNADLPGTLSRRLMFFMRDLCTAYDGTVRNAYGDQVVQFCYNIDK 882
Query: 24 GTSAPT 7
GT +PT
Sbjct: 883 GTFSPT 888
>XP_017973941.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Theobroma cacao]
Length = 1343
Score = 395 bits (1016), Expect = e-124
Identities = 207/306 (67%), Positives = 244/306 (79%), Gaps = 10/306 (3%)
Frame = -2
Query: 894 GELISA-EGSAWLRDNEGNIFQYLIKHCQDKVLDFLYAAQELLCEWLSVTGMSVXXXXXX 718
GELIS+ EGS WLRD +GN+FQ LIKH Q KVLDFLYAAQE+LCEWLS+ G+SV
Sbjct: 442 GELISSSEGSTWLRDADGNLFQSLIKHYQGKVLDFLYAAQEVLCEWLSMRGLSVSLLDLY 501
Query: 717 XXXXXXSRQILMDEIFHGLREAQDSCNFRQLMVDSHKNFLM-RAEDSESTLSFQAQYLSY 541
S++ +MDEIF GL+E + +CNF+QLMVDS+ +FL+ E+ +S ++ + + Y
Sbjct: 502 LSSDSNSQKNMMDEIFCGLQEIEQTCNFKQLMVDSNHDFLVGHDEEVDSFMALDVEQMCY 561
Query: 540 EKQRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLG 361
EKQRSAALSQASVD+FK VF DIQNL YKY +KDNSLL MFKAGSKGNLLKLVQHSLCLG
Sbjct: 562 EKQRSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLLTMFKAGSKGNLLKLVQHSLCLG 621
Query: 360 LQHSLAPLSFRFPHELSCTAWNILRS-------GDDTECAKSYIPSAVVENSFLSGLNPL 202
LQHSL PLSFRFPH+LSC AWN +S D E AK+YIP AVVE+SF++GLNPL
Sbjct: 622 LQHSLVPLSFRFPHQLSCAAWNNQKSHGLTQKVDDTAESAKNYIPYAVVESSFMTGLNPL 681
Query: 201 ECFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYTAYDGTVRNAYGNQLVQFSYNIE- 25
E FVHSVTSRDSSFSDNADLPGTL+RRLMFFMRDLYTAYDGTVRN+ G+ +VQF Y+I+
Sbjct: 682 ESFVHSVTSRDSSFSDNADLPGTLSRRLMFFMRDLYTAYDGTVRNSCGDLVVQFCYDIDK 741
Query: 24 GTSAPT 7
S+PT
Sbjct: 742 DASSPT 747
>KJB25756.1 hypothetical protein B456_004G207300 [Gossypium raimondii]
Length = 1478
Score = 397 bits (1019), Expect = e-124
Identities = 206/306 (67%), Positives = 245/306 (80%), Gaps = 10/306 (3%)
Frame = -2
Query: 894 GELI-SAEGSAWLRDNEGNIFQYLIKHCQDKVLDFLYAAQELLCEWLSVTGMSVXXXXXX 718
G+LI S+EGS+WLRD +GN+FQ LIKH Q KVLDFL+AAQE+LCEWLS+ G+SV
Sbjct: 580 GDLICSSEGSSWLRDADGNLFQSLIKHYQGKVLDFLHAAQEVLCEWLSMRGLSVSLLDLY 639
Query: 717 XXXXXXSRQILMDEIFHGLREAQDSCNFRQLMVDSHKNFLM-RAEDSESTLSFQAQYLSY 541
S++ +MDEIF+GL+EA+ +CNF+QLMVDS ++FL E++ + + + Y
Sbjct: 640 LSPDTDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQDFLAGNDEETNRFMVLDVEQMCY 699
Query: 540 EKQRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLG 361
EKQRSAALSQASVD+FK VF DIQNL YKY +KDNSL MFKAGSKGNLLKLVQHS+CLG
Sbjct: 700 EKQRSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLFTMFKAGSKGNLLKLVQHSMCLG 759
Query: 360 LQHSLAPLSFRFPHELSCTAWN------ILRSGDDT-ECAKSYIPSAVVENSFLSGLNPL 202
LQHSL PLSFRFPH+LSC AWN + + DDT E AK YIP AVVE+SF+ GLNPL
Sbjct: 760 LQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKVDDTDESAKKYIPYAVVESSFVKGLNPL 819
Query: 201 ECFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYTAYDGTVRNAYGNQLVQFSYNIE- 25
ECFVHSVT+RD+SFSDNADLPGTL+RRLMFFMRDL AYDGTVRNAYG+Q+VQF YNI+
Sbjct: 820 ECFVHSVTTRDTSFSDNADLPGTLSRRLMFFMRDLCAAYDGTVRNAYGDQVVQFCYNIDK 879
Query: 24 GTSAPT 7
GT +PT
Sbjct: 880 GTFSPT 885