BLASTX nr result

ID: Phellodendron21_contig00019074 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00019074
         (355 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006452480.1 hypothetical protein CICLE_v10007398mg [Citrus cl...   117   4e-28
XP_006452479.1 hypothetical protein CICLE_v10007398mg [Citrus cl...   117   4e-28
KDO62159.1 hypothetical protein CISIN_1g0022601mg, partial [Citr...   116   4e-28
XP_006474977.1 PREDICTED: DNA topoisomerase 1-like isoform X1 [C...   116   5e-28
XP_002529020.1 PREDICTED: DNA topoisomerase 1 [Ricinus communis]...    53   1e-05
XP_017980434.1 PREDICTED: DNA topoisomerase 1 [Theobroma cacao] ...    53   1e-05

>XP_006452480.1 hypothetical protein CICLE_v10007398mg [Citrus clementina]
           ESR65720.1 hypothetical protein CICLE_v10007398mg
           [Citrus clementina]
          Length = 824

 Score =  117 bits (292), Expect = 4e-28
 Identities = 68/117 (58%), Positives = 75/117 (64%)
 Frame = +3

Query: 3   KSPPPSQKASTSSSKALPVXXXXXXXXXXXXXXXXXXXXXLVANSKESSPLEDRLKQSPK 182
           KSPPPSQKA+TSS+KA P+                      VANSKESSPL+DRLKQ P+
Sbjct: 72  KSPPPSQKATTSSAKASPLKSPMRSPVKSPVRSPVKSP---VANSKESSPLDDRLKQLPQ 128

Query: 183 QNALAAVKEEEIKCGNGLXXXXXXXXXXXPLSVRLKGNTNNANLGIGASKADAAISK 353
            NALA VK+EEIK GNGL           PLS RLKGNT N N GIGASKADAAIS+
Sbjct: 129 HNALAVVKKEEIKDGNGLKSDDNDSEDDKPLSARLKGNTKNVNQGIGASKADAAISE 185


>XP_006452479.1 hypothetical protein CICLE_v10007398mg [Citrus clementina]
           XP_006452481.1 hypothetical protein CICLE_v10007398mg
           [Citrus clementina] ESR65719.1 hypothetical protein
           CICLE_v10007398mg [Citrus clementina] ESR65721.1
           hypothetical protein CICLE_v10007398mg [Citrus
           clementina]
          Length = 902

 Score =  117 bits (292), Expect = 4e-28
 Identities = 68/117 (58%), Positives = 75/117 (64%)
 Frame = +3

Query: 3   KSPPPSQKASTSSSKALPVXXXXXXXXXXXXXXXXXXXXXLVANSKESSPLEDRLKQSPK 182
           KSPPPSQKA+TSS+KA P+                      VANSKESSPL+DRLKQ P+
Sbjct: 72  KSPPPSQKATTSSAKASPLKSPMRSPVKSPVRSPVKSP---VANSKESSPLDDRLKQLPQ 128

Query: 183 QNALAAVKEEEIKCGNGLXXXXXXXXXXXPLSVRLKGNTNNANLGIGASKADAAISK 353
            NALA VK+EEIK GNGL           PLS RLKGNT N N GIGASKADAAIS+
Sbjct: 129 HNALAVVKKEEIKDGNGLKSDDNDSEDDKPLSARLKGNTKNVNQGIGASKADAAISE 185


>KDO62159.1 hypothetical protein CISIN_1g0022601mg, partial [Citrus sinensis]
           KDO62160.1 hypothetical protein CISIN_1g0022601mg,
           partial [Citrus sinensis]
          Length = 582

 Score =  116 bits (291), Expect = 4e-28
 Identities = 68/117 (58%), Positives = 75/117 (64%)
 Frame = +3

Query: 3   KSPPPSQKASTSSSKALPVXXXXXXXXXXXXXXXXXXXXXLVANSKESSPLEDRLKQSPK 182
           KSPPPSQKA+TSS+KA P                       VANSKESSPL+DRLKQSP+
Sbjct: 116 KSPPPSQKATTSSAKASPSKSPMRSPVKSPVRSPVKSP---VANSKESSPLDDRLKQSPQ 172

Query: 183 QNALAAVKEEEIKCGNGLXXXXXXXXXXXPLSVRLKGNTNNANLGIGASKADAAISK 353
            NALA VK+EEIK GNGL           PLS RLKGN+ N N GIGASKADAAIS+
Sbjct: 173 HNALAVVKKEEIKDGNGLKSDDNDSEDDKPLSARLKGNSKNVNQGIGASKADAAISE 229


>XP_006474977.1 PREDICTED: DNA topoisomerase 1-like isoform X1 [Citrus sinensis]
           XP_006474978.1 PREDICTED: DNA topoisomerase 1-like
           isoform X2 [Citrus sinensis] XP_006474979.1 PREDICTED:
           DNA topoisomerase 1-like isoform X1 [Citrus sinensis]
           XP_006474980.1 PREDICTED: DNA topoisomerase 1-like
           isoform X2 [Citrus sinensis]
          Length = 902

 Score =  116 bits (291), Expect = 5e-28
 Identities = 68/117 (58%), Positives = 75/117 (64%)
 Frame = +3

Query: 3   KSPPPSQKASTSSSKALPVXXXXXXXXXXXXXXXXXXXXXLVANSKESSPLEDRLKQSPK 182
           KSPPPSQKA+TSS+KA P                       VANSKESSPL+DRLKQSP+
Sbjct: 72  KSPPPSQKATTSSAKASPSKSPMRSPVKSPVRSPVKSP---VANSKESSPLDDRLKQSPQ 128

Query: 183 QNALAAVKEEEIKCGNGLXXXXXXXXXXXPLSVRLKGNTNNANLGIGASKADAAISK 353
            NALA VK+EEIK GNGL           PLS RLKGN+ N N GIGASKADAAIS+
Sbjct: 129 HNALAVVKKEEIKDGNGLKSDDNDSEDDKPLSARLKGNSKNVNQGIGASKADAAISE 185


>XP_002529020.1 PREDICTED: DNA topoisomerase 1 [Ricinus communis] XP_015580783.1
           PREDICTED: DNA topoisomerase 1 [Ricinus communis]
           EEF33331.1 DNA topoisomerase type I, putative [Ricinus
           communis]
          Length = 891

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 43/120 (35%), Positives = 54/120 (45%), Gaps = 10/120 (8%)
 Frame = +3

Query: 3   KSPPPSQKASTSSSKALPVXXXXXXXXXXXXXXXXXXXXXLVANSKESSPLEDRLKQSPK 182
           KSP  S KASTSS+KA P+                      VANSK SS L+++LKQ+ K
Sbjct: 77  KSPIGSPKASTSSAKASPLRSP-------------------VANSKGSSSLDEQLKQASK 117

Query: 183 QNALAAVKE----------EEIKCGNGLXXXXXXXXXXXPLSVRLKGNTNNANLGIGASK 332
           QNA   VK+          + +K                PLS R KGNTNN +  + A K
Sbjct: 118 QNASNVVKDVSSAKPEIGLKSVKHETKSNGDDEDSEDDLPLSARRKGNTNNVSKVVTAPK 177


>XP_017980434.1 PREDICTED: DNA topoisomerase 1 [Theobroma cacao] XP_007020665.2
           PREDICTED: DNA topoisomerase 1 [Theobroma cacao]
          Length = 902

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 41/109 (37%), Positives = 46/109 (42%)
 Frame = +3

Query: 3   KSPPPSQKASTSSSKALPVXXXXXXXXXXXXXXXXXXXXXLVANSKESSPLEDRLKQSPK 182
           KSP  S KASTSS+KALPV                      V N K S+ L D+ KQ+ K
Sbjct: 85  KSPILSPKASTSSTKALPVKSP-------------------VVNFKASTSLNDQSKQALK 125

Query: 183 QNALAAVKEEEIKCGNGLXXXXXXXXXXXPLSVRLKGNTNNANLGIGAS 329
           QN   AVKE                    PLS RLKG +N  N G   S
Sbjct: 126 QNMTTAVKEGRSPIKGTTEPNSDDDDDSLPLSARLKGISNQGNKGASTS 174


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