BLASTX nr result

ID: Phellodendron21_contig00014585 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00014585
         (1001 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006430311.1 hypothetical protein CICLE_v10012216mg [Citrus cl...    89   2e-16
XP_018839505.1 PREDICTED: splicing factor U2af small subunit B-l...    63   2e-07
KZM91855.1 hypothetical protein DCAR_020780 [Daucus carota subsp...    61   4e-07
XP_017258326.1 PREDICTED: splicing factor U2af small subunit B-l...    61   8e-07
OMO90235.1 hypothetical protein COLO4_19287 [Corchorus olitorius]      60   1e-06
XP_008241308.1 PREDICTED: splicing factor U2af small subunit B-l...    59   3e-06
OMO58324.1 Zinc finger, CCCH-type [Corchorus capsularis]               59   3e-06
XP_006381324.1 hypothetical protein POPTR_0006s11790g [Populus t...    58   7e-06

>XP_006430311.1 hypothetical protein CICLE_v10012216mg [Citrus clementina]
           XP_006430312.1 hypothetical protein CICLE_v10012216mg
           [Citrus clementina] XP_006481906.1 PREDICTED: splicing
           factor U2af small subunit B [Citrus sinensis] ESR43551.1
           hypothetical protein CICLE_v10012216mg [Citrus
           clementina] ESR43552.1 hypothetical protein
           CICLE_v10012216mg [Citrus clementina] KDO61019.1
           hypothetical protein CISIN_1g045807mg [Citrus sinensis]
          Length = 320

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 42/64 (65%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
 Frame = -3

Query: 993 RNRSPVXXXXXXXXXRIEQWNREKEEADSGSKVDNSNYNDERNNGERD-NGFAPSGGAYS 817
           R RSPV         +IEQWNREKE+ADSG+KVDNS+YND+RN+ +RD NGF P+GG YS
Sbjct: 256 RRRSPVRESSVERRAKIEQWNREKEQADSGNKVDNSSYNDDRNDDDRDGNGFTPNGGEYS 315

Query: 816 DPQQ 805
           DPQQ
Sbjct: 316 DPQQ 319


>XP_018839505.1 PREDICTED: splicing factor U2af small subunit B-like [Juglans
           regia]
          Length = 329

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 33/72 (45%), Positives = 44/72 (61%)
 Frame = -3

Query: 996 RRNRSPVXXXXXXXXXRIEQWNREKEEADSGSKVDNSNYNDERNNGERDNGFAPSGGAYS 817
           RRNRSPV         +IEQWNRE+E+ DSG K +    +D+R      NGFA +   Y+
Sbjct: 264 RRNRSPVRESSAERRAKIEQWNREREQVDSGPKNNEGRIDDDR------NGFAQNSDEYN 317

Query: 816 DPQQQ*QSGEYN 781
           DP+QQ Q G+Y+
Sbjct: 318 DPEQQ-QRGQYD 328


>KZM91855.1 hypothetical protein DCAR_020780 [Daucus carota subsp. sativus]
          Length = 252

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
 Frame = -3

Query: 996 RRNRSPVXXXXXXXXXRIEQWNREKEEADSGSKVDNSNYNDERNNGERDNGFAPSGGAYS 817
           RRN+SPV         +IEQWNRE+++A++G+K  N+  ND+RN+    NG A +   Y 
Sbjct: 176 RRNKSPVREGSAERRAKIEQWNRERDQAETGNKSANNYSNDDRNSDGNGNGNAHNKEQYY 235

Query: 816 DPQQQ*QS----GEYNN 778
           +P QQ Q+    G Y+N
Sbjct: 236 EPHQQRQNVPDDGGYSN 252


>XP_017258326.1 PREDICTED: splicing factor U2af small subunit B-like [Daucus carota
           subsp. sativus] XP_017258327.1 PREDICTED: splicing
           factor U2af small subunit B-like [Daucus carota subsp.
           sativus] XP_017258328.1 PREDICTED: splicing factor U2af
           small subunit B-like [Daucus carota subsp. sativus]
          Length = 329

 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
 Frame = -3

Query: 996 RRNRSPVXXXXXXXXXRIEQWNREKEEADSGSKVDNSNYNDERNNGERDNGFAPSGGAYS 817
           RRN+SPV         +IEQWNRE+++A++G+K  N+  ND+RN+    NG A +   Y 
Sbjct: 253 RRNKSPVREGSAERRAKIEQWNRERDQAETGNKSANNYSNDDRNSDGNGNGNAHNKEQYY 312

Query: 816 DPQQQ*QS----GEYNN 778
           +P QQ Q+    G Y+N
Sbjct: 313 EPHQQRQNVPDDGGYSN 329


>OMO90235.1 hypothetical protein COLO4_19287 [Corchorus olitorius]
          Length = 319

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 30/65 (46%), Positives = 39/65 (60%)
 Frame = -3

Query: 996 RRNRSPVXXXXXXXXXRIEQWNREKEEADSGSKVDNSNYNDERNNGERDNGFAPSGGAYS 817
           RRNRSPV         +IEQWNREKE+ ++ +KV+N + ND   NG   NG+  +   YS
Sbjct: 255 RRNRSPVREGSEERRAKIEQWNREKEQGENANKVNNDSSNDNNENG--SNGYVQNDDKYS 312

Query: 816 DPQQQ 802
             QQQ
Sbjct: 313 GNQQQ 317


>XP_008241308.1 PREDICTED: splicing factor U2af small subunit B-like [Prunus mume]
          Length = 329

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
 Frame = -3

Query: 996 RRNRSP-VXXXXXXXXXRIEQWNREKEEADSGSKVDNSNYNDERNNGERDNGFAP-SGGA 823
           +RNRSP           +IEQWNRE+E+ DSGSK DN+N N+  NN +  NG+A  S   
Sbjct: 262 KRNRSPPARESSAERRAKIEQWNREREQVDSGSKYDNNNNNN--NNDDEWNGYAENSDQY 319

Query: 822 YSDPQQQ*Q 796
           Y DPQQQ Q
Sbjct: 320 YEDPQQQQQ 328


>OMO58324.1 Zinc finger, CCCH-type [Corchorus capsularis]
          Length = 321

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 30/65 (46%), Positives = 39/65 (60%)
 Frame = -3

Query: 996 RRNRSPVXXXXXXXXXRIEQWNREKEEADSGSKVDNSNYNDERNNGERDNGFAPSGGAYS 817
           RRNRSPV         +IEQWNREKE+ ++ +KV+N + ND   NG   NG+  +   YS
Sbjct: 257 RRNRSPVREGSEERRAKIEQWNREKEQRENDTKVNNDSSNDNNENG--SNGYVQNDDKYS 314

Query: 816 DPQQQ 802
             QQQ
Sbjct: 315 GYQQQ 319


>XP_006381324.1 hypothetical protein POPTR_0006s11790g [Populus trichocarpa]
           ERP59121.1 hypothetical protein POPTR_0006s11790g
           [Populus trichocarpa]
          Length = 311

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 29/63 (46%), Positives = 39/63 (61%)
 Frame = -3

Query: 996 RRNRSPVXXXXXXXXXRIEQWNREKEEADSGSKVDNSNYNDERNNGERDNGFAPSGGAYS 817
           RRNRSPV         +IE+WNREKE+ DSG + D+ N  ++R+N +    FA +GG Y 
Sbjct: 252 RRNRSPVRESSAERRAKIEKWNREKEQTDSGGRGDSRNPENDRDNSD----FAENGGHYD 307

Query: 816 DPQ 808
           D Q
Sbjct: 308 DAQ 310


Top