BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00020958
         (1042 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_008386986.1 PREDICTED: polyadenylation and cleavage factor ho...   254   3e-80
KDO61031.1 hypothetical protein CISIN_1g001465mg [Citrus sinensis]    266   1e-77
XP_006481887.1 PREDICTED: polyadenylation and cleavage factor ho...   266   1e-77
KDO61030.1 hypothetical protein CISIN_1g001465mg [Citrus sinensis]    266   1e-77
XP_006481885.1 PREDICTED: polyadenylation and cleavage factor ho...   266   1e-77
XP_006430296.1 hypothetical protein CICLE_v10010952mg [Citrus cl...   266   1e-77
KDP34758.1 hypothetical protein JCGZ_11830 [Jatropha curcas]          242   4e-75
XP_011018891.1 PREDICTED: uncharacterized protein LOC105121792 i...   259   1e-74
XP_011018890.1 PREDICTED: uncharacterized protein LOC105121792 i...   259   1e-74
KYP70924.1 Pre-mRNA cleavage complex 2 protein Pcf11 [Cajanus ca...   254   9e-74
XP_018839500.1 PREDICTED: polyadenylation and cleavage factor ho...   253   1e-72
XP_018839499.1 PREDICTED: polyadenylation and cleavage factor ho...   253   1e-72
XP_016737759.1 PREDICTED: polyadenylation and cleavage factor ho...   243   2e-72
XP_013468061.1 RNA polymerase II-binding domain protein [Medicag...   251   4e-72
XP_013468060.1 RNA polymerase II-binding domain protein [Medicag...   251   4e-72
XP_007027621.2 PREDICTED: polyadenylation and cleavage factor ho...   251   5e-72
EOY08123.1 ENTH/VHS family protein, putative isoform 2 [Theobrom...   251   5e-72
XP_017977036.1 PREDICTED: polyadenylation and cleavage factor ho...   251   6e-72
XP_007027620.2 PREDICTED: polyadenylation and cleavage factor ho...   251   6e-72
EOY08122.1 ENTH/VHS family protein, putative isoform 1 [Theobrom...   251   6e-72

>XP_008386986.1 PREDICTED: polyadenylation and cleavage factor homolog 4 [Malus
           domestica]
          Length = 261

 Score =  254 bits (649), Expect = 3e-80
 Identities = 128/162 (79%), Positives = 136/162 (83%)
 Frame = +3

Query: 3   TFNSKPIITNLTIIAGENVHAAKAIVATVCANILEVPSEQKLPSLYLLDSIVKNIQSDYI 182
           TFNSKPIITNLTIIAGENVHAAK++ ATVC NI+EVPSEQKLPSLYLLDSIVKNI  DYI
Sbjct: 88  TFNSKPIITNLTIIAGENVHAAKSVAATVCGNIIEVPSEQKLPSLYLLDSIVKNIGRDYI 147

Query: 183 KYFAARLPEVFCKAYRRVDASVHSSMRHLFGTWKGVFPPVTLQMIEKELSFTPVVNGSIS 362
           KYFAARLPEVFCKAYR+V+  +H SMRHLFGTWKGVFP  TLQMIEKEL F+   NGS S
Sbjct: 148 KYFAARLPEVFCKAYRQVEPPIHQSMRHLFGTWKGVFPAQTLQMIEKELGFSSTANGSSS 207

Query: 363 VATASRSDSQLQHSQLSIHVNPKYLERQHLQQTSRVSGAEKS 488
           VA  SR DSQ Q    SIHVNPKYLERQ LQQ +RVSG  KS
Sbjct: 208 VAATSRPDSQSQRPAHSIHVNPKYLERQRLQQPARVSGVLKS 249


>KDO61031.1 hypothetical protein CISIN_1g001465mg [Citrus sinensis]
          Length = 1070

 Score =  266 bits (681), Expect = 1e-77
 Identities = 135/158 (85%), Positives = 141/158 (89%)
 Frame = +3

Query: 3   TFNSKPIITNLTIIAGENVHAAKAIVATVCANILEVPSEQKLPSLYLLDSIVKNIQSDYI 182
           TFNSKPIITNLTIIAGENVHAAKAI AT+CANILEVPS+QKLPSLYLLDSIVKNI SDYI
Sbjct: 83  TFNSKPIITNLTIIAGENVHAAKAIAATICANILEVPSDQKLPSLYLLDSIVKNIASDYI 142

Query: 183 KYFAARLPEVFCKAYRRVDASVHSSMRHLFGTWKGVFPPVTLQMIEKELSFTPVVNGSIS 362
           KYFAARLPEVFCKAYR+VDA+V SSMRHLFGTWKGVFPP+TLQ+IEKEL FT VVNGS S
Sbjct: 143 KYFAARLPEVFCKAYRQVDAAVRSSMRHLFGTWKGVFPPMTLQIIEKELGFTSVVNGSSS 202

Query: 363 VATASRSDSQLQHSQLSIHVNPKYLERQHLQQTSRVSG 476
            AT SR DSQ Q    SIHVNPKYLERQ LQQTSR  G
Sbjct: 203 GATTSRHDSQSQRPPHSIHVNPKYLERQRLQQTSRAKG 240



 Score =  218 bits (554), Expect = 6e-60
 Identities = 117/172 (68%), Positives = 133/172 (77%), Gaps = 5/172 (2%)
 Frame = +3

Query: 540  QNLQSLAEKDYPHAPPLSRPDLKTSSFPGLVNAGPHGHSPKDLLSILHSSSQLGNLQKIH 719
            QN+Q+  ++DYPHA PLSRPDLKTSSFPGLV++GP GHS KD  SILH +SQLGNLQK+ 
Sbjct: 564  QNMQNCTDRDYPHAQPLSRPDLKTSSFPGLVSSGPRGHSTKDSPSILHPNSQLGNLQKVQ 623

Query: 720  PQDLKGSSPAITSFQLNRHYPPQLLQSDCKQPETSGHSQKPLLPQVSNFGTPSSREAVSD 899
            PQDLKGSSPA+TSFQLN           C+       SQKPLLPQVSNFG PS++EAVSD
Sbjct: 624  PQDLKGSSPAVTSFQLN-----------CQ-------SQKPLLPQVSNFGAPSTKEAVSD 665

Query: 900  RSNPLDTEASRQSGTSSLLAAVLK-----SSITDGLANQALQEVGQMPLQSD 1040
             SNPLD E   QSGTSSLLA+VLK     SSITDGLAN+AL+EVGQ+PLQ D
Sbjct: 666  HSNPLDAEGLGQSGTSSLLASVLKSGILNSSITDGLANRALKEVGQIPLQLD 717


>XP_006481887.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X2 [Citrus sinensis]
          Length = 1070

 Score =  266 bits (681), Expect = 1e-77
 Identities = 135/158 (85%), Positives = 141/158 (89%)
 Frame = +3

Query: 3   TFNSKPIITNLTIIAGENVHAAKAIVATVCANILEVPSEQKLPSLYLLDSIVKNIQSDYI 182
           TFNSKPIITNLTIIAGENVHAAKAI AT+CANILEVPS+QKLPSLYLLDSIVKNI SDYI
Sbjct: 83  TFNSKPIITNLTIIAGENVHAAKAIAATICANILEVPSDQKLPSLYLLDSIVKNIASDYI 142

Query: 183 KYFAARLPEVFCKAYRRVDASVHSSMRHLFGTWKGVFPPVTLQMIEKELSFTPVVNGSIS 362
           KYFAARLPEVFCKAYR+VDA+V SSMRHLFGTWKGVFPP+TLQ+IEKEL FT VVNGS S
Sbjct: 143 KYFAARLPEVFCKAYRQVDAAVRSSMRHLFGTWKGVFPPMTLQIIEKELGFTSVVNGSSS 202

Query: 363 VATASRSDSQLQHSQLSIHVNPKYLERQHLQQTSRVSG 476
            AT SR DSQ Q    SIHVNPKYLERQ LQQTSR  G
Sbjct: 203 GATTSRHDSQSQRPPHSIHVNPKYLERQRLQQTSRAKG 240



 Score =  219 bits (558), Expect = 2e-60
 Identities = 118/172 (68%), Positives = 133/172 (77%), Gaps = 5/172 (2%)
 Frame = +3

Query: 540  QNLQSLAEKDYPHAPPLSRPDLKTSSFPGLVNAGPHGHSPKDLLSILHSSSQLGNLQKIH 719
            QN+Q+  ++DYPHA PLSRPDLKTSSFPGLV++GP GHS KDL SILH +SQLGNL K+ 
Sbjct: 564  QNMQNCTDRDYPHAQPLSRPDLKTSSFPGLVSSGPRGHSTKDLPSILHPNSQLGNLHKVQ 623

Query: 720  PQDLKGSSPAITSFQLNRHYPPQLLQSDCKQPETSGHSQKPLLPQVSNFGTPSSREAVSD 899
            PQDLKGSSPA+TSFQLN           C+       SQKPLLPQVSNFG PSS+EAVSD
Sbjct: 624  PQDLKGSSPAVTSFQLN-----------CQ-------SQKPLLPQVSNFGAPSSKEAVSD 665

Query: 900  RSNPLDTEASRQSGTSSLLAAVLK-----SSITDGLANQALQEVGQMPLQSD 1040
             SNPLD E   QSGTSSLLA+VLK     SSITDGLAN+AL+EVGQ+PLQ D
Sbjct: 666  HSNPLDAEGLGQSGTSSLLASVLKSGILNSSITDGLANRALREVGQIPLQLD 717


>KDO61030.1 hypothetical protein CISIN_1g001465mg [Citrus sinensis]
          Length = 1073

 Score =  266 bits (681), Expect = 1e-77
 Identities = 135/158 (85%), Positives = 141/158 (89%)
 Frame = +3

Query: 3   TFNSKPIITNLTIIAGENVHAAKAIVATVCANILEVPSEQKLPSLYLLDSIVKNIQSDYI 182
           TFNSKPIITNLTIIAGENVHAAKAI AT+CANILEVPS+QKLPSLYLLDSIVKNI SDYI
Sbjct: 83  TFNSKPIITNLTIIAGENVHAAKAIAATICANILEVPSDQKLPSLYLLDSIVKNIASDYI 142

Query: 183 KYFAARLPEVFCKAYRRVDASVHSSMRHLFGTWKGVFPPVTLQMIEKELSFTPVVNGSIS 362
           KYFAARLPEVFCKAYR+VDA+V SSMRHLFGTWKGVFPP+TLQ+IEKEL FT VVNGS S
Sbjct: 143 KYFAARLPEVFCKAYRQVDAAVRSSMRHLFGTWKGVFPPMTLQIIEKELGFTSVVNGSSS 202

Query: 363 VATASRSDSQLQHSQLSIHVNPKYLERQHLQQTSRVSG 476
            AT SR DSQ Q    SIHVNPKYLERQ LQQTSR  G
Sbjct: 203 GATTSRHDSQSQRPPHSIHVNPKYLERQRLQQTSRAKG 240



 Score =  218 bits (554), Expect = 6e-60
 Identities = 117/172 (68%), Positives = 133/172 (77%), Gaps = 5/172 (2%)
 Frame = +3

Query: 540  QNLQSLAEKDYPHAPPLSRPDLKTSSFPGLVNAGPHGHSPKDLLSILHSSSQLGNLQKIH 719
            QN+Q+  ++DYPHA PLSRPDLKTSSFPGLV++GP GHS KD  SILH +SQLGNLQK+ 
Sbjct: 567  QNMQNCTDRDYPHAQPLSRPDLKTSSFPGLVSSGPRGHSTKDSPSILHPNSQLGNLQKVQ 626

Query: 720  PQDLKGSSPAITSFQLNRHYPPQLLQSDCKQPETSGHSQKPLLPQVSNFGTPSSREAVSD 899
            PQDLKGSSPA+TSFQLN           C+       SQKPLLPQVSNFG PS++EAVSD
Sbjct: 627  PQDLKGSSPAVTSFQLN-----------CQ-------SQKPLLPQVSNFGAPSTKEAVSD 668

Query: 900  RSNPLDTEASRQSGTSSLLAAVLK-----SSITDGLANQALQEVGQMPLQSD 1040
             SNPLD E   QSGTSSLLA+VLK     SSITDGLAN+AL+EVGQ+PLQ D
Sbjct: 669  HSNPLDAEGLGQSGTSSLLASVLKSGILNSSITDGLANRALKEVGQIPLQLD 720


>XP_006481885.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X1 [Citrus sinensis] XP_006481886.1 PREDICTED:
           polyadenylation and cleavage factor homolog 4-like
           isoform X1 [Citrus sinensis]
          Length = 1073

 Score =  266 bits (681), Expect = 1e-77
 Identities = 135/158 (85%), Positives = 141/158 (89%)
 Frame = +3

Query: 3   TFNSKPIITNLTIIAGENVHAAKAIVATVCANILEVPSEQKLPSLYLLDSIVKNIQSDYI 182
           TFNSKPIITNLTIIAGENVHAAKAI AT+CANILEVPS+QKLPSLYLLDSIVKNI SDYI
Sbjct: 83  TFNSKPIITNLTIIAGENVHAAKAIAATICANILEVPSDQKLPSLYLLDSIVKNIASDYI 142

Query: 183 KYFAARLPEVFCKAYRRVDASVHSSMRHLFGTWKGVFPPVTLQMIEKELSFTPVVNGSIS 362
           KYFAARLPEVFCKAYR+VDA+V SSMRHLFGTWKGVFPP+TLQ+IEKEL FT VVNGS S
Sbjct: 143 KYFAARLPEVFCKAYRQVDAAVRSSMRHLFGTWKGVFPPMTLQIIEKELGFTSVVNGSSS 202

Query: 363 VATASRSDSQLQHSQLSIHVNPKYLERQHLQQTSRVSG 476
            AT SR DSQ Q    SIHVNPKYLERQ LQQTSR  G
Sbjct: 203 GATTSRHDSQSQRPPHSIHVNPKYLERQRLQQTSRAKG 240



 Score =  219 bits (558), Expect = 2e-60
 Identities = 118/172 (68%), Positives = 133/172 (77%), Gaps = 5/172 (2%)
 Frame = +3

Query: 540  QNLQSLAEKDYPHAPPLSRPDLKTSSFPGLVNAGPHGHSPKDLLSILHSSSQLGNLQKIH 719
            QN+Q+  ++DYPHA PLSRPDLKTSSFPGLV++GP GHS KDL SILH +SQLGNL K+ 
Sbjct: 567  QNMQNCTDRDYPHAQPLSRPDLKTSSFPGLVSSGPRGHSTKDLPSILHPNSQLGNLHKVQ 626

Query: 720  PQDLKGSSPAITSFQLNRHYPPQLLQSDCKQPETSGHSQKPLLPQVSNFGTPSSREAVSD 899
            PQDLKGSSPA+TSFQLN           C+       SQKPLLPQVSNFG PSS+EAVSD
Sbjct: 627  PQDLKGSSPAVTSFQLN-----------CQ-------SQKPLLPQVSNFGAPSSKEAVSD 668

Query: 900  RSNPLDTEASRQSGTSSLLAAVLK-----SSITDGLANQALQEVGQMPLQSD 1040
             SNPLD E   QSGTSSLLA+VLK     SSITDGLAN+AL+EVGQ+PLQ D
Sbjct: 669  HSNPLDAEGLGQSGTSSLLASVLKSGILNSSITDGLANRALREVGQIPLQLD 720


>XP_006430296.1 hypothetical protein CICLE_v10010952mg [Citrus clementina]
           ESR43536.1 hypothetical protein CICLE_v10010952mg
           [Citrus clementina]
          Length = 1073

 Score =  266 bits (681), Expect = 1e-77
 Identities = 135/158 (85%), Positives = 141/158 (89%)
 Frame = +3

Query: 3   TFNSKPIITNLTIIAGENVHAAKAIVATVCANILEVPSEQKLPSLYLLDSIVKNIQSDYI 182
           TFNSKPIITNLTIIAGENVHAAKAI AT+CANILEVPS+QKLPSLYLLDSIVKNI SDYI
Sbjct: 83  TFNSKPIITNLTIIAGENVHAAKAIAATICANILEVPSDQKLPSLYLLDSIVKNIASDYI 142

Query: 183 KYFAARLPEVFCKAYRRVDASVHSSMRHLFGTWKGVFPPVTLQMIEKELSFTPVVNGSIS 362
           KYFAARLPEVFCKAYR+VDA+V SSMRHLFGTWKGVFPP+TLQ+IEKEL FT VVNGS S
Sbjct: 143 KYFAARLPEVFCKAYRQVDAAVRSSMRHLFGTWKGVFPPMTLQIIEKELGFTSVVNGSSS 202

Query: 363 VATASRSDSQLQHSQLSIHVNPKYLERQHLQQTSRVSG 476
            AT SR DSQ Q    SIHVNPKYLERQ LQQTSR  G
Sbjct: 203 GATTSRHDSQSQRPPHSIHVNPKYLERQRLQQTSRAKG 240



 Score =  216 bits (550), Expect = 2e-59
 Identities = 132/257 (51%), Positives = 154/257 (59%), Gaps = 5/257 (1%)
 Frame = +3

Query: 285  GVFPPVTLQMIEKELSFTPVVNGSISVATASRSDSQLQHSQLSIHVNPKYLERQHLQQTS 464
            G FP  +   + +     PVV+  I  +      S    S  S       L  Q  Q   
Sbjct: 488  GGFPASSSSSLARTGGHPPVVSSHIGTSGFGTLASSASGSTGS-------LATQRFQSAR 540

Query: 465  RVSGAEKSSMXXXXXXXXXXXXXXCQNLQSLAEKDYPHAPPLSRPDLKTSSFPGLVNAGP 644
              S +  S M               QN+Q+  ++DYPHA PLSRPDLKTSSFPGLV++GP
Sbjct: 541  AGSPSGHSPMHHHSPSPSVPAHHPRQNMQNCTDRDYPHAQPLSRPDLKTSSFPGLVSSGP 600

Query: 645  HGHSPKDLLSILHSSSQLGNLQKIHPQDLKGSSPAITSFQLNRHYPPQLLQSDCKQPETS 824
             GHS KD  SILH +SQLGNL K+ PQDLKGSSPA+TSFQLN           C+     
Sbjct: 601  RGHSTKDSPSILHPNSQLGNLPKVQPQDLKGSSPAVTSFQLN-----------CQ----- 644

Query: 825  GHSQKPLLPQVSNFGTPSSREAVSDRSNPLDTEASRQSGTSSLLAAVLK-----SSITDG 989
              SQKPLLPQVSNFG PS++EAVSD SNPLD E   QSGTSSLLA+VLK     SSITDG
Sbjct: 645  --SQKPLLPQVSNFGAPSTKEAVSDHSNPLDAEGLGQSGTSSLLASVLKSGILNSSITDG 702

Query: 990  LANQALQEVGQMPLQSD 1040
            LAN+AL+EVGQ+PLQ D
Sbjct: 703  LANRALKEVGQIPLQLD 719


>KDP34758.1 hypothetical protein JCGZ_11830 [Jatropha curcas]
          Length = 285

 Score =  242 bits (617), Expect = 4e-75
 Identities = 125/158 (79%), Positives = 133/158 (84%)
 Frame = +3

Query: 3   TFNSKPIITNLTIIAGENVHAAKAIVATVCANILEVPSEQKLPSLYLLDSIVKNIQSDYI 182
           TFNSKPII NLTIIAGEN+HAAKAI ATVCANILEVPSEQKLPSLYLLDSIVKNI  DYI
Sbjct: 64  TFNSKPIIANLTIIAGENLHAAKAIAATVCANILEVPSEQKLPSLYLLDSIVKNIGRDYI 123

Query: 183 KYFAARLPEVFCKAYRRVDASVHSSMRHLFGTWKGVFPPVTLQMIEKELSFTPVVNGSIS 362
           KYFAARLPEVFCKAYR VD SVH+SM+HLFGTWKGVFPP +LQMIEKEL F   VNGS S
Sbjct: 124 KYFAARLPEVFCKAYRHVDPSVHASMQHLFGTWKGVFPPQSLQMIEKELGFGSGVNGSSS 183

Query: 363 VATASRSDSQLQHSQLSIHVNPKYLERQHLQQTSRVSG 476
            A  SR+D   +  Q S+HVNPKYLE Q LQQ+SR  G
Sbjct: 184 GAATSRTDP--RRPQHSVHVNPKYLEIQRLQQSSRAKG 219


>XP_011018891.1 PREDICTED: uncharacterized protein LOC105121792 isoform X2 [Populus
           euphratica]
          Length = 1084

 Score =  259 bits (661), Expect = 1e-74
 Identities = 129/158 (81%), Positives = 138/158 (87%)
 Frame = +3

Query: 3   TFNSKPIITNLTIIAGENVHAAKAIVATVCANILEVPSEQKLPSLYLLDSIVKNIQSDYI 182
           TFNSKPIITNLTIIAGEN+HAAKA+ AT+CANILEVPSEQKLPSLYLLDSIVKNI  DYI
Sbjct: 92  TFNSKPIITNLTIIAGENLHAAKAVAATICANILEVPSEQKLPSLYLLDSIVKNIGRDYI 151

Query: 183 KYFAARLPEVFCKAYRRVDASVHSSMRHLFGTWKGVFPPVTLQMIEKELSFTPVVNGSIS 362
           KYFAARLPEVFCKAYR+VD+SVHSSMRHLFGTWKGVFPP  LQMIEKEL   P VNGS +
Sbjct: 152 KYFAARLPEVFCKAYRQVDSSVHSSMRHLFGTWKGVFPPQPLQMIEKELGLAPAVNGSSA 211

Query: 363 VATASRSDSQLQHSQLSIHVNPKYLERQHLQQTSRVSG 476
            A ASRS+SQ Q    SIHVNPKYLERQ +QQ+SR  G
Sbjct: 212 GAAASRSESQSQRPPNSIHVNPKYLERQRIQQSSRAKG 249



 Score = 98.2 bits (243), Expect = 9e-19
 Identities = 68/171 (39%), Positives = 99/171 (57%), Gaps = 7/171 (4%)
 Frame = +3

Query: 546  LQSLAEKDYPHAPPLSRPDLKTSSFPGLVNAGPHGHSPKDLLSILHSSSQLGNLQKIHPQ 725
            LQ+  E+DY  +  +++PD + + F G               ++L S+ QLGNL K+  +
Sbjct: 586  LQNSGEQDYHQSQSMTQPDFR-AQFSG---------------NLLPSNVQLGNLPKLQSE 629

Query: 726  DLKGSSPAITSFQLN-RHYPPQLLQSDCKQPETSGHSQKPLLPQVSNFGTPS-SREAVSD 899
            +L+  +P++ SFQL+ +H+  Q  QSD K+ E  G  Q+P LP VSNFGT S S  + +D
Sbjct: 630  ELQ--APSLPSFQLSHQHHLSQPRQSDSKESEAFGQIQRPHLPPVSNFGTSSTSVSSAAD 687

Query: 900  RSNPLDTEASRQSGTSSLLAAVLK----SSITDGLA-NQALQEVGQMPLQS 1037
              NP     S QS TSSLLAAV+K    S I  G+  +Q  Q++G+MP QS
Sbjct: 688  HLNPFTAGTSGQSSTSSLLAAVMKTGILSKINSGIVPDQNFQDIGKMPSQS 738


>XP_011018890.1 PREDICTED: uncharacterized protein LOC105121792 isoform X1 [Populus
           euphratica]
          Length = 1092

 Score =  259 bits (661), Expect = 1e-74
 Identities = 129/158 (81%), Positives = 138/158 (87%)
 Frame = +3

Query: 3   TFNSKPIITNLTIIAGENVHAAKAIVATVCANILEVPSEQKLPSLYLLDSIVKNIQSDYI 182
           TFNSKPIITNLTIIAGEN+HAAKA+ AT+CANILEVPSEQKLPSLYLLDSIVKNI  DYI
Sbjct: 92  TFNSKPIITNLTIIAGENLHAAKAVAATICANILEVPSEQKLPSLYLLDSIVKNIGRDYI 151

Query: 183 KYFAARLPEVFCKAYRRVDASVHSSMRHLFGTWKGVFPPVTLQMIEKELSFTPVVNGSIS 362
           KYFAARLPEVFCKAYR+VD+SVHSSMRHLFGTWKGVFPP  LQMIEKEL   P VNGS +
Sbjct: 152 KYFAARLPEVFCKAYRQVDSSVHSSMRHLFGTWKGVFPPQPLQMIEKELGLAPAVNGSSA 211

Query: 363 VATASRSDSQLQHSQLSIHVNPKYLERQHLQQTSRVSG 476
            A ASRS+SQ Q    SIHVNPKYLERQ +QQ+SR  G
Sbjct: 212 GAAASRSESQSQRPPNSIHVNPKYLERQRIQQSSRAKG 249



 Score = 98.2 bits (243), Expect = 9e-19
 Identities = 68/171 (39%), Positives = 99/171 (57%), Gaps = 7/171 (4%)
 Frame = +3

Query: 546  LQSLAEKDYPHAPPLSRPDLKTSSFPGLVNAGPHGHSPKDLLSILHSSSQLGNLQKIHPQ 725
            LQ+  E+DY  +  +++PD + + F G               ++L S+ QLGNL K+  +
Sbjct: 586  LQNSGEQDYHQSQSMTQPDFR-AQFSG---------------NLLPSNVQLGNLPKLQSE 629

Query: 726  DLKGSSPAITSFQLN-RHYPPQLLQSDCKQPETSGHSQKPLLPQVSNFGTPS-SREAVSD 899
            +L+  +P++ SFQL+ +H+  Q  QSD K+ E  G  Q+P LP VSNFGT S S  + +D
Sbjct: 630  ELQ--APSLPSFQLSHQHHLSQPRQSDSKESEAFGQIQRPHLPPVSNFGTSSTSVSSAAD 687

Query: 900  RSNPLDTEASRQSGTSSLLAAVLK----SSITDGLA-NQALQEVGQMPLQS 1037
              NP     S QS TSSLLAAV+K    S I  G+  +Q  Q++G+MP QS
Sbjct: 688  HLNPFTAGTSGQSSTSSLLAAVMKTGILSKINSGIVPDQNFQDIGKMPSQS 738


>KYP70924.1 Pre-mRNA cleavage complex 2 protein Pcf11 [Cajanus cajan]
          Length = 918

 Score =  254 bits (649), Expect = 9e-74
 Identities = 129/158 (81%), Positives = 135/158 (85%)
 Frame = +3

Query: 3   TFNSKPIITNLTIIAGENVHAAKAIVATVCANILEVPSEQKLPSLYLLDSIVKNIQSDYI 182
           TFNSKPIITNLTIIAGEN  AAK+I ATVCANILEVPS+QKLPSLYLLDSIVKNI  DYI
Sbjct: 88  TFNSKPIITNLTIIAGENQSAAKSIAATVCANILEVPSDQKLPSLYLLDSIVKNIGQDYI 147

Query: 183 KYFAARLPEVFCKAYRRVDASVHSSMRHLFGTWKGVFPPVTLQMIEKELSFTPVVNGSIS 362
           KYFAARLPEVFCKAYR+VD SVHSSM+HLFGTWKGVFPP  LQMIEKEL F P VNGS S
Sbjct: 148 KYFAARLPEVFCKAYRQVDPSVHSSMKHLFGTWKGVFPPQCLQMIEKELGFAPAVNGSAS 207

Query: 363 VATASRSDSQLQHSQLSIHVNPKYLERQHLQQTSRVSG 476
           V+   RSD Q Q    SIHVNPKYLERQ LQQ+SRV G
Sbjct: 208 VSATVRSDLQSQRPPHSIHVNPKYLERQRLQQSSRVGG 245


>XP_018839500.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
           [Juglans regia]
          Length = 1053

 Score =  253 bits (645), Expect = 1e-72
 Identities = 128/156 (82%), Positives = 137/156 (87%), Gaps = 1/156 (0%)
 Frame = +3

Query: 3   TFNSKPIITNLTIIAGENVHAAKAIVATVCANILEVPSEQKLPSLYLLDSIVKNIQSDYI 182
           TFNSKPIITNLTIIAGEN+HAAKAI ATVCANILEVP+EQKLPSLYLLDSIVKNI  DYI
Sbjct: 90  TFNSKPIITNLTIIAGENLHAAKAIAATVCANILEVPTEQKLPSLYLLDSIVKNIGRDYI 149

Query: 183 KYFAARLPEVFCKAYRRVDASVHSSMRHLFGTWKGVFPPVTLQMIEKELSFTPVVNGSIS 362
           KYFAARLPEVFCKAYR+VD +VHSSMRHLFGTWKGVFPP  LQMIEKEL FTP++N S S
Sbjct: 150 KYFAARLPEVFCKAYRQVDPAVHSSMRHLFGTWKGVFPPPALQMIEKELGFTPIINVSSS 209

Query: 363 VA-TASRSDSQLQHSQLSIHVNPKYLERQHLQQTSR 467
           +A T S+ DSQ Q    SIHVNPKYLERQ LQQ+ R
Sbjct: 210 LATTTSKPDSQSQRQPHSIHVNPKYLERQRLQQSGR 245



 Score =  105 bits (262), Expect = 3e-21
 Identities = 84/245 (34%), Positives = 124/245 (50%), Gaps = 13/245 (5%)
 Frame = +3

Query: 342  VVNGSISVATA-SRSDSQLQHSQLSIHVNPKY-----LERQHLQQTSRVSGAEKSSMXXX 503
            +   S SVA++ SR     Q   L + +N        + +Q  Q     S + +S M   
Sbjct: 464  LTQSSTSVASSISRIGGHQQMGGLGVLINAVSGSTGTVGQQRFQSQGAASPSAQSPMHQH 523

Query: 504  XXXXXXXXXXXCQNLQSLAEKDYPHAPPLSRPDLKTSSFPGLVNAGPHGHSPKDLLSILH 683
                          LQ+LA++++P    L +P+LK + F G +N GP     +D     H
Sbjct: 524  PQSPSLVVRPSHHQLQNLAKREHPQTLSLPQPNLKGAQFLGRLNMGPSNQYAQDSSPFQH 583

Query: 684  SSSQLGNLQKIHPQDLKGSSPAITSFQLNRHYPPQLLQSDCKQPETSGHSQKPLLPQVSN 863
             + Q G LQK+ P+ L+ S+ ++ SFQ  RH+  Q  QSD    + S   +KP+LP VS+
Sbjct: 584  PNVQPGPLQKLQPRGLQASA-SVPSFQ-PRHHDEQ--QSDSMLSQPSSEIRKPILPSVSD 639

Query: 864  FGTPSS-REAVSDRSNPLDTEASRQSGTSSLLAAVLKS------SITDGLANQALQEVGQ 1022
             G+PS+   + SD S+ L  E+S Q  TSSLLAAV+KS      SIT  L N  + ++GQ
Sbjct: 640  TGSPSTVGNSASDHSD-LAAESSGQPSTSSLLAAVMKSGIFSNNSITGSLPNLTVPDIGQ 698

Query: 1023 MPLQS 1037
            MP  S
Sbjct: 699  MPSHS 703


>XP_018839499.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
           [Juglans regia]
          Length = 1055

 Score =  253 bits (645), Expect = 1e-72
 Identities = 128/156 (82%), Positives = 137/156 (87%), Gaps = 1/156 (0%)
 Frame = +3

Query: 3   TFNSKPIITNLTIIAGENVHAAKAIVATVCANILEVPSEQKLPSLYLLDSIVKNIQSDYI 182
           TFNSKPIITNLTIIAGEN+HAAKAI ATVCANILEVP+EQKLPSLYLLDSIVKNI  DYI
Sbjct: 90  TFNSKPIITNLTIIAGENLHAAKAIAATVCANILEVPTEQKLPSLYLLDSIVKNIGRDYI 149

Query: 183 KYFAARLPEVFCKAYRRVDASVHSSMRHLFGTWKGVFPPVTLQMIEKELSFTPVVNGSIS 362
           KYFAARLPEVFCKAYR+VD +VHSSMRHLFGTWKGVFPP  LQMIEKEL FTP++N S S
Sbjct: 150 KYFAARLPEVFCKAYRQVDPAVHSSMRHLFGTWKGVFPPPALQMIEKELGFTPIINVSSS 209

Query: 363 VA-TASRSDSQLQHSQLSIHVNPKYLERQHLQQTSR 467
           +A T S+ DSQ Q    SIHVNPKYLERQ LQQ+ R
Sbjct: 210 LATTTSKPDSQSQRQPHSIHVNPKYLERQRLQQSGR 245



 Score =  105 bits (262), Expect = 3e-21
 Identities = 84/245 (34%), Positives = 124/245 (50%), Gaps = 13/245 (5%)
 Frame = +3

Query: 342  VVNGSISVATA-SRSDSQLQHSQLSIHVNPKY-----LERQHLQQTSRVSGAEKSSMXXX 503
            +   S SVA++ SR     Q   L + +N        + +Q  Q     S + +S M   
Sbjct: 466  LTQSSTSVASSISRIGGHQQMGGLGVLINAVSGSTGTVGQQRFQSQGAASPSAQSPMHQH 525

Query: 504  XXXXXXXXXXXCQNLQSLAEKDYPHAPPLSRPDLKTSSFPGLVNAGPHGHSPKDLLSILH 683
                          LQ+LA++++P    L +P+LK + F G +N GP     +D     H
Sbjct: 526  PQSPSLVVRPSHHQLQNLAKREHPQTLSLPQPNLKGAQFLGRLNMGPSNQYAQDSSPFQH 585

Query: 684  SSSQLGNLQKIHPQDLKGSSPAITSFQLNRHYPPQLLQSDCKQPETSGHSQKPLLPQVSN 863
             + Q G LQK+ P+ L+ S+ ++ SFQ  RH+  Q  QSD    + S   +KP+LP VS+
Sbjct: 586  PNVQPGPLQKLQPRGLQASA-SVPSFQ-PRHHDEQ--QSDSMLSQPSSEIRKPILPSVSD 641

Query: 864  FGTPSS-REAVSDRSNPLDTEASRQSGTSSLLAAVLKS------SITDGLANQALQEVGQ 1022
             G+PS+   + SD S+ L  E+S Q  TSSLLAAV+KS      SIT  L N  + ++GQ
Sbjct: 642  TGSPSTVGNSASDHSD-LAAESSGQPSTSSLLAAVMKSGIFSNNSITGSLPNLTVPDIGQ 700

Query: 1023 MPLQS 1037
            MP  S
Sbjct: 701  MPSHS 705


>XP_016737759.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like,
           partial [Gossypium hirsutum]
          Length = 565

 Score =  243 bits (621), Expect = 2e-72
 Identities = 124/160 (77%), Positives = 138/160 (86%)
 Frame = +3

Query: 3   TFNSKPIITNLTIIAGENVHAAKAIVATVCANILEVPSEQKLPSLYLLDSIVKNIQSDYI 182
           TFNSKPIITNLTIIAGENVHAAKAI ATVC+NILEVPS+QKLPSLYLLDSIVKNI  DYI
Sbjct: 96  TFNSKPIITNLTIIAGENVHAAKAIAATVCSNILEVPSDQKLPSLYLLDSIVKNIGRDYI 155

Query: 183 KYFAARLPEVFCKAYRRVDASVHSSMRHLFGTWKGVFPPVTLQMIEKELSFTPVVNGSIS 362
           K FAARLPEVFCKAY++V+  +H SMRHLFGTWKGVFP  TLQ+IEKEL FTP+VNGS S
Sbjct: 156 KCFAARLPEVFCKAYKQVNPPLHQSMRHLFGTWKGVFPVQTLQVIEKELGFTPLVNGSSS 215

Query: 363 VATASRSDSQLQHSQLSIHVNPKYLERQHLQQTSRVSGAE 482
             T SR+D+  Q    SIHVNPKYLE+Q LQQ+SRV+ A+
Sbjct: 216 GNTTSRTDTLSQGPPQSIHVNPKYLEKQRLQQSSRVNLAK 255


>XP_013468061.1 RNA polymerase II-binding domain protein [Medicago truncatula]
           KEH42098.1 RNA polymerase II-binding domain protein
           [Medicago truncatula]
          Length = 1021

 Score =  251 bits (641), Expect = 4e-72
 Identities = 124/158 (78%), Positives = 136/158 (86%)
 Frame = +3

Query: 3   TFNSKPIITNLTIIAGENVHAAKAIVATVCANILEVPSEQKLPSLYLLDSIVKNIQSDYI 182
           TFNSKP+ITNLTIIAGEN    KAI AT+CANILEVPSEQKLPSLYLLDSIVKNI  DYI
Sbjct: 94  TFNSKPMITNLTIIAGENQAGQKAIAATICANILEVPSEQKLPSLYLLDSIVKNIGQDYI 153

Query: 183 KYFAARLPEVFCKAYRRVDASVHSSMRHLFGTWKGVFPPVTLQMIEKELSFTPVVNGSIS 362
           KYFAA+LPEVFCKAY++VD SV  SM+HLFGTWKGVFPP TLQ+I+KEL FTPV+NGS S
Sbjct: 154 KYFAAKLPEVFCKAYKQVDPSVRQSMKHLFGTWKGVFPPQTLQIIDKELGFTPVINGSSS 213

Query: 363 VATASRSDSQLQHSQLSIHVNPKYLERQHLQQTSRVSG 476
            +TA RSDSQ +HS  SIHVNPKY ERQ LQQ+SR  G
Sbjct: 214 ASTALRSDSQSKHSPHSIHVNPKYFERQRLQQSSRTKG 251


>XP_013468060.1 RNA polymerase II-binding domain protein [Medicago truncatula]
           KEH42097.1 RNA polymerase II-binding domain protein
           [Medicago truncatula]
          Length = 1041

 Score =  251 bits (641), Expect = 4e-72
 Identities = 124/158 (78%), Positives = 136/158 (86%)
 Frame = +3

Query: 3   TFNSKPIITNLTIIAGENVHAAKAIVATVCANILEVPSEQKLPSLYLLDSIVKNIQSDYI 182
           TFNSKP+ITNLTIIAGEN    KAI AT+CANILEVPSEQKLPSLYLLDSIVKNI  DYI
Sbjct: 94  TFNSKPMITNLTIIAGENQAGQKAIAATICANILEVPSEQKLPSLYLLDSIVKNIGQDYI 153

Query: 183 KYFAARLPEVFCKAYRRVDASVHSSMRHLFGTWKGVFPPVTLQMIEKELSFTPVVNGSIS 362
           KYFAA+LPEVFCKAY++VD SV  SM+HLFGTWKGVFPP TLQ+I+KEL FTPV+NGS S
Sbjct: 154 KYFAAKLPEVFCKAYKQVDPSVRQSMKHLFGTWKGVFPPQTLQIIDKELGFTPVINGSSS 213

Query: 363 VATASRSDSQLQHSQLSIHVNPKYLERQHLQQTSRVSG 476
            +TA RSDSQ +HS  SIHVNPKY ERQ LQQ+SR  G
Sbjct: 214 ASTALRSDSQSKHSPHSIHVNPKYFERQRLQQSSRTKG 251


>XP_007027621.2 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X3
           [Theobroma cacao]
          Length = 1091

 Score =  251 bits (642), Expect = 5e-72
 Identities = 126/158 (79%), Positives = 134/158 (84%)
 Frame = +3

Query: 3   TFNSKPIITNLTIIAGENVHAAKAIVATVCANILEVPSEQKLPSLYLLDSIVKNIQSDYI 182
           TFNSKPIITNLTIIAGEN+HAAKAI +TVCANILEVPS+QKLPSLYLLDSIVKNI  DYI
Sbjct: 99  TFNSKPIITNLTIIAGENLHAAKAIASTVCANILEVPSDQKLPSLYLLDSIVKNIGRDYI 158

Query: 183 KYFAARLPEVFCKAYRRVDASVHSSMRHLFGTWKGVFPPVTLQMIEKELSFTPVVNGSIS 362
           KYFAARLPEVFCKAYR+VD  VH SMRHLFGTWKGVFPP  LQMIEKEL F P++NGS S
Sbjct: 159 KYFAARLPEVFCKAYRQVDPPVHQSMRHLFGTWKGVFPPQPLQMIEKELGFAPMINGSSS 218

Query: 363 VATASRSDSQLQHSQLSIHVNPKYLERQHLQQTSRVSG 476
             T SR D   Q    SIHVNPKYLE+Q LQQ+SRV G
Sbjct: 219 GTTTSRPDPLSQRPPHSIHVNPKYLEKQRLQQSSRVKG 256



 Score =  107 bits (266), Expect = 1e-21
 Identities = 83/245 (33%), Positives = 114/245 (46%), Gaps = 10/245 (4%)
 Frame = +3

Query: 330  SFTPVVNGSISVATASRSDSQLQHSQLSIHV---NPKYLERQHLQQTSRVSGAEKSSMXX 500
            S++  + G  + A++S +   ++  ++  +V   +   L +Q  Q     S  E+S M  
Sbjct: 483  SYSATIGGLPTGASSSLARIGMRPQKILANVASGSSSTLGQQRFQALGTASPPEQSPMRQ 542

Query: 501  XXXXXXXXXXXXCQNLQSLAEKDYPHAPPLSRPDLKTSSFPGLVNAGPHGHSPKDLLSIL 680
                         Q LQ LAE+DYP A  L R D K S F G +N G H HS +      
Sbjct: 543  HSPSPSFPGRHPHQQLQKLAEQDYPQAHSLPRTDPKPSHFSGKLNVGSHKHSSQ------ 596

Query: 681  HSSSQLGNLQKIHPQDLKGSSPAITSFQLNRHYP-PQLLQSDCKQPETSGHSQKPLLPQV 857
                               SS  I+S+Q + HYP  Q  Q D  Q E S  +QKPLL Q+
Sbjct: 597  ------------------ASSALISSYQPSCHYPFGQPPQPDSVQAEPSSQTQKPLLSQI 638

Query: 858  SNFGTPSSREAVSDRSNPLDTEASRQSGTSSLLAAVLKS------SITDGLANQALQEVG 1019
            S  G  S+    S+++NPL    S  S TSSLLAAV+KS      S T  L N+  Q+VG
Sbjct: 639  SKVGAASTLGIASEQANPLAIGTSELSSTSSLLAAVMKSGILSSNSFTGSLPNKISQDVG 698

Query: 1020 QMPLQ 1034
            Q+P Q
Sbjct: 699  QIPSQ 703


>EOY08123.1 ENTH/VHS family protein, putative isoform 2 [Theobroma cacao]
          Length = 1091

 Score =  251 bits (642), Expect = 5e-72
 Identities = 126/158 (79%), Positives = 134/158 (84%)
 Frame = +3

Query: 3   TFNSKPIITNLTIIAGENVHAAKAIVATVCANILEVPSEQKLPSLYLLDSIVKNIQSDYI 182
           TFNSKPIITNLTIIAGEN+HAAKAI +TVCANILEVPS+QKLPSLYLLDSIVKNI  DYI
Sbjct: 99  TFNSKPIITNLTIIAGENLHAAKAIASTVCANILEVPSDQKLPSLYLLDSIVKNIGRDYI 158

Query: 183 KYFAARLPEVFCKAYRRVDASVHSSMRHLFGTWKGVFPPVTLQMIEKELSFTPVVNGSIS 362
           KYFAARLPEVFCKAYR+VD  VH SMRHLFGTWKGVFPP  LQMIEKEL F P++NGS S
Sbjct: 159 KYFAARLPEVFCKAYRQVDPPVHQSMRHLFGTWKGVFPPQPLQMIEKELGFAPMINGSSS 218

Query: 363 VATASRSDSQLQHSQLSIHVNPKYLERQHLQQTSRVSG 476
             T SR D   Q    SIHVNPKYLE+Q LQQ+SRV G
Sbjct: 219 GTTTSRPDPLSQRPPHSIHVNPKYLEKQRLQQSSRVKG 256



 Score =  104 bits (259), Expect = 8e-21
 Identities = 82/245 (33%), Positives = 113/245 (46%), Gaps = 10/245 (4%)
 Frame = +3

Query: 330  SFTPVVNGSISVATASRSDSQLQHSQLSIHV---NPKYLERQHLQQTSRVSGAEKSSMXX 500
            S++  + G  + A++S +   ++  ++  +V   +   L +Q  Q     S  E+S M  
Sbjct: 483  SYSATIGGLPTGASSSLARIGMRPQKILANVASGSTSTLGQQRFQPLGTASPPEQSPMRQ 542

Query: 501  XXXXXXXXXXXXCQNLQSLAEKDYPHAPPLSRPDLKTSSFPGLVNAGPHGHSPKDLLSIL 680
                         Q LQ LAE+DYP A  L R D K S F G +N G H HS +      
Sbjct: 543  HSPSPSFPGRHPHQQLQKLAEQDYPQAHSLPRTDPKPSHFSGKLNVGSHKHSSQ------ 596

Query: 681  HSSSQLGNLQKIHPQDLKGSSPAITSFQLNRHYP-PQLLQSDCKQPETSGHSQKPLLPQV 857
                               SS  I+S+Q + HYP  Q  Q D  Q E S  +QKPL  Q+
Sbjct: 597  ------------------ASSALISSYQPSCHYPFGQPPQPDSVQAEPSSQTQKPLPSQI 638

Query: 858  SNFGTPSSREAVSDRSNPLDTEASRQSGTSSLLAAVLKS------SITDGLANQALQEVG 1019
            S  G  S+    S+++NPL    S  S TSSLLAAV+KS      S T  L N+  Q+VG
Sbjct: 639  SKVGAASTLGIASEQANPLAIGTSELSSTSSLLAAVMKSGILSSNSFTGSLPNKISQDVG 698

Query: 1020 QMPLQ 1034
            Q+P Q
Sbjct: 699  QIPSQ 703


>XP_017977036.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
           [Theobroma cacao]
          Length = 1122

 Score =  251 bits (642), Expect = 6e-72
 Identities = 126/158 (79%), Positives = 134/158 (84%)
 Frame = +3

Query: 3   TFNSKPIITNLTIIAGENVHAAKAIVATVCANILEVPSEQKLPSLYLLDSIVKNIQSDYI 182
           TFNSKPIITNLTIIAGEN+HAAKAI +TVCANILEVPS+QKLPSLYLLDSIVKNI  DYI
Sbjct: 99  TFNSKPIITNLTIIAGENLHAAKAIASTVCANILEVPSDQKLPSLYLLDSIVKNIGRDYI 158

Query: 183 KYFAARLPEVFCKAYRRVDASVHSSMRHLFGTWKGVFPPVTLQMIEKELSFTPVVNGSIS 362
           KYFAARLPEVFCKAYR+VD  VH SMRHLFGTWKGVFPP  LQMIEKEL F P++NGS S
Sbjct: 159 KYFAARLPEVFCKAYRQVDPPVHQSMRHLFGTWKGVFPPQPLQMIEKELGFAPMINGSSS 218

Query: 363 VATASRSDSQLQHSQLSIHVNPKYLERQHLQQTSRVSG 476
             T SR D   Q    SIHVNPKYLE+Q LQQ+SRV G
Sbjct: 219 GTTTSRPDPLSQRPPHSIHVNPKYLEKQRLQQSSRVKG 256



 Score =  107 bits (266), Expect = 1e-21
 Identities = 83/245 (33%), Positives = 114/245 (46%), Gaps = 10/245 (4%)
 Frame = +3

Query: 330  SFTPVVNGSISVATASRSDSQLQHSQLSIHV---NPKYLERQHLQQTSRVSGAEKSSMXX 500
            S++  + G  + A++S +   ++  ++  +V   +   L +Q  Q     S  E+S M  
Sbjct: 514  SYSATIGGLPTGASSSLARIGMRPQKILANVASGSSSTLGQQRFQALGTASPPEQSPMRQ 573

Query: 501  XXXXXXXXXXXXCQNLQSLAEKDYPHAPPLSRPDLKTSSFPGLVNAGPHGHSPKDLLSIL 680
                         Q LQ LAE+DYP A  L R D K S F G +N G H HS +      
Sbjct: 574  HSPSPSFPGRHPHQQLQKLAEQDYPQAHSLPRTDPKPSHFSGKLNVGSHKHSSQ------ 627

Query: 681  HSSSQLGNLQKIHPQDLKGSSPAITSFQLNRHYP-PQLLQSDCKQPETSGHSQKPLLPQV 857
                               SS  I+S+Q + HYP  Q  Q D  Q E S  +QKPLL Q+
Sbjct: 628  ------------------ASSALISSYQPSCHYPFGQPPQPDSVQAEPSSQTQKPLLSQI 669

Query: 858  SNFGTPSSREAVSDRSNPLDTEASRQSGTSSLLAAVLKS------SITDGLANQALQEVG 1019
            S  G  S+    S+++NPL    S  S TSSLLAAV+KS      S T  L N+  Q+VG
Sbjct: 670  SKVGAASTLGIASEQANPLAIGTSELSSTSSLLAAVMKSGILSSNSFTGSLPNKISQDVG 729

Query: 1020 QMPLQ 1034
            Q+P Q
Sbjct: 730  QIPSQ 734


>XP_007027620.2 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
           [Theobroma cacao]
          Length = 1125

 Score =  251 bits (642), Expect = 6e-72
 Identities = 126/158 (79%), Positives = 134/158 (84%)
 Frame = +3

Query: 3   TFNSKPIITNLTIIAGENVHAAKAIVATVCANILEVPSEQKLPSLYLLDSIVKNIQSDYI 182
           TFNSKPIITNLTIIAGEN+HAAKAI +TVCANILEVPS+QKLPSLYLLDSIVKNI  DYI
Sbjct: 99  TFNSKPIITNLTIIAGENLHAAKAIASTVCANILEVPSDQKLPSLYLLDSIVKNIGRDYI 158

Query: 183 KYFAARLPEVFCKAYRRVDASVHSSMRHLFGTWKGVFPPVTLQMIEKELSFTPVVNGSIS 362
           KYFAARLPEVFCKAYR+VD  VH SMRHLFGTWKGVFPP  LQMIEKEL F P++NGS S
Sbjct: 159 KYFAARLPEVFCKAYRQVDPPVHQSMRHLFGTWKGVFPPQPLQMIEKELGFAPMINGSSS 218

Query: 363 VATASRSDSQLQHSQLSIHVNPKYLERQHLQQTSRVSG 476
             T SR D   Q    SIHVNPKYLE+Q LQQ+SRV G
Sbjct: 219 GTTTSRPDPLSQRPPHSIHVNPKYLEKQRLQQSSRVKG 256



 Score =  107 bits (266), Expect = 1e-21
 Identities = 83/245 (33%), Positives = 114/245 (46%), Gaps = 10/245 (4%)
 Frame = +3

Query: 330  SFTPVVNGSISVATASRSDSQLQHSQLSIHV---NPKYLERQHLQQTSRVSGAEKSSMXX 500
            S++  + G  + A++S +   ++  ++  +V   +   L +Q  Q     S  E+S M  
Sbjct: 517  SYSATIGGLPTGASSSLARIGMRPQKILANVASGSSSTLGQQRFQALGTASPPEQSPMRQ 576

Query: 501  XXXXXXXXXXXXCQNLQSLAEKDYPHAPPLSRPDLKTSSFPGLVNAGPHGHSPKDLLSIL 680
                         Q LQ LAE+DYP A  L R D K S F G +N G H HS +      
Sbjct: 577  HSPSPSFPGRHPHQQLQKLAEQDYPQAHSLPRTDPKPSHFSGKLNVGSHKHSSQ------ 630

Query: 681  HSSSQLGNLQKIHPQDLKGSSPAITSFQLNRHYP-PQLLQSDCKQPETSGHSQKPLLPQV 857
                               SS  I+S+Q + HYP  Q  Q D  Q E S  +QKPLL Q+
Sbjct: 631  ------------------ASSALISSYQPSCHYPFGQPPQPDSVQAEPSSQTQKPLLSQI 672

Query: 858  SNFGTPSSREAVSDRSNPLDTEASRQSGTSSLLAAVLKS------SITDGLANQALQEVG 1019
            S  G  S+    S+++NPL    S  S TSSLLAAV+KS      S T  L N+  Q+VG
Sbjct: 673  SKVGAASTLGIASEQANPLAIGTSELSSTSSLLAAVMKSGILSSNSFTGSLPNKISQDVG 732

Query: 1020 QMPLQ 1034
            Q+P Q
Sbjct: 733  QIPSQ 737


>EOY08122.1 ENTH/VHS family protein, putative isoform 1 [Theobroma cacao]
          Length = 1125

 Score =  251 bits (642), Expect = 6e-72
 Identities = 126/158 (79%), Positives = 134/158 (84%)
 Frame = +3

Query: 3   TFNSKPIITNLTIIAGENVHAAKAIVATVCANILEVPSEQKLPSLYLLDSIVKNIQSDYI 182
           TFNSKPIITNLTIIAGEN+HAAKAI +TVCANILEVPS+QKLPSLYLLDSIVKNI  DYI
Sbjct: 99  TFNSKPIITNLTIIAGENLHAAKAIASTVCANILEVPSDQKLPSLYLLDSIVKNIGRDYI 158

Query: 183 KYFAARLPEVFCKAYRRVDASVHSSMRHLFGTWKGVFPPVTLQMIEKELSFTPVVNGSIS 362
           KYFAARLPEVFCKAYR+VD  VH SMRHLFGTWKGVFPP  LQMIEKEL F P++NGS S
Sbjct: 159 KYFAARLPEVFCKAYRQVDPPVHQSMRHLFGTWKGVFPPQPLQMIEKELGFAPMINGSSS 218

Query: 363 VATASRSDSQLQHSQLSIHVNPKYLERQHLQQTSRVSG 476
             T SR D   Q    SIHVNPKYLE+Q LQQ+SRV G
Sbjct: 219 GTTTSRPDPLSQRPPHSIHVNPKYLEKQRLQQSSRVKG 256



 Score =  104 bits (259), Expect = 8e-21
 Identities = 82/245 (33%), Positives = 113/245 (46%), Gaps = 10/245 (4%)
 Frame = +3

Query: 330  SFTPVVNGSISVATASRSDSQLQHSQLSIHV---NPKYLERQHLQQTSRVSGAEKSSMXX 500
            S++  + G  + A++S +   ++  ++  +V   +   L +Q  Q     S  E+S M  
Sbjct: 517  SYSATIGGLPTGASSSLARIGMRPQKILANVASGSTSTLGQQRFQPLGTASPPEQSPMRQ 576

Query: 501  XXXXXXXXXXXXCQNLQSLAEKDYPHAPPLSRPDLKTSSFPGLVNAGPHGHSPKDLLSIL 680
                         Q LQ LAE+DYP A  L R D K S F G +N G H HS +      
Sbjct: 577  HSPSPSFPGRHPHQQLQKLAEQDYPQAHSLPRTDPKPSHFSGKLNVGSHKHSSQ------ 630

Query: 681  HSSSQLGNLQKIHPQDLKGSSPAITSFQLNRHYP-PQLLQSDCKQPETSGHSQKPLLPQV 857
                               SS  I+S+Q + HYP  Q  Q D  Q E S  +QKPL  Q+
Sbjct: 631  ------------------ASSALISSYQPSCHYPFGQPPQPDSVQAEPSSQTQKPLPSQI 672

Query: 858  SNFGTPSSREAVSDRSNPLDTEASRQSGTSSLLAAVLKS------SITDGLANQALQEVG 1019
            S  G  S+    S+++NPL    S  S TSSLLAAV+KS      S T  L N+  Q+VG
Sbjct: 673  SKVGAASTLGIASEQANPLAIGTSELSSTSSLLAAVMKSGILSSNSFTGSLPNKISQDVG 732

Query: 1020 QMPLQ 1034
            Q+P Q
Sbjct: 733  QIPSQ 737