BLASTX nr result
ID: Phellodendron21_contig00019685
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00019685
(405 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006465349.1 PREDICTED: DNA-directed RNA polymerase III subuni... 165 8e-49
XP_006427248.1 hypothetical protein CICLE_v10026399mg [Citrus cl... 165 8e-49
KDO80021.1 hypothetical protein CISIN_1g0254932mg, partial [Citr... 162 1e-47
XP_006475959.1 PREDICTED: DNA-directed RNA polymerase III subuni... 162 1e-47
XP_006475958.1 PREDICTED: DNA-directed RNA polymerase III subuni... 162 2e-47
XP_017978027.1 PREDICTED: DNA-directed RNA polymerase III subuni... 142 7e-40
EOY25790.1 DNA-directed RNA polymerase III subunit rpc6, putativ... 140 3e-39
OAY52825.1 hypothetical protein MANES_04G114300 [Manihot esculen... 139 1e-38
XP_011048175.1 PREDICTED: DNA-directed RNA polymerase III subuni... 139 2e-38
XP_011003009.1 PREDICTED: DNA-directed RNA polymerase III subuni... 138 2e-38
XP_011003010.1 PREDICTED: DNA-directed RNA polymerase III subuni... 138 4e-38
XP_008238459.1 PREDICTED: DNA-directed RNA polymerase III subuni... 137 6e-38
XP_018829908.1 PREDICTED: DNA-directed RNA polymerase III subuni... 137 7e-38
XP_008218752.1 PREDICTED: DNA-directed RNA polymerase III subuni... 136 1e-37
XP_007208807.1 hypothetical protein PRUPE_ppa024742mg [Prunus pe... 136 1e-37
XP_008439941.1 PREDICTED: DNA-directed RNA polymerase III subuni... 136 1e-37
XP_002297621.2 hypothetical protein POPTR_0001s04090g [Populus t... 136 5e-37
XP_010097238.1 DNA-directed RNA polymerase III subunit RPC6 [Mor... 135 5e-37
APR64150.1 hypothetical protein [Populus tomentosa] 134 8e-37
XP_002324707.1 hypothetical protein POPTR_0018s04220g [Populus t... 134 8e-37
>XP_006465349.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Citrus sinensis]
Length = 233
Score = 165 bits (417), Expect = 8e-49
Identities = 75/82 (91%), Positives = 77/82 (93%)
Frame = +3
Query: 3 VRALVLDNQITEVKSNGTGEFTNIPVGKVCYKNTSKGGSGGEPKTGSLASIPCGVCPQIN 182
VRALVLDNQI EVKSNG+GEFTNIPVGKVCYKN SKGG GGEPKTGSLASIPCGVCPQIN
Sbjct: 152 VRALVLDNQIMEVKSNGSGEFTNIPVGKVCYKNVSKGGGGGEPKTGSLASIPCGVCPQIN 211
Query: 183 ICTPDGIISPKACVYYTKWLDF 248
ICTPDG+ISPK CVYYT WLDF
Sbjct: 212 ICTPDGVISPKTCVYYTTWLDF 233
>XP_006427248.1 hypothetical protein CICLE_v10026399mg [Citrus clementina]
ESR40488.1 hypothetical protein CICLE_v10026399mg
[Citrus clementina] KDO45213.1 hypothetical protein
CISIN_1g026766mg [Citrus sinensis] KDO45214.1
hypothetical protein CISIN_1g026766mg [Citrus sinensis]
Length = 233
Score = 165 bits (417), Expect = 8e-49
Identities = 75/82 (91%), Positives = 77/82 (93%)
Frame = +3
Query: 3 VRALVLDNQITEVKSNGTGEFTNIPVGKVCYKNTSKGGSGGEPKTGSLASIPCGVCPQIN 182
VRALVLDNQI EVKSNG+GEFTNIPVGKVCYKN SKGG GGEPKTGSLASIPCGVCPQIN
Sbjct: 152 VRALVLDNQIMEVKSNGSGEFTNIPVGKVCYKNVSKGGGGGEPKTGSLASIPCGVCPQIN 211
Query: 183 ICTPDGIISPKACVYYTKWLDF 248
IC PDG+ISPK CVYYTKWLDF
Sbjct: 212 ICKPDGVISPKTCVYYTKWLDF 233
>KDO80021.1 hypothetical protein CISIN_1g0254932mg, partial [Citrus sinensis]
Length = 234
Score = 162 bits (409), Expect = 1e-47
Identities = 72/82 (87%), Positives = 76/82 (92%)
Frame = +3
Query: 3 VRALVLDNQITEVKSNGTGEFTNIPVGKVCYKNTSKGGSGGEPKTGSLASIPCGVCPQIN 182
VRA+VLDNQI EVKSNG+GEFTNIPVGKVCYKN SKGG GGEPKTGS AS+PCGVCPQIN
Sbjct: 153 VRAVVLDNQIMEVKSNGSGEFTNIPVGKVCYKNVSKGGGGGEPKTGSSASVPCGVCPQIN 212
Query: 183 ICTPDGIISPKACVYYTKWLDF 248
CTPDG+ISPK CVYYTKWLDF
Sbjct: 213 FCTPDGVISPKTCVYYTKWLDF 234
>XP_006475959.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X2 [Citrus sinensis]
Length = 234
Score = 162 bits (409), Expect = 1e-47
Identities = 72/82 (87%), Positives = 76/82 (92%)
Frame = +3
Query: 3 VRALVLDNQITEVKSNGTGEFTNIPVGKVCYKNTSKGGSGGEPKTGSLASIPCGVCPQIN 182
VRA+VLDNQI EVKSNG+GEFTNIPVGKVCYKN SKGG GGEPKTGS AS+PCGVCPQIN
Sbjct: 153 VRAVVLDNQIMEVKSNGSGEFTNIPVGKVCYKNVSKGGGGGEPKTGSSASVPCGVCPQIN 212
Query: 183 ICTPDGIISPKACVYYTKWLDF 248
CTPDG+ISPK CVYYTKWLDF
Sbjct: 213 FCTPDGVISPKTCVYYTKWLDF 234
>XP_006475958.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Citrus sinensis]
Length = 252
Score = 162 bits (409), Expect = 2e-47
Identities = 72/82 (87%), Positives = 76/82 (92%)
Frame = +3
Query: 3 VRALVLDNQITEVKSNGTGEFTNIPVGKVCYKNTSKGGSGGEPKTGSLASIPCGVCPQIN 182
VRA+VLDNQI EVKSNG+GEFTNIPVGKVCYKN SKGG GGEPKTGS AS+PCGVCPQIN
Sbjct: 171 VRAVVLDNQIMEVKSNGSGEFTNIPVGKVCYKNVSKGGGGGEPKTGSSASVPCGVCPQIN 230
Query: 183 ICTPDGIISPKACVYYTKWLDF 248
CTPDG+ISPK CVYYTKWLDF
Sbjct: 231 FCTPDGVISPKTCVYYTKWLDF 252
>XP_017978027.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Theobroma
cacao] XP_007023169.2 PREDICTED: DNA-directed RNA
polymerase III subunit RPC6 [Theobroma cacao]
Length = 237
Score = 142 bits (358), Expect = 7e-40
Identities = 64/82 (78%), Positives = 72/82 (87%)
Frame = +3
Query: 3 VRALVLDNQITEVKSNGTGEFTNIPVGKVCYKNTSKGGSGGEPKTGSLASIPCGVCPQIN 182
V+ALVLDN++ EVKS+GTGEF +IPVGKVCYK K G GGEPK G++ASIPCGVCPQI+
Sbjct: 156 VKALVLDNEVMEVKSSGTGEFASIPVGKVCYKCIGKRGYGGEPKVGTMASIPCGVCPQIS 215
Query: 183 ICTPDGIISPKACVYYTKWLDF 248
CTPDGIISPKACVYY KWLDF
Sbjct: 216 HCTPDGIISPKACVYYKKWLDF 237
>EOY25790.1 DNA-directed RNA polymerase III subunit rpc6, putative isoform 1
[Theobroma cacao] EOY25791.1 DNA-directed RNA polymerase
III subunit rpc6, putative isoform 1 [Theobroma cacao]
Length = 237
Score = 140 bits (354), Expect = 3e-39
Identities = 63/82 (76%), Positives = 71/82 (86%)
Frame = +3
Query: 3 VRALVLDNQITEVKSNGTGEFTNIPVGKVCYKNTSKGGSGGEPKTGSLASIPCGVCPQIN 182
V+ALVLDN++ EVKS+GTGEF +IPVGKVCYK K G GGEPK G++ASIPCGVCPQI+
Sbjct: 156 VKALVLDNEVMEVKSSGTGEFASIPVGKVCYKCIGKRGYGGEPKVGTMASIPCGVCPQIS 215
Query: 183 ICTPDGIISPKACVYYTKWLDF 248
CTPDGIISPK CVYY KWLDF
Sbjct: 216 HCTPDGIISPKTCVYYKKWLDF 237
>OAY52825.1 hypothetical protein MANES_04G114300 [Manihot esculenta] OAY52826.1
hypothetical protein MANES_04G114300 [Manihot esculenta]
Length = 236
Score = 139 bits (350), Expect = 1e-38
Identities = 61/82 (74%), Positives = 71/82 (86%)
Frame = +3
Query: 3 VRALVLDNQITEVKSNGTGEFTNIPVGKVCYKNTSKGGSGGEPKTGSLASIPCGVCPQIN 182
V+ALVLDN+I E+KSNG GEF +IPVGK+CYK SKG GGEPK G++ASIPCGVCP+I+
Sbjct: 155 VKALVLDNEIIELKSNGMGEFASIPVGKICYKCISKGSGGGEPKIGAMASIPCGVCPRIH 214
Query: 183 ICTPDGIISPKACVYYTKWLDF 248
CTPDGIISP+ CVYY KWLDF
Sbjct: 215 QCTPDGIISPQTCVYYNKWLDF 236
>XP_011048175.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Populus euphratica] XP_011048177.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like
[Populus euphratica] XP_011048178.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like
[Populus euphratica]
Length = 239
Score = 139 bits (349), Expect = 2e-38
Identities = 62/82 (75%), Positives = 69/82 (84%)
Frame = +3
Query: 3 VRALVLDNQITEVKSNGTGEFTNIPVGKVCYKNTSKGGSGGEPKTGSLASIPCGVCPQIN 182
+R L+LDN I EVKSNG GEF +IP G+VCYK SKGG GGEPK G+LASIPCGVCP+I+
Sbjct: 158 LRTLILDNAIMEVKSNGMGEFASIPFGEVCYKYVSKGGLGGEPKAGALASIPCGVCPRIS 217
Query: 183 ICTPDGIISPKACVYYTKWLDF 248
CTPDGIISPK CVYY KWLDF
Sbjct: 218 QCTPDGIISPKTCVYYQKWLDF 239
>XP_011003009.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Populus euphratica]
Length = 239
Score = 138 bits (348), Expect = 2e-38
Identities = 62/82 (75%), Positives = 69/82 (84%)
Frame = +3
Query: 3 VRALVLDNQITEVKSNGTGEFTNIPVGKVCYKNTSKGGSGGEPKTGSLASIPCGVCPQIN 182
+R L+LDN I EVKSNG GEF +IP G+VCYK SKGG GGEPK G+LASIPCGVCP+I+
Sbjct: 158 LRTLILDNVIMEVKSNGMGEFASIPFGEVCYKYVSKGGLGGEPKAGALASIPCGVCPRIS 217
Query: 183 ICTPDGIISPKACVYYTKWLDF 248
CTPDGIISPK CVYY KWLDF
Sbjct: 218 QCTPDGIISPKTCVYYQKWLDF 239
>XP_011003010.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X2 [Populus euphratica]
Length = 258
Score = 138 bits (348), Expect = 4e-38
Identities = 62/82 (75%), Positives = 69/82 (84%)
Frame = +3
Query: 3 VRALVLDNQITEVKSNGTGEFTNIPVGKVCYKNTSKGGSGGEPKTGSLASIPCGVCPQIN 182
+R L+LDN I EVKSNG GEF +IP G+VCYK SKGG GGEPK G+LASIPCGVCP+I+
Sbjct: 177 LRTLILDNVIMEVKSNGMGEFASIPFGEVCYKYVSKGGLGGEPKAGALASIPCGVCPRIS 236
Query: 183 ICTPDGIISPKACVYYTKWLDF 248
CTPDGIISPK CVYY KWLDF
Sbjct: 237 QCTPDGIISPKTCVYYQKWLDF 258
>XP_008238459.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Prunus mume]
Length = 236
Score = 137 bits (345), Expect = 6e-38
Identities = 59/82 (71%), Positives = 72/82 (87%)
Frame = +3
Query: 3 VRALVLDNQITEVKSNGTGEFTNIPVGKVCYKNTSKGGSGGEPKTGSLASIPCGVCPQIN 182
+R LVLD ++TEVKSNG GEF + PVGK+CYK+TSKGG+ EPK G++ASIPCGVCP+I+
Sbjct: 155 LRVLVLDKRVTEVKSNGMGEFGSFPVGKICYKSTSKGGTKREPKAGAMASIPCGVCPRIS 214
Query: 183 ICTPDGIISPKACVYYTKWLDF 248
CTPDGIISP+ CVY+TKWLDF
Sbjct: 215 QCTPDGIISPRTCVYFTKWLDF 236
>XP_018829908.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Juglans regia] XP_018829909.1 PREDICTED: DNA-directed
RNA polymerase III subunit rpc6-like [Juglans regia]
XP_018829910.1 PREDICTED: DNA-directed RNA polymerase
III subunit rpc6-like [Juglans regia]
Length = 239
Score = 137 bits (345), Expect = 7e-38
Identities = 60/82 (73%), Positives = 72/82 (87%)
Frame = +3
Query: 3 VRALVLDNQITEVKSNGTGEFTNIPVGKVCYKNTSKGGSGGEPKTGSLASIPCGVCPQIN 182
V LVLDN+I EVKSNG GEF +IPVG+VCY T+KGG+ GEPK G++ASIPCGVCP+I+
Sbjct: 158 VNVLVLDNEIMEVKSNGIGEFGSIPVGRVCYTCTNKGGNKGEPKIGAMASIPCGVCPRIS 217
Query: 183 ICTPDGIISPKACVYYTKWLDF 248
+CTPDGIISPK CVY++KWLDF
Sbjct: 218 LCTPDGIISPKTCVYFSKWLDF 239
>XP_008218752.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Prunus mume]
Length = 236
Score = 136 bits (343), Expect = 1e-37
Identities = 60/82 (73%), Positives = 71/82 (86%)
Frame = +3
Query: 3 VRALVLDNQITEVKSNGTGEFTNIPVGKVCYKNTSKGGSGGEPKTGSLASIPCGVCPQIN 182
+R LVLD +ITEVKS G GEF + PVGKVCYK+TSKGG+ EPK G++ASIPCGVCP+I+
Sbjct: 155 LRVLVLDKRITEVKSTGMGEFASFPVGKVCYKSTSKGGTKREPKVGAMASIPCGVCPRIS 214
Query: 183 ICTPDGIISPKACVYYTKWLDF 248
CTPDGIISP+ CVY+TKWLDF
Sbjct: 215 QCTPDGIISPRTCVYFTKWLDF 236
>XP_007208807.1 hypothetical protein PRUPE_ppa024742mg [Prunus persica] ONI06549.1
hypothetical protein PRUPE_5G067300 [Prunus persica]
Length = 236
Score = 136 bits (343), Expect = 1e-37
Identities = 60/82 (73%), Positives = 71/82 (86%)
Frame = +3
Query: 3 VRALVLDNQITEVKSNGTGEFTNIPVGKVCYKNTSKGGSGGEPKTGSLASIPCGVCPQIN 182
+R LVLD ++TEVKS G GEF + PVGKVCYK+TSKGGS EPK G++ASIPCGVCP+I+
Sbjct: 155 LRVLVLDKRVTEVKSTGMGEFGSFPVGKVCYKSTSKGGSKREPKVGAMASIPCGVCPRIS 214
Query: 183 ICTPDGIISPKACVYYTKWLDF 248
CTPDGIISP+ CVY+TKWLDF
Sbjct: 215 QCTPDGIISPRTCVYFTKWLDF 236
>XP_008439941.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Cucumis melo]
Length = 242
Score = 136 bits (343), Expect = 1e-37
Identities = 61/82 (74%), Positives = 70/82 (85%)
Frame = +3
Query: 3 VRALVLDNQITEVKSNGTGEFTNIPVGKVCYKNTSKGGSGGEPKTGSLASIPCGVCPQIN 182
V ALVLDNQ+TEVKS+G GEF IP+GK+CYK S+GG GEPKTG++ASIPCGVCP+I
Sbjct: 161 VNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLKGEPKTGAMASIPCGVCPRIT 220
Query: 183 ICTPDGIISPKACVYYTKWLDF 248
CTP+GIISP CVYYTKWLDF
Sbjct: 221 HCTPNGIISPATCVYYTKWLDF 242
>XP_002297621.2 hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
EEE82426.2 hypothetical protein POPTR_0001s04090g
[Populus trichocarpa]
Length = 291
Score = 136 bits (343), Expect = 5e-37
Identities = 61/82 (74%), Positives = 68/82 (82%)
Frame = +3
Query: 3 VRALVLDNQITEVKSNGTGEFTNIPVGKVCYKNTSKGGSGGEPKTGSLASIPCGVCPQIN 182
+R L+LDN I EVKSNG GEF +IP GKVCY+ SKG GGEPK G+LASIPCGVCP+I+
Sbjct: 210 LRTLILDNAIMEVKSNGMGEFASIPFGKVCYRYISKGALGGEPKAGALASIPCGVCPRIS 269
Query: 183 ICTPDGIISPKACVYYTKWLDF 248
CTPDGIISPK CVYY KWLDF
Sbjct: 270 HCTPDGIISPKTCVYYQKWLDF 291
>XP_010097238.1 DNA-directed RNA polymerase III subunit RPC6 [Morus notabilis]
EXB67305.1 DNA-directed RNA polymerase III subunit RPC6
[Morus notabilis]
Length = 238
Score = 135 bits (339), Expect = 5e-37
Identities = 61/82 (74%), Positives = 73/82 (89%)
Frame = +3
Query: 3 VRALVLDNQITEVKSNGTGEFTNIPVGKVCYKNTSKGGSGGEPKTGSLASIPCGVCPQIN 182
VRALVLDN++ EVKSNG GEF +IPVGKVCYK+TSKG S G+PK G+++SIPCGVCP+I+
Sbjct: 158 VRALVLDNEVVEVKSNGMGEFDSIPVGKVCYKSTSKG-SRGDPKIGAMSSIPCGVCPRIS 216
Query: 183 ICTPDGIISPKACVYYTKWLDF 248
CTPDGIISPK C YY++WLDF
Sbjct: 217 DCTPDGIISPKTCKYYSQWLDF 238
>APR64150.1 hypothetical protein [Populus tomentosa]
Length = 239
Score = 134 bits (338), Expect = 8e-37
Identities = 61/82 (74%), Positives = 68/82 (82%)
Frame = +3
Query: 3 VRALVLDNQITEVKSNGTGEFTNIPVGKVCYKNTSKGGSGGEPKTGSLASIPCGVCPQIN 182
+R L+LDN I EVKSNG GEF +IP G+VCYK SK G GGEPK G+LASIPCGVCP+I+
Sbjct: 158 LRTLILDNVIMEVKSNGMGEFASIPFGEVCYKYISKVGLGGEPKAGALASIPCGVCPRIS 217
Query: 183 ICTPDGIISPKACVYYTKWLDF 248
CTPDGIISPK CVYY KWLDF
Sbjct: 218 QCTPDGIISPKTCVYYQKWLDF 239
>XP_002324707.1 hypothetical protein POPTR_0018s04220g [Populus trichocarpa]
EEF03272.1 hypothetical protein POPTR_0018s04220g
[Populus trichocarpa]
Length = 239
Score = 134 bits (338), Expect = 8e-37
Identities = 61/82 (74%), Positives = 68/82 (82%)
Frame = +3
Query: 3 VRALVLDNQITEVKSNGTGEFTNIPVGKVCYKNTSKGGSGGEPKTGSLASIPCGVCPQIN 182
+R L+LDN I EVKSNG GEF +IP G+VCYK SK G GGEPK G+LASIPCGVCP+I+
Sbjct: 158 LRTLILDNVIMEVKSNGMGEFASIPFGEVCYKYISKVGLGGEPKAGALASIPCGVCPRIS 217
Query: 183 ICTPDGIISPKACVYYTKWLDF 248
CTPDGIISPK CVYY KWLDF
Sbjct: 218 QCTPDGIISPKTCVYYQKWLDF 239