BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00018228
         (781 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EMS62068.1 DNA-directed RNA polymerase subunit alpha [Triticum u...    45   4e-08

>EMS62068.1 DNA-directed RNA polymerase subunit alpha [Triticum urartu]
          Length = 430

 Score = 44.7 bits (104), Expect(2) = 4e-08
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = -1

Query: 736 IHPPKEPDMIIFHHPARARINQ 671
           IHPPKEPDM I+HHPARAR+ +
Sbjct: 339 IHPPKEPDMRIYHHPARARVKE 360



 Score = 41.2 bits (95), Expect(2) = 4e-08
 Identities = 24/42 (57%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = -3

Query: 581 RFYFTKL--QLSIARNSVLTGPCSIPK*AYKIHHDQELSGSS 462
           RF F KL  QL I  N +L G CSI K AYK  HDQ L G S
Sbjct: 386 RFSFPKLHLQLLIENNPILMGKCSISKWAYKFDHDQLLCGLS 427