BLASTX nr result

ID: Phellodendron21_contig00015853 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00015853
         (520 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010101328.1 40S ribosomal protein SA [Morus notabilis] EXB882...    55   5e-06
XP_019055329.1 PREDICTED: 40S ribosomal protein SA-like isoform ...    55   5e-06

>XP_010101328.1 40S ribosomal protein SA [Morus notabilis] EXB88275.1 40S ribosomal
           protein SA [Morus notabilis]
          Length = 294

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 34/79 (43%), Positives = 39/79 (49%), Gaps = 24/79 (30%)
 Frame = +3

Query: 3   FYREPEDY-------ANVAPEYNMN-------------LTSDQWPTQISDAQWPADAVP- 119
           FYREPE+        A VAP+Y +              L +DQWPTQI+DA W AD  P 
Sbjct: 176 FYREPEEAKQHEDEEAVVAPDYGITDYSAAAVGVPDYGLATDQWPTQITDASWAADVRPP 235

Query: 120 ---VAGDGWTAPDFPARLP 167
              VA DGW A   PA  P
Sbjct: 236 IPAVAADGWAAEAAPAPAP 254


>XP_019055329.1 PREDICTED: 40S ribosomal protein SA-like isoform X2 [Nelumbo
           nucifera]
          Length = 299

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 36/79 (45%), Positives = 41/79 (51%), Gaps = 20/79 (25%)
 Frame = +3

Query: 3   FYREPE-------DYANVAPEYN--------MNLTSDQWPTQISDAQW----PADAVPVA 125
           FYREPE       D A VAP+Y         + L +DQWP QI+DAQW     A A+PVA
Sbjct: 203 FYREPEEAKEHEEDEAVVAPDYGVQEFSSATLGLPADQWPAQIADAQWAPEIAAPALPVA 262

Query: 126 GDGWT-APDFPARLPTGWD 179
              WT AP  P     GWD
Sbjct: 263 TVDWTSAPAVPLSGGDGWD 281


Top