BLASTX nr result
ID: Phellodendron21_contig00014158
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00014158
(1769 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006425357.1 hypothetical protein CICLE_v10024686mg [Citrus cl... 1027 0.0
XP_006467030.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1026 0.0
XP_006467027.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1026 0.0
XP_011022252.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1007 0.0
XP_006383037.1 DNA-directed RNA polymerase II largest subunit fa... 1005 0.0
KDO71361.1 hypothetical protein CISIN_1g000235mg [Citrus sinensis] 1001 0.0
GAV78585.1 RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1... 1000 0.0
OAY60934.1 hypothetical protein MANES_01G151000 [Manihot esculen... 995 0.0
XP_018807320.1 PREDICTED: DNA-directed RNA polymerase II subunit... 995 0.0
XP_012491472.1 PREDICTED: DNA-directed RNA polymerase II subunit... 994 0.0
KJB43259.1 hypothetical protein B456_007G190500 [Gossypium raimo... 994 0.0
XP_012491467.1 PREDICTED: DNA-directed RNA polymerase II subunit... 994 0.0
KRH28857.1 hypothetical protein GLYMA_11G081200 [Glycine max] 994 0.0
XP_006590737.1 PREDICTED: DNA-directed RNA polymerase II subunit... 994 0.0
XP_016696697.1 PREDICTED: DNA-directed RNA polymerase II subunit... 993 0.0
XP_003517152.1 PREDICTED: DNA-directed RNA polymerase II subunit... 992 0.0
OMO55766.1 RNA polymerase II, heptapeptide repeat, eukaryotic [C... 991 0.0
OMO83437.1 RNA polymerase II, heptapeptide repeat, eukaryotic [C... 991 0.0
KYP66634.1 DNA-directed RNA polymerase II subunit RPB1 [Cajanus ... 991 0.0
XP_007046584.2 PREDICTED: DNA-directed RNA polymerase II subunit... 990 0.0
>XP_006425357.1 hypothetical protein CICLE_v10024686mg [Citrus clementina] ESR38597.1
hypothetical protein CICLE_v10024686mg [Citrus
clementina]
Length = 1860
Score = 1027 bits (2656), Expect = 0.0
Identities = 504/518 (97%), Positives = 509/518 (98%)
Frame = -2
Query: 1555 MDTRFPYSPAEVAKVRLVQFGILSPDEIRQMSVIQIEHGETTERGKPKPGGLSDPRLGTI 1376
MDTRFPYSPAEVAKVR+VQFGILSPDEIRQMSV+QIEHGETTERGKPKPGGLSDPRLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 1375 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRSVCFNCSKILADEEDHK 1196
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRSVCFNCSKILADE+DHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120
Query: 1195 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKRKGGCGAQQPKLTI 1016
FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKK+KGGCGAQQPKLTI
Sbjct: 121 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKKKGGCGAQQPKLTI 180
Query: 1015 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 836
EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVL VLKRISDEDCQLLGLNPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240
Query: 835 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 656
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 655 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 476
EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 475 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 296
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 295 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 116
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 115 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 2
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 518
>XP_006467030.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X4
[Citrus sinensis]
Length = 1853
Score = 1026 bits (2654), Expect = 0.0
Identities = 504/518 (97%), Positives = 508/518 (98%)
Frame = -2
Query: 1555 MDTRFPYSPAEVAKVRLVQFGILSPDEIRQMSVIQIEHGETTERGKPKPGGLSDPRLGTI 1376
MDTRFPYSPAEVAKVR+VQFGILSPDEIRQMSV+QIEHGETTERGKPKPGGLSDPRLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 1375 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRSVCFNCSKILADEEDHK 1196
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRSVCFNCSKILADE+DHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120
Query: 1195 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKRKGGCGAQQPKLTI 1016
FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKK KGGCGAQQPKLTI
Sbjct: 121 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180
Query: 1015 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 836
EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVL VLKRISDEDCQLLGLNPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240
Query: 835 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 656
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 655 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 476
EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 475 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 296
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 295 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 116
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 115 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 2
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 518
>XP_006467027.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X2
[Citrus sinensis] XP_006467028.1 PREDICTED: DNA-directed
RNA polymerase II subunit 1 isoform X3 [Citrus sinensis]
XP_015380807.1 PREDICTED: DNA-directed RNA polymerase II
subunit 1 isoform X1 [Citrus sinensis]
Length = 1860
Score = 1026 bits (2654), Expect = 0.0
Identities = 504/518 (97%), Positives = 508/518 (98%)
Frame = -2
Query: 1555 MDTRFPYSPAEVAKVRLVQFGILSPDEIRQMSVIQIEHGETTERGKPKPGGLSDPRLGTI 1376
MDTRFPYSPAEVAKVR+VQFGILSPDEIRQMSV+QIEHGETTERGKPKPGGLSDPRLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 1375 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRSVCFNCSKILADEEDHK 1196
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRSVCFNCSKILADE+DHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120
Query: 1195 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKRKGGCGAQQPKLTI 1016
FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKK KGGCGAQQPKLTI
Sbjct: 121 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180
Query: 1015 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 836
EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVL VLKRISDEDCQLLGLNPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240
Query: 835 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 656
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 655 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 476
EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 475 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 296
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 295 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 116
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 115 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 2
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 518
>XP_011022252.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Populus
euphratica]
Length = 1837
Score = 1007 bits (2604), Expect = 0.0
Identities = 494/518 (95%), Positives = 504/518 (97%)
Frame = -2
Query: 1555 MDTRFPYSPAEVAKVRLVQFGILSPDEIRQMSVIQIEHGETTERGKPKPGGLSDPRLGTI 1376
MDTRFPYSPAEVAKVR+VQFGILSPDEIRQMSVIQIEH ETTERGKPKPGGLSDPRLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVIQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 1375 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRSVCFNCSKILADEEDHK 1196
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMR VCFNCSKILADEEDHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 1195 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKRKGGCGAQQPKLTI 1016
FKQALKI+NPK+RLKKILDACKNKTKCEGGDEIDV GQD EEP+KK +GGCGAQQPKLTI
Sbjct: 121 FKQALKIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQDNEEPVKKSRGGCGAQQPKLTI 180
Query: 1015 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 836
EGMKMIAEYK QRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGL+PKYAR
Sbjct: 181 EGMKMIAEYKVQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLDPKYAR 240
Query: 835 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 656
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQER+GAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERSGAPAHIIS 300
Query: 655 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 476
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 475 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 296
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 295 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 116
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 115 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 2
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 518
>XP_006383037.1 DNA-directed RNA polymerase II largest subunit family protein
[Populus trichocarpa] ERP60834.1 DNA-directed RNA
polymerase II largest subunit family protein [Populus
trichocarpa]
Length = 1837
Score = 1005 bits (2599), Expect = 0.0
Identities = 493/518 (95%), Positives = 504/518 (97%)
Frame = -2
Query: 1555 MDTRFPYSPAEVAKVRLVQFGILSPDEIRQMSVIQIEHGETTERGKPKPGGLSDPRLGTI 1376
MDTRFPYSPAEVAKVR+VQFGILSPDEIRQMSVIQIEH ETTERGKPKPGGLSDPRLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVIQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 1375 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRSVCFNCSKILADEEDHK 1196
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMR VCFNCSKILADEEDHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 1195 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKRKGGCGAQQPKLTI 1016
FKQALKI+NPK+RLKKILDACKNKTKCEGGDEIDV GQD EEP+KK +GGCGAQQPKLTI
Sbjct: 121 FKQALKIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQDNEEPVKKSRGGCGAQQPKLTI 180
Query: 1015 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 836
EGMKMIAEYK QRKK+DDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGL+PKYAR
Sbjct: 181 EGMKMIAEYKVQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLDPKYAR 240
Query: 835 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 656
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQER+GAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERSGAPAHIIS 300
Query: 655 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 476
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 475 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 296
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 295 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 116
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 115 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 2
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 518
>KDO71361.1 hypothetical protein CISIN_1g000235mg [Citrus sinensis]
Length = 1815
Score = 1001 bits (2588), Expect = 0.0
Identities = 493/518 (95%), Positives = 497/518 (95%)
Frame = -2
Query: 1555 MDTRFPYSPAEVAKVRLVQFGILSPDEIRQMSVIQIEHGETTERGKPKPGGLSDPRLGTI 1376
MDTRFPYSPAEVAKVR+VQFGILSPDEIRQMSV+QIEHGETTERGKPKPGGLSDPRLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 1375 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRSVCFNCSKILADEEDHK 1196
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRSVCFNCSKILADE+DHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120
Query: 1195 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKRKGGCGAQQPKLTI 1016
FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKK KGGCGAQQPKLTI
Sbjct: 121 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180
Query: 1015 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 836
EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVL VLKRISDEDCQLLGLNPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240
Query: 835 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 656
PDWMILQVL R DDLTHQLAMIIRHNENLRRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPV----------RPSDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 290
Query: 655 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 476
EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 291 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 350
Query: 475 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 296
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 351 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 410
Query: 295 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 116
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 411 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 470
Query: 115 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 2
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM
Sbjct: 471 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 508
>GAV78585.1 RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1_3
domain-containing protein/RNA_pol_Rpb1_7
domain-containing protein/RNA_pol_Rpb1_6
domain-containing protein/RNA_pol_Rpb1_1
domain-containing protein/RNA_pol_Rpb1_5
domain-containing protein/RNA_pol_Rpb1_4
domain-containing protein/RNA_pol_Rpb1_R
domain-containing protein [Cephalotus follicularis]
Length = 1840
Score = 1000 bits (2585), Expect = 0.0
Identities = 488/518 (94%), Positives = 502/518 (96%)
Frame = -2
Query: 1555 MDTRFPYSPAEVAKVRLVQFGILSPDEIRQMSVIQIEHGETTERGKPKPGGLSDPRLGTI 1376
MD RFPYSPAEVAKVR+VQFGILSPDEIRQMSV+ IEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHSETTERGKPKTGGLSDPRLGTI 60
Query: 1375 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRSVCFNCSKILADEEDHK 1196
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRS+CFNCSKILADEEDHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSICFNCSKILADEEDHK 120
Query: 1195 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKRKGGCGAQQPKLTI 1016
FKQALKI+NPKNRLKKILDACKNKTKCEGGDEIDV GQD EEP+KK +GGCGAQQPKLTI
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLTI 180
Query: 1015 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 836
EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVL++LKRISDEDCQLLGL+PKYAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLNILKRISDEDCQLLGLDPKYAR 240
Query: 835 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 656
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLR+QERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRKQERNGSPAHIIS 300
Query: 655 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 476
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 475 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 296
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 295 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 116
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 115 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 2
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 518
>OAY60934.1 hypothetical protein MANES_01G151000 [Manihot esculenta] OAY60935.1
hypothetical protein MANES_01G151000 [Manihot esculenta]
Length = 1858
Score = 995 bits (2573), Expect = 0.0
Identities = 486/518 (93%), Positives = 499/518 (96%)
Frame = -2
Query: 1555 MDTRFPYSPAEVAKVRLVQFGILSPDEIRQMSVIQIEHGETTERGKPKPGGLSDPRLGTI 1376
MD RFPYSPAEVAKVR+VQFGI+ PDEIRQMSV+QIEH ETTERGKPKPGGLSDP+LGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGIIGPDEIRQMSVVQIEHSETTERGKPKPGGLSDPKLGTI 60
Query: 1375 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRSVCFNCSKILADEEDHK 1196
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMR VCFNCSKILADEEDHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 1195 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKRKGGCGAQQPKLTI 1016
FKQALKIRNPKNRLKKILDA KNK KCEGGDEIDV GQD EEP+KK +GGCGAQQPKLTI
Sbjct: 121 FKQALKIRNPKNRLKKILDASKNKAKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLTI 180
Query: 1015 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 836
EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAE+VLSVLKRISDEDCQLLG NPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAEKVLSVLKRISDEDCQLLGFNPKYAR 240
Query: 835 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 656
PDWMILQVL PSVMMDTSSRSEDDLTHQLAM+IRHNENL++QER GAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRHNENLKKQERGGAPAHIIS 300
Query: 655 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 476
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 475 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 296
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 295 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 116
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 115 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 2
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 518
>XP_018807320.1 PREDICTED: DNA-directed RNA polymerase II subunit 1, partial [Juglans
regia]
Length = 1671
Score = 995 bits (2572), Expect = 0.0
Identities = 487/518 (94%), Positives = 500/518 (96%)
Frame = -2
Query: 1555 MDTRFPYSPAEVAKVRLVQFGILSPDEIRQMSVIQIEHGETTERGKPKPGGLSDPRLGTI 1376
MD RFPYSPAEVAKVR+VQFGILSPDEIRQMSV+QIEH ET ERGKPK GLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETMERGKPKIAGLSDPRLGTI 60
Query: 1375 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRSVCFNCSKILADEEDHK 1196
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMR VCFNCSKILADEEDHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 1195 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKRKGGCGAQQPKLTI 1016
FKQALKI+NPKNRLKKILDACKNKTKCEGGDE++V GQD EEP+KK +GGCGAQQPKLTI
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDELEVQGQDSEEPVKKSRGGCGAQQPKLTI 180
Query: 1015 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 836
EGMKMIAEYKAQRKK+DDQEQLPEPVERKQTLTAERVL+VLKRISDEDCQLLGLNPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLNVLKRISDEDCQLLGLNPKYAR 240
Query: 835 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 656
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLR+QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 300
Query: 655 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 476
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 475 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 296
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 295 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 116
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 115 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 2
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 518
>XP_012491472.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X2
[Gossypium raimondii]
Length = 1832
Score = 994 bits (2570), Expect = 0.0
Identities = 487/518 (94%), Positives = 499/518 (96%)
Frame = -2
Query: 1555 MDTRFPYSPAEVAKVRLVQFGILSPDEIRQMSVIQIEHGETTERGKPKPGGLSDPRLGTI 1376
MD RFPYSPAEVAKVR+VQFGILSPDEIRQMSV+QIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 1375 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRSVCFNCSKILADEEDHK 1196
DRK+KCETCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMR VCFNCSKILADEEDHK
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 1195 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKRKGGCGAQQPKLTI 1016
FKQALKI+NPKNRLKKILDACKNKTKCEGGDEIDV GQD EEP+KK +GGCGAQQPKLTI
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDAEEPVKKSRGGCGAQQPKLTI 180
Query: 1015 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 836
+GMKMIAEYKAQRKKNDD EQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR
Sbjct: 181 DGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240
Query: 835 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 656
PDWMILQVL PSVMMDTSSRSEDDLTH LAMIIRHNENLRRQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300
Query: 655 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 476
EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 475 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 296
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 295 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 116
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480
Query: 115 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 2
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 518
>KJB43259.1 hypothetical protein B456_007G190500 [Gossypium raimondii]
Length = 1809
Score = 994 bits (2570), Expect = 0.0
Identities = 487/518 (94%), Positives = 499/518 (96%)
Frame = -2
Query: 1555 MDTRFPYSPAEVAKVRLVQFGILSPDEIRQMSVIQIEHGETTERGKPKPGGLSDPRLGTI 1376
MD RFPYSPAEVAKVR+VQFGILSPDEIRQMSV+QIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 1375 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRSVCFNCSKILADEEDHK 1196
DRK+KCETCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMR VCFNCSKILADEEDHK
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 1195 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKRKGGCGAQQPKLTI 1016
FKQALKI+NPKNRLKKILDACKNKTKCEGGDEIDV GQD EEP+KK +GGCGAQQPKLTI
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDAEEPVKKSRGGCGAQQPKLTI 180
Query: 1015 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 836
+GMKMIAEYKAQRKKNDD EQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR
Sbjct: 181 DGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240
Query: 835 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 656
PDWMILQVL PSVMMDTSSRSEDDLTH LAMIIRHNENLRRQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300
Query: 655 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 476
EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 475 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 296
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 295 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 116
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480
Query: 115 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 2
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 518
>XP_012491467.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii] XP_012491468.1 PREDICTED:
DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii] XP_012491470.1 PREDICTED:
DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii] XP_012491471.1 PREDICTED:
DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii] KJB43255.1 hypothetical protein
B456_007G190500 [Gossypium raimondii] KJB43256.1
hypothetical protein B456_007G190500 [Gossypium
raimondii] KJB43258.1 hypothetical protein
B456_007G190500 [Gossypium raimondii]
Length = 1846
Score = 994 bits (2570), Expect = 0.0
Identities = 487/518 (94%), Positives = 499/518 (96%)
Frame = -2
Query: 1555 MDTRFPYSPAEVAKVRLVQFGILSPDEIRQMSVIQIEHGETTERGKPKPGGLSDPRLGTI 1376
MD RFPYSPAEVAKVR+VQFGILSPDEIRQMSV+QIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 1375 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRSVCFNCSKILADEEDHK 1196
DRK+KCETCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMR VCFNCSKILADEEDHK
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 1195 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKRKGGCGAQQPKLTI 1016
FKQALKI+NPKNRLKKILDACKNKTKCEGGDEIDV GQD EEP+KK +GGCGAQQPKLTI
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDAEEPVKKSRGGCGAQQPKLTI 180
Query: 1015 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 836
+GMKMIAEYKAQRKKNDD EQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR
Sbjct: 181 DGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240
Query: 835 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 656
PDWMILQVL PSVMMDTSSRSEDDLTH LAMIIRHNENLRRQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300
Query: 655 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 476
EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 475 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 296
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 295 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 116
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480
Query: 115 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 2
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 518
>KRH28857.1 hypothetical protein GLYMA_11G081200 [Glycine max]
Length = 1803
Score = 994 bits (2569), Expect = 0.0
Identities = 485/518 (93%), Positives = 502/518 (96%)
Frame = -2
Query: 1555 MDTRFPYSPAEVAKVRLVQFGILSPDEIRQMSVIQIEHGETTERGKPKPGGLSDPRLGTI 1376
MD RFP+SPAEVAKVR+VQFGILSPDEIRQMSV+QIEHGETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 1375 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRSVCFNCSKILADEEDHK 1196
DRK+KCETCTA+MAECPGHFGHLELAKPMFHIGFLKTVL+IMR VCFNCSKILADE DHK
Sbjct: 61 DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120
Query: 1195 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKRKGGCGAQQPKLTI 1016
FKQAL+IRNPKNRLKKILDACKNK+KCEGGDEID+PGQD +EP+KK +GGCGAQQPK+TI
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITI 180
Query: 1015 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 836
EGMKMIAEYKAQRKK+DDQEQLPEPVERKQTL+AERVL VLKRISDEDCQLLGLNPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240
Query: 835 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 656
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300
Query: 655 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 476
EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 475 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 296
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 295 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 116
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 115 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 2
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 518
>XP_006590737.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Glycine max]
KRH28855.1 hypothetical protein GLYMA_11G081200 [Glycine
max] KRH28856.1 hypothetical protein GLYMA_11G081200
[Glycine max]
Length = 1827
Score = 994 bits (2569), Expect = 0.0
Identities = 485/518 (93%), Positives = 502/518 (96%)
Frame = -2
Query: 1555 MDTRFPYSPAEVAKVRLVQFGILSPDEIRQMSVIQIEHGETTERGKPKPGGLSDPRLGTI 1376
MD RFP+SPAEVAKVR+VQFGILSPDEIRQMSV+QIEHGETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 1375 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRSVCFNCSKILADEEDHK 1196
DRK+KCETCTA+MAECPGHFGHLELAKPMFHIGFLKTVL+IMR VCFNCSKILADE DHK
Sbjct: 61 DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120
Query: 1195 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKRKGGCGAQQPKLTI 1016
FKQAL+IRNPKNRLKKILDACKNK+KCEGGDEID+PGQD +EP+KK +GGCGAQQPK+TI
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITI 180
Query: 1015 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 836
EGMKMIAEYKAQRKK+DDQEQLPEPVERKQTL+AERVL VLKRISDEDCQLLGLNPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240
Query: 835 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 656
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300
Query: 655 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 476
EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 475 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 296
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 295 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 116
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 115 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 2
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 518
>XP_016696697.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Gossypium
hirsutum]
Length = 1839
Score = 993 bits (2567), Expect = 0.0
Identities = 487/518 (94%), Positives = 499/518 (96%)
Frame = -2
Query: 1555 MDTRFPYSPAEVAKVRLVQFGILSPDEIRQMSVIQIEHGETTERGKPKPGGLSDPRLGTI 1376
MD RFPYSPAEVAKVR+VQFGILSPDEIRQMSV+QIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 1375 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRSVCFNCSKILADEEDHK 1196
DRK+KCETCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMR VCFNCSKILADEEDHK
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 1195 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKRKGGCGAQQPKLTI 1016
FKQALKI+NPKNRLKKILDACKNKTKCEGGDEIDV GQD EEP+KK +GGCGAQQPKLTI
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDVEEPVKKSRGGCGAQQPKLTI 180
Query: 1015 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 836
+GMKMIAEYKAQRKKNDD EQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR
Sbjct: 181 DGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240
Query: 835 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 656
PDWMILQVL PSVMMDTSSRSEDDLTH LAMIIRHNENLRRQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300
Query: 655 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 476
EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 475 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 296
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 295 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 116
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480
Query: 115 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 2
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 518
>XP_003517152.1 PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Glycine
max] XP_006573537.1 PREDICTED: DNA-directed RNA
polymerase II subunit 1-like [Glycine max] KRH76591.1
hypothetical protein GLYMA_01G162200 [Glycine max]
KRH76592.1 hypothetical protein GLYMA_01G162200 [Glycine
max]
Length = 1827
Score = 992 bits (2564), Expect = 0.0
Identities = 485/518 (93%), Positives = 501/518 (96%)
Frame = -2
Query: 1555 MDTRFPYSPAEVAKVRLVQFGILSPDEIRQMSVIQIEHGETTERGKPKPGGLSDPRLGTI 1376
MD RFP+SPAEVAKVR+VQFGILSPDEIRQMSV+QIEHGETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 1375 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRSVCFNCSKILADEEDHK 1196
DRK+KCETCTA+MAECPGHFGHLELAKPMFHIGFLKTVL+IMR VCFNCSKILADE DHK
Sbjct: 61 DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120
Query: 1195 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKRKGGCGAQQPKLTI 1016
FKQAL+IRNPKNRLKKILDACKNK+KCEGGDEID+PGQD EE +KK +GGCGAQQPK+TI
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTEESVKKSRGGCGAQQPKITI 180
Query: 1015 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 836
EGMKMIAEYKAQRKK+DDQEQLPEPVERKQTL+AERVL VLKRISDEDCQLLGLNPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240
Query: 835 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 656
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300
Query: 655 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 476
EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 475 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 296
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 295 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 116
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 115 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 2
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 518
>OMO55766.1 RNA polymerase II, heptapeptide repeat, eukaryotic [Corchorus
capsularis]
Length = 2132
Score = 991 bits (2562), Expect = 0.0
Identities = 486/518 (93%), Positives = 498/518 (96%)
Frame = -2
Query: 1555 MDTRFPYSPAEVAKVRLVQFGILSPDEIRQMSVIQIEHGETTERGKPKPGGLSDPRLGTI 1376
MD RFPYSPAEVAKVR VQFGILSPDEIRQMSV+QIEH ETTERGKPK GLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETTERGKPKVAGLSDPRLGTI 60
Query: 1375 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRSVCFNCSKILADEEDHK 1196
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMR VCFNCSKILADEEDHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 1195 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKRKGGCGAQQPKLTI 1016
FKQALKI+NPKNRLKKILDACKNKTKCEGGDEIDV GQD EEP+KK +GGCGAQQPKL+I
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180
Query: 1015 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 836
+GMKMIAEYKAQRK+NDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR
Sbjct: 181 DGMKMIAEYKAQRKRNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240
Query: 835 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 656
PDWMILQVL PSVMMDTSSRSEDDLTH LAMIIRHNENLRRQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300
Query: 655 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 476
EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 475 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 296
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 295 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 116
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480
Query: 115 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 2
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 518
>OMO83437.1 RNA polymerase II, heptapeptide repeat, eukaryotic [Corchorus
olitorius]
Length = 1859
Score = 991 bits (2561), Expect = 0.0
Identities = 486/518 (93%), Positives = 498/518 (96%)
Frame = -2
Query: 1555 MDTRFPYSPAEVAKVRLVQFGILSPDEIRQMSVIQIEHGETTERGKPKPGGLSDPRLGTI 1376
MD RFPYSPAEVAKVR VQFGILSPDEIRQMSV+QIEH ETTERGKPK GLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETTERGKPKVAGLSDPRLGTI 60
Query: 1375 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRSVCFNCSKILADEEDHK 1196
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRSVCFNCSKILADEEDHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEEDHK 120
Query: 1195 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKRKGGCGAQQPKLTI 1016
FKQALKI+NPKNRLKKILDACKNKTKCEGGDEIDV GQD EEP+KK +GGCGAQQPKL+I
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180
Query: 1015 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 836
+GMKMIAEYKAQRK+ DDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR
Sbjct: 181 DGMKMIAEYKAQRKRTDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240
Query: 835 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 656
PDWMILQVL PSVMMDTSSRSEDDLTH LAMIIRHNENLRRQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300
Query: 655 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 476
EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 475 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 296
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 295 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 116
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480
Query: 115 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 2
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 518
>KYP66634.1 DNA-directed RNA polymerase II subunit RPB1 [Cajanus cajan]
Length = 1327
Score = 991 bits (2561), Expect = 0.0
Identities = 487/520 (93%), Positives = 502/520 (96%), Gaps = 2/520 (0%)
Frame = -2
Query: 1555 MDTRFPYSPAEVAKVRLVQFGILSPDEIRQMSVIQIEHGETTERGKPKPGGLSDPRLGTI 1376
MD RFP+SPAEVAKVR+VQFGILSPDEIRQMSV+QIEHGETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKIGGLSDPRLGTI 60
Query: 1375 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRSVCFNCSKILADEEDHK 1196
DRKMKCETCTA+MAECPGHFGHLELAKPMFHIGFLKTVL+IMR VCFNCSKILADE DHK
Sbjct: 61 DRKMKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120
Query: 1195 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKRKGGCGAQQPKLTI 1016
FKQAL+IRNPKNRLKKILDACKNK+KCEGGDEID+PGQD EEP+KK +GGCGAQQPK+TI
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTEEPVKKSRGGCGAQQPKITI 180
Query: 1015 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 836
EGMKMIAEYKAQRKK+DDQEQLPEPVERKQTL+AERVL VLKRISDEDCQLLGLNPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240
Query: 835 PDWMILQVLXXXXXXXXPSVMMDTSSRSE--DDLTHQLAMIIRHNENLRRQERNGAPAHI 662
PDWMILQVL PSVMMDTSSRSE DDLTHQLAMIIRHNENL+RQERNG+PAHI
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEASDDLTHQLAMIIRHNENLKRQERNGSPAHI 300
Query: 661 ISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFS 482
ISEFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFS
Sbjct: 301 ISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFS 360
Query: 481 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 302
ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI
Sbjct: 361 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 420
Query: 301 IRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 122
IRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY
Sbjct: 421 IRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 480
Query: 121 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 2
STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM
Sbjct: 481 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 520
>XP_007046584.2 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Theobroma cacao]
Length = 1861
Score = 990 bits (2560), Expect = 0.0
Identities = 484/518 (93%), Positives = 500/518 (96%)
Frame = -2
Query: 1555 MDTRFPYSPAEVAKVRLVQFGILSPDEIRQMSVIQIEHGETTERGKPKPGGLSDPRLGTI 1376
MD RFPYSPAEVAKVR+VQFGILSPDEIRQMSV+QIEHGETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 1375 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRSVCFNCSKILADEEDHK 1196
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMR VCFNCSKILADEE+HK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHK 120
Query: 1195 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKRKGGCGAQQPKLTI 1016
FKQALKI+NPKNRLKKILDACKNK+KCEGGDEIDV GQD EEP+KK +GGCGAQQPKL+I
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180
Query: 1015 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 836
+GMKMIAEYK QRK+NDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPK+AR
Sbjct: 181 DGMKMIAEYKPQRKRNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKFAR 240
Query: 835 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 656
PDWMILQVL PSVMMDTSSRSEDDLTH LAMIIRHNENLRRQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300
Query: 655 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 476
EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 475 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 296
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 295 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 116
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480
Query: 115 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 2
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 518