BLASTX nr result
ID: Phellodendron21_contig00018793
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00018793
(650 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KDO52429.1 hypothetical protein CISIN_1g001050mg [Citrus sinensis] 423 e-137
XP_006442883.1 hypothetical protein CICLE_v10018562mg [Citrus cl... 423 e-137
EOY29337.1 DNA-directed RNA polymerase isoform 2 [Theobroma cacao] 376 e-121
XP_011036682.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 379 e-121
EOY29338.1 DNA-directed RNA polymerase isoform 3 [Theobroma cacao] 376 e-120
EOY29336.1 DNA-directed RNA polymerase isoform 1 [Theobroma cacao] 376 e-120
XP_007011717.2 PREDICTED: DNA-directed RNA polymerases IV and V ... 375 e-119
XP_012076429.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 375 e-119
OAY53599.1 hypothetical protein MANES_03G009000 [Manihot esculenta] 373 e-118
OMO90703.1 hypothetical protein COLO4_18947 [Corchorus olitorius] 371 e-118
XP_018839587.1 PREDICTED: DNA-directed RNA polymerase D subunit ... 370 e-117
XP_002515428.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 370 e-117
OMO57303.1 hypothetical protein COLO4_35449 [Corchorus olitorius] 369 e-117
OMO69360.1 hypothetical protein COLO4_29107 [Corchorus olitorius] 363 e-116
OMO61577.1 hypothetical protein CCACVL1_23410 [Corchorus capsula... 369 e-115
GAV84304.1 RNA_pol_Rpb2_6 domain-containing protein/RNA_pol_Rpb2... 363 e-115
KJB07693.1 hypothetical protein B456_001G037900 [Gossypium raimo... 357 e-113
XP_002283296.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 359 e-113
XP_017608025.1 PREDICTED: DNA-directed RNA polymerase D subunit ... 358 e-113
XP_012452401.1 PREDICTED: DNA-directed RNA polymerase D subunit ... 357 e-112
>KDO52429.1 hypothetical protein CISIN_1g001050mg [Citrus sinensis]
Length = 1173
Score = 423 bits (1087), Expect = e-137
Identities = 204/216 (94%), Positives = 210/216 (97%)
Frame = +1
Query: 1 VENLGRIKSLTGKNYTFQSLLDNGIIELVGTEEEEDCCTAWGIKYLLKDNEDKKPMKFTH 180
VEN+G+IKSL GKNYTFQ+LLD+GIIELVGTEEEEDCCTAWGIKYLLKD EDKKP+KFTH
Sbjct: 623 VENMGKIKSLEGKNYTFQALLDHGIIELVGTEEEEDCCTAWGIKYLLKDIEDKKPIKFTH 682
Query: 181 CELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPNIRVDTLSHQLFYP 360
CELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNP+IRVDTLSHQLFYP
Sbjct: 683 CELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPSIRVDTLSHQLFYP 742
Query: 361 QRPLFRTMTSDCLGKPGYGHNGILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRASLER 540
QRPLFRTM SDCLGKPGYGHN ILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRASLER
Sbjct: 743 QRPLFRTMISDCLGKPGYGHNHILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRASLER 802
Query: 541 GMFRSEHIRSYKAEVDNKEMQVKRRPSDDTVNFGKI 648
GMFRSEHIRSYKAEVDNKEMQVKRR SDD VNFGKI
Sbjct: 803 GMFRSEHIRSYKAEVDNKEMQVKRRSSDDMVNFGKI 838
>XP_006442883.1 hypothetical protein CICLE_v10018562mg [Citrus clementina]
XP_006478802.1 PREDICTED: DNA-directed RNA polymerases IV
and V subunit 2-like [Citrus sinensis] ESR56123.1
hypothetical protein CICLE_v10018562mg [Citrus
clementina]
Length = 1198
Score = 423 bits (1087), Expect = e-137
Identities = 204/216 (94%), Positives = 210/216 (97%)
Frame = +1
Query: 1 VENLGRIKSLTGKNYTFQSLLDNGIIELVGTEEEEDCCTAWGIKYLLKDNEDKKPMKFTH 180
VEN+G+IKSL GKNYTFQ+LLD+GIIELVGTEEEEDCCTAWGIKYLLKD EDKKP+KFTH
Sbjct: 648 VENMGKIKSLEGKNYTFQALLDHGIIELVGTEEEEDCCTAWGIKYLLKDIEDKKPIKFTH 707
Query: 181 CELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPNIRVDTLSHQLFYP 360
CELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNP+IRVDTLSHQLFYP
Sbjct: 708 CELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPSIRVDTLSHQLFYP 767
Query: 361 QRPLFRTMTSDCLGKPGYGHNGILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRASLER 540
QRPLFRTM SDCLGKPGYGHN ILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRASLER
Sbjct: 768 QRPLFRTMISDCLGKPGYGHNHILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRASLER 827
Query: 541 GMFRSEHIRSYKAEVDNKEMQVKRRPSDDTVNFGKI 648
GMFRSEHIRSYKAEVDNKEMQVKRR SDD VNFGKI
Sbjct: 828 GMFRSEHIRSYKAEVDNKEMQVKRRSSDDMVNFGKI 863
>EOY29337.1 DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
Length = 961
Score = 376 bits (965), Expect = e-121
Identities = 182/218 (83%), Positives = 199/218 (91%), Gaps = 2/218 (0%)
Frame = +1
Query: 1 VENLGRIKSLTGKNYTFQSLLDNGIIELVGTEEEEDCCTAWGIKYLLKDNEDKKPMKFTH 180
V+NL RIK+ G+NYTFQ+LL+ GIIELVGTEEEEDC TAW IKYLL D E K+P+K+TH
Sbjct: 411 VDNLNRIKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAWSIKYLLTDVEGKQPVKYTH 470
Query: 181 CELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPNIRVDTLSHQLFYP 360
CELDMSFLLGLSCGIIPFANHDHARRVLYQ+QKHS QAIGF TTNPNIRVDTLSHQL+YP
Sbjct: 471 CELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQLYYP 530
Query: 361 QRPLFRTMTSDCLGKPGY--GHNGILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRASL 534
QRPLFRTMTSDCLGK G+ G G+LP+PELYNGQNAIVAVNVHLGYNQEDSLVMNR+SL
Sbjct: 531 QRPLFRTMTSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRSSL 590
Query: 535 ERGMFRSEHIRSYKAEVDNKEMQVKRRPSDDTVNFGKI 648
ERGMFRSEH+RSYKAEVDNKE+Q KRR S+D VNFGKI
Sbjct: 591 ERGMFRSEHVRSYKAEVDNKEIQDKRRKSEDIVNFGKI 628
>XP_011036682.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Populus euphratica]
Length = 1190
Score = 379 bits (972), Expect = e-121
Identities = 182/218 (83%), Positives = 196/218 (89%), Gaps = 2/218 (0%)
Frame = +1
Query: 1 VENLGRIKSLTGKNYTFQSLLDNGIIELVGTEEEEDCCTAWGIKYLLKDNEDKKPMKFTH 180
VENL +IK+ G NY F SLLD GIIE +GTEEEEDCCTAWGIK+LL D E K+PMK+TH
Sbjct: 644 VENLDKIKAFKGGNYIFTSLLDKGIIEFIGTEEEEDCCTAWGIKFLLADIEGKQPMKYTH 703
Query: 181 CELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPNIRVDTLSHQLFYP 360
CELDMSFLLGLSCGIIPFANHDHARRVLYQ+QKHS QAIGF TTNPNIRVDTLSHQL YP
Sbjct: 704 CELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQLHYP 763
Query: 361 QRPLFRTMTSDCLGKPGY--GHNGILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRASL 534
QRPLFRTM SDCLGKPGY GHN +LP+PEL+NGQNAIVAVNVHLGYNQEDSLVMNRASL
Sbjct: 764 QRPLFRTMISDCLGKPGYPLGHNAVLPKPELFNGQNAIVAVNVHLGYNQEDSLVMNRASL 823
Query: 535 ERGMFRSEHIRSYKAEVDNKEMQVKRRPSDDTVNFGKI 648
ERGMFRSEHIRSYKAEVDNKE+ KRR S+D++ FGKI
Sbjct: 824 ERGMFRSEHIRSYKAEVDNKELTDKRRKSEDSITFGKI 861
>EOY29338.1 DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
Length = 1073
Score = 376 bits (965), Expect = e-120
Identities = 182/218 (83%), Positives = 199/218 (91%), Gaps = 2/218 (0%)
Frame = +1
Query: 1 VENLGRIKSLTGKNYTFQSLLDNGIIELVGTEEEEDCCTAWGIKYLLKDNEDKKPMKFTH 180
V+NL RIK+ G+NYTFQ+LL+ GIIELVGTEEEEDC TAW IKYLL D E K+P+K+TH
Sbjct: 638 VDNLNRIKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAWSIKYLLTDVEGKQPVKYTH 697
Query: 181 CELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPNIRVDTLSHQLFYP 360
CELDMSFLLGLSCGIIPFANHDHARRVLYQ+QKHS QAIGF TTNPNIRVDTLSHQL+YP
Sbjct: 698 CELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQLYYP 757
Query: 361 QRPLFRTMTSDCLGKPGY--GHNGILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRASL 534
QRPLFRTMTSDCLGK G+ G G+LP+PELYNGQNAIVAVNVHLGYNQEDSLVMNR+SL
Sbjct: 758 QRPLFRTMTSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRSSL 817
Query: 535 ERGMFRSEHIRSYKAEVDNKEMQVKRRPSDDTVNFGKI 648
ERGMFRSEH+RSYKAEVDNKE+Q KRR S+D VNFGKI
Sbjct: 818 ERGMFRSEHVRSYKAEVDNKEIQDKRRKSEDIVNFGKI 855
>EOY29336.1 DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
Length = 1184
Score = 376 bits (965), Expect = e-120
Identities = 182/218 (83%), Positives = 199/218 (91%), Gaps = 2/218 (0%)
Frame = +1
Query: 1 VENLGRIKSLTGKNYTFQSLLDNGIIELVGTEEEEDCCTAWGIKYLLKDNEDKKPMKFTH 180
V+NL RIK+ G+NYTFQ+LL+ GIIELVGTEEEEDC TAW IKYLL D E K+P+K+TH
Sbjct: 638 VDNLNRIKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAWSIKYLLTDVEGKQPVKYTH 697
Query: 181 CELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPNIRVDTLSHQLFYP 360
CELDMSFLLGLSCGIIPFANHDHARRVLYQ+QKHS QAIGF TTNPNIRVDTLSHQL+YP
Sbjct: 698 CELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQLYYP 757
Query: 361 QRPLFRTMTSDCLGKPGY--GHNGILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRASL 534
QRPLFRTMTSDCLGK G+ G G+LP+PELYNGQNAIVAVNVHLGYNQEDSLVMNR+SL
Sbjct: 758 QRPLFRTMTSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRSSL 817
Query: 535 ERGMFRSEHIRSYKAEVDNKEMQVKRRPSDDTVNFGKI 648
ERGMFRSEH+RSYKAEVDNKE+Q KRR S+D VNFGKI
Sbjct: 818 ERGMFRSEHVRSYKAEVDNKEIQDKRRKSEDIVNFGKI 855
>XP_007011717.2 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Theobroma
cacao]
Length = 1184
Score = 375 bits (963), Expect = e-119
Identities = 182/218 (83%), Positives = 198/218 (90%), Gaps = 2/218 (0%)
Frame = +1
Query: 1 VENLGRIKSLTGKNYTFQSLLDNGIIELVGTEEEEDCCTAWGIKYLLKDNEDKKPMKFTH 180
V+NL R K+ G+NYTFQ+LL+ GIIELVGTEEEEDC TAW IKYLL D E K+P+K+TH
Sbjct: 638 VDNLNRTKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAWSIKYLLTDVEGKQPVKYTH 697
Query: 181 CELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPNIRVDTLSHQLFYP 360
CELDMSFLLGLSCGIIPFANHDHARRVLYQ+QKHS QAIGF TTNPNIRVDTLSHQL+YP
Sbjct: 698 CELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQLYYP 757
Query: 361 QRPLFRTMTSDCLGKPGY--GHNGILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRASL 534
QRPLFRTMTSDCLGK G+ G G+LP+PELYNGQNAIVAVNVHLGYNQEDSLVMNRASL
Sbjct: 758 QRPLFRTMTSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRASL 817
Query: 535 ERGMFRSEHIRSYKAEVDNKEMQVKRRPSDDTVNFGKI 648
ERGMFRSEH+RSYKAEVDNKE+Q KRR S+D VNFGKI
Sbjct: 818 ERGMFRSEHVRSYKAEVDNKEIQDKRRKSEDIVNFGKI 855
>XP_012076429.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Jatropha curcas] XP_012076430.1 PREDICTED: DNA-directed
RNA polymerases IV and V subunit 2-like [Jatropha curcas]
KDP33515.1 hypothetical protein JCGZ_07086 [Jatropha
curcas]
Length = 1209
Score = 375 bits (964), Expect = e-119
Identities = 180/218 (82%), Positives = 199/218 (91%), Gaps = 2/218 (0%)
Frame = +1
Query: 1 VENLGRIKSLTGKNYTFQSLLDNGIIELVGTEEEEDCCTAWGIKYLLKDNEDKKPMKFTH 180
VENL +IK+ G NYTFQSLLD GIIE +GTEEEEDC TAWGIK+L+ + K+P+K+TH
Sbjct: 663 VENLHKIKAFKGGNYTFQSLLDKGIIEFIGTEEEEDCSTAWGIKFLVAGVDKKQPLKYTH 722
Query: 181 CELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPNIRVDTLSHQLFYP 360
CELDMSFLLGLSCGIIPFANHDHARRVLYQ+QKHS QAIGFPTTNPNIRVDTLSHQL YP
Sbjct: 723 CELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPNIRVDTLSHQLHYP 782
Query: 361 QRPLFRTMTSDCLGKPGY--GHNGILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRASL 534
QRPLFRT+T+DCLGKPGY GH+G+LP+PEL+NGQNAIVAVNVHLGYNQEDSLVMNRASL
Sbjct: 783 QRPLFRTVTADCLGKPGYARGHHGMLPKPELFNGQNAIVAVNVHLGYNQEDSLVMNRASL 842
Query: 535 ERGMFRSEHIRSYKAEVDNKEMQVKRRPSDDTVNFGKI 648
ERGMFRSEHIRSYKA+VDNKE+ KRR +DTVNFGKI
Sbjct: 843 ERGMFRSEHIRSYKADVDNKELLDKRRKFEDTVNFGKI 880
>OAY53599.1 hypothetical protein MANES_03G009000 [Manihot esculenta]
Length = 1205
Score = 373 bits (957), Expect = e-118
Identities = 179/218 (82%), Positives = 196/218 (89%), Gaps = 2/218 (0%)
Frame = +1
Query: 1 VENLGRIKSLTGKNYTFQSLLDNGIIELVGTEEEEDCCTAWGIKYLLKDNEDKKPMKFTH 180
V+NL +IK+ G NYTFQSLLD GI+E VGTEEEEDC AWG+K+LL + K+ +K+TH
Sbjct: 659 VQNLTKIKAFKGGNYTFQSLLDKGIVEFVGTEEEEDCSIAWGVKFLLAGPDGKQSLKYTH 718
Query: 181 CELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPNIRVDTLSHQLFYP 360
CELD+SFLLGLSCGIIPFANHDHARRVLYQ+QKHS QAIGFPTTNPNIRVDTLSHQL YP
Sbjct: 719 CELDLSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPNIRVDTLSHQLHYP 778
Query: 361 QRPLFRTMTSDCLGKPGY--GHNGILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRASL 534
QRPLFRTMTSDCLGKPGY GHNG+LP+PELYNGQNAIVAVNVHLGYNQEDSLVMNR+SL
Sbjct: 779 QRPLFRTMTSDCLGKPGYRRGHNGMLPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRSSL 838
Query: 535 ERGMFRSEHIRSYKAEVDNKEMQVKRRPSDDTVNFGKI 648
ERGMFRSEHIRSYKA+VDNKE+ KRR DD VNFGKI
Sbjct: 839 ERGMFRSEHIRSYKADVDNKELVDKRRRFDDPVNFGKI 876
>OMO90703.1 hypothetical protein COLO4_18947 [Corchorus olitorius]
Length = 1201
Score = 371 bits (952), Expect = e-118
Identities = 181/219 (82%), Positives = 197/219 (89%), Gaps = 3/219 (1%)
Frame = +1
Query: 1 VENLGRIKSLTG-KNYTFQSLLDNGIIELVGTEEEEDCCTAWGIKYLLKDNEDKKPMKFT 177
VENL +IKS KN+TFQSLLD GI+EL+GTEEEEDC TAWGIKYLL D + K+ +K+T
Sbjct: 640 VENLSKIKSFKAEKNFTFQSLLDKGIVELIGTEEEEDCRTAWGIKYLLADVKGKESVKYT 699
Query: 178 HCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPNIRVDTLSHQLFY 357
HCELDMSFLLGLSCGIIPFANHDHARRVLYQ+QKHS QAIGF TTNPNIRVDTLSHQ++Y
Sbjct: 700 HCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQMYY 759
Query: 358 PQRPLFRTMTSDCLGKPGY--GHNGILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRAS 531
PQRPLFRTMTSDCLGKPGY G NG+ P+PELYNGQNAIVAVNVHLGYNQEDSLVMNRAS
Sbjct: 760 PQRPLFRTMTSDCLGKPGYPLGQNGLEPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRAS 819
Query: 532 LERGMFRSEHIRSYKAEVDNKEMQVKRRPSDDTVNFGKI 648
LERGMFRSEH+RSYKAEVDN+EMQ K+R D VNFGKI
Sbjct: 820 LERGMFRSEHVRSYKAEVDNQEMQDKKRKLGDVVNFGKI 858
>XP_018839587.1 PREDICTED: DNA-directed RNA polymerase D subunit 2b-like [Juglans
regia]
Length = 1191
Score = 370 bits (951), Expect = e-117
Identities = 179/218 (82%), Positives = 192/218 (88%), Gaps = 2/218 (0%)
Frame = +1
Query: 1 VENLGRIKSLTGKNYTFQSLLDNGIIELVGTEEEEDCCTAWGIKYLLKDNEDKKPMKFTH 180
VENL ++K G+NYTFQ LLD GIIEL+GTEEEEDC TAWGIKYL + E K P ++TH
Sbjct: 645 VENLNKVKGYKGENYTFQYLLDKGIIELIGTEEEEDCRTAWGIKYLFMEKEGKSPAQYTH 704
Query: 181 CELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPNIRVDTLSHQLFYP 360
CELDMSFLLGLSCGI+P+ANHDHARRVLYQSQKHSSQAIGF TTNPNIRVDTLSH L YP
Sbjct: 705 CELDMSFLLGLSCGIVPYANHDHARRVLYQSQKHSSQAIGFSTTNPNIRVDTLSHSLLYP 764
Query: 361 QRPLFRTMTSDCLGKPG--YGHNGILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRASL 534
QRPLFRT+ SDCLGKPG GH+GILP+PELYNGQNAIVAVNVHLGYNQEDSLVMN+ASL
Sbjct: 765 QRPLFRTIASDCLGKPGSPLGHHGILPKPELYNGQNAIVAVNVHLGYNQEDSLVMNKASL 824
Query: 535 ERGMFRSEHIRSYKAEVDNKEMQVKRRPSDDTVNFGKI 648
ERGMFRSEHIRSYKAEVDNKE KRR DD VNFGKI
Sbjct: 825 ERGMFRSEHIRSYKAEVDNKETLEKRRKPDDCVNFGKI 862
>XP_002515428.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Ricinus
communis] EEF46877.1 DNA-directed RNA polymerase subunit,
putative [Ricinus communis]
Length = 1203
Score = 370 bits (951), Expect = e-117
Identities = 180/218 (82%), Positives = 196/218 (89%), Gaps = 2/218 (0%)
Frame = +1
Query: 1 VENLGRIKSLTGKNYTFQSLLDNGIIELVGTEEEEDCCTAWGIKYLLKDNEDKKPMKFTH 180
V+NL +I++ G N TFQSLLD GIIE VGTEEEEDC TAWGIK+LL + K+ +K+TH
Sbjct: 657 VQNLHKIEAFKGGNCTFQSLLDKGIIEFVGTEEEEDCSTAWGIKFLLSGVDGKQSLKYTH 716
Query: 181 CELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPNIRVDTLSHQLFYP 360
CELDMSFLLGLSCGIIPFANHDHARRVLYQ+QKHS QAIGFPTTNPNIRVDTLSHQL+YP
Sbjct: 717 CELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPNIRVDTLSHQLYYP 776
Query: 361 QRPLFRTMTSDCLGKPG--YGHNGILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRASL 534
QRPLFRT+TSDCLGKPG GHNGI+P+PELYNGQNAIVAVNVHLGYNQEDSLVMNRASL
Sbjct: 777 QRPLFRTVTSDCLGKPGDTRGHNGIVPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRASL 836
Query: 535 ERGMFRSEHIRSYKAEVDNKEMQVKRRPSDDTVNFGKI 648
ERGMFRSEHIRSYKA+VDNKE+ KRR DD VNFGKI
Sbjct: 837 ERGMFRSEHIRSYKADVDNKELLDKRRKYDDNVNFGKI 874
>OMO57303.1 hypothetical protein COLO4_35449 [Corchorus olitorius]
Length = 1196
Score = 369 bits (946), Expect = e-117
Identities = 177/219 (80%), Positives = 197/219 (89%), Gaps = 3/219 (1%)
Frame = +1
Query: 1 VENLGRIKSLTG-KNYTFQSLLDNGIIELVGTEEEEDCCTAWGIKYLLKDNEDKKPMKFT 177
VENL +IK+ K +TFQSLLD GI+EL+GTEEEEDCCTAWGIKYLL D + K+ +K+T
Sbjct: 651 VENLSKIKAFKAEKKFTFQSLLDKGIVELIGTEEEEDCCTAWGIKYLLADVKGKESVKYT 710
Query: 178 HCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPNIRVDTLSHQLFY 357
HCELDMSFLLGLSCGIIPFANHDHARRVLYQ+QKHS QAIGF TTNPNIRVDTLSHQ++Y
Sbjct: 711 HCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQMYY 770
Query: 358 PQRPLFRTMTSDCLGKPGY--GHNGILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRAS 531
PQRPLFRTMTSDCLGKPGY G NG+ P+PELYNGQNAIVAVNVHLG+NQEDSLVMNRAS
Sbjct: 771 PQRPLFRTMTSDCLGKPGYPLGQNGLAPKPELYNGQNAIVAVNVHLGFNQEDSLVMNRAS 830
Query: 532 LERGMFRSEHIRSYKAEVDNKEMQVKRRPSDDTVNFGKI 648
LERGMFRSEH+RSYKAEVDN+E+Q K+R +D V FGKI
Sbjct: 831 LERGMFRSEHVRSYKAEVDNQELQDKKRKLEDIVKFGKI 869
>OMO69360.1 hypothetical protein COLO4_29107 [Corchorus olitorius]
Length = 1034
Score = 363 bits (932), Expect = e-116
Identities = 177/219 (80%), Positives = 196/219 (89%), Gaps = 3/219 (1%)
Frame = +1
Query: 1 VENLGRIKSLTG-KNYTFQSLLDNGIIELVGTEEEEDCCTAWGIKYLLKDNEDKKPMKFT 177
V+NL +IK+ KN+TFQSLLD GIIEL+GTEEEEDC AWGIKYLL D ++K+ +K+T
Sbjct: 473 VKNLSKIKAFKAEKNFTFQSLLDKGIIELIGTEEEEDCRNAWGIKYLLADVKEKESVKYT 532
Query: 178 HCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPNIRVDTLSHQLFY 357
HCELDMSFLLGLSCGIIPFANHDHARRVLYQ+QKHS QAIGF TTNPNIRVDTLSHQ++Y
Sbjct: 533 HCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQMYY 592
Query: 358 PQRPLFRTMTSDCLGKPGY--GHNGILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRAS 531
PQRPLFRTMTSDCLGKPGY G NG+ P+PELYNGQ AIVAVNVHLGYNQEDSLVMNRAS
Sbjct: 593 PQRPLFRTMTSDCLGKPGYPLGQNGLEPKPELYNGQIAIVAVNVHLGYNQEDSLVMNRAS 652
Query: 532 LERGMFRSEHIRSYKAEVDNKEMQVKRRPSDDTVNFGKI 648
LERGMFRSEH+RSYKAEVDN+EM K+R +D VNFGKI
Sbjct: 653 LERGMFRSEHVRSYKAEVDNQEMSDKKRKLEDIVNFGKI 691
>OMO61577.1 hypothetical protein CCACVL1_23410 [Corchorus capsularis]
Length = 1461
Score = 369 bits (946), Expect = e-115
Identities = 180/219 (82%), Positives = 196/219 (89%), Gaps = 3/219 (1%)
Frame = +1
Query: 1 VENLGRIKSLTG-KNYTFQSLLDNGIIELVGTEEEEDCCTAWGIKYLLKDNEDKKPMKFT 177
VENL +IKS KN+TFQSLLD GI+EL+GTEEEEDC TAWGIKYLL D + K+ +K+T
Sbjct: 900 VENLSKIKSFKAEKNFTFQSLLDKGIVELIGTEEEEDCRTAWGIKYLLADVKGKESVKYT 959
Query: 178 HCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPNIRVDTLSHQLFY 357
HCELDMSFLLGLSCGIIPFANHDHARRVLYQ+QKHS QAIGF TTNPNIRVDTLSHQ++Y
Sbjct: 960 HCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQMYY 1019
Query: 358 PQRPLFRTMTSDCLGKPGY--GHNGILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRAS 531
PQRPLF TMTSDCLGKPGY G NG+ P+PELYNGQNAIVAVNVHLGYNQEDSLVMNRAS
Sbjct: 1020 PQRPLFHTMTSDCLGKPGYPLGQNGLEPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRAS 1079
Query: 532 LERGMFRSEHIRSYKAEVDNKEMQVKRRPSDDTVNFGKI 648
LERGMFRSEH+RSYKAEVDN+EMQ K+R D VNFGKI
Sbjct: 1080 LERGMFRSEHVRSYKAEVDNQEMQDKKRKLGDIVNFGKI 1118
>GAV84304.1 RNA_pol_Rpb2_6 domain-containing protein/RNA_pol_Rpb2_7
domain-containing protein/RNA_pol_Rpb2_2
domain-containing protein/RNA_pol_Rpb2_1
domain-containing protein/RNA_pol_Rpb2_3
domain-containing protein/RNA_pol_Rpb2_4
domain-containing protein/RNA_pol_Rpb2_5
domain-containing protein [Cephalotus follicularis]
Length = 1196
Score = 363 bits (933), Expect = e-115
Identities = 177/218 (81%), Positives = 193/218 (88%), Gaps = 2/218 (0%)
Frame = +1
Query: 1 VENLGRIKSLTGKNYTFQSLLDNGIIELVGTEEEEDCCTAWGIKYLLKDNEDKKPMKFTH 180
VENL +IK+ +YTFQS LD GIIEL+G EEEEDC TAWGIKYLL + E+K+P+K+TH
Sbjct: 652 VENLIKIKAFKSDSYTFQSFLDKGIIELIGAEEEEDCRTAWGIKYLLMEVEEKQPLKYTH 711
Query: 181 CELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPNIRVDTLSHQLFYP 360
CELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHS QAIGF TTNP+IRVDTLSHQL YP
Sbjct: 712 CELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSQQAIGFSTTNPSIRVDTLSHQLHYP 771
Query: 361 QRPLFRTMTSDCLGKPGY--GHNGILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRASL 534
QRPLFRTM SDCLGKP Y G GI+P+PE YNGQNAIVAVNVHLGYNQEDSLVMNRASL
Sbjct: 772 QRPLFRTMASDCLGKPEYPLGPKGIVPKPEYYNGQNAIVAVNVHLGYNQEDSLVMNRASL 831
Query: 535 ERGMFRSEHIRSYKAEVDNKEMQVKRRPSDDTVNFGKI 648
ERGMFRSEHIRSYKAEVDNKE+Q K+R +D +NFGKI
Sbjct: 832 ERGMFRSEHIRSYKAEVDNKELQDKKRKLEDCINFGKI 869
>KJB07693.1 hypothetical protein B456_001G037900 [Gossypium raimondii]
Length = 1038
Score = 357 bits (916), Expect = e-113
Identities = 171/218 (78%), Positives = 194/218 (88%), Gaps = 3/218 (1%)
Frame = +1
Query: 1 VENLGRIKSLTGK-NYTFQSLLDNGIIELVGTEEEEDCCTAWGIKYLLKDNEDKKPMKFT 177
VENL ++K+ GK NY FQ LLD GI+EL+G EEEEDC TAWGI+YLL + E K+P+K+T
Sbjct: 657 VENLFKLKAFKGKENYAFQPLLDKGIVELIGAEEEEDCRTAWGIRYLLTEVEGKQPVKYT 716
Query: 178 HCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPNIRVDTLSHQLFY 357
HCELDMSFLLGLSCGIIPFANHDHARRVLYQ+QKHS QAIGF TTNPNIRVDTLSHQ++Y
Sbjct: 717 HCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQMYY 776
Query: 358 PQRPLFRTMTSDCLGKPGY--GHNGILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRAS 531
PQRPLF TMT+DCLGK G+ G N + P+PELYNGQNAIVAVNVHLGYNQEDSLVMNRAS
Sbjct: 777 PQRPLFHTMTADCLGKSGFPLGQNRLEPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRAS 836
Query: 532 LERGMFRSEHIRSYKAEVDNKEMQVKRRPSDDTVNFGK 645
+ERGMFR+EH+RSYKAEVDNKE+Q KRR ++D VNFGK
Sbjct: 837 IERGMFRTEHVRSYKAEVDNKEIQEKRRKAEDIVNFGK 874
>XP_002283296.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Vitis
vinifera] XP_010648748.1 PREDICTED: DNA-directed RNA
polymerases IV and V subunit 2 [Vitis vinifera]
Length = 1198
Score = 359 bits (922), Expect = e-113
Identities = 173/218 (79%), Positives = 195/218 (89%), Gaps = 2/218 (0%)
Frame = +1
Query: 1 VENLGRIKSLTGKNYTFQSLLDNGIIELVGTEEEEDCCTAWGIKYLLKDNEDKKPMKFTH 180
VENL ++K+ G ++TFQSLLD GI+EL+G EEEEDC TAWGIKYLLK ++D P+K+TH
Sbjct: 653 VENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLLKGHDDP-PVKYTH 711
Query: 181 CELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPNIRVDTLSHQLFYP 360
CELDMSFLLGLSCGIIP+ANHDHARRVLYQS+KHS QAIGF TTNPNIRVDTLSHQL+YP
Sbjct: 712 CELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQLYYP 771
Query: 361 QRPLFRTMTSDCLGKPGY--GHNGILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRASL 534
QRPLFRTM SDCLGKPGY GH GI+PRPE +NGQ AIVAVNVHLGYNQEDSLVMNRASL
Sbjct: 772 QRPLFRTMISDCLGKPGYSEGHKGIVPRPEYFNGQIAIVAVNVHLGYNQEDSLVMNRASL 831
Query: 535 ERGMFRSEHIRSYKAEVDNKEMQVKRRPSDDTVNFGKI 648
ERGMFRSEHIRSYK+EVDN E K+R S+D+V+FGK+
Sbjct: 832 ERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKM 869
>XP_017608025.1 PREDICTED: DNA-directed RNA polymerase D subunit 2b-like [Gossypium
arboreum] KHG03399.1 DNA-directed RNA polymerase D
subunit 2a -like protein [Gossypium arboreum]
Length = 1204
Score = 358 bits (919), Expect = e-113
Identities = 172/218 (78%), Positives = 194/218 (88%), Gaps = 3/218 (1%)
Frame = +1
Query: 1 VENLGRIKSLTGK-NYTFQSLLDNGIIELVGTEEEEDCCTAWGIKYLLKDNEDKKPMKFT 177
VENL ++K+ GK NY FQ LLD GI+EL+G EEEEDC TAWGI+YLL + E K+P+K+T
Sbjct: 657 VENLFKLKAFKGKENYAFQPLLDKGIVELIGAEEEEDCRTAWGIRYLLTEVEGKQPVKYT 716
Query: 178 HCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPNIRVDTLSHQLFY 357
HCELDMSFLLGLSCGIIPFANHDHARRVLYQ+QKHS QAIGF TTNPNIRVDTLSHQ++Y
Sbjct: 717 HCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQMYY 776
Query: 358 PQRPLFRTMTSDCLGKPGY--GHNGILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRAS 531
PQRPLF TMTSDCLGK G+ G N + P+PELYNGQNAIVAVNVHLGYNQEDSLVMNRAS
Sbjct: 777 PQRPLFHTMTSDCLGKSGFPLGQNRLEPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRAS 836
Query: 532 LERGMFRSEHIRSYKAEVDNKEMQVKRRPSDDTVNFGK 645
+ERGMFR+EH+RSYKAEVDNKE+Q KRR ++D VNFGK
Sbjct: 837 IERGMFRTEHVRSYKAEVDNKEIQEKRRKAEDIVNFGK 874
>XP_012452401.1 PREDICTED: DNA-directed RNA polymerase D subunit 2b-like [Gossypium
raimondii] KJB07692.1 hypothetical protein
B456_001G037900 [Gossypium raimondii]
Length = 1204
Score = 357 bits (916), Expect = e-112
Identities = 171/218 (78%), Positives = 194/218 (88%), Gaps = 3/218 (1%)
Frame = +1
Query: 1 VENLGRIKSLTGK-NYTFQSLLDNGIIELVGTEEEEDCCTAWGIKYLLKDNEDKKPMKFT 177
VENL ++K+ GK NY FQ LLD GI+EL+G EEEEDC TAWGI+YLL + E K+P+K+T
Sbjct: 657 VENLFKLKAFKGKENYAFQPLLDKGIVELIGAEEEEDCRTAWGIRYLLTEVEGKQPVKYT 716
Query: 178 HCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPNIRVDTLSHQLFY 357
HCELDMSFLLGLSCGIIPFANHDHARRVLYQ+QKHS QAIGF TTNPNIRVDTLSHQ++Y
Sbjct: 717 HCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQMYY 776
Query: 358 PQRPLFRTMTSDCLGKPGY--GHNGILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRAS 531
PQRPLF TMT+DCLGK G+ G N + P+PELYNGQNAIVAVNVHLGYNQEDSLVMNRAS
Sbjct: 777 PQRPLFHTMTADCLGKSGFPLGQNRLEPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRAS 836
Query: 532 LERGMFRSEHIRSYKAEVDNKEMQVKRRPSDDTVNFGK 645
+ERGMFR+EH+RSYKAEVDNKE+Q KRR ++D VNFGK
Sbjct: 837 IERGMFRTEHVRSYKAEVDNKEIQEKRRKAEDIVNFGK 874