BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00019880
         (1352 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KDO53372.1 hypothetical protein CISIN_1g018587mg [Citrus sinensis]    461   e-159
XP_006427873.1 hypothetical protein CICLE_v10025964mg [Citrus cl...   460   e-158
XP_017984558.1 PREDICTED: probable mediator of RNA polymerase II...   371   e-123
XP_007048434.2 PREDICTED: probable mediator of RNA polymerase II...   370   e-123
KDO53373.1 hypothetical protein CISIN_1g018587mg [Citrus sinensis]    367   e-122
OAY36027.1 hypothetical protein MANES_12G149500 [Manihot esculenta]   369   e-122
GAV79269.1 Med26 domain-containing protein [Cephalotus follicula...   369   e-122
OMO85762.1 hypothetical protein COLO4_21459 [Corchorus olitorius]     367   e-122
XP_006427872.1 hypothetical protein CICLE_v10025964mg [Citrus cl...   365   e-122
XP_002530078.1 PREDICTED: probable mediator of RNA polymerase II...   368   e-122
EOX92591.1 Transcription elongation factor (TFIIS) family protei...   367   e-122
XP_016728045.1 PREDICTED: probable mediator of RNA polymerase II...   366   e-121
XP_017984557.1 PREDICTED: probable mediator of RNA polymerase II...   366   e-121
XP_016724383.1 PREDICTED: probable mediator of RNA polymerase II...   366   e-121
XP_016728041.1 PREDICTED: probable mediator of RNA polymerase II...   366   e-121
XP_012458765.1 PREDICTED: probable mediator of RNA polymerase II...   365   e-121
XP_016724382.1 PREDICTED: probable mediator of RNA polymerase II...   365   e-121
XP_012458764.1 PREDICTED: probable mediator of RNA polymerase II...   365   e-121
XP_016754190.1 PREDICTED: probable mediator of RNA polymerase II...   365   e-121
XP_012451443.1 PREDICTED: probable mediator of RNA polymerase II...   365   e-121

>KDO53372.1 hypothetical protein CISIN_1g018587mg [Citrus sinensis]
          Length = 353

 Score =  461 bits (1187), Expect = e-159
 Identities = 251/362 (69%), Positives = 265/362 (73%), Gaps = 4/362 (1%)
 Frame = -1

Query: 1217 MDLDNFRSVLETAGVDVWTFIDTAILVASLDYATELKQRRDKIVERLYSTCIASRCSNCD 1038
            MDLD+FRS+L+TAGVDVWTFIDTAILVASLDYATELK+RRDKIVERLY+TCIASRC NCD
Sbjct: 1    MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60

Query: 1037 FGGDVVKVDKEISHXXXXXXXXXDEAIKALQAASPSTPHSVNVNVXXXXXXXXXXXXG-- 864
            FG  VV V+KEIS           + +KA Q ASPSTPHSVN +                
Sbjct: 61   FGNGVVDVNKEISRGQH-------DEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYG 113

Query: 863  -LFDDEPKRILEIKEHLEDPDQSEXXXXXXXXXXXXXXITFKALKETDIGRHVNRLRKHS 687
             LFDDE KRILEIKEHLEDPDQSE              ITFKALKETDIGRHVN+LRKHS
Sbjct: 114  GLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHS 173

Query: 686  SNDVRRLVKHLVRKWKDIVDEWVRLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFALS 507
            SNDVR+LVKHLVRKWKDIVDEWV+LNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFA S
Sbjct: 174  SNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYS 233

Query: 506  PNPHNGSSGSDKNNSXXXXXXXXXXXXXXXXXXXXXXXXXXATTSHSVQRPREQKESRES 327
            PNPHNGSSGSDKNNS                              HSVQRPREQKESRES
Sbjct: 234  PNPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRES 293

Query: 326  TFDSD-RLASARKRLQENYKKEENAKRQRTIQVMDIHEIXXXXXXXXXXXXXKGGGSQGR 150
            TFD+D RLASARKRLQENYK+EENAKRQRTIQVMDIHEI             KGG SQGR
Sbjct: 294  TFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEI--PKPKNAFFGKNKGGSSQGR 351

Query: 149  HW 144
            HW
Sbjct: 352  HW 353


>XP_006427873.1 hypothetical protein CICLE_v10025964mg [Citrus clementina]
            XP_006464554.1 PREDICTED: probable mediator of RNA
            polymerase II transcription subunit 26c [Citrus sinensis]
            ESR41113.1 hypothetical protein CICLE_v10025964mg [Citrus
            clementina]
          Length = 353

 Score =  460 bits (1183), Expect = e-158
 Identities = 250/362 (69%), Positives = 265/362 (73%), Gaps = 4/362 (1%)
 Frame = -1

Query: 1217 MDLDNFRSVLETAGVDVWTFIDTAILVASLDYATELKQRRDKIVERLYSTCIASRCSNCD 1038
            MDL++FRS+L+TAGVDVWTFIDTAILVASLDYATELK+RRDKIVERLY+TCIASRC NCD
Sbjct: 1    MDLEDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60

Query: 1037 FGGDVVKVDKEISHXXXXXXXXXDEAIKALQAASPSTPHSVNVNVXXXXXXXXXXXXG-- 864
            FG  VV V+KEIS           + +KA Q ASPSTPHSVN +                
Sbjct: 61   FGNGVVDVNKEISRGQH-------DEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYG 113

Query: 863  -LFDDEPKRILEIKEHLEDPDQSEXXXXXXXXXXXXXXITFKALKETDIGRHVNRLRKHS 687
             LFDDE KRILEIKEHLEDPDQSE              ITFKALKETDIGRHVN+LRKHS
Sbjct: 114  GLFDDEQKRILEIKEHLEDPDQSEDSLIDLLQSLADMDITFKALKETDIGRHVNQLRKHS 173

Query: 686  SNDVRRLVKHLVRKWKDIVDEWVRLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFALS 507
            SNDVR+LVKHLVRKWKDIVDEWV+LNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFA S
Sbjct: 174  SNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYS 233

Query: 506  PNPHNGSSGSDKNNSXXXXXXXXXXXXXXXXXXXXXXXXXXATTSHSVQRPREQKESRES 327
            PNPHNGSSGSDKNNS                              HSVQRPREQKESRES
Sbjct: 234  PNPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRES 293

Query: 326  TFDSD-RLASARKRLQENYKKEENAKRQRTIQVMDIHEIXXXXXXXXXXXXXKGGGSQGR 150
            TFD+D RLASARKRLQENYK+EENAKRQRTIQVMDIHEI             KGG SQGR
Sbjct: 294  TFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEI--PKPKNAFFGKNKGGSSQGR 351

Query: 149  HW 144
            HW
Sbjct: 352  HW 353


>XP_017984558.1 PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c isoform X2 [Theobroma cacao] EOY19919.1
            Transcription elongation factor (TFIIS) family protein,
            putative isoform 1 [Theobroma cacao]
          Length = 337

 Score =  371 bits (952), Expect = e-123
 Identities = 214/360 (59%), Positives = 240/360 (66%), Gaps = 2/360 (0%)
 Frame = -1

Query: 1217 MDLDNFRSVLETAGVDVWTFIDTAILVASLDYATELKQRRDKIVERLYSTCIASRCSNCD 1038
            MDLD+FRSVLETAGVDVWTFID+AILVASLDY  ELKQRRD IVERLY+T + +RC +CD
Sbjct: 1    MDLDDFRSVLETAGVDVWTFIDSAILVASLDYGQELKQRRDGIVERLYATSMVTRCKSCD 60

Query: 1037 FG--GDVVKVDKEISHXXXXXXXXXDEAIKALQAASPSTPHSVNVNVXXXXXXXXXXXXG 864
            FG   +  +V+KE S           E        SP TP S N +             G
Sbjct: 61   FGERSNGYQVNKEGSPNEGKGGEGGRE--------SPFTPQSDNED------GDLDPYGG 106

Query: 863  LFDDEPKRILEIKEHLEDPDQSEXXXXXXXXXXXXXXITFKALKETDIGRHVNRLRKHSS 684
            LFDDE KR+LEIKE LE+PDQSE              ITF+ALKETDIGRHVN+LRKHSS
Sbjct: 107  LFDDEQKRVLEIKESLEEPDQSEDSLVDLLQSLADMDITFQALKETDIGRHVNKLRKHSS 166

Query: 683  NDVRRLVKHLVRKWKDIVDEWVRLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFALSP 504
            NDVRRLVK LVRKWK+IVDEWVR+NQPGEL S+A+MDGDSPQQK+PQNG  QVPDFA SP
Sbjct: 167  NDVRRLVKQLVRKWKEIVDEWVRVNQPGELESAALMDGDSPQQKLPQNGRQQVPDFAYSP 226

Query: 503  NPHNGSSGSDKNNSXXXXXXXXXXXXXXXXXXXXXXXXXXATTSHSVQRPREQKESREST 324
            NPHNGS G +KNNS                          +T   +VQR REQK   ES 
Sbjct: 227  NPHNGSFGLEKNNS----EPERKPKPIPPPRKDPPPRPTHSTPPQNVQRQREQK---ESN 279

Query: 323  FDSDRLASARKRLQENYKKEENAKRQRTIQVMDIHEIXXXXXXXXXXXXXKGGGSQGRHW 144
            FDS+RLASARKRLQ NYK+ ENAK+QRTIQVMDIHE+             KGGGSQGRHW
Sbjct: 280  FDSERLASARKRLQANYKEAENAKKQRTIQVMDIHEL--PKPKNAFFGKNKGGGSQGRHW 337


>XP_007048434.2 PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c isoform X2 [Theobroma cacao]
          Length = 336

 Score =  370 bits (950), Expect = e-123
 Identities = 219/365 (60%), Positives = 241/365 (66%), Gaps = 7/365 (1%)
 Frame = -1

Query: 1217 MDLDNFRSVLETAGVDVWTFIDTAILVASLDYATELKQRRDKIVERLYSTCIASRCSNCD 1038
            MDLD+FRSVLETA VDVWTFIDTAILVASLDY  ELKQRRD+IVERLY+T + ++C NCD
Sbjct: 1    MDLDDFRSVLETAEVDVWTFIDTAILVASLDYGPELKQRRDRIVERLYATSMVTQCRNCD 60

Query: 1037 FGGDV----VKVD--KEISHXXXXXXXXXDEAIKALQAASPSTPHSVNVNVXXXXXXXXX 876
            FG       VK D  +E SH                +  SP+ P S N +          
Sbjct: 61   FGERPSDYEVKADLKRESSHEDKR------------RGGSPNAPQSDNGD------DELD 102

Query: 875  XXXGLFDDEPKRILEIKEHLEDPDQSEXXXXXXXXXXXXXXITFKALKETDIGRHVNRLR 696
               GLFDDE K+ILEIKEHLE+P QSE              ITF+ALKETDIGRHVN+LR
Sbjct: 103  PYGGLFDDEQKKILEIKEHLEEPHQSEDSLIDLLQSLADMDITFQALKETDIGRHVNKLR 162

Query: 695  KHSSNDVRRLVKHLVRKWKDIVDEWVRLNQPGELASSAMM-DGDSPQQKIPQNGNHQVPD 519
            KHSSNDVRRLVK LVRKWK+IVDEWVRLNQPGEL SSA+M DGDSPQQK PQNG HQVPD
Sbjct: 163  KHSSNDVRRLVKQLVRKWKEIVDEWVRLNQPGELESSALMADGDSPQQKPPQNGYHQVPD 222

Query: 518  FALSPNPHNGSSGSDKNNSXXXXXXXXXXXXXXXXXXXXXXXXXXATTSHSVQRPREQKE 339
            FA SPNPHNGSSGSDKNNS                           T S  V + R Q+E
Sbjct: 223  FAYSPNPHNGSSGSDKNNS--------EPERKPKPIPPRNEPPPKPTYSAPVLQNR-QRE 273

Query: 338  SRESTFDSDRLASARKRLQENYKKEENAKRQRTIQVMDIHEIXXXXXXXXXXXXXKGGGS 159
             +ES FDS+RLASARKRLQENYK+ ENAKRQRTIQVMDIHE+             KGG S
Sbjct: 274  QKESNFDSERLASARKRLQENYKEAENAKRQRTIQVMDIHEL--PKPKNAFFGKNKGGSS 331

Query: 158  QGRHW 144
            QGRHW
Sbjct: 332  QGRHW 336


>KDO53373.1 hypothetical protein CISIN_1g018587mg [Citrus sinensis]
          Length = 286

 Score =  367 bits (941), Expect = e-122
 Identities = 191/255 (74%), Positives = 203/255 (79%), Gaps = 3/255 (1%)
 Frame = -1

Query: 1217 MDLDNFRSVLETAGVDVWTFIDTAILVASLDYATELKQRRDKIVERLYSTCIASRCSNCD 1038
            MDLD+FRS+L+TAGVDVWTFIDTAILVASLDYATELK+RRDKIVERLY+TCIASRC NCD
Sbjct: 1    MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60

Query: 1037 FGGDVVKVDKEISHXXXXXXXXXDEAIKALQAASPSTPHSVNVNVXXXXXXXXXXXXG-- 864
            FG  VV V+KEIS           + +KA Q ASPSTPHSVN +                
Sbjct: 61   FGNGVVDVNKEISRGQH-------DEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYG 113

Query: 863  -LFDDEPKRILEIKEHLEDPDQSEXXXXXXXXXXXXXXITFKALKETDIGRHVNRLRKHS 687
             LFDDE KRILEIKEHLEDPDQSE              ITFKALKETDIGRHVN+LRKHS
Sbjct: 114  GLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHS 173

Query: 686  SNDVRRLVKHLVRKWKDIVDEWVRLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFALS 507
            SNDVR+LVKHLVRKWKDIVDEWV+LNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFA S
Sbjct: 174  SNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYS 233

Query: 506  PNPHNGSSGSDKNNS 462
            PNPHNGSSGSDKNNS
Sbjct: 234  PNPHNGSSGSDKNNS 248


>OAY36027.1 hypothetical protein MANES_12G149500 [Manihot esculenta]
          Length = 352

 Score =  369 bits (946), Expect = e-122
 Identities = 213/361 (59%), Positives = 243/361 (67%), Gaps = 3/361 (0%)
 Frame = -1

Query: 1217 MDLDNFRSVLETAGVDVWTFIDTAILVASLDYATELKQRRDKIVERLYSTCIASRCSNCD 1038
            MD+D+FRS+LE++GVDVWTFIDTAI+VASLD+ TELK+RRDKIVE LYSTC + RC NCD
Sbjct: 1    MDIDDFRSILESSGVDVWTFIDTAIVVASLDFGTELKERRDKIVEMLYSTCSSGRCRNCD 60

Query: 1037 FGGDVVKVDKEISHXXXXXXXXXDEAIKALQAASPSTPHSVNVNVXXXXXXXXXXXXGLF 858
            F  DV ++  E  H                  +  +TP S++ +             GLF
Sbjct: 61   F--DVGRISNE--HEMKENSIAVKVGGGGGSGSPSTTPRSIHGD--EEDDDELDPYAGLF 114

Query: 857  DDEPKRILEIKEHLEDPDQSEXXXXXXXXXXXXXXITFKALKETDIGRHVNRLRKHSSND 678
            DDE K+ILEIK+HLEDPDQSE              ITFKALKETDIGRHVNRLRK+SSND
Sbjct: 115  DDEQKKILEIKQHLEDPDQSEDSLVDLLQSLADMDITFKALKETDIGRHVNRLRKNSSND 174

Query: 677  VRRLVKHLVRKWKDIVDEWVRLNQPGELASSAMM-DGDSPQQKIPQNGNHQVPDFALSPN 501
            VRRLVK LVRKWK+IVD+WVRLN  GE ASSA+M DGDSPQQKIPQN +HQVPDFA SPN
Sbjct: 175  VRRLVKQLVRKWKEIVDDWVRLNPQGEHASSALMADGDSPQQKIPQNYHHQVPDFAYSPN 234

Query: 500  PHNGSSGSDKNNS--XXXXXXXXXXXXXXXXXXXXXXXXXXATTSHSVQRPREQKESRES 327
            P NGSSGSDKNNS                            A+ SH+VQR +EQ++ RE 
Sbjct: 235  PQNGSSGSDKNNSEPERKPKSVPRKEAPPRPTQQSLPASASASASHNVQRQKEQQQ-RER 293

Query: 326  TFDSDRLASARKRLQENYKKEENAKRQRTIQVMDIHEIXXXXXXXXXXXXXKGGGSQGRH 147
             FDSDRLASARKRLQENYK+  NAK+QRTIQVMDIHEI             KGGGSQGRH
Sbjct: 294  DFDSDRLASARKRLQENYKEALNAKKQRTIQVMDIHEI--PKPKNAYFAKNKGGGSQGRH 351

Query: 146  W 144
            W
Sbjct: 352  W 352


>GAV79269.1 Med26 domain-containing protein [Cephalotus follicularis]
          Length = 365

 Score =  369 bits (946), Expect = e-122
 Identities = 214/380 (56%), Positives = 245/380 (64%), Gaps = 21/380 (5%)
 Frame = -1

Query: 1220 IMDLDNFRSVLETAGVDVWTFIDTAILVASLDYATELKQRRDKIVERLYSTCIASRCSNC 1041
            +MDLD+FRS+L+TAGVDVW FIDTAILVASLDY  ELKQRRD+IVERLY++ I++ C NC
Sbjct: 4    MMDLDDFRSILDTAGVDVWAFIDTAILVASLDYGLELKQRRDQIVERLYASSISTLCKNC 63

Query: 1040 DF-----------GGDVVK------VDKEISHXXXXXXXXXDEAIKALQAASPSTPHSVN 912
            D            GG   K      V+K+  H             +     SP TP S++
Sbjct: 64   DEFDAAAVAAVAGGGRANKLQVKSPVEKDTCHD------------EGKGGTSPLTPQSLS 111

Query: 911  VNVXXXXXXXXXXXXGLFDDEPKRILEIKEHLEDPDQSEXXXXXXXXXXXXXXITFKALK 732
             +             GLFDDE KR+L+IK+HLEDPDQSE              ITFKALK
Sbjct: 112  GD----DEDDLDPYGGLFDDEQKRVLDIKDHLEDPDQSEDSLVDLLQSLADMDITFKALK 167

Query: 731  ETDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNQPGELASSAMM-DGDSPQQ 555
            ETDIGRHVNRLRKH SNDVRRLVK LVRKWK+IVDEWV+LN PGE+ASS +M DGDSPQQ
Sbjct: 168  ETDIGRHVNRLRKHPSNDVRRLVKQLVRKWKEIVDEWVKLNAPGEVASSVLMVDGDSPQQ 227

Query: 554  KIPQNGNHQVPDFALSPNPHNGSSGSDKNNSXXXXXXXXXXXXXXXXXXXXXXXXXXATT 375
            KIPQNG+HQVPDFA SPNPHN SSGSDKNNS                          A+ 
Sbjct: 228  KIPQNGHHQVPDFAYSPNPHNVSSGSDKNNSEVERKPKAIIPGKGAPTKPSQSANVSASA 287

Query: 374  SHSVQRPREQK---ESRESTFDSDRLASARKRLQENYKKEENAKRQRTIQVMDIHEIXXX 204
            SH+ QR R+QK   E ++S FDS+RLASARKRLQ NYK+ ENAK+QRTIQVMDIHEI   
Sbjct: 288  SHNAQRQRQQKEHEEEKDSNFDSERLASARKRLQMNYKEAENAKKQRTIQVMDIHEI--P 345

Query: 203  XXXXXXXXXXKGGGSQGRHW 144
                      KGGG QGRHW
Sbjct: 346  KPKNTFFGKNKGGGFQGRHW 365


>OMO85762.1 hypothetical protein COLO4_21459 [Corchorus olitorius]
          Length = 338

 Score =  367 bits (943), Expect = e-122
 Identities = 211/359 (58%), Positives = 236/359 (65%), Gaps = 1/359 (0%)
 Frame = -1

Query: 1217 MDLDNFRSVLETAGVDVWTFIDTAILVASLDYATELKQRRDKIVERLYSTCIASRCSNCD 1038
            MDLD+FRSVLETAGVDVWTFIDTAILVASLDY  ELKQRRD IVERLY+T + +RC  CD
Sbjct: 1    MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQELKQRRDGIVERLYATSMVTRCKGCD 60

Query: 1037 FGGDVVKVDKEISHXXXXXXXXXDEAIKALQAASPSTPHSVNVNVXXXXXXXXXXXXGLF 858
            FG      ++   H             +  +  SP TP   N +             GLF
Sbjct: 61   FG------ERSNGHQINKEGSPHGGKREEGEKGSPFTPQLDNED------DDLDPYGGLF 108

Query: 857  DDEPKRILEIKEHLEDPDQSEXXXXXXXXXXXXXXITFKALKETDIGRHVNRLRKHSSND 678
            DDE KR+LEIKE LE+PDQSE              ITF+ALKETDIGRHVN+LRKHSSN+
Sbjct: 109  DDEQKRVLEIKERLEEPDQSEDSLVDLLQSLADMDITFQALKETDIGRHVNKLRKHSSNE 168

Query: 677  VRRLVKHLVRKWKDIVDEWVRLNQPGELASSAMM-DGDSPQQKIPQNGNHQVPDFALSPN 501
            VRRLVK LVRKWK+IVDEWVR+NQPGEL S+A+M DGDSPQQK+PQNG  QVPDFA SPN
Sbjct: 169  VRRLVKQLVRKWKEIVDEWVRVNQPGELESAALMADGDSPQQKLPQNGRQQVPDFAYSPN 228

Query: 500  PHNGSSGSDKNNSXXXXXXXXXXXXXXXXXXXXXXXXXXATTSHSVQRPREQKESRESTF 321
            PHNGS GSDKNNS                          +T   +VQR REQK   ES F
Sbjct: 229  PHNGSFGSDKNNS----EPERKPKPIPPPRRDPPPRPTHSTPPQNVQRQREQK---ESNF 281

Query: 320  DSDRLASARKRLQENYKKEENAKRQRTIQVMDIHEIXXXXXXXXXXXXXKGGGSQGRHW 144
            DS+RLASARKRLQ NYK+ ENAK+QRTIQVMDIHE+             KGGGSQGRHW
Sbjct: 282  DSERLASARKRLQANYKEAENAKKQRTIQVMDIHEL--PKPKNAFFAKNKGGGSQGRHW 338


>XP_006427872.1 hypothetical protein CICLE_v10025964mg [Citrus clementina] ESR41112.1
            hypothetical protein CICLE_v10025964mg [Citrus
            clementina]
          Length = 286

 Score =  365 bits (937), Expect = e-122
 Identities = 190/255 (74%), Positives = 203/255 (79%), Gaps = 3/255 (1%)
 Frame = -1

Query: 1217 MDLDNFRSVLETAGVDVWTFIDTAILVASLDYATELKQRRDKIVERLYSTCIASRCSNCD 1038
            MDL++FRS+L+TAGVDVWTFIDTAILVASLDYATELK+RRDKIVERLY+TCIASRC NCD
Sbjct: 1    MDLEDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60

Query: 1037 FGGDVVKVDKEISHXXXXXXXXXDEAIKALQAASPSTPHSVNVNVXXXXXXXXXXXXG-- 864
            FG  VV V+KEIS           + +KA Q ASPSTPHSVN +                
Sbjct: 61   FGNGVVDVNKEISRGQH-------DEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYG 113

Query: 863  -LFDDEPKRILEIKEHLEDPDQSEXXXXXXXXXXXXXXITFKALKETDIGRHVNRLRKHS 687
             LFDDE KRILEIKEHLEDPDQSE              ITFKALKETDIGRHVN+LRKHS
Sbjct: 114  GLFDDEQKRILEIKEHLEDPDQSEDSLIDLLQSLADMDITFKALKETDIGRHVNQLRKHS 173

Query: 686  SNDVRRLVKHLVRKWKDIVDEWVRLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFALS 507
            SNDVR+LVKHLVRKWKDIVDEWV+LNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFA S
Sbjct: 174  SNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYS 233

Query: 506  PNPHNGSSGSDKNNS 462
            PNPHNGSSGSDKNNS
Sbjct: 234  PNPHNGSSGSDKNNS 248


>XP_002530078.1 PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c isoform X2 [Ricinus communis] EEF32318.1
            conserved hypothetical protein [Ricinus communis]
          Length = 362

 Score =  368 bits (944), Expect = e-122
 Identities = 211/368 (57%), Positives = 241/368 (65%), Gaps = 10/368 (2%)
 Frame = -1

Query: 1217 MDLDNFRSVLETAGVDVWTFIDTAILVASLDYATELKQRRDKIVERLYSTCIASRCSNCD 1038
            MD+D+FRS+LE++GVDVWTFIDTAI+VASLD+  ELKQRRDKIVE LYS+  + RC NCD
Sbjct: 1    MDVDDFRSILESSGVDVWTFIDTAIVVASLDFGNELKQRRDKIVEMLYSS--SGRCRNCD 58

Query: 1037 FGGDVVKVD-----KEISHXXXXXXXXXDEAIKALQAASPSTPHSVNV----NVXXXXXX 885
               DV +++     KE SH              +    S      V+V    +       
Sbjct: 59   L--DVGRINNGHEIKERSHLESKGGGGGGSGSPSTTPRSIHGDEDVDVVNDDDDDDDDDD 116

Query: 884  XXXXXXGLFDDEPKRILEIKEHLEDPDQSEXXXXXXXXXXXXXXITFKALKETDIGRHVN 705
                  GLFDDE K+ILEIK+HLEDPDQSE              ITFKALKETDIGRHVN
Sbjct: 117  GLDPYAGLFDDEQKKILEIKQHLEDPDQSEDSLVDLLQSLADMDITFKALKETDIGRHVN 176

Query: 704  RLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNQPGELASSAMM-DGDSPQQKIPQNGNHQ 528
            +LRKH+SNDVRRLVK LVRKWKDIVDEWV+LN PG+ ASS +M DGDSP+QK PQNG+HQ
Sbjct: 177  QLRKHTSNDVRRLVKQLVRKWKDIVDEWVKLNPPGQHASSGLMADGDSPRQKFPQNGHHQ 236

Query: 527  VPDFALSPNPHNGSSGSDKNNSXXXXXXXXXXXXXXXXXXXXXXXXXXATTSHSVQRPRE 348
            VPDFA SPNPHNGSSGSDKNNS                          A+ SH VQR RE
Sbjct: 237  VPDFAYSPNPHNGSSGSDKNNSEPERRPKPVPRKEAPPRPAQQSVPVSASASHIVQRQRE 296

Query: 347  QKESRESTFDSDRLASARKRLQENYKKEENAKRQRTIQVMDIHEIXXXXXXXXXXXXXKG 168
            Q+  RE+ FDSDRLASARKRLQ NYK+ ENAK+QRTIQVMDIHE+             KG
Sbjct: 297  QQ--RENNFDSDRLASARKRLQANYKEAENAKKQRTIQVMDIHELPKPKNKNTFFAKNKG 354

Query: 167  GGSQGRHW 144
            GGSQGRHW
Sbjct: 355  GGSQGRHW 362


>EOX92591.1 Transcription elongation factor (TFIIS) family protein, putative
            isoform 1 [Theobroma cacao] EOX92592.1 Transcription
            elongation factor (TFIIS) family protein, putative
            isoform 1 [Theobroma cacao]
          Length = 336

 Score =  367 bits (941), Expect = e-122
 Identities = 218/365 (59%), Positives = 240/365 (65%), Gaps = 7/365 (1%)
 Frame = -1

Query: 1217 MDLDNFRSVLETAGVDVWTFIDTAILVASLDYATELKQRRDKIVERLYSTCIASRCSNCD 1038
            MDLD+FRSVLETA VDVWTFIDTAILVASLDY  ELKQRRD+IVERLY+T + ++C NCD
Sbjct: 1    MDLDDFRSVLETAEVDVWTFIDTAILVASLDYGPELKQRRDRIVERLYATSMVTQCRNCD 60

Query: 1037 FGGDV----VKVD--KEISHXXXXXXXXXDEAIKALQAASPSTPHSVNVNVXXXXXXXXX 876
            FG       VK D  +E SH                +  SP+ P S N +          
Sbjct: 61   FGERPSDYEVKADLKRESSHEDKR------------RGGSPNAPQSDNGD------DELD 102

Query: 875  XXXGLFDDEPKRILEIKEHLEDPDQSEXXXXXXXXXXXXXXITFKALKETDIGRHVNRLR 696
               GLFDDE K+ILEIKEHLE+P QSE              ITF+ALKETDIGRHVN LR
Sbjct: 103  PYGGLFDDEQKKILEIKEHLEEPHQSEDSLIDLLQSLADMDITFQALKETDIGRHVNILR 162

Query: 695  KHSSNDVRRLVKHLVRKWKDIVDEWVRLNQPGELASSAMM-DGDSPQQKIPQNGNHQVPD 519
            KHSSNDVRRLVK LVRKWK+IVDEWVRLNQPGEL SSA+M DGDSPQ+K PQNG HQVPD
Sbjct: 163  KHSSNDVRRLVKQLVRKWKEIVDEWVRLNQPGELESSALMADGDSPQRKPPQNGYHQVPD 222

Query: 518  FALSPNPHNGSSGSDKNNSXXXXXXXXXXXXXXXXXXXXXXXXXXATTSHSVQRPREQKE 339
            FA SPNPHNGSSGSDKNNS                           T S  V + R Q+E
Sbjct: 223  FAYSPNPHNGSSGSDKNNS--------EPERKPKPIPPRNEPPPKPTYSAPVLQNR-QRE 273

Query: 338  SRESTFDSDRLASARKRLQENYKKEENAKRQRTIQVMDIHEIXXXXXXXXXXXXXKGGGS 159
             +ES FDS+RLASARKRLQENYK+ ENAKRQRTIQVMDIHE+             KGG S
Sbjct: 274  QKESNFDSERLASARKRLQENYKEAENAKRQRTIQVMDIHEL--PKPKNAFFGKNKGGSS 331

Query: 158  QGRHW 144
            QGRHW
Sbjct: 332  QGRHW 336


>XP_016728045.1 PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c isoform X2 [Gossypium hirsutum]
          Length = 336

 Score =  366 bits (940), Expect = e-121
 Identities = 213/361 (59%), Positives = 239/361 (66%), Gaps = 3/361 (0%)
 Frame = -1

Query: 1217 MDLDNFRSVLETAGVDVWTFIDTAILVASLDYATELKQRRDKIVERLYSTCIASRCSNCD 1038
            MDLD+FRSVLETAGVDVWTFIDTAILVASLDY  E KQRRD IVERLY+T + +RC +CD
Sbjct: 1    MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQEFKQRRDGIVERLYATSMVTRCKSCD 60

Query: 1037 FG--GDVVKVDKEISHXXXXXXXXXDEAIKALQAASPSTPHSVNVNVXXXXXXXXXXXXG 864
            FG   +V +V+KE S              K     SP TPHS N +             G
Sbjct: 61   FGERSNVYQVNKEDSPHEG----------KGGGKGSPFTPHSENED------DDMDPYGG 104

Query: 863  LFDDEPKRILEIKEHLEDPDQSEXXXXXXXXXXXXXXITFKALKETDIGRHVNRLRKHSS 684
            LFDDE KR+LEIKE LE PDQSE              ITF+ALKETDIGRHVN+LRKHSS
Sbjct: 105  LFDDEQKRVLEIKERLELPDQSEDSLVDLLQSLADMDITFQALKETDIGRHVNKLRKHSS 164

Query: 683  NDVRRLVKHLVRKWKDIVDEWVRLNQPGELASSAMM-DGDSPQQKIPQNGNHQVPDFALS 507
            NDVRRLVK LVRKWK+IVDEWVR+NQPGE   + +M DGDSPQQK+PQNG  QVPDFA S
Sbjct: 165  NDVRRLVKQLVRKWKEIVDEWVRVNQPGEPEPAGLMADGDSPQQKLPQNGRQQVPDFAYS 224

Query: 506  PNPHNGSSGSDKNNSXXXXXXXXXXXXXXXXXXXXXXXXXXATTSHSVQRPREQKESRES 327
            PNPHNGS GS+KNNS                          +T   +VQR REQK   ES
Sbjct: 225  PNPHNGSFGSEKNNS----EPERKPKPIPPSRKDPPPRHTHSTPPQNVQRQREQK---ES 277

Query: 326  TFDSDRLASARKRLQENYKKEENAKRQRTIQVMDIHEIXXXXXXXXXXXXXKGGGSQGRH 147
             FDS+RLASARKRLQE+YK+ ENAK+QRT+QVMDIHE+             KGGGSQGRH
Sbjct: 278  NFDSERLASARKRLQESYKEAENAKKQRTVQVMDIHEL--PKPKNAFFAKNKGGGSQGRH 335

Query: 146  W 144
            W
Sbjct: 336  W 336


>XP_017984557.1 PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c isoform X1 [Theobroma cacao]
          Length = 338

 Score =  366 bits (940), Expect = e-121
 Identities = 214/361 (59%), Positives = 240/361 (66%), Gaps = 3/361 (0%)
 Frame = -1

Query: 1217 MDLDNFRSVLETAGVDVWTFIDTAILVASLDYATELKQRRDKIVERLYSTCIASRCSNCD 1038
            MDLD+FRSVLETAGVDVWTFID+AILVASLDY  ELKQRRD IVERLY+T + +RC +CD
Sbjct: 1    MDLDDFRSVLETAGVDVWTFIDSAILVASLDYGQELKQRRDGIVERLYATSMVTRCKSCD 60

Query: 1037 FG--GDVVKVDKEISHXXXXXXXXXDEAIKALQAASPSTPHSVNVNVXXXXXXXXXXXXG 864
            FG   +  +V+KE S           E        SP TP S N +             G
Sbjct: 61   FGERSNGYQVNKEGSPNEGKGGEGGRE--------SPFTPQSDNED------GDLDPYGG 106

Query: 863  LFDDEPKRILEIKEHLEDPDQSEXXXXXXXXXXXXXXITFKALKETDIGRHVNRLRKHSS 684
            LFDDE KR+LEIKE LE+PDQSE              ITF+ALKETDIGRHVN+LRKHSS
Sbjct: 107  LFDDEQKRVLEIKESLEEPDQSEDSLVDLLQSLADMDITFQALKETDIGRHVNKLRKHSS 166

Query: 683  NDVRRLVKHLVRKWKDIVDEWVRLNQPGELASSAMM-DGDSPQQKIPQNGNHQVPDFALS 507
            NDVRRLVK LVRKWK+IVDEWVR+NQPGEL S+A+M DGDSPQQK+PQNG  QVPDFA S
Sbjct: 167  NDVRRLVKQLVRKWKEIVDEWVRVNQPGELESAALMADGDSPQQKLPQNGRQQVPDFAYS 226

Query: 506  PNPHNGSSGSDKNNSXXXXXXXXXXXXXXXXXXXXXXXXXXATTSHSVQRPREQKESRES 327
            PNPHNGS G +KNNS                          +T   +VQR REQK   ES
Sbjct: 227  PNPHNGSFGLEKNNS----EPERKPKPIPPPRKDPPPRPTHSTPPQNVQRQREQK---ES 279

Query: 326  TFDSDRLASARKRLQENYKKEENAKRQRTIQVMDIHEIXXXXXXXXXXXXXKGGGSQGRH 147
             FDS+RLASARKRLQ NYK+ ENAK+QRTIQVMDIHE+             KGGGSQGRH
Sbjct: 280  NFDSERLASARKRLQANYKEAENAKKQRTIQVMDIHEL--PKPKNAFFGKNKGGGSQGRH 337

Query: 146  W 144
            W
Sbjct: 338  W 338


>XP_016724383.1 PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c isoform X2 [Gossypium hirsutum]
            XP_017615588.1 PREDICTED: probable mediator of RNA
            polymerase II transcription subunit 26c isoform X2
            [Gossypium arboreum]
          Length = 336

 Score =  366 bits (939), Expect = e-121
 Identities = 213/361 (59%), Positives = 239/361 (66%), Gaps = 3/361 (0%)
 Frame = -1

Query: 1217 MDLDNFRSVLETAGVDVWTFIDTAILVASLDYATELKQRRDKIVERLYSTCIASRCSNCD 1038
            MDLD+FRSVLETAGVDVWTFIDTAILVASLDY  E KQRRD IVERLY+T + +RC +CD
Sbjct: 1    MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQEFKQRRDGIVERLYATSMVTRCKSCD 60

Query: 1037 FG--GDVVKVDKEISHXXXXXXXXXDEAIKALQAASPSTPHSVNVNVXXXXXXXXXXXXG 864
            FG   +V +V+KE S              K     SP TPHS N +             G
Sbjct: 61   FGERSNVYQVNKEDSPHEG----------KGGGKGSPFTPHSDNED------DDMDPYGG 104

Query: 863  LFDDEPKRILEIKEHLEDPDQSEXXXXXXXXXXXXXXITFKALKETDIGRHVNRLRKHSS 684
            LFDDE KR+LEIKE LE PDQSE              ITF+ALKETDIGRHVN+LRKHSS
Sbjct: 105  LFDDEQKRVLEIKERLELPDQSEDSLVDLLQSLADMDITFQALKETDIGRHVNKLRKHSS 164

Query: 683  NDVRRLVKHLVRKWKDIVDEWVRLNQPGELASSAMM-DGDSPQQKIPQNGNHQVPDFALS 507
            NDVRRLVK LVRKWK+IVDEWVR+NQPGE   + +M DGDSPQQK+PQNG  QVPDFA S
Sbjct: 165  NDVRRLVKQLVRKWKEIVDEWVRVNQPGEPEPAGLMADGDSPQQKLPQNGRQQVPDFAYS 224

Query: 506  PNPHNGSSGSDKNNSXXXXXXXXXXXXXXXXXXXXXXXXXXATTSHSVQRPREQKESRES 327
            PNPHNGS GS+KNNS                          +T   +VQR REQK   ES
Sbjct: 225  PNPHNGSFGSEKNNS----EPERKPKPIPPSRKDPPPRHTHSTPPQNVQRQREQK---ES 277

Query: 326  TFDSDRLASARKRLQENYKKEENAKRQRTIQVMDIHEIXXXXXXXXXXXXXKGGGSQGRH 147
             FDS+RLASARKRLQE+YK+ ENAK+QRT+QVMDIHE+             KGGGSQGRH
Sbjct: 278  NFDSERLASARKRLQESYKEAENAKKQRTVQVMDIHEL--PKPKNAFFAKNKGGGSQGRH 335

Query: 146  W 144
            W
Sbjct: 336  W 336


>XP_016728041.1 PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c isoform X1 [Gossypium hirsutum]
            XP_016728042.1 PREDICTED: probable mediator of RNA
            polymerase II transcription subunit 26c isoform X1
            [Gossypium hirsutum] XP_016728043.1 PREDICTED: probable
            mediator of RNA polymerase II transcription subunit 26c
            isoform X1 [Gossypium hirsutum] XP_016728044.1 PREDICTED:
            probable mediator of RNA polymerase II transcription
            subunit 26c isoform X1 [Gossypium hirsutum]
          Length = 337

 Score =  366 bits (939), Expect = e-121
 Identities = 213/362 (58%), Positives = 239/362 (66%), Gaps = 4/362 (1%)
 Frame = -1

Query: 1217 MDLDNFRSVLETAGVDVWTFIDTAILVASLDYATELKQRRDKIVERLYSTCIASRCSNCD 1038
            MDLD+FRSVLETAGVDVWTFIDTAILVASLDY  E KQRRD IVERLY+T + +RC +CD
Sbjct: 1    MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQEFKQRRDGIVERLYATSMVTRCKSCD 60

Query: 1037 FG--GDVVKVDKEISHXXXXXXXXXDEAIKALQAASPSTPHSVNVNVXXXXXXXXXXXXG 864
            FG   +V +V+KE S              K     SP TPHS N +             G
Sbjct: 61   FGERSNVYQVNKEDSPHEG----------KGGGKGSPFTPHSENED------DDMDPYGG 104

Query: 863  LFDDEPKRILEIKEHLEDPDQSEXXXXXXXXXXXXXXITFKALKETDIGRHVNRLRKHSS 684
            LFDDE KR+LEIKE LE PDQSE              ITF+ALKETDIGRHVN+LRKHSS
Sbjct: 105  LFDDEQKRVLEIKERLELPDQSEDSLVDLLQSLADMDITFQALKETDIGRHVNKLRKHSS 164

Query: 683  NDVRRLVKHLVRKWKDIVDEWVRLNQPGELASSAMM--DGDSPQQKIPQNGNHQVPDFAL 510
            NDVRRLVK LVRKWK+IVDEWVR+NQPGE   + +M  DGDSPQQK+PQNG  QVPDFA 
Sbjct: 165  NDVRRLVKQLVRKWKEIVDEWVRVNQPGEPEPAGLMAADGDSPQQKLPQNGRQQVPDFAY 224

Query: 509  SPNPHNGSSGSDKNNSXXXXXXXXXXXXXXXXXXXXXXXXXXATTSHSVQRPREQKESRE 330
            SPNPHNGS GS+KNNS                          +T   +VQR REQK   E
Sbjct: 225  SPNPHNGSFGSEKNNS----EPERKPKPIPPSRKDPPPRHTHSTPPQNVQRQREQK---E 277

Query: 329  STFDSDRLASARKRLQENYKKEENAKRQRTIQVMDIHEIXXXXXXXXXXXXXKGGGSQGR 150
            S FDS+RLASARKRLQE+YK+ ENAK+QRT+QVMDIHE+             KGGGSQGR
Sbjct: 278  SNFDSERLASARKRLQESYKEAENAKKQRTVQVMDIHEL--PKPKNAFFAKNKGGGSQGR 335

Query: 149  HW 144
            HW
Sbjct: 336  HW 337


>XP_012458765.1 PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c isoform X2 [Gossypium raimondii] KJB74979.1
            hypothetical protein B456_012G017100 [Gossypium
            raimondii]
          Length = 336

 Score =  365 bits (938), Expect = e-121
 Identities = 213/361 (59%), Positives = 239/361 (66%), Gaps = 3/361 (0%)
 Frame = -1

Query: 1217 MDLDNFRSVLETAGVDVWTFIDTAILVASLDYATELKQRRDKIVERLYSTCIASRCSNCD 1038
            MDLD+FRSVLETAGVDVWTFIDTAILVASLDY  E KQRRD IVERLY+T + +RC +CD
Sbjct: 1    MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQEFKQRRDGIVERLYATSMVTRCKSCD 60

Query: 1037 FG--GDVVKVDKEISHXXXXXXXXXDEAIKALQAASPSTPHSVNVNVXXXXXXXXXXXXG 864
            FG   +V +V+KE S              K     SP TPHS N +             G
Sbjct: 61   FGERSNVYQVNKEDSPHEG----------KEGGKGSPFTPHSDNED------DDMDPYGG 104

Query: 863  LFDDEPKRILEIKEHLEDPDQSEXXXXXXXXXXXXXXITFKALKETDIGRHVNRLRKHSS 684
            LFDDE KR+LEIKE LE PDQSE              ITF+ALKETDIGRHVN+LRKHSS
Sbjct: 105  LFDDEQKRVLEIKERLELPDQSEDSLVDLLQSLADMDITFQALKETDIGRHVNKLRKHSS 164

Query: 683  NDVRRLVKHLVRKWKDIVDEWVRLNQPGELASSAMM-DGDSPQQKIPQNGNHQVPDFALS 507
            NDVRRLVK LVRKWK+IVDEWVR+NQPGE   + +M DGDSPQQK+PQNG  QVPDFA S
Sbjct: 165  NDVRRLVKQLVRKWKEIVDEWVRVNQPGEPEPAGLMADGDSPQQKLPQNGRQQVPDFAYS 224

Query: 506  PNPHNGSSGSDKNNSXXXXXXXXXXXXXXXXXXXXXXXXXXATTSHSVQRPREQKESRES 327
            PNPHNGS GS+KNNS                          +T   +VQR REQK   ES
Sbjct: 225  PNPHNGSFGSEKNNS----EPERKPKPIPPCRKDPPSRHTHSTPPQNVQRQREQK---ES 277

Query: 326  TFDSDRLASARKRLQENYKKEENAKRQRTIQVMDIHEIXXXXXXXXXXXXXKGGGSQGRH 147
             FDS+RLASARKRLQE+YK+ ENAK+QRT+QVMDIHE+             KGGGSQGRH
Sbjct: 278  NFDSERLASARKRLQESYKEAENAKKQRTVQVMDIHEL--PKPKNAFFAKNKGGGSQGRH 335

Query: 146  W 144
            W
Sbjct: 336  W 336


>XP_016724382.1 PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c isoform X1 [Gossypium hirsutum]
            XP_017615585.1 PREDICTED: probable mediator of RNA
            polymerase II transcription subunit 26c isoform X1
            [Gossypium arboreum] XP_017615586.1 PREDICTED: probable
            mediator of RNA polymerase II transcription subunit 26c
            isoform X1 [Gossypium arboreum] XP_017615587.1 PREDICTED:
            probable mediator of RNA polymerase II transcription
            subunit 26c isoform X1 [Gossypium arboreum]
          Length = 337

 Score =  365 bits (938), Expect = e-121
 Identities = 213/362 (58%), Positives = 239/362 (66%), Gaps = 4/362 (1%)
 Frame = -1

Query: 1217 MDLDNFRSVLETAGVDVWTFIDTAILVASLDYATELKQRRDKIVERLYSTCIASRCSNCD 1038
            MDLD+FRSVLETAGVDVWTFIDTAILVASLDY  E KQRRD IVERLY+T + +RC +CD
Sbjct: 1    MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQEFKQRRDGIVERLYATSMVTRCKSCD 60

Query: 1037 FG--GDVVKVDKEISHXXXXXXXXXDEAIKALQAASPSTPHSVNVNVXXXXXXXXXXXXG 864
            FG   +V +V+KE S              K     SP TPHS N +             G
Sbjct: 61   FGERSNVYQVNKEDSPHEG----------KGGGKGSPFTPHSDNED------DDMDPYGG 104

Query: 863  LFDDEPKRILEIKEHLEDPDQSEXXXXXXXXXXXXXXITFKALKETDIGRHVNRLRKHSS 684
            LFDDE KR+LEIKE LE PDQSE              ITF+ALKETDIGRHVN+LRKHSS
Sbjct: 105  LFDDEQKRVLEIKERLELPDQSEDSLVDLLQSLADMDITFQALKETDIGRHVNKLRKHSS 164

Query: 683  NDVRRLVKHLVRKWKDIVDEWVRLNQPGELASSAMM--DGDSPQQKIPQNGNHQVPDFAL 510
            NDVRRLVK LVRKWK+IVDEWVR+NQPGE   + +M  DGDSPQQK+PQNG  QVPDFA 
Sbjct: 165  NDVRRLVKQLVRKWKEIVDEWVRVNQPGEPEPAGLMAADGDSPQQKLPQNGRQQVPDFAY 224

Query: 509  SPNPHNGSSGSDKNNSXXXXXXXXXXXXXXXXXXXXXXXXXXATTSHSVQRPREQKESRE 330
            SPNPHNGS GS+KNNS                          +T   +VQR REQK   E
Sbjct: 225  SPNPHNGSFGSEKNNS----EPERKPKPIPPSRKDPPPRHTHSTPPQNVQRQREQK---E 277

Query: 329  STFDSDRLASARKRLQENYKKEENAKRQRTIQVMDIHEIXXXXXXXXXXXXXKGGGSQGR 150
            S FDS+RLASARKRLQE+YK+ ENAK+QRT+QVMDIHE+             KGGGSQGR
Sbjct: 278  SNFDSERLASARKRLQESYKEAENAKKQRTVQVMDIHEL--PKPKNAFFAKNKGGGSQGR 335

Query: 149  HW 144
            HW
Sbjct: 336  HW 337


>XP_012458764.1 PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c isoform X1 [Gossypium raimondii]
          Length = 337

 Score =  365 bits (937), Expect = e-121
 Identities = 213/362 (58%), Positives = 239/362 (66%), Gaps = 4/362 (1%)
 Frame = -1

Query: 1217 MDLDNFRSVLETAGVDVWTFIDTAILVASLDYATELKQRRDKIVERLYSTCIASRCSNCD 1038
            MDLD+FRSVLETAGVDVWTFIDTAILVASLDY  E KQRRD IVERLY+T + +RC +CD
Sbjct: 1    MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQEFKQRRDGIVERLYATSMVTRCKSCD 60

Query: 1037 FG--GDVVKVDKEISHXXXXXXXXXDEAIKALQAASPSTPHSVNVNVXXXXXXXXXXXXG 864
            FG   +V +V+KE S              K     SP TPHS N +             G
Sbjct: 61   FGERSNVYQVNKEDSPHEG----------KEGGKGSPFTPHSDNED------DDMDPYGG 104

Query: 863  LFDDEPKRILEIKEHLEDPDQSEXXXXXXXXXXXXXXITFKALKETDIGRHVNRLRKHSS 684
            LFDDE KR+LEIKE LE PDQSE              ITF+ALKETDIGRHVN+LRKHSS
Sbjct: 105  LFDDEQKRVLEIKERLELPDQSEDSLVDLLQSLADMDITFQALKETDIGRHVNKLRKHSS 164

Query: 683  NDVRRLVKHLVRKWKDIVDEWVRLNQPGELASSAMM--DGDSPQQKIPQNGNHQVPDFAL 510
            NDVRRLVK LVRKWK+IVDEWVR+NQPGE   + +M  DGDSPQQK+PQNG  QVPDFA 
Sbjct: 165  NDVRRLVKQLVRKWKEIVDEWVRVNQPGEPEPAGLMAADGDSPQQKLPQNGRQQVPDFAY 224

Query: 509  SPNPHNGSSGSDKNNSXXXXXXXXXXXXXXXXXXXXXXXXXXATTSHSVQRPREQKESRE 330
            SPNPHNGS GS+KNNS                          +T   +VQR REQK   E
Sbjct: 225  SPNPHNGSFGSEKNNS----EPERKPKPIPPCRKDPPSRHTHSTPPQNVQRQREQK---E 277

Query: 329  STFDSDRLASARKRLQENYKKEENAKRQRTIQVMDIHEIXXXXXXXXXXXXXKGGGSQGR 150
            S FDS+RLASARKRLQE+YK+ ENAK+QRT+QVMDIHE+             KGGGSQGR
Sbjct: 278  SNFDSERLASARKRLQESYKEAENAKKQRTVQVMDIHEL--PKPKNAFFAKNKGGGSQGR 335

Query: 149  HW 144
            HW
Sbjct: 336  HW 337


>XP_016754190.1 PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c [Gossypium hirsutum]
          Length = 335

 Score =  365 bits (936), Expect = e-121
 Identities = 209/360 (58%), Positives = 238/360 (66%), Gaps = 2/360 (0%)
 Frame = -1

Query: 1217 MDLDNFRSVLETAGVDVWTFIDTAILVASLDYATELKQRRDKIVERLYSTCIASRCSNCD 1038
            MDLD+FRSVLETAGVDVWTFIDTAILVASLDY  ELKQRRD IVERLY+T + ++C +CD
Sbjct: 1    MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQELKQRRDGIVERLYATSMVTKCKSCD 60

Query: 1037 FG--GDVVKVDKEISHXXXXXXXXXDEAIKALQAASPSTPHSVNVNVXXXXXXXXXXXXG 864
            FG   +  +++ E +           E  +     SP +P S N N             G
Sbjct: 61   FGEGSNGYQLNNESN---------PHEGGEEGVTGSPFSPQSDNEN------DDFDPYGG 105

Query: 863  LFDDEPKRILEIKEHLEDPDQSEXXXXXXXXXXXXXXITFKALKETDIGRHVNRLRKHSS 684
            LFDDE KR+LEIKE LE PDQSE              ITF+ALKETDIGRHVN+LRKHSS
Sbjct: 106  LFDDEQKRVLEIKERLELPDQSEDTLVDLLQSLADMDITFQALKETDIGRHVNKLRKHSS 165

Query: 683  NDVRRLVKHLVRKWKDIVDEWVRLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFALSP 504
            NDVRRLVKHLVRKWKDIVDEWVR+NQPGE   +A+MDGDSPQQK PQNG  QVPDFA SP
Sbjct: 166  NDVRRLVKHLVRKWKDIVDEWVRVNQPGEHEPAALMDGDSPQQKQPQNGRQQVPDFAYSP 225

Query: 503  NPHNGSSGSDKNNSXXXXXXXXXXXXXXXXXXXXXXXXXXATTSHSVQRPREQKESREST 324
            NPHNG SGS+KNNS                           T   +VQR REQK   E+ 
Sbjct: 226  NPHNGGSGSEKNNS-----EPERKPKLIPPRKDPPSRPTHLTPPQNVQRQREQK---ETN 277

Query: 323  FDSDRLASARKRLQENYKKEENAKRQRTIQVMDIHEIXXXXXXXXXXXXXKGGGSQGRHW 144
            FD++RLASARKRLQE+YK+ ENAK+QRT+QVMDIHE+             KGGGSQGRHW
Sbjct: 278  FDAERLASARKRLQESYKEAENAKKQRTVQVMDIHEL--PKPKNAFFGRNKGGGSQGRHW 335


>XP_012451443.1 PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c [Gossypium raimondii] KJB67898.1 hypothetical
            protein B456_010G216800 [Gossypium raimondii]
          Length = 335

 Score =  365 bits (936), Expect = e-121
 Identities = 209/360 (58%), Positives = 238/360 (66%), Gaps = 2/360 (0%)
 Frame = -1

Query: 1217 MDLDNFRSVLETAGVDVWTFIDTAILVASLDYATELKQRRDKIVERLYSTCIASRCSNCD 1038
            MDLD+FRSVLETAGVDVWTFIDTAILVASLDY  ELKQRRD IVERLY+T + ++C +CD
Sbjct: 1    MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQELKQRRDGIVERLYATSMVTKCKSCD 60

Query: 1037 FG--GDVVKVDKEISHXXXXXXXXXDEAIKALQAASPSTPHSVNVNVXXXXXXXXXXXXG 864
            FG   +  +++ E +           E  +     SP +P S N N             G
Sbjct: 61   FGEGSNGYQLNNESN---------PHEGGEEGVTGSPFSPQSDNEN------DDFDPYGG 105

Query: 863  LFDDEPKRILEIKEHLEDPDQSEXXXXXXXXXXXXXXITFKALKETDIGRHVNRLRKHSS 684
            LFDDE KR+LEIKE LE PDQSE              ITF+ALKETDIGRHVN+LRKHSS
Sbjct: 106  LFDDEQKRVLEIKERLELPDQSEDTLVDLLQSLADMDITFQALKETDIGRHVNKLRKHSS 165

Query: 683  NDVRRLVKHLVRKWKDIVDEWVRLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFALSP 504
            NDVRRLVKHLVRKWKDIVDEWVR+NQPGE   +A+MDGDSPQQK PQNG  QVPDFA SP
Sbjct: 166  NDVRRLVKHLVRKWKDIVDEWVRVNQPGEHEPAALMDGDSPQQKPPQNGRQQVPDFAYSP 225

Query: 503  NPHNGSSGSDKNNSXXXXXXXXXXXXXXXXXXXXXXXXXXATTSHSVQRPREQKESREST 324
            NPHNG SGS+KNNS                           T   +VQR REQK   E+ 
Sbjct: 226  NPHNGGSGSEKNNS-----EPERKPKPIPPRKDPPSRPTHLTPPQNVQRQREQK---ETN 277

Query: 323  FDSDRLASARKRLQENYKKEENAKRQRTIQVMDIHEIXXXXXXXXXXXXXKGGGSQGRHW 144
            FD++RLASARKRLQE+YK+ ENAK+QRT+QVMDIHE+             KGGGSQGRHW
Sbjct: 278  FDAERLASARKRLQESYKEAENAKKQRTVQVMDIHEL--PKPKNAFFGRNKGGGSQGRHW 335