BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00013388
         (3767 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006494587.1 PREDICTED: pentatricopeptide repeat-containing pr...  1649   0.0  
XP_006494588.1 PREDICTED: pentatricopeptide repeat-containing pr...  1412   0.0  
KDO42798.1 hypothetical protein CISIN_1g005129mg [Citrus sinensi...  1268   0.0  
EOX97788.1 Pentatricopeptide repeat-containing protein, putative...  1264   0.0  
XP_007041957.2 PREDICTED: pentatricopeptide repeat-containing pr...  1263   0.0  
XP_006423563.1 hypothetical protein CICLE_v10027915mg [Citrus cl...  1259   0.0  
OMO74434.1 hypothetical protein CCACVL1_16728 [Corchorus capsula...  1229   0.0  
XP_002276432.2 PREDICTED: pentatricopeptide repeat-containing pr...  1224   0.0  
XP_002306163.2 hypothetical protein POPTR_0004s17400g [Populus t...  1219   0.0  
XP_012442072.1 PREDICTED: pentatricopeptide repeat-containing pr...  1209   0.0  
XP_017619314.1 PREDICTED: pentatricopeptide repeat-containing pr...  1207   0.0  
OMO92877.1 hypothetical protein COLO4_17237 [Corchorus olitorius]    1206   0.0  
XP_016674532.1 PREDICTED: pentatricopeptide repeat-containing pr...  1206   0.0  
XP_016705784.1 PREDICTED: pentatricopeptide repeat-containing pr...  1205   0.0  
XP_011037246.1 PREDICTED: pentatricopeptide repeat-containing pr...  1205   0.0  
XP_012084399.1 PREDICTED: pentatricopeptide repeat-containing pr...  1205   0.0  
XP_002534048.1 PREDICTED: pentatricopeptide repeat-containing pr...  1201   0.0  
XP_012442074.1 PREDICTED: pentatricopeptide repeat-containing pr...  1200   0.0  
XP_011037244.1 PREDICTED: pentatricopeptide repeat-containing pr...  1199   0.0  
XP_017619315.1 PREDICTED: pentatricopeptide repeat-containing pr...  1198   0.0  

>XP_006494587.1 PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X1 [Citrus sinensis]
          Length = 1072

 Score = 1649 bits (4271), Expect = 0.0
 Identities = 865/1087 (79%), Positives = 942/1087 (86%), Gaps = 14/1087 (1%)
 Frame = -2

Query: 3664 MDINIFSPKSQTLALITC--TPPLLTW-----SLQSIRREFV--RPQSRT-RRKCKKLGL 3515
            MDI+IFSPKSQ L L T   +PP LTW     SL  IRR+F+  RPQ+   RRKC  LGL
Sbjct: 1    MDISIFSPKSQALTLTTTCSSPPPLTWLNPSSSLHPIRRQFLLLRPQTPPPRRKCNSLGL 60

Query: 3514 L-HTRSSQFLVKASFNPPPNSLLIAVFVTLATFTAVSVACLNHFLKNRNKTTSRQVSGSE 3338
            L HTRS QFLVKAS   PPNS+LIAV V LATF A S+A LNHFL+NR K +S+QVS S+
Sbjct: 61   LLHTRSPQFLVKASLRSPPNSVLIAVIVALATFAAFSLAYLNHFLQNRRKNSSKQVSDSK 120

Query: 3337 NHALRQLSNDTNQIVDPDDLSLRSSSGGNENLI-EIEG-NQVSEERTAQETIVLHDGPQL 3164
                RQL +D    +  + + +R SSG NE+L+ EI G NQVSEERT QET  + D   L
Sbjct: 121  IRGTRQLGSDAVDDIIENQI-VRISSGENESLMMEIGGSNQVSEERTEQETTFVPDCTYL 179

Query: 3163 TETSISIGADSFVSPQQECPPFMLSDSGIMQPLIFATEMSELQLGKEQKETKSDFELPGA 2984
            TETS+SIG DSFVSPQ ECPPFMLSDSG +QP  FATEMSELQLGKE+K+          
Sbjct: 180  TETSVSIGTDSFVSPQ-ECPPFMLSDSGGVQPHSFATEMSELQLGKEKKD---------- 228

Query: 2983 IVIVKSCDSWVLENDAHAEESEPTIN-GALTEAVREEQYVYLGANQSVPKSPANLEVVKA 2807
               ++SC+S VLENDAHAE S PT++ G LTE+VREEQ+    A+QSV KSPANLE VKA
Sbjct: 229  ---IESCESSVLENDAHAEVSVPTVSYGVLTESVREEQFACGRASQSVLKSPANLEFVKA 285

Query: 2806 ISSHASPLNSFSLFSLKRDSELKGTDLSMQQSLQTAEHVEGKILLACHKEDSSHKSKVTR 2627
            ISSHASPLN +SL SLKRD+E KG +LS+Q++LQTAEHVEGKI LACH+E  SHK K  R
Sbjct: 286  ISSHASPLNGYSLSSLKRDTEPKGPELSLQEALQTAEHVEGKIRLACHREGPSHKIKARR 345

Query: 2626 RGRSFPRNKERRHQMQDDSKNILQFPYPNGKQANDEDDASEQFRSYNRLIRNGRLTDCID 2447
            R R+FPRN ER + MQD  KN+LQFPYPNGK AN   D SEQ  SYNRLIR GR++DCID
Sbjct: 346  RIRNFPRNNERINLMQDVGKNMLQFPYPNGKHANYAHDVSEQLHSYNRLIRQGRISDCID 405

Query: 2446 LLEDMERKGLLDMNQVYHARFFNVCKSQKAIKEAFRFSKLVPNPTLSTFNMLMSVCASSK 2267
            LLEDMERKGLLDM++VYHARFFNVCKSQKAIKEAFRF KLVPNPTLSTFNMLMSVCASSK
Sbjct: 406  LLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCASSK 465

Query: 2266 DSEGAFQVLQLVREAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYG 2087
            DSEGAFQVL+LV+EAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAG+EPNVHTYG
Sbjct: 466  DSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYG 525

Query: 2086 ALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVIFNALITACGLSGAVDRAFDVLAEMNAE 1907
            ALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRV+FNALITACG SGAVDRAFDVLAEMNAE
Sbjct: 526  ALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAE 585

Query: 1906 VHPIDPDHITIGALIKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAVNCCSQTGDWE 1727
            VHP+DPDHITIGAL+KACANAGQVDRAREVYKMIHKYNIKGTPEVYTIA+NCCSQTGDWE
Sbjct: 586  VHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWE 645

Query: 1726 FACSVYDDMTKKGVVPDEVFLSALIDFAGHAGKVDAAFEILQEAKNQGIRVGIIAYSSLM 1547
            FACSVYDDMTKKGV+PDEVFLSALIDFAGHAGKV+AAFEILQEAKNQGI VGII+YSSLM
Sbjct: 646  FACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLM 705

Query: 1546 GACSNAKNWQMALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKSMEVLSDMKRLGLR 1367
            GACSNAKNWQ ALELYEHMKSIKLKPTVSTMNALITALCDGD+LPK+MEVLSDMK LGL 
Sbjct: 706  GACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDRLPKTMEVLSDMKSLGLC 765

Query: 1366 LNTITFSILLVASERKDDVEVGLMLLSQAKEDGVTPSLIMFKCIIGMCLRRYEKARTLGE 1187
             NTIT+SILLVA ERKDDVEVGLMLLSQAKEDGV P+L+MFKCIIGMC RRYEKARTL E
Sbjct: 766  PNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEKARTLNE 825

Query: 1186 HVLSFNSGRPQIENKWTSLALMVYREAIVAGTLPTMEVVSQVLGCLQLPYNADIRDRLVE 1007
            HVLSFNSGRPQIENKWTSL LMVYREAIVAGT+PT+EVVS+VLGCLQLPYNADIR+RLVE
Sbjct: 826  HVLSFNSGRPQIENKWTSLVLMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVE 885

Query: 1006 NLGVNADSVRRSNLCSLIDGFGEYDPRAFSLLEEAASLGIVPCVSFKESPVVVDARKLEN 827
            NLGV+AD+++RSNLCSLIDGFGEYDPRAFSLLEEAAS GIVPCVSFKESPVVVDARKLE 
Sbjct: 886  NLGVSADALKRSNLCSLIDGFGEYDPRAFSLLEEAASFGIVPCVSFKESPVVVDARKLEI 945

Query: 826  HTATVYLLTVLKGLKHRLAAGAKLPTVTLLLPVKKMQIMSVGEEKTINLAERTSQXXXXX 647
            HTA VYLLT+LKGL+HRLAAGAKLP V +LLPV+K QIMSVG EKTI++AERT+Q     
Sbjct: 946  HTAKVYLLTILKGLRHRLAAGAKLPNVNILLPVEKTQIMSVGGEKTIDIAERTTQAIAAL 1005

Query: 646  XXXXXXAYQGNESFGKIRINGLALKRWFQPKLASPFSGKPGELSTLQLGKVITHQQRNIR 467
                   YQGN S+GKIRINGLALKRWFQPKLASPFSGKPGELS+LQLGK ITHQQRNIR
Sbjct: 1006 LRRLGLPYQGNGSYGKIRINGLALKRWFQPKLASPFSGKPGELSSLQLGKFITHQQRNIR 1065

Query: 466  TGNLSLE 446
            TGNLSLE
Sbjct: 1066 TGNLSLE 1072


>XP_006494588.1 PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X2 [Citrus sinensis]
          Length = 923

 Score = 1412 bits (3654), Expect = 0.0
 Identities = 742/938 (79%), Positives = 811/938 (86%), Gaps = 14/938 (1%)
 Frame = -2

Query: 3664 MDINIFSPKSQTLALITC--TPPLLTW-----SLQSIRREFV--RPQSRT-RRKCKKLGL 3515
            MDI+IFSPKSQ L L T   +PP LTW     SL  IRR+F+  RPQ+   RRKC  LGL
Sbjct: 1    MDISIFSPKSQALTLTTTCSSPPPLTWLNPSSSLHPIRRQFLLLRPQTPPPRRKCNSLGL 60

Query: 3514 L-HTRSSQFLVKASFNPPPNSLLIAVFVTLATFTAVSVACLNHFLKNRNKTTSRQVSGSE 3338
            L HTRS QFLVKAS   PPNS+LIAV V LATF A S+A LNHFL+NR K +S+QVS S+
Sbjct: 61   LLHTRSPQFLVKASLRSPPNSVLIAVIVALATFAAFSLAYLNHFLQNRRKNSSKQVSDSK 120

Query: 3337 NHALRQLSNDTNQIVDPDDLSLRSSSGGNENLI-EIEG-NQVSEERTAQETIVLHDGPQL 3164
                RQL +D    +  + + +R SSG NE+L+ EI G NQVSEERT QET  + D   L
Sbjct: 121  IRGTRQLGSDAVDDIIENQI-VRISSGENESLMMEIGGSNQVSEERTEQETTFVPDCTYL 179

Query: 3163 TETSISIGADSFVSPQQECPPFMLSDSGIMQPLIFATEMSELQLGKEQKETKSDFELPGA 2984
            TETS+SIG DSFVSPQ ECPPFMLSDSG +QP  FATEMSELQLGKE+K+          
Sbjct: 180  TETSVSIGTDSFVSPQ-ECPPFMLSDSGGVQPHSFATEMSELQLGKEKKD---------- 228

Query: 2983 IVIVKSCDSWVLENDAHAEESEPTIN-GALTEAVREEQYVYLGANQSVPKSPANLEVVKA 2807
               ++SC+S VLENDAHAE S PT++ G LTE+VREEQ+    A+QSV KSPANLE VKA
Sbjct: 229  ---IESCESSVLENDAHAEVSVPTVSYGVLTESVREEQFACGRASQSVLKSPANLEFVKA 285

Query: 2806 ISSHASPLNSFSLFSLKRDSELKGTDLSMQQSLQTAEHVEGKILLACHKEDSSHKSKVTR 2627
            ISSHASPLN +SL SLKRD+E KG +LS+Q++LQTAEHVEGKI LACH+E  SHK K  R
Sbjct: 286  ISSHASPLNGYSLSSLKRDTEPKGPELSLQEALQTAEHVEGKIRLACHREGPSHKIKARR 345

Query: 2626 RGRSFPRNKERRHQMQDDSKNILQFPYPNGKQANDEDDASEQFRSYNRLIRNGRLTDCID 2447
            R R+FPRN ER + MQD  KN+LQFPYPNGK AN   D SEQ  SYNRLIR GR++DCID
Sbjct: 346  RIRNFPRNNERINLMQDVGKNMLQFPYPNGKHANYAHDVSEQLHSYNRLIRQGRISDCID 405

Query: 2446 LLEDMERKGLLDMNQVYHARFFNVCKSQKAIKEAFRFSKLVPNPTLSTFNMLMSVCASSK 2267
            LLEDMERKGLLDM++VYHARFFNVCKSQKAIKEAFRF KLVPNPTLSTFNMLMSVCASSK
Sbjct: 406  LLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCASSK 465

Query: 2266 DSEGAFQVLQLVREAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYG 2087
            DSEGAFQVL+LV+EAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAG+EPNVHTYG
Sbjct: 466  DSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYG 525

Query: 2086 ALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVIFNALITACGLSGAVDRAFDVLAEMNAE 1907
            ALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRV+FNALITACG SGAVDRAFDVLAEMNAE
Sbjct: 526  ALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAE 585

Query: 1906 VHPIDPDHITIGALIKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAVNCCSQTGDWE 1727
            VHP+DPDHITIGAL+KACANAGQVDRAREVYKMIHKYNIKGTPEVYTIA+NCCSQTGDWE
Sbjct: 586  VHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWE 645

Query: 1726 FACSVYDDMTKKGVVPDEVFLSALIDFAGHAGKVDAAFEILQEAKNQGIRVGIIAYSSLM 1547
            FACSVYDDMTKKGV+PDEVFLSALIDFAGHAGKV+AAFEILQEAKNQGI VGII+YSSLM
Sbjct: 646  FACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLM 705

Query: 1546 GACSNAKNWQMALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKSMEVLSDMKRLGLR 1367
            GACSNAKNWQ ALELYEHMKSIKLKPTVSTMNALITALCDGD+LPK+MEVLSDMK LGL 
Sbjct: 706  GACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDRLPKTMEVLSDMKSLGLC 765

Query: 1366 LNTITFSILLVASERKDDVEVGLMLLSQAKEDGVTPSLIMFKCIIGMCLRRYEKARTLGE 1187
             NTIT+SILLVA ERKDDVEVGLMLLSQAKEDGV P+L+MFKCIIGMC RRYEKARTL E
Sbjct: 766  PNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEKARTLNE 825

Query: 1186 HVLSFNSGRPQIENKWTSLALMVYREAIVAGTLPTMEVVSQVLGCLQLPYNADIRDRLVE 1007
            HVLSFNSGRPQIENKWTSL LMVYREAIVAGT+PT+EVVS+VLGCLQLPYNADIR+RLVE
Sbjct: 826  HVLSFNSGRPQIENKWTSLVLMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVE 885

Query: 1006 NLGVNADSVRRSNLCSLIDGFGEYDPRAFSLLEEAASL 893
            NLGV+AD+++RSNLCSLIDGFGEYDPRAFSLLE   +L
Sbjct: 886  NLGVSADALKRSNLCSLIDGFGEYDPRAFSLLEIVLNL 923


>KDO42798.1 hypothetical protein CISIN_1g005129mg [Citrus sinensis] KDO42799.1
            hypothetical protein CISIN_1g005129mg [Citrus sinensis]
            KDO42800.1 hypothetical protein CISIN_1g005129mg [Citrus
            sinensis]
          Length = 713

 Score = 1268 bits (3282), Expect = 0.0
 Identities = 633/713 (88%), Positives = 670/713 (93%)
 Frame = -2

Query: 2584 MQDDSKNILQFPYPNGKQANDEDDASEQFRSYNRLIRNGRLTDCIDLLEDMERKGLLDMN 2405
            MQD  KN+LQFPYPNGK AN   D SEQ  SYNRLIR GR+++CIDLLEDMERKGLLDM+
Sbjct: 1    MQDGGKNMLQFPYPNGKHANYAHDVSEQLHSYNRLIRQGRISECIDLLEDMERKGLLDMD 60

Query: 2404 QVYHARFFNVCKSQKAIKEAFRFSKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLQLVRE 2225
            +VYHARFFNVCKSQKAIKEAFRF KLVPNPTLSTFNMLMSVCASSKDSEGAFQVL+LV+E
Sbjct: 61   KVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQE 120

Query: 2224 AGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAK 2045
            AGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAG+EPNVHTYGALIDGCAKAGQVAK
Sbjct: 121  AGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAK 180

Query: 2044 AFGAYGIMRSKNVKPDRVIFNALITACGLSGAVDRAFDVLAEMNAEVHPIDPDHITIGAL 1865
            AFGAYGIMRSKNVKPDRV+FNALITACG SGAVDRAFDVLAEMNAEVHP+DPDHITIGAL
Sbjct: 181  AFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGAL 240

Query: 1864 IKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAVNCCSQTGDWEFACSVYDDMTKKGV 1685
            +KACANAGQVDRAREVYKMIHKYNIKGTPEVYTIA+NCCSQTGDWEFACSVYDDMTKKGV
Sbjct: 241  MKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGV 300

Query: 1684 VPDEVFLSALIDFAGHAGKVDAAFEILQEAKNQGIRVGIIAYSSLMGACSNAKNWQMALE 1505
            +PDEVFLSALIDFAGHAGKV+AAFEILQEAKNQGI VGII+YSSLMGACSNAKNWQ ALE
Sbjct: 301  IPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALE 360

Query: 1504 LYEHMKSIKLKPTVSTMNALITALCDGDQLPKSMEVLSDMKRLGLRLNTITFSILLVASE 1325
            LYEHMKSIKLKPTVSTMNALITALCDGDQLPK+MEVLSDMK LGL  NTIT+SILLVA E
Sbjct: 361  LYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACE 420

Query: 1324 RKDDVEVGLMLLSQAKEDGVTPSLIMFKCIIGMCLRRYEKARTLGEHVLSFNSGRPQIEN 1145
            RKDDVEVGLMLLSQAKEDGV P+L+MFKCIIGMC RRYEKARTL EHVLSFNSGRPQIEN
Sbjct: 421  RKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEKARTLNEHVLSFNSGRPQIEN 480

Query: 1144 KWTSLALMVYREAIVAGTLPTMEVVSQVLGCLQLPYNADIRDRLVENLGVNADSVRRSNL 965
            KWTSLALMVYREAIVAGT+PT+EVVS+VLGCLQLPYNADIR+RLVENLGV+AD+++RSNL
Sbjct: 481  KWTSLALMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVENLGVSADALKRSNL 540

Query: 964  CSLIDGFGEYDPRAFSLLEEAASLGIVPCVSFKESPVVVDARKLENHTATVYLLTVLKGL 785
            CSLIDGFGEYDPRAFSLLEEAAS GIVPCVSFKE PVVVDARKLE HTA VYLLT+LKGL
Sbjct: 541  CSLIDGFGEYDPRAFSLLEEAASFGIVPCVSFKEIPVVVDARKLEIHTAKVYLLTILKGL 600

Query: 784  KHRLAAGAKLPTVTLLLPVKKMQIMSVGEEKTINLAERTSQXXXXXXXXXXXAYQGNESF 605
            +HRLAAGAKLP V +LLPV+K QIMSVG EKTI++AERT+Q            YQGN S+
Sbjct: 601  RHRLAAGAKLPNVNILLPVEKTQIMSVGGEKTIDIAERTTQAIAALLRRLGLPYQGNGSY 660

Query: 604  GKIRINGLALKRWFQPKLASPFSGKPGELSTLQLGKVITHQQRNIRTGNLSLE 446
            GKIRINGLALKRWFQPKLASPFSGKPGELS+LQLGK ITHQQRNIRTGNLSLE
Sbjct: 661  GKIRINGLALKRWFQPKLASPFSGKPGELSSLQLGKFITHQQRNIRTGNLSLE 713


>EOX97788.1 Pentatricopeptide repeat-containing protein, putative [Theobroma
            cacao]
          Length = 1110

 Score = 1264 bits (3271), Expect = 0.0
 Identities = 678/1116 (60%), Positives = 830/1116 (74%), Gaps = 43/1116 (3%)
 Frame = -2

Query: 3664 MDIN--IFSPKSQTLALITCTPPLLTWSLQSIRREFV------RPQ---SRTRRKCKKLG 3518
            MD N   FS K QT      +P     +   I R+F+      RP    S  R+K K LG
Sbjct: 1    MDSNTVFFSSKFQTPTRPPSSPLRSCTNRPLISRQFLGFNHTLRPPGGASSLRKKNKTLG 60

Query: 3517 LLHTRSSQFLVKASFNPPPNSLLIAVFVTLATFTAVSVACLNHFLKNRNKTTSRQVSGSE 3338
             L   S +F+V+AS +    S L+ V + +   +A+S+AC N F   R   +S+ VSGS 
Sbjct: 61   FLRLHSPRFIVRASID----SNLVLVVIGVTALSALSLACYNRFF--RKIGSSKTVSGSS 114

Query: 3337 NHALRQ--------LSNDTNQIVDPDDLSLRSSSGGNENLIEI--EGNQVSEERTA---- 3200
            + AL Q        +    +Q++D  DL   + + G ++L E   E    SE + A    
Sbjct: 115  HSALPQQRLGKDGAVQTAESQVLDIGDLKKENFAKGKDDLKEEIKEATYASESKEALLQF 174

Query: 3199 QETIVLHDGPQLTETSISIGADSFV-------------SPQQECPPFMLSDSGIMQPLIF 3059
            QET V +D   L +TS S GAD                +     PP +L +SG ++PL+F
Sbjct: 175  QETTVANDDSLLHKTSDSSGADCLAVTANGFDVSEESGATDLPLPPTVLLESGAVEPLMF 234

Query: 3058 ATEMSELQLGKEQKETKSDFELPGAIVIVKSCDSWVLENDAHAEESEPTIN---GALTEA 2888
            A EMSEL L + ++  + + +LP   V  +S  S VL  DAH    E  +        E+
Sbjct: 235  AAEMSELHLEEVERVNEFEADLPRLAVEPESSASSVLVKDAHVLVGEGEVTRHYDIFKES 294

Query: 2887 VREEQYVYLGANQSVPKSPANLEVVKAISSHASPLNSFSLFSLKRDSELKGTDLSMQQSL 2708
            VREE + +  A+Q V KS  NL  +K  SS     NS S  SL ++SELK   LS +  L
Sbjct: 295  VREELHTFYEADQLVAKSSTNLNGLKPASSRVFSPNSNSFSSLMQNSELKRAQLSSKNCL 354

Query: 2707 QTAEHVEGKILLACHKEDSSHKSKVTRRGRSFPRNKERRHQMQDDSKNILQFPYPNGKQA 2528
            QTA+  EGK+  AC    SSHK +   RGR  PR+K +RH +Q+ +  + +FP+PNG  A
Sbjct: 355  QTADMAEGKVAQACSNRVSSHKRQDFGRGREIPRDKGKRHSIQEKNTKLPKFPFPNGMLA 414

Query: 2527 NDEDDASEQFRSYNRLIRNGRLTDCIDLLEDMERKGLLDMNQVYHARFFNVCKSQKAIKE 2348
            +++    + FRSYNRL+R+GRL+DC+DLLEDME++GLLDMN+VYHA+FF +C  QKA+KE
Sbjct: 415  DNKHRPEDHFRSYNRLLRDGRLSDCVDLLEDMEQRGLLDMNKVYHAKFFKICNRQKAVKE 474

Query: 2347 AFRFSKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLQLVREAGLKADCKLYTTLITTCAK 2168
            AF F+KL+PNPTLSTFNMLMSVCASS+DS+GAF+VL++V+EAG KADCKLYTTLI+TCAK
Sbjct: 475  AFCFTKLIPNPTLSTFNMLMSVCASSQDSDGAFEVLRIVQEAGFKADCKLYTTLISTCAK 534

Query: 2167 SGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVI 1988
            SGKVD MFEVFHEMVN+GVEPNV+TYGALIDGCA+AGQVAKAFGAYGIMRSKNVKPDRV+
Sbjct: 535  SGKVDTMFEVFHEMVNSGVEPNVNTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVV 594

Query: 1987 FNALITACGLSGAVDRAFDVLAEMNAEVHPIDPDHITIGALIKACANAGQVDRAREVYKM 1808
            FNALITACG SGAVDRAFDVLAEM AE  PIDPDH+T+GALIKAC+NA QVDRAREVYKM
Sbjct: 595  FNALITACGQSGAVDRAFDVLAEMMAETQPIDPDHVTVGALIKACSNADQVDRAREVYKM 654

Query: 1807 IHKYNIKGTPEVYTIAVNCCSQTGDWEFACSVYDDMTKKGVVPDEVFLSALIDFAGHAGK 1628
            IH+++IKGTPEVYTIAVNCCSQTGDWEFACSVY DM  KGV PDEVF+SALID AGHAGK
Sbjct: 655  IHEFSIKGTPEVYTIAVNCCSQTGDWEFACSVYSDMKGKGVAPDEVFISALIDVAGHAGK 714

Query: 1627 VDAAFEILQEAKNQGIRVGIIAYSSLMGACSNAKNWQMALELYEHMKSIKLKPTVSTMNA 1448
            +DAAFEIL+EAKNQGI VGI++YSSLMGACSNA+NWQ ALELYE++K++KL  TVST+NA
Sbjct: 715  LDAAFEILEEAKNQGINVGIVSYSSLMGACSNARNWQKALELYENIKAVKLNLTVSTVNA 774

Query: 1447 LITALCDGDQLPKSMEVLSDMKRLGLRLNTITFSILLVASERKDDVEVGLMLLSQAKEDG 1268
            LIT+LC+ DQLPK+ME+LS+M+ LGL  NT+T+SILLVASERKDD+EVGLMLLSQA++DG
Sbjct: 775  LITSLCEADQLPKAMEILSEMEELGLCPNTVTYSILLVASERKDDLEVGLMLLSQARKDG 834

Query: 1267 VTPSLIMFKCIIGMCLRRYEKARTLGEHVLSFNSGRPQIENKWTSLALMVYREAIVAGTL 1088
            V P+LIM +CIIGMCLRR+EKA  +GE VLSFNSG+P IENKWTS+AL VYRE IVAGT 
Sbjct: 835  VAPNLIMARCIIGMCLRRFEKACKVGEPVLSFNSGQPHIENKWTSVALAVYRETIVAGTA 894

Query: 1087 PTMEVVSQVLGCLQLPYNADIRDRLVENLGVNADSVRRSNLCSLIDGFGEYDPRAFSLLE 908
            PTM+V+SQ+LGCLQLP +  ++ RLVENL V+AD+ R S+L SLIDGFGEYDPRAFSLLE
Sbjct: 895  PTMDVISQILGCLQLPRDDSLKSRLVENLDVSADATRCSSLSSLIDGFGEYDPRAFSLLE 954

Query: 907  EAASLGIVPCVSFKESPVVVDARKLENHTATVYLLTVLKGLKHRLAAGAKLPTVTLLLPV 728
            EAAS GIVPCVSFKESP+VVDAR+L+ + A VYLLT+LKGLKHR AAGAKLP++++LLP+
Sbjct: 955  EAASFGIVPCVSFKESPIVVDARELQINMAEVYLLTILKGLKHRRAAGAKLPSISVLLPL 1014

Query: 727  KKMQIMSVGEEKTINLAERTSQXXXXXXXXXXXAYQGNESFGKIRINGLALKRWFQPKLA 548
            +K Q+++   EK+INLA R  Q            YQGNESFGKIRINGLALKRWFQPKLA
Sbjct: 1015 EKTQVLTPEREKSINLAGRIGQAIAALLRRIGLPYQGNESFGKIRINGLALKRWFQPKLA 1074

Query: 547  SPFSGKPGE--LSTLQLGKVITHQQRNIRTGNLSLE 446
            SPF+GKPGE   S ++LGK I+HQQRNIRTGNLSL+
Sbjct: 1075 SPFTGKPGEWNASQMRLGKGISHQQRNIRTGNLSLD 1110


>XP_007041957.2 PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic [Theobroma cacao]
          Length = 1110

 Score = 1263 bits (3269), Expect = 0.0
 Identities = 678/1116 (60%), Positives = 829/1116 (74%), Gaps = 43/1116 (3%)
 Frame = -2

Query: 3664 MDIN--IFSPKSQTLALITCTPPLLTWSLQSIRREFV------RPQ---SRTRRKCKKLG 3518
            MD N   FS K QT      +P     +   I R+F+      RP    S  R+K K LG
Sbjct: 1    MDSNTVFFSSKFQTPTRPPSSPLRSCTNRPLISRQFLGFNHTLRPPGGASSLRKKNKTLG 60

Query: 3517 LLHTRSSQFLVKASFNPPPNSLLIAVFVTLATFTAVSVACLNHFLKNRNKTTSRQVSGSE 3338
             L   S +F+V+AS +    S L+ V + +   +A+S+AC N F   R   +S+ VSGS 
Sbjct: 61   FLRLHSPRFIVRASID----SNLVLVVIGVTALSALSLACYNRFF--RKIGSSKTVSGSS 114

Query: 3337 NHALRQ--------LSNDTNQIVDPDDLSLRSSSGGNENLIEI--EGNQVSEERTA---- 3200
            + AL Q        +    +Q++D  DL   + + G ++L E   E    SE + A    
Sbjct: 115  HSALPQQRLGKDGAVQTAESQVLDIGDLKKENFAKGKDDLKEEIKEATYASESKEALLQF 174

Query: 3199 QETIVLHDGPQLTETSISIGADSFV-------------SPQQECPPFMLSDSGIMQPLIF 3059
            QET V +D   L +TS S GAD                +     PP +L +SG ++PL+F
Sbjct: 175  QETTVANDDSLLHKTSDSSGADCLAVTANGFDVSEESGTTDLPLPPTVLLESGAVEPLMF 234

Query: 3058 ATEMSELQLGKEQKETKSDFELPGAIVIVKSCDSWVLENDAHAEESEPTIN---GALTEA 2888
            A EMSEL L + ++  + + +LP   V  +S  S VL  DAH    E  +        E+
Sbjct: 235  AAEMSELHLEEVERVNEFEADLPRLAVEPESSASSVLVKDAHVLVGEGEVTRHYDIFKES 294

Query: 2887 VREEQYVYLGANQSVPKSPANLEVVKAISSHASPLNSFSLFSLKRDSELKGTDLSMQQSL 2708
            VREE + +  A+Q V KS  NL  +K  SS     NS S  SL ++SELK   LS +  L
Sbjct: 295  VREELHTFYEADQLVAKSSTNLNGLKPASSRVFSPNSNSFSSLMQNSELKRAQLSSKNCL 354

Query: 2707 QTAEHVEGKILLACHKEDSSHKSKVTRRGRSFPRNKERRHQMQDDSKNILQFPYPNGKQA 2528
            QTA+  EGK+  AC    SSHK +   RGR  PR+K +RH +Q+    + +FP+PNG  A
Sbjct: 355  QTADMAEGKVAQACSNRVSSHKRQDFGRGREIPRDKGKRHSIQEKDTKLPKFPFPNGMLA 414

Query: 2527 NDEDDASEQFRSYNRLIRNGRLTDCIDLLEDMERKGLLDMNQVYHARFFNVCKSQKAIKE 2348
            +++    + FRSYNRL+R+GRL+DC+DLLEDME++GLLDMN+VYHA+FF +C  QKA+KE
Sbjct: 415  DNKHRPEDHFRSYNRLLRDGRLSDCVDLLEDMEQRGLLDMNKVYHAKFFKICNRQKAVKE 474

Query: 2347 AFRFSKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLQLVREAGLKADCKLYTTLITTCAK 2168
            AF F+KL+PNPTLSTFNMLMSVCASS+DS+GAF+VL++V+EAG KADCKLYTTLI+TCAK
Sbjct: 475  AFCFTKLIPNPTLSTFNMLMSVCASSQDSDGAFEVLRIVQEAGFKADCKLYTTLISTCAK 534

Query: 2167 SGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVI 1988
            SGKVD MFEVFHEMVN+GVEPNV+TYGALIDGCA+AGQVAKAFGAYGIMRSKNVKPDRV+
Sbjct: 535  SGKVDTMFEVFHEMVNSGVEPNVNTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVV 594

Query: 1987 FNALITACGLSGAVDRAFDVLAEMNAEVHPIDPDHITIGALIKACANAGQVDRAREVYKM 1808
            FNALITACG SGAVDRAFDVLAEM AE  PIDPDH+T+GALIKAC+NA QVDRAREVYKM
Sbjct: 595  FNALITACGQSGAVDRAFDVLAEMMAETQPIDPDHVTVGALIKACSNADQVDRAREVYKM 654

Query: 1807 IHKYNIKGTPEVYTIAVNCCSQTGDWEFACSVYDDMTKKGVVPDEVFLSALIDFAGHAGK 1628
            IH+++IKGTPEVYTIAVNCCSQTGDWEFACSVY DM  KGV PDEVF+SALID AGHAGK
Sbjct: 655  IHEFSIKGTPEVYTIAVNCCSQTGDWEFACSVYSDMKGKGVAPDEVFISALIDVAGHAGK 714

Query: 1627 VDAAFEILQEAKNQGIRVGIIAYSSLMGACSNAKNWQMALELYEHMKSIKLKPTVSTMNA 1448
            +DAAFEIL+EAKNQGI VGI++YSSLMGACSNA+NWQ ALELYE++K++KL  TVST+NA
Sbjct: 715  LDAAFEILEEAKNQGINVGIVSYSSLMGACSNARNWQKALELYENIKAVKLNLTVSTVNA 774

Query: 1447 LITALCDGDQLPKSMEVLSDMKRLGLRLNTITFSILLVASERKDDVEVGLMLLSQAKEDG 1268
            LIT+LC+ DQLPK+ME+LS+M+ LGL  NT+T+SILLVASERKDD+EVGLMLLSQA++DG
Sbjct: 775  LITSLCEADQLPKAMEILSEMEELGLCPNTVTYSILLVASERKDDLEVGLMLLSQARKDG 834

Query: 1267 VTPSLIMFKCIIGMCLRRYEKARTLGEHVLSFNSGRPQIENKWTSLALMVYREAIVAGTL 1088
            V P+LIM +CIIGMCLRR+EKA  +GE VLSFNSG+P IENKWTS+AL VYRE IVAGT 
Sbjct: 835  VAPNLIMARCIIGMCLRRFEKACKVGEPVLSFNSGQPHIENKWTSVALAVYRETIVAGTA 894

Query: 1087 PTMEVVSQVLGCLQLPYNADIRDRLVENLGVNADSVRRSNLCSLIDGFGEYDPRAFSLLE 908
            PTM+V+SQ+LGCLQLP +  ++ RLVENL V+AD+ R S+L SLIDGFGEYDPRAFSLLE
Sbjct: 895  PTMDVISQILGCLQLPRDDSLKSRLVENLEVSADATRCSSLSSLIDGFGEYDPRAFSLLE 954

Query: 907  EAASLGIVPCVSFKESPVVVDARKLENHTATVYLLTVLKGLKHRLAAGAKLPTVTLLLPV 728
            EAAS GIVPCVSFKESP+VVDAR+L+ + A VYLLT+LKGLKHR AAGAKLP++++LLP+
Sbjct: 955  EAASFGIVPCVSFKESPIVVDARELQINMAEVYLLTILKGLKHRRAAGAKLPSISVLLPL 1014

Query: 727  KKMQIMSVGEEKTINLAERTSQXXXXXXXXXXXAYQGNESFGKIRINGLALKRWFQPKLA 548
            +K Q+++   EK+INLA R  Q            YQGNESFGKIRINGLALKRWFQPKLA
Sbjct: 1015 EKTQVLTPEREKSINLAGRIGQAIAALLRRIGLPYQGNESFGKIRINGLALKRWFQPKLA 1074

Query: 547  SPFSGKPGE--LSTLQLGKVITHQQRNIRTGNLSLE 446
            SPF+GKPGE   S ++LGK I+HQQRNIRTGNLSL+
Sbjct: 1075 SPFTGKPGEWNASQMRLGKGISHQQRNIRTGNLSLD 1110


>XP_006423563.1 hypothetical protein CICLE_v10027915mg [Citrus clementina] ESR36803.1
            hypothetical protein CICLE_v10027915mg [Citrus
            clementina]
          Length = 713

 Score = 1259 bits (3259), Expect = 0.0
 Identities = 630/713 (88%), Positives = 667/713 (93%)
 Frame = -2

Query: 2584 MQDDSKNILQFPYPNGKQANDEDDASEQFRSYNRLIRNGRLTDCIDLLEDMERKGLLDMN 2405
            MQD  KN+LQFPYPNGK AN   D SEQ  SYNRLIR GR+++CIDLLEDMERKGLLDM+
Sbjct: 1    MQDGGKNMLQFPYPNGKHANYAHDVSEQLHSYNRLIRQGRISECIDLLEDMERKGLLDMD 60

Query: 2404 QVYHARFFNVCKSQKAIKEAFRFSKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLQLVRE 2225
            +VYHARFFNVCKSQKAIKEAF F KLVPNPTLSTFNMLMSVCASSKDSEGAFQVL+LV+E
Sbjct: 61   KVYHARFFNVCKSQKAIKEAFCFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQE 120

Query: 2224 AGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAK 2045
            AGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAG+EPNVHTYGALIDGCAKAGQVAK
Sbjct: 121  AGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAK 180

Query: 2044 AFGAYGIMRSKNVKPDRVIFNALITACGLSGAVDRAFDVLAEMNAEVHPIDPDHITIGAL 1865
            AFGAYGIMRSKNVKPDRV+FNALITACG SGAVDRAFDVLAEMNAEVHP+DPDHITIGAL
Sbjct: 181  AFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGAL 240

Query: 1864 IKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAVNCCSQTGDWEFACSVYDDMTKKGV 1685
            +KACANAGQVDRAREVYKMIHKYNIKGTPEVYTIA+NCCSQTGDWEFACSVYDDMTKKGV
Sbjct: 241  MKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGV 300

Query: 1684 VPDEVFLSALIDFAGHAGKVDAAFEILQEAKNQGIRVGIIAYSSLMGACSNAKNWQMALE 1505
            +PDEVFLSALIDFAGHAGKV+AAFEILQEAKNQGI VGII+YSSLMGACSNAKNWQ ALE
Sbjct: 301  IPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALE 360

Query: 1504 LYEHMKSIKLKPTVSTMNALITALCDGDQLPKSMEVLSDMKRLGLRLNTITFSILLVASE 1325
            LYEHMKSIKLKPTVSTMNALITALCDGDQLPK+MEVLSDMK LGL  NTIT+SILLVA E
Sbjct: 361  LYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACE 420

Query: 1324 RKDDVEVGLMLLSQAKEDGVTPSLIMFKCIIGMCLRRYEKARTLGEHVLSFNSGRPQIEN 1145
            RKDDVEVGLMLLSQAKEDGV P+L+MFKCIIGMC RRYEKARTL EHVLSFNSGRPQIEN
Sbjct: 421  RKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEKARTLNEHVLSFNSGRPQIEN 480

Query: 1144 KWTSLALMVYREAIVAGTLPTMEVVSQVLGCLQLPYNADIRDRLVENLGVNADSVRRSNL 965
            KWTSLALMVYREAIVAGT+PT+EVVS+VLGCLQLPYNADIR+RLVENLGV+AD+++RSNL
Sbjct: 481  KWTSLALMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVENLGVSADALKRSNL 540

Query: 964  CSLIDGFGEYDPRAFSLLEEAASLGIVPCVSFKESPVVVDARKLENHTATVYLLTVLKGL 785
            CSLIDGFGEYDPRAFSLLEEAAS GIVPCVSFKE PVVVDARKLE HTA VYLLT+LKGL
Sbjct: 541  CSLIDGFGEYDPRAFSLLEEAASFGIVPCVSFKEIPVVVDARKLEIHTAKVYLLTILKGL 600

Query: 784  KHRLAAGAKLPTVTLLLPVKKMQIMSVGEEKTINLAERTSQXXXXXXXXXXXAYQGNESF 605
            +HRLAAGAKLP V +LLPV+K QI SVG EKTI++AERT+Q             QGN S+
Sbjct: 601  RHRLAAGAKLPNVNILLPVEKTQIKSVGGEKTIDIAERTTQAIAALLRRLGLPNQGNGSY 660

Query: 604  GKIRINGLALKRWFQPKLASPFSGKPGELSTLQLGKVITHQQRNIRTGNLSLE 446
            GKIRINGLALKRWFQPKLASPFSGKPGELS+LQLGK ITHQQRNIRTGNLSLE
Sbjct: 661  GKIRINGLALKRWFQPKLASPFSGKPGELSSLQLGKFITHQQRNIRTGNLSLE 713


>OMO74434.1 hypothetical protein CCACVL1_16728 [Corchorus capsularis]
          Length = 1101

 Score = 1229 bits (3179), Expect = 0.0
 Identities = 664/1069 (62%), Positives = 811/1069 (75%), Gaps = 34/1069 (3%)
 Frame = -2

Query: 3550 SRTRRKCKKLGLLHTRSSQFLVKASFNPPPNSLLIAVFVTLATFTAVSVACLNHFLKNRN 3371
            S  R+K K L  L   S +F V+AS +    S L+ V + +   +A+S+AC N F  N  
Sbjct: 48   SSLRKKHKHLAFLRLPSPRFTVRASVD----SNLVLVVIGVTALSALSLACYNRFFSNTQ 103

Query: 3370 KTTSRQVSGSENHALRQLSNDT--------NQIVDPDDLSLRSSSGGNENLIEI--EGNQ 3221
              +S++ SGS + AL    N T        +QI++  DL   + +   +NL E   E  +
Sbjct: 104  --SSKKASGSSSSALPHQKNGTVVEIQTGNSQILEIGDLQSEAFAKETDNLEEKLRENTE 161

Query: 3220 VSEERTA----QETIVLHDGPQLTETSISIGADSFV----SPQ------QECPPFM---L 3092
              E +      QET V+ +   LT+TS S GAD  V    SP          PPF    L
Sbjct: 162  AHENKEVVFQFQETTVVSEDLLLTKTSESSGADCLVFTADSPNACEESGMSDPPFQPTAL 221

Query: 3091 SDSGIMQPLIFATEMSELQLGKEQKETKSDFE--LPGAIVIVKSCDSWVLENDAHA--EE 2924
             +SG +QPLIFATEMSEL +  E+ E+ ++FE  LP   V+  S  S VLE D H   EE
Sbjct: 222  LESGPLQPLIFATEMSELHI--EEVESINEFEAGLPRIAVVPMSTASSVLEKDDHVLVEE 279

Query: 2923 SEPTIN-GALTEAVREEQYVYLGANQSVPKSPANLEVVKAISSHASPLNSFSLFSLKRDS 2747
            SE T +     E+VREE + +  A+Q +  S  NL  +K +SSH S    FS  +LK++S
Sbjct: 280  SEVTRHYNIFKESVREELHTFYEADQVLENSLTNLNGLKPVSSHVS----FS--TLKQNS 333

Query: 2746 ELKGTDLSMQQSLQTAEHVEGKILLACHKEDSSHKSKVTRRGRSFPRNKERRHQMQDDSK 2567
            E     LS + SLQTA+ VEGK+  A     S+HK K   RG  F R+KE +H +Q D+K
Sbjct: 334  ERNRAQLSSKTSLQTADMVEGKVAQAHSNRGSTHKRKDFGRGGKFQRDKENKHLIQKDTK 393

Query: 2566 NILQFPYPNGKQANDEDDASEQFRSYNRLIRNGRLTDCIDLLEDMERKGLLDMNQVYHAR 2387
             +  + +PNG  AND+    E F SYNRL+R+GRL+DC+ LLEDME+KGLLDMN+VYHA+
Sbjct: 394  -LPPYSFPNGMPANDKHHPEEHFSSYNRLLRDGRLSDCVALLEDMEQKGLLDMNKVYHAK 452

Query: 2386 FFNVCKSQKAIKEAFRFSKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLQLVREAGLKAD 2207
            FF +C  +KA++EAFRF+KL+PNPTLSTFNMLMSVCASS+DSEGAF+VL+LV+EAG KAD
Sbjct: 453  FFKICNKKKAVQEAFRFTKLIPNPTLSTFNMLMSVCASSQDSEGAFEVLRLVQEAGFKAD 512

Query: 2206 CKLYTTLITTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYG 2027
            CKLYTTLI+TCAKSGKVD MFEVFHEMVN GVEPNV+TYGALIDGCA+AGQVAKAFGAYG
Sbjct: 513  CKLYTTLISTCAKSGKVDTMFEVFHEMVNCGVEPNVNTYGALIDGCARAGQVAKAFGAYG 572

Query: 2026 IMRSKNVKPDRVIFNALITACGLSGAVDRAFDVLAEMNAEVHPIDPDHITIGALIKACAN 1847
            IMRSKNVKPDRV+FNALITACG SGAVDRAFDVLAEM AE  PI+PDHIT+GALIKAC+N
Sbjct: 573  IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMMAETQPIEPDHITVGALIKACSN 632

Query: 1846 AGQVDRAREVYKMIHKYNIKGTPEVYTIAVNCCSQTGDWEFACSVYDDMTKKGVVPDEVF 1667
            AGQVDRAREVYKMI+K++I+GTPEVYTIAVNCCSQ GDWEFAC VY+DM +KGV PDEVF
Sbjct: 633  AGQVDRAREVYKMINKFDIRGTPEVYTIAVNCCSQNGDWEFACRVYEDMKRKGVAPDEVF 692

Query: 1666 LSALIDFAGHAGKVDAAFEILQEAKNQGIRVGIIAYSSLMGACSNAKNWQMALELYEHMK 1487
            +SALID AGHAG +DAAFEI+  AKNQGI +GI++YSSLMGACSNAKNWQ ALELYE++K
Sbjct: 693  ISALIDVAGHAGNLDAAFEIVDAAKNQGINIGIVSYSSLMGACSNAKNWQKALELYENIK 752

Query: 1486 SIKLKPTVSTMNALITALCDGDQLPKSMEVLSDMKRLGLRLNTITFSILLVASERKDDVE 1307
            ++KL  TVST+NA+IT+LC+ DQLPK+MEVLS+MK LGL  NTIT+SILLVASERK+D E
Sbjct: 753  ALKLNLTVSTVNAVITSLCEADQLPKAMEVLSEMKELGLCPNTITYSILLVASERKNDFE 812

Query: 1306 VGLMLLSQAKEDGVTPSLIMFKCIIGMCLRRYEKARTLGEHVLSFNSGRPQIENKWTSLA 1127
            VGLMLLSQA++DGV P+L+M +CIIG CLRR++KA  +GE V+SFNSGRP IENKWTS+A
Sbjct: 813  VGLMLLSQARKDGVAPNLVMARCIIGTCLRRFQKACMVGEPVVSFNSGRPHIENKWTSVA 872

Query: 1126 LMVYREAIVAGTLPTMEVVSQVLGCLQLPYNADIRDRLVENLGVNADSVRRSNLCSLIDG 947
            L VYR+AIVAGT+PTMEVVSQ+LGCL+LP +  ++ RLVENL V+ADS R S+L SLIDG
Sbjct: 873  LAVYRDAIVAGTVPTMEVVSQILGCLRLPLDDSLKSRLVENLEVSADSSRYSSLSSLIDG 932

Query: 946  FGEYDPRAFSLLEEAASLGIVPCVSFKESPVVVDARKLENHTATVYLLTVLKGLKHRLAA 767
            FGEYDPRAFSLLEEAAS GIVPCVSFKESP+V+DAR+   + A VYLLT+LKGLKHRLAA
Sbjct: 933  FGEYDPRAFSLLEEAASFGIVPCVSFKESPIVIDAREFPINIAEVYLLTILKGLKHRLAA 992

Query: 766  GAKLPTVTLLLPVKKMQIMSVGEEKTINLAERTSQXXXXXXXXXXXAYQGNESFGKIRIN 587
            GA+LP+++++LP+ K +I++  +EK+INLA R  +            YQGNES+GKIRIN
Sbjct: 993  GARLPSISIVLPLVKAEILTPEKEKSINLAGRLGRAIASLLRRIGLPYQGNESYGKIRIN 1052

Query: 586  GLALKRWFQPKLASPFSGKPGE--LSTLQLGKVITHQQRNIRTGNLSLE 446
            GLAL RWFQPKLASPF+GKPGE  +S ++LGK I HQQRNIRTGNLSL+
Sbjct: 1053 GLALNRWFQPKLASPFTGKPGEWNVSQMRLGKGIFHQQRNIRTGNLSLD 1101


>XP_002276432.2 PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X1 [Vitis vinifera]
          Length = 1115

 Score = 1224 bits (3167), Expect = 0.0
 Identities = 669/1123 (59%), Positives = 816/1123 (72%), Gaps = 50/1123 (4%)
 Frame = -2

Query: 3664 MDINIFSPKSQTLALITCTP----PLLTWSLQSIRREFVR-------PQSRTRRKCKKLG 3518
            MD+N FS KSQ L LI+CTP    P  + S  ++RREF+        P  R+ +KCK + 
Sbjct: 1    MDVN-FSAKSQALTLISCTPLYSSPSPSSSFSTLRREFLGCGHNLRPPGLRSPKKCKNIR 59

Query: 3517 LLHTRSSQFLVKASFNPPPNSLLIAVFVTLATFTAVSVACLNHFLKNRNKTTSRQVSGSE 3338
                  S+F  KAS    P    + V V +A   A SV  L++   +R +  SR+VSG  
Sbjct: 60   FRIQSPSRFYFKASLGSQP----VLVVVAVAAVFAFSVVFLSY---SRRRKNSREVSGPS 112

Query: 3337 NHALRQLSNDT-NQIVDP-----DDLSLRSSSGGNENLIEI--EGNQVSEERTA--QETI 3188
              A+ QLS D  NQ ++       DL   +S   +   ++I  E +  S+++ A  QE  
Sbjct: 113  GFAISQLSRDVMNQFMESAILGFGDLHKETSEKESRATMDIVEEVSHASKDKEAPWQEIA 172

Query: 3187 VLHDGPQLTETSISIGADSFVSPQQECP-------------PFMLSDSGIMQPLIFATEM 3047
            ++ +   +T TS S   D   S  + C              P +LS+SG++QPL+FATEM
Sbjct: 173  LMQEETHVTNTSESSRLDVLSSNAKNCVSVRETEEAGPSILPPLLSESGLLQPLVFATEM 232

Query: 3046 SELQLGKEQKETKSDFELPGAIVIVKSCDSWVLENDA-------------HAEESEP-TI 2909
             ELQL + Q ET+  ++L   +V  KS  + V +  A               EESE  + 
Sbjct: 233  PELQLEERQMETEFGYDLSTPVVQTKSIAASVPDIIALEGVNERKNRGGRPGEESEIISF 292

Query: 2908 NGALTEAVREEQYVYLGANQSVPKSPANLEVVKAISSHASPLNSFSLFSLKRDSELKGTD 2729
             G   + +REE Y +  A QSV K   N   +K ++S+AS L+   +    R++  K  +
Sbjct: 293  TGIFRDTIREELYTFYEAKQSVMKPMPNFNGIKTLASNASLLDGNGVSFQMRNATSKEAE 352

Query: 2728 LSMQQSLQTAEHVEGKILLACHKEDSSHKSKVTRRGRSFPRNKERRHQMQDDSKNILQFP 2549
            LS Q S  +A++VEGK+ L+C+KE SS K     +G+ FPR+K  R     D +N+ QFP
Sbjct: 353  LSAQNSHSSADYVEGKMSLSCYKEGSSGKRNDLVKGKGFPRDKNGRLPPLSDHRNLSQFP 412

Query: 2548 YPNGKQANDEDDASEQFRSYNRLIRNGRLTDCIDLLEDMERKGLLDMNQVYHARFFNVCK 2369
              NG    ++   SE+F +YNRL+  GRL+DCI LLEDME+ GLLDM++VYHA+FF +C+
Sbjct: 413  LSNGMTVKEKYHDSEKFSAYNRLLSEGRLSDCIQLLEDMEKMGLLDMDKVYHAKFFKICR 472

Query: 2368 SQKAIKEAFRFSKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLQLVREAGLKADCKLYTT 2189
            SQKA+ EAFRF+KL+P PTLSTFNMLMSVCA+S+DS GAFQVLQLVREAGLKADCKLYTT
Sbjct: 473  SQKAVTEAFRFAKLIPTPTLSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTT 532

Query: 2188 LITTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKN 2009
            LI+TCAKSGKVDAMFEVFHEMVNA VEPNVHTYGALIDGC +AGQVAKAFGAYGIMRSK 
Sbjct: 533  LISTCAKSGKVDAMFEVFHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKK 592

Query: 2008 VKPDRVIFNALITACGLSGAVDRAFDVLAEMNAEVHPIDPDHITIGALIKACANAGQVDR 1829
            V+PDRV+FNALITACG SGAVDRAFDVLAEM AE  PIDPDHIT+GALIKAC NAGQVDR
Sbjct: 593  VEPDRVVFNALITACGQSGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDR 652

Query: 1828 AREVYKMIHKYNIKGTPEVYTIAVNCCSQTGDWEFACSVYDDMTKKGVVPDEVFLSALID 1649
            AREVYKMI +YNIKGTPEVYTIAV+  SQ GDWEFA SVY DMT+KGVVPDE+FLSALID
Sbjct: 653  AREVYKMIDQYNIKGTPEVYTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALID 712

Query: 1648 FAGHAGKVDAAFEILQEAKNQGIRVGIIAYSSLMGACSNAKNWQMALELYEHMKSIKLKP 1469
             AGHAGK+DAAFE++QEA+ QGI +GI++YSSLMGACSNAKNWQ ALELY  +KS+KL P
Sbjct: 713  VAGHAGKLDAAFEVIQEARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNP 772

Query: 1468 TVSTMNALITALCDGDQLPKSMEVLSDMKRLGLRLNTITFSILLVASERKDDVEVGLMLL 1289
            TVSTMNALITALC+G+QL K+MEVLSDMKR GL  NTIT+SILLVASE+KDD++VGLM+L
Sbjct: 773  TVSTMNALITALCEGEQLEKAMEVLSDMKRAGLCPNTITYSILLVASEKKDDIDVGLMIL 832

Query: 1288 SQAKEDGVTPSLIMFKCIIGMCLRRYEKARTLGEHVLSFNSGRPQIENKWTSLALMVYRE 1109
            SQA++D V P+L+M +C++GMCLRR+EKA  LGE VLSFNSGRPQI+NKWTS ALMVYRE
Sbjct: 833  SQARKDSVAPNLVMCRCLVGMCLRRFEKACALGEPVLSFNSGRPQIDNKWTSSALMVYRE 892

Query: 1108 AIVAGTLPTMEVVSQVLGCLQLPYNADIRDRLVENLGVNADSVRRSNLCSLIDGFGEYDP 929
             + AG +PTME++SQVLGCLQ P +  +R+RL+ENLGV+AD+ RRSNLCSLIDGFGEYD 
Sbjct: 893  TVSAGVIPTMELLSQVLGCLQFPRDVSLRNRLIENLGVSADASRRSNLCSLIDGFGEYDS 952

Query: 928  RAFSLLEEAASLGIVPCVSFKESPVVVDARKLENHTATVYLLTVLKGLKHRLAAGAKLPT 749
            RAFSLLEEAASLG+V CVSFK+SPV+VD R+L+   A VYLLTVLKGLKHRLAAGAKLP+
Sbjct: 953  RAFSLLEEAASLGVVSCVSFKKSPVIVDTRRLQIRIAEVYLLTVLKGLKHRLAAGAKLPS 1012

Query: 748  VTLLLPVKKMQIMSVGEEKTINLAERTSQXXXXXXXXXXXAYQGNESFGKIRINGLALKR 569
            +T+LLP +  Q+++   EK INLA R SQ            YQGNES GKIRINGLA +R
Sbjct: 1013 MTILLPTETTQVLAPKGEKAINLAGRISQAVASMLRRLGLPYQGNESRGKIRINGLATRR 1072

Query: 568  WFQPKLASPFSGKPGELSTLQ--LGKVITHQQRNIRTGNLSLE 446
            WFQPKLA PFSGK  ELS+ Q  LG  I+ QQR IRTGNLSL+
Sbjct: 1073 WFQPKLAGPFSGKVDELSSSQSRLGTGISLQQRKIRTGNLSLD 1115


>XP_002306163.2 hypothetical protein POPTR_0004s17400g [Populus trichocarpa]
            EEE86674.2 hypothetical protein POPTR_0004s17400g
            [Populus trichocarpa]
          Length = 1104

 Score = 1219 bits (3153), Expect = 0.0
 Identities = 677/1115 (60%), Positives = 813/1115 (72%), Gaps = 50/1115 (4%)
 Frame = -2

Query: 3640 KSQTLALITCTPPLLTWSLQSIRREFV--------RPQSRT----RRKCKKLGLLHTRSS 3497
            KSQTL L   +   LT   Q   R+F+        RP S      R + +KL +    + 
Sbjct: 5    KSQTLTLTQIST--LTSINQRGHRQFIGCFGHNLIRPPSSAGLLLRYRGRKLRVQRNGNK 62

Query: 3496 QFLVKASFNPPPNSLLIAVFVTLATFTAVSVACLNHFL----KNRNKTTSR--QVSGSEN 3335
            +F+VKAS +   NS+L+ V VT   F+A+S+A  N ++    KN  K TS   QV GS +
Sbjct: 63   RFVVKASLDA--NSVLVVVAVT--AFSALSLAYYNRYINSNIKNSKKITSSSIQVLGSPS 118

Query: 3334 HALRQLSND-TNQIVDPDDL-------------SLRSSSGGNENLIEIEGNQVSEERTAQ 3197
             A  QL     NQI     L             S  S    +EN  E E  +   +   Q
Sbjct: 119  FAFSQLGRSIVNQITGSQFLHFGGLHREAREVESQGSVEKASENSHEFEEKETHVQ--FQ 176

Query: 3196 ETIVLHDGPQLTETSISIGA--------DSFVSPQQECP-------PFMLSDSGIMQPLI 3062
            ET  LH    L +   S GA        D+ V  + E         P +LS+SG   PLI
Sbjct: 177  ETASLHGSSLLIKAVESSGANFVAANVCDTVVVEESEVGDARVSPLPSVLSESGSALPLI 236

Query: 3061 FATEMSELQLGKEQKETKSDFELPGAIVIVKSCDSWVLENDAHAEESE-PTINGALTEAV 2885
            FAT+M+EL   K  +E +   EL G++  VKS    V  ++   E++E  + NGA++++V
Sbjct: 237  FATQMTELTQEKSGEEIEFGSELSGSVEKVKSNAVLVPVDNESIEKAELSSYNGAISQSV 296

Query: 2884 REEQYVYLGANQSVPKSPANLEVVKAISSHASPLNSFSLFSLKRDSELKGTDLSMQQSLQ 2705
            RE+ Y + GAN+SV KS +NL + K  SSHAS L S    SLK ++ L+  DLS QQ LQ
Sbjct: 297  REDLYTFYGANRSVVKSASNLGL-KETSSHASLLKSKRFSSLKMNTGLETEDLSSQQPLQ 355

Query: 2704 TAEHVEGKILLACHKEDSSHKSKVTRRGRSFPRNKERRHQMQDDSKNILQFPYPNGKQAN 2525
             A+HV+  +  A ++  S HKSK      + P +KER+H +QD    + Q P PNG  + 
Sbjct: 356  AADHVQKTMPPAHYEGGSFHKSK------NLPGSKERKHPIQDSHSKLRQLPSPNGIPSK 409

Query: 2524 DEDDASEQFRSYNRLIRNGRLTDCIDLLEDMERKGLLDMNQVYHARFFNVCKSQKAIKEA 2345
             +D   E++ +YNRL+R GRL +C+DLLEDMER+GLLDMN+VYH +FF +C+SQKA+KEA
Sbjct: 410  VKDHPPEEYNAYNRLLREGRLAECLDLLEDMERRGLLDMNKVYHVKFFKLCRSQKAVKEA 469

Query: 2344 FRFSKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLQLVREAGLKADCKLYTTLITTCAKS 2165
            FRF KLV NPTLSTFNMLMSVCA+S++S GAF+VLQL +  GLKADCKLYTTLI+TCAKS
Sbjct: 470  FRFCKLVQNPTLSTFNMLMSVCATSQNSAGAFEVLQLAKAVGLKADCKLYTTLISTCAKS 529

Query: 2164 GKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVIF 1985
            GKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCA+AGQVAKAFGAYGIMRSKNVKPDRV+F
Sbjct: 530  GKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVF 589

Query: 1984 NALITACGLSGAVDRAFDVLAEMNAEVHPIDPDHITIGALIKACANAGQVDRAREVYKMI 1805
            NALITACG SGAVDRAFDVLAEM  E  PIDPDHIT+GALIKAC NAGQVDRA+EVY M+
Sbjct: 590  NALITACGQSGAVDRAFDVLAEMTGEAQPIDPDHITVGALIKACTNAGQVDRAQEVYNMV 649

Query: 1804 HKYNIKGTPEVYTIAVNCCSQTGDWEFACSVYDDMTKKGVVPDEVFLSALIDFAGHAGKV 1625
            HKYNIKGTPEVYTIA+N CSQ GDWEFAC VYDDMT+KGVVPDE+FLSALID AGHAGK+
Sbjct: 650  HKYNIKGTPEVYTIAINSCSQIGDWEFACKVYDDMTRKGVVPDEMFLSALIDVAGHAGKM 709

Query: 1624 DAAFEILQEAKNQGIRVGIIAYSSLMGACSNAKNWQMALELYEHMKSIKLKPTVSTMNAL 1445
            DAAFEI+Q AK +G ++GII YSSLMGAC NAKNWQ  LELYE +KS+K+KPTV+TMNAL
Sbjct: 710  DAAFEIIQVAKAKGAQLGIIPYSSLMGACCNAKNWQKGLELYEDIKSMKIKPTVATMNAL 769

Query: 1444 ITALCDGDQLPKSMEVLSDMKRLGLRLNTITFSILLVASERKDDVEVGLMLLSQAKEDGV 1265
            ITALCDGDQLPK++EVLS+MK  GLR NTIT+SIL VASERKDD+E GLMLLSQAK+D V
Sbjct: 770  ITALCDGDQLPKALEVLSEMKAWGLRPNTITYSILSVASERKDDLEAGLMLLSQAKKDCV 829

Query: 1264 TPSLIMFKCIIGMCLRRYEKARTLGEHVLSFNSGRPQIENKWTSLALMVYREAIVAGTLP 1085
             P+LIM KCII MCLR++E A TLGE VLSFNSGR QIENKWTS+ALMVYR  + AG  P
Sbjct: 830  APTLIMSKCIISMCLRKFENACTLGEAVLSFNSGRAQIENKWTSVALMVYRGTMAAGEKP 889

Query: 1084 TMEVVSQVLGCLQLPYNADIRDRLVENLGVNADSVRRSNLCSLIDGFGEYDPRAFSLLEE 905
            T+E+VSQVLGCLQ+P +A +++RLVENLGV A S R SNLCSL+DGFGEYDPRAFSLLEE
Sbjct: 890  TIELVSQVLGCLQIPCDATLKNRLVENLGVTAVSSRYSNLCSLVDGFGEYDPRAFSLLEE 949

Query: 904  AASLGIVPCVSFKESPVVVDARKLENHTATVYLLTVLKGLKHRLAAGAKLPTVTLLLPVK 725
            AASLGIVPCVSFKESP+ +DA++L+ H A VY LT+LKGLKHRLAAGAKLP VT+LLPV+
Sbjct: 950  AASLGIVPCVSFKESPITMDAKQLQIHIAEVYFLTILKGLKHRLAAGAKLPNVTILLPVE 1009

Query: 724  KMQIMSVGEEKTINLAERTSQXXXXXXXXXXXAYQGNESFGKIRINGLALKRWFQPKLAS 545
            K Q++++  EKTIN+A R S+            YQGNES+GKIRING++L+RW QPKL S
Sbjct: 1010 KAQVITLEGEKTINVAGRISRAVASLLRRLGLPYQGNESYGKIRINGISLRRWLQPKLDS 1069

Query: 544  PFSGKPGELST--LQLGKVITHQQRNIRTGNLSLE 446
            PFSGKPGE ST   +LGK I+ QQRNIRTG+ SLE
Sbjct: 1070 PFSGKPGEWSTSLSRLGKGISFQQRNIRTGDFSLE 1104


>XP_012442072.1 PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X1 [Gossypium raimondii] KJB11195.1
            hypothetical protein B456_001G246900 [Gossypium
            raimondii]
          Length = 1106

 Score = 1209 bits (3128), Expect = 0.0
 Identities = 663/1117 (59%), Positives = 808/1117 (72%), Gaps = 45/1117 (4%)
 Frame = -2

Query: 3664 MDINIF--SPKSQTLALITCTP-------PLLTWSLQSIRREFVRP--QSRTRRKCKKLG 3518
            MD N+   SPK QT   +   P       PL++            P   S  R+K K L 
Sbjct: 1    MDSNLIFLSPKFQTPNFLPSYPFSSSTTRPLISRQFLGFTHSLWHPGGASSLRKKRKNLA 60

Query: 3517 LLHTRSSQFLVKASFNPPPNSLLIAVFVTLATFTAVSVACLNHFLKNRNKTTSRQVSGSE 3338
             L  +  +F+ +AS +    S L+ V + +   +A+S+A  N F   R   TS++VSGS 
Sbjct: 61   FLRFQPPRFVSRASID----SNLVFVVIGVTALSALSLAFYNQFF--RKSQTSKKVSGSS 114

Query: 3337 NHALRQ--------LSNDTNQIVDPDDLS----LRSSSGGNENLIEIEGNQVSEERTAQE 3194
              ALRQ        +    +QI++  DL      + + G  E++ E+     S+E   QE
Sbjct: 115  RSALRQQRQGKDVVIQTADHQILETGDLQRDTFAKENGGLTEHMKEVNDASESKEVLLQE 174

Query: 3193 TIVLHDGPQLTETSISIGAD----------------SFVSPQQECPPFMLSDSGIMQPLI 3062
            T V++    LT+ S S GAD                + V P Q   P +L +SG  QP  
Sbjct: 175  TAVVNGDSMLTKASESNGADFLAFNANDSDVLEESGTTVLPLQ---PTVLLESGAGQPFT 231

Query: 3061 FATEMSELQLGKEQKETKSDFELPGAIVIVKSCDSWVLENDAHAEESEPTING--ALTEA 2888
            FAT+ S L L +   E ++D+  P   V  KS  S VL  DA     E  +       E+
Sbjct: 232  FATQRSGLHLEERVNEFEADY--PRLAVEPKSSASSVLVEDAVVLIGEDKVRNYDIFRES 289

Query: 2887 VREEQYVYLGANQSVPKSPANLEVVKAISSH--ASPLNSFSLFSLKRDSELKGTDLSMQQ 2714
             REE + +  A+  V KS +NL  +K +SSH  +S  N FS   LK +SEL    LS + 
Sbjct: 290  GREELHTFYEADHLVAKSSSNL-TLKPVSSHFLSSNSNKFSSLKLKLNSELNKDALSAKN 348

Query: 2713 SLQTAEHVEGKILLACHKEDSSHKSKVTRRGRSFPRNKERRHQMQDDSKNILQFPYPNGK 2534
            SLQTA+ VEGK+  A  +   SHK K   RGR  PR+K ++H +Q+    + QFP+PNG+
Sbjct: 349  SLQTADMVEGKVTQANFQGGFSHKRKHLGRGRESPRDKGKKHLIQEKDTKLAQFPFPNGE 408

Query: 2533 QANDEDDASEQFRSYNRLIRNGRLTDCIDLLEDMERKGLLDMNQVYHARFFNVCKSQKAI 2354
             AND+    E    YN L+R GRL+D +DLLEDME+KGLLDM++VYHA+FF +C  QKA+
Sbjct: 409  LANDKHHPEEYLSYYNHLLRCGRLSDSVDLLEDMEQKGLLDMDKVYHAKFFKICSKQKAV 468

Query: 2353 KEAFRFSKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLQLVREAGLKADCKLYTTLITTC 2174
            KEAFRF+KL+ NPTLSTFNMLMSVC  SKDSEGAFQVL+LV+EAG +ADC LYTTLI+TC
Sbjct: 469  KEAFRFTKLIANPTLSTFNMLMSVCGCSKDSEGAFQVLRLVQEAGFQADCILYTTLISTC 528

Query: 2173 AKSGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDR 1994
            AKSGKVD MFEVFHEMVN+GVEPNV+TYGALIDGCA+AGQV KAFGAYGIMRSKNVKPDR
Sbjct: 529  AKSGKVDTMFEVFHEMVNSGVEPNVNTYGALIDGCARAGQVPKAFGAYGIMRSKNVKPDR 588

Query: 1993 VIFNALITACGLSGAVDRAFDVLAEMNAEVHPIDPDHITIGALIKACANAGQVDRAREVY 1814
            V+FNALITACG SGAVDRAFDVLAEM AE  PIDPDHIT+GALIKAC+NAGQV+RAREVY
Sbjct: 589  VVFNALITACGQSGAVDRAFDVLAEMMAETQPIDPDHITVGALIKACSNAGQVERAREVY 648

Query: 1813 KMIHKYNIKGTPEVYTIAVNCCSQTGDWEFACSVYDDMTKKGVVPDEVFLSALIDFAGHA 1634
            KM+HK+NI+GTPEVYTIAVNCCSQTGDWEFAC VY+DM KKGV PDEVF+SALID AGHA
Sbjct: 649  KMMHKFNIRGTPEVYTIAVNCCSQTGDWEFACGVYNDMKKKGVAPDEVFISALIDVAGHA 708

Query: 1633 GKVDAAFEILQEAKNQGIRVGIIAYSSLMGACSNAKNWQMALELYEHMKSIKLKPTVSTM 1454
            GK+DAAFE+LQEAKN GI  GI++YSSLMGACSNA+NWQ ALELYE++K++KLK TVST+
Sbjct: 709  GKLDAAFELLQEAKNHGINSGIVSYSSLMGACSNARNWQKALELYENIKALKLKLTVSTV 768

Query: 1453 NALITALCDGDQLPKSMEVLSDMKRLGLRLNTITFSILLVASERKDDVEVGLMLLSQAKE 1274
            NALIT+LC+ +QLPK+MEVLS+M+  GL  N IT+SILLVASER  D+EVGLMLLS+A++
Sbjct: 769  NALITSLCEANQLPKAMEVLSEMEESGLSPNIITYSILLVASERNGDLEVGLMLLSKARD 828

Query: 1273 DGVTPSLIMFKCIIGMCLRRYEKARTLGEHVLSFNSGRPQIENKWTSLALMVYREAIVAG 1094
            DG+ P+L+M +CIIGMCLRR+ KA  +GE VLSFNSGRP IENKW S+AL VYRE I AG
Sbjct: 829  DGIAPNLVMSRCIIGMCLRRFVKACAVGEPVLSFNSGRPHIENKWMSVALTVYRETIDAG 888

Query: 1093 TLPTMEVVSQVLGCLQLPYNADIRDRLVENLGVNADSVRRSNLCSLIDGFGEYDPRAFSL 914
            T+PTMEVVS++LGCLQLP +  +R RLVENL V AD  R S+L SLIDGFGEYDPRAFSL
Sbjct: 889  TVPTMEVVSKILGCLQLPRDDSLRSRLVENLEVIADPSRSSSLGSLIDGFGEYDPRAFSL 948

Query: 913  LEEAASLGIVPCVSFKESPVVVDARKLENHTATVYLLTVLKGLKHRLAAGAKLPTVTLLL 734
            LEEAAS GIVPCVSFKESP+VVDAR+L+ +TA VYLLT+LKGLKHRLAAGAKLP++++LL
Sbjct: 949  LEEAASFGIVPCVSFKESPIVVDARELQINTAEVYLLTILKGLKHRLAAGAKLPSISILL 1008

Query: 733  PVKKMQIMSVGEEKTINLAERTSQXXXXXXXXXXXAYQGNESFGKIRINGLALKRWFQPK 554
            P++K QI++ G EK+IN+A R  Q            YQGNES+GKIRINGLAL++WFQPK
Sbjct: 1009 PLEKAQILTSGGEKSINVAGRMGQAIAALLRRIKLPYQGNESYGKIRINGLALRKWFQPK 1068

Query: 553  LASPFSGKPGE--LSTLQLGKVITHQQRNIRTGNLSL 449
            LASPF+GKPGE   S ++LGK I+HQQRNIRTGNLSL
Sbjct: 1069 LASPFTGKPGEWNASQMRLGKGISHQQRNIRTGNLSL 1105


>XP_017619314.1 PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X1 [Gossypium arboreum]
          Length = 1108

 Score = 1207 bits (3124), Expect = 0.0
 Identities = 661/1117 (59%), Positives = 811/1117 (72%), Gaps = 45/1117 (4%)
 Frame = -2

Query: 3664 MDINIF--SPKSQTLALITCTPPLLTWSLQSIRREFVR---------PQSRTRRKCKKLG 3518
            MD N+   SPK QT   +   P   + +   I R+F+            S  RRK K L 
Sbjct: 1    MDSNLIFLSPKFQTPNFLPSYPFSSSTTRPLISRQFLGFTHSLWPSGGASSLRRKRKNLT 60

Query: 3517 LLHTRSSQFLVKASFNPPPNSLLIAVFVTLATFTAVSVACLNHFLKNRNKTTSRQVSGSE 3338
             L  +  +F+ + S +    S L+ V + +   +A+S+A  N F   R   T ++VSGS 
Sbjct: 61   FLRLQPPRFVSRVSID----SNLVFVLIGVTALSALSLAFYNQFF--RKSQTLKKVSGSS 114

Query: 3337 NHALRQ--------LSNDTNQIVDPDDLS----LRSSSGGNENLIEIEGNQVSEERTAQE 3194
              ALRQ        +    +QI++  DL      + + G  E++ E+     S+E   QE
Sbjct: 115  RSALRQQRQGKDVVIQTADHQILEAGDLQRDTFAKENGGLTEHMKEVNDASESKEVFLQE 174

Query: 3193 TIVLHDGPQLTETSISIGAD----------------SFVSPQQECPPFMLSDSGIMQPLI 3062
            T V++    LT+ S S GAD                + V P Q   P +L +SG  QPL 
Sbjct: 175  TAVVNGDSTLTKASESNGADFLPFNTNDSDVLEESGTTVLPLQ---PTVLLESGAGQPLT 231

Query: 3061 FATEMSELQLGKEQKETKSDFELPGAIVIVKSCDSWVLENDAHAEESEPTING--ALTEA 2888
            FAT+ S L L +   E ++D+  P   V  KS  S VL  DA     E  +     + E+
Sbjct: 232  FATQRSGLHLEERVNEFEADY--PRLAVEPKSSASSVLVEDAVVLVGEDKVRNYDIVRES 289

Query: 2887 VREEQYVYLGANQSVPKSPANLEVVKAISSH--ASPLNSFSLFSLKRDSELKGTDLSMQQ 2714
             REE + +  A+  V KS +NL  ++ +SSH  +S  N FS   LK +SEL    LS + 
Sbjct: 290  GREELHTFYEADHLVAKSSSNL-TLRPVSSHVLSSNSNKFSSLKLKPNSELNKDALSAKN 348

Query: 2713 SLQTAEHVEGKILLACHKEDSSHKSKVTRRGRSFPRNKERRHQMQDDSKNILQFPYPNGK 2534
            SLQTA+ VEGK+  A  +   SHK K   RG   PR+K ++H +Q+    + QFP+PNG+
Sbjct: 349  SLQTADMVEGKVTQANFQGGFSHKRKDVGRGMESPRDKGKKHLIQEKDTKLAQFPFPNGE 408

Query: 2533 QANDEDDASEQFRSYNRLIRNGRLTDCIDLLEDMERKGLLDMNQVYHARFFNVCKSQKAI 2354
             AND     E    YN L+R GRL++C+DLLEDME+KGLLDM++VYHA+FF +C  QKA+
Sbjct: 409  LANDNLHPEEYLSYYNCLLRCGRLSECVDLLEDMEQKGLLDMDKVYHAKFFKICSKQKAV 468

Query: 2353 KEAFRFSKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLQLVREAGLKADCKLYTTLITTC 2174
            KEAFRF+KL+ NPTLSTFNMLMSVC  SKDSEGAFQVL+LV+EAG +ADC LYTTLI+TC
Sbjct: 469  KEAFRFTKLIANPTLSTFNMLMSVCGCSKDSEGAFQVLRLVQEAGFQADCILYTTLISTC 528

Query: 2173 AKSGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDR 1994
            AKSGKVD MFEVFHEMVN+GVEPNV+TYGALIDGCA+AGQV KAFGAYGIMRSKNVKPDR
Sbjct: 529  AKSGKVDTMFEVFHEMVNSGVEPNVNTYGALIDGCARAGQVPKAFGAYGIMRSKNVKPDR 588

Query: 1993 VIFNALITACGLSGAVDRAFDVLAEMNAEVHPIDPDHITIGALIKACANAGQVDRAREVY 1814
            V+FNALITACG SGAVDRAFDVLAEM AE  PIDPDHIT+GALIKAC+NAGQV+RAREVY
Sbjct: 589  VVFNALITACGQSGAVDRAFDVLAEMMAETQPIDPDHITVGALIKACSNAGQVERAREVY 648

Query: 1813 KMIHKYNIKGTPEVYTIAVNCCSQTGDWEFACSVYDDMTKKGVVPDEVFLSALIDFAGHA 1634
            KM+HK+NI+GTPEVYTIAVNCCSQTGDWEFAC VY+DM KKG+ PDEVF+SALID AGHA
Sbjct: 649  KMMHKFNIRGTPEVYTIAVNCCSQTGDWEFACGVYNDMKKKGIAPDEVFISALIDVAGHA 708

Query: 1633 GKVDAAFEILQEAKNQGIRVGIIAYSSLMGACSNAKNWQMALELYEHMKSIKLKPTVSTM 1454
            GK+DAAFE+LQEAKN GI  GI++YSSLMGACSNA+NWQ ALELYE++K++KLK TVST+
Sbjct: 709  GKLDAAFELLQEAKNHGINSGIVSYSSLMGACSNARNWQKALELYENIKALKLKLTVSTV 768

Query: 1453 NALITALCDGDQLPKSMEVLSDMKRLGLRLNTITFSILLVASERKDDVEVGLMLLSQAKE 1274
            NALIT+LC+ +QLPK+MEVLS+M+  GL  NTIT+SILLVASER DD+EVGLMLLS+A++
Sbjct: 769  NALITSLCEANQLPKAMEVLSEMEESGLSPNTITYSILLVASERNDDLEVGLMLLSKARD 828

Query: 1273 DGVTPSLIMFKCIIGMCLRRYEKARTLGEHVLSFNSGRPQIENKWTSLALMVYREAIVAG 1094
            DG+ P+L+  +CIIGMCLRR+ KA  +GE VLSFNSGRP IENKWTS+AL VYRE I AG
Sbjct: 829  DGIAPNLVTSRCIIGMCLRRFVKACAVGEPVLSFNSGRPHIENKWTSVALTVYRETIDAG 888

Query: 1093 TLPTMEVVSQVLGCLQLPYNADIRDRLVENLGVNADSVRRSNLCSLIDGFGEYDPRAFSL 914
            T+PTMEVVS++LGCLQLP +  +R RLVENL V AD  R S+L SLIDGFGEYDPR+FSL
Sbjct: 889  TVPTMEVVSKILGCLQLPRDDSLRSRLVENLEVIADPSRSSSLGSLIDGFGEYDPRSFSL 948

Query: 913  LEEAASLGIVPCVSFKESPVVVDARKLENHTATVYLLTVLKGLKHRLAAGAKLPTVTLLL 734
            LEEAAS GIVPCVSFKESP+VVDAR+L+ +TA VYLLT+LKGLKHRLAAGAKLP++++LL
Sbjct: 949  LEEAASFGIVPCVSFKESPIVVDARELQINTAEVYLLTILKGLKHRLAAGAKLPSISILL 1008

Query: 733  PVKKMQIMSVGEEKTINLAERTSQXXXXXXXXXXXAYQGNESFGKIRINGLALKRWFQPK 554
            P++K QI++ G EK+IN+A R  Q            YQGNES+GKIRINGLAL++WFQPK
Sbjct: 1009 PLEKAQILTSGGEKSINVAGRMGQAIAALLRRIKLPYQGNESYGKIRINGLALRKWFQPK 1068

Query: 553  LASPFSGKPGE--LSTLQLGKVITHQQRNIRTGNLSL 449
            LASPF+GKPGE   S ++LGK I+HQQRNIRTGNLSL
Sbjct: 1069 LASPFTGKPGEWNASQMRLGKGISHQQRNIRTGNLSL 1105


>OMO92877.1 hypothetical protein COLO4_17237 [Corchorus olitorius]
          Length = 1089

 Score = 1206 bits (3119), Expect = 0.0
 Identities = 645/1033 (62%), Positives = 787/1033 (76%), Gaps = 34/1033 (3%)
 Frame = -2

Query: 3460 NSLLIAVFVTLATFTAVSVACLNHFLKNRNKTTSRQVSGSENHALRQLSNDT-------- 3305
            N+++ +  V +   +A+S+AC N F  N    +S++ SGS + AL    N T        
Sbjct: 60   NNIISSSAVGVTALSALSLACYNRFFSNTQ--SSKKASGSSSSALPHQKNGTVVEIQTGN 117

Query: 3304 NQIVDPDDLSLRSSSGGNENLIEI--EGNQVSEERTA----QETIVLHDGPQLTETSISI 3143
            +QI++  DL   + +    NL E   E  +  E +      QET V ++   LT+TS S 
Sbjct: 118  SQILENGDLQRETFAKETNNLAEKLRENTEAHENKEVVFQFQETTVANEDLLLTKTSESS 177

Query: 3142 GADSFV----SPQ-------QECP--PFMLSDSGIMQPLIFATEMSELQLGKEQKETKSD 3002
            GAD  V    SP         + P  P +L +SG +QPL+FATEMSEL +  E+ E+ ++
Sbjct: 178  GADCLVFTADSPDASEESGISDIPFQPTVLLESGPLQPLMFATEMSELHI--EEVESINE 235

Query: 3001 FE--LPGAIVIVKSCDSWVLENDAHA--EESEPTIN-GALTEAVREEQYVYLGANQSVPK 2837
            FE  LP   V+  S  S VLE D H   EESE T +     E+VREE + +  A+Q+V  
Sbjct: 236  FEAGLPRIAVVPMSTASSVLEKDDHVLVEESEVTRHYNIFKESVREELHTFYDADQAVEN 295

Query: 2836 SPANLEVVKAISSHASPLNSFSLFSLKRDSELKGTDLSMQQSLQTAEHVEGKILLACHKE 2657
            S  NL  +K +SSH S    FS  +LK++SE     LS + SLQTA+ VEGK+  AC   
Sbjct: 296  SLTNLNGLKPVSSHVS----FS--TLKQNSERNRAQLSSKTSLQTADMVEGKVAQACSNR 349

Query: 2656 DSSHKSKVTRRGRSFPRNKERRHQMQDDSKNILQFPYPNGKQANDEDDASEQFRSYNRLI 2477
             S+HK K   RG  F R+KE +H +Q D+K +  + +PNG  AND     E F SYNRL+
Sbjct: 350  GSTHKRKDFGRGGQFQRDKENKHLIQKDTK-LPPYSFPNGMPANDNHHPEEHFSSYNRLL 408

Query: 2476 RNGRLTDCIDLLEDMERKGLLDMNQVYHARFFNVCKSQKAIKEAFRFSKLVPNPTLSTFN 2297
            R+GRL+DC+ LLEDME+KGLLDMN+VYHA+FF +C  +KA++EAFRF+KL+PNPTLSTFN
Sbjct: 409  RDGRLSDCVTLLEDMEQKGLLDMNKVYHAKFFKICNKKKAVQEAFRFTKLIPNPTLSTFN 468

Query: 2296 MLMSVCASSKDSEGAFQVLQLVREAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNA 2117
            MLMSVCASS+DSEGAF+VL+LV+EAG KADCKLYTTLI+TCAKSGKVD MFEVFHEMVN 
Sbjct: 469  MLMSVCASSQDSEGAFEVLRLVQEAGFKADCKLYTTLISTCAKSGKVDTMFEVFHEMVNC 528

Query: 2116 GVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVIFNALITACGLSGAVDRA 1937
            GVEPNV+TYGALIDGCA+AGQVAKAFGAYGIMRSKNVKPDRV+FNALITACG SGAVDRA
Sbjct: 529  GVEPNVNTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRA 588

Query: 1936 FDVLAEMNAEVHPIDPDHITIGALIKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAV 1757
            FDVLAEM AE  PI+PDHIT+GALIKAC+NAGQVDRAREVYKMI K+NI GTPEVYTIAV
Sbjct: 589  FDVLAEMMAETQPIEPDHITVGALIKACSNAGQVDRAREVYKMIDKFNISGTPEVYTIAV 648

Query: 1756 NCCSQTGDWEFACSVYDDMTKKGVVPDEVFLSALIDFAGHAGKVDAAFEILQEAKNQGIR 1577
            NCCSQ GDWEFAC VY+DM +K V PDEVF+SALID AGHAG +DAAFEIL  AKNQGI 
Sbjct: 649  NCCSQNGDWEFACRVYEDMKRKSVAPDEVFISALIDVAGHAGNLDAAFEILDAAKNQGIN 708

Query: 1576 VGIIAYSSLMGACSNAKNWQMALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKSMEV 1397
            +GI++YSSLMGACSNAKNWQ ALELYE++K++ L  TVST+NA+IT+LC+ DQLPK+MEV
Sbjct: 709  IGIVSYSSLMGACSNAKNWQKALELYENIKALNLNLTVSTVNAVITSLCEADQLPKAMEV 768

Query: 1396 LSDMKRLGLRLNTITFSILLVASERKDDVEVGLMLLSQAKEDGVTPSLIMFKCIIGMCLR 1217
            LS+MK LGL  +TIT+SILL+ASERK+D EVGLMLLSQA++DGV P+++M +CIIGMCLR
Sbjct: 769  LSEMKELGLCPSTITYSILLMASERKNDFEVGLMLLSQARKDGVAPNIVMARCIIGMCLR 828

Query: 1216 RYEKARTLGEHVLSFNSGRPQIENKWTSLALMVYREAIVAGTLPTMEVVSQVLGCLQLPY 1037
            R++K+  +GE VLSFN GRP IENKWTS+AL VYR+ IVAGT+PTMEVVSQ+LGCL++P 
Sbjct: 829  RFKKSCMVGEPVLSFNLGRPHIENKWTSVALAVYRDTIVAGTVPTMEVVSQILGCLRIPL 888

Query: 1036 NADIRDRLVENLGVNADSVRRSNLCSLIDGFGEYDPRAFSLLEEAASLGIVPCVSFKESP 857
            +  ++ RLVENL V+ADS R S+L SLIDGFGEYDPRAFSLLEEAAS GIVPCVSFKESP
Sbjct: 889  DDSLKSRLVENLEVSADSSRYSSLSSLIDGFGEYDPRAFSLLEEAASFGIVPCVSFKESP 948

Query: 856  VVVDARKLENHTATVYLLTVLKGLKHRLAAGAKLPTVTLLLPVKKMQIMSVGEEKTINLA 677
            +V+DAR+L  + A VYLLT+LKGLKHRLAAGAKLP+++++LP+ K QI +  +EK+INLA
Sbjct: 949  IVIDARELPINIAEVYLLTILKGLKHRLAAGAKLPSISIVLPLVKAQISNPEKEKSINLA 1008

Query: 676  ERTSQXXXXXXXXXXXAYQGNESFGKIRINGLALKRWFQPKLASPFSGKPGE--LSTLQL 503
             R  +            YQGNES+GKIRINGLAL RWFQPKLASPF+GKPGE  +S ++L
Sbjct: 1009 GRLGRAIAALLRRIGLPYQGNESYGKIRINGLALNRWFQPKLASPFTGKPGEWNVSQMRL 1068

Query: 502  GKVITHQQRNIRT 464
            GK I HQQRNIRT
Sbjct: 1069 GKGIFHQQRNIRT 1081


>XP_016674532.1 PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X1 [Gossypium hirsutum]
          Length = 1106

 Score = 1206 bits (3119), Expect = 0.0
 Identities = 661/1117 (59%), Positives = 809/1117 (72%), Gaps = 45/1117 (4%)
 Frame = -2

Query: 3664 MDINIF--SPKSQTLALITCTPPLLTWSLQSIRREFVR---------PQSRTRRKCKKLG 3518
            MD N+   SPK QT   +   P   + +   I R+F+            S  RRK K L 
Sbjct: 1    MDSNLIFLSPKFQTPNFLPSYPFSSSTTRPLISRQFLGFTHSLWPPGGASSLRRKRKNLT 60

Query: 3517 LLHTRSSQFLVKASFNPPPNSLLIAVFVTLATFTAVSVACLNHFLKNRNKTTSRQVSGSE 3338
             L  +  +F+ + S +    S L+ V + +   +A S+A  N F   R   T ++VSGS 
Sbjct: 61   FLRLQPPRFVSRVSID----SNLVFVLIGVTALSAFSLAFYNQFF--RKSQTLKKVSGSS 114

Query: 3337 NHALRQ--------LSNDTNQIVDPDDLS----LRSSSGGNENLIEIEGNQVSEERTAQE 3194
              ALRQ        +    +QI++  DL      + + G  E++ E+     S+E   QE
Sbjct: 115  RSALRQQRQGKDVVIQTADHQILEAGDLQRDTFAKENGGLTEHMKEVNDASESKEVFLQE 174

Query: 3193 TIVLHDGPQLTETSISIGAD----------------SFVSPQQECPPFMLSDSGIMQPLI 3062
            T V++    L++ S S GAD                + V P Q   P +L +SG  QPL 
Sbjct: 175  TAVVNGDSTLSKASESNGADFLAFNTNDSDVLEESGTTVLPLQ---PTVLLESGAGQPLT 231

Query: 3061 FATEMSELQLGKEQKETKSDFELPGAIVIVKSCDSWVLENDAHAEESEPTING--ALTEA 2888
            FAT+ S L L +   E ++D+  P   V  KS  S VL  DA     E  +       E+
Sbjct: 232  FATQRSGLHLEERVNEFEADY--PRLAVEPKSSASSVLVEDAVVLVGEDKVRNYDIFRES 289

Query: 2887 VREEQYVYLGANQSVPKSPANLEVVKAISSH--ASPLNSFSLFSLKRDSELKGTDLSMQQ 2714
             REE + +  A+  V KS +NL  ++ +SSH  +S  N FS   LK +SEL    LS + 
Sbjct: 290  GREELHTFYEADHLVAKSSSNL-TLRPVSSHVLSSNSNKFSSLKLKPNSELNKDALSAKN 348

Query: 2713 SLQTAEHVEGKILLACHKEDSSHKSKVTRRGRSFPRNKERRHQMQDDSKNILQFPYPNGK 2534
            SLQTA+ VEGK+  A  +   SHK K   RG   PR+K ++H +Q+    + QFP+PNG+
Sbjct: 349  SLQTADMVEGKVTQANFQGGFSHKRKDVGRGMESPRDKGKKHLIQEKDTKLAQFPFPNGE 408

Query: 2533 QANDEDDASEQFRSYNRLIRNGRLTDCIDLLEDMERKGLLDMNQVYHARFFNVCKSQKAI 2354
             AND     E    YN L+R GRL+DC+DLLEDME+KGLLDM++VYHA+FF +C  QKA+
Sbjct: 409  LANDNLHPEEYLSYYNCLLRCGRLSDCVDLLEDMEQKGLLDMDKVYHAKFFKICSKQKAV 468

Query: 2353 KEAFRFSKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLQLVREAGLKADCKLYTTLITTC 2174
            KEAFRF+KL+ NPTLSTFNMLMSVC  SKDSEGAFQVL+LV+EAG +ADC LYTTLI+TC
Sbjct: 469  KEAFRFTKLIANPTLSTFNMLMSVCGCSKDSEGAFQVLRLVQEAGFQADCILYTTLISTC 528

Query: 2173 AKSGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDR 1994
            AKSGKVD MFEVFHEMVN+GVEPNV+TYGALIDGCA+AGQV KAFGAYGIMRSKNVKPDR
Sbjct: 529  AKSGKVDTMFEVFHEMVNSGVEPNVNTYGALIDGCARAGQVPKAFGAYGIMRSKNVKPDR 588

Query: 1993 VIFNALITACGLSGAVDRAFDVLAEMNAEVHPIDPDHITIGALIKACANAGQVDRAREVY 1814
            V+FNALITACG SGAVDRAFDVLAEM AE  PIDPDHIT+GALIKAC+NAGQV+RAREVY
Sbjct: 589  VVFNALITACGQSGAVDRAFDVLAEMMAETQPIDPDHITVGALIKACSNAGQVERAREVY 648

Query: 1813 KMIHKYNIKGTPEVYTIAVNCCSQTGDWEFACSVYDDMTKKGVVPDEVFLSALIDFAGHA 1634
            KM+HK+NI+GTPEVYTIAVNCCSQTG+WEFAC VY+DM KKG+ PDEVF+SALID AGHA
Sbjct: 649  KMMHKFNIRGTPEVYTIAVNCCSQTGEWEFACGVYNDMKKKGIAPDEVFISALIDVAGHA 708

Query: 1633 GKVDAAFEILQEAKNQGIRVGIIAYSSLMGACSNAKNWQMALELYEHMKSIKLKPTVSTM 1454
            GK+DAAFE+LQEAKN GI  GI++YSSLMGACSNA+NWQ ALELYE++K++KLK TVST+
Sbjct: 709  GKLDAAFELLQEAKNHGINSGIVSYSSLMGACSNARNWQKALELYENIKALKLKLTVSTV 768

Query: 1453 NALITALCDGDQLPKSMEVLSDMKRLGLRLNTITFSILLVASERKDDVEVGLMLLSQAKE 1274
            NALIT+LC+ +QLPK+MEVLS+M+  GL  NTIT+SILLVASER DD+EVGLMLLS+A++
Sbjct: 769  NALITSLCEANQLPKAMEVLSEMEESGLSPNTITYSILLVASERNDDLEVGLMLLSKARD 828

Query: 1273 DGVTPSLIMFKCIIGMCLRRYEKARTLGEHVLSFNSGRPQIENKWTSLALMVYREAIVAG 1094
            DG+ P+L+  +CIIGMCLRR+ KA  +GE VLSFNSGRP IENKWTS+AL VYRE I AG
Sbjct: 829  DGIAPNLVTSRCIIGMCLRRFVKACAVGEPVLSFNSGRPHIENKWTSVALTVYRETIDAG 888

Query: 1093 TLPTMEVVSQVLGCLQLPYNADIRDRLVENLGVNADSVRRSNLCSLIDGFGEYDPRAFSL 914
            T+PTMEVVS++LGCLQLP +  +R RLVENL V AD  R S+L SLIDGFGEYDPR+FSL
Sbjct: 889  TVPTMEVVSKILGCLQLPRDDSLRSRLVENLEVIADPSRSSSLGSLIDGFGEYDPRSFSL 948

Query: 913  LEEAASLGIVPCVSFKESPVVVDARKLENHTATVYLLTVLKGLKHRLAAGAKLPTVTLLL 734
            LEEAAS GIVPCVSFKESP+VVDAR+L+ +TA VYLLT+LKGLKHRLAAGAKLP++++LL
Sbjct: 949  LEEAASFGIVPCVSFKESPIVVDARELQINTAEVYLLTILKGLKHRLAAGAKLPSISILL 1008

Query: 733  PVKKMQIMSVGEEKTINLAERTSQXXXXXXXXXXXAYQGNESFGKIRINGLALKRWFQPK 554
            P++K QI++ G EK+IN+A R  Q            YQGNES+GKIRINGLAL++WFQPK
Sbjct: 1009 PLEKAQILTSGGEKSINVAGRMGQAIAALLRRIKLPYQGNESYGKIRINGLALRKWFQPK 1068

Query: 553  LASPFSGKPGE--LSTLQLGKVITHQQRNIRTGNLSL 449
            LASPF+GKPGE   S L+LGK I+HQQRNIRTGNLSL
Sbjct: 1069 LASPFTGKPGEWNASQLRLGKGISHQQRNIRTGNLSL 1105


>XP_016705784.1 PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like [Gossypium hirsutum]
          Length = 1106

 Score = 1205 bits (3118), Expect = 0.0
 Identities = 661/1117 (59%), Positives = 809/1117 (72%), Gaps = 45/1117 (4%)
 Frame = -2

Query: 3664 MDINIF--SPKSQTLALITCTPPLLTWSLQSIRREFVR---------PQSRTRRKCKKLG 3518
            MD N+   SPK QT   +   P   + +   I R+F+            S  R+K K L 
Sbjct: 1    MDSNLIFLSPKFQTPNFLPSYPFSSSTTRPLISRQFLGFTHSLWPPGGASSLRKKRKNLA 60

Query: 3517 LLHTRSSQFLVKASFNPPPNSLLIAVFVTLATFTAVSVACLNHFLKNRNKTTSRQVSGSE 3338
             L  +  +F+ +AS +    S L+ V + +   +A+S+A  N F   R   TS++VSGS 
Sbjct: 61   FLRFQPPRFVSRASID----SNLVFVVIGVTALSALSLAFYNQFF--RKSQTSKKVSGSS 114

Query: 3337 NHALRQ--------LSNDTNQIVDPDDLS----LRSSSGGNENLIEIEGNQVSEERTAQE 3194
              ALRQ        +    +QI++  DL      + + G  E++ E+     S+E   QE
Sbjct: 115  RSALRQQRQGKDVVIQTADHQILETGDLQRDTFAKENGGLTEHMKEVNDASESKEVLLQE 174

Query: 3193 TIVLHDGPQLTETSISIGAD----------------SFVSPQQECPPFMLSDSGIMQPLI 3062
            T V++    LT+ S S GAD                + V P Q   P +L +SG  QP  
Sbjct: 175  TAVVNGDSMLTKASESNGADFLAFNANDSDVLEESGTTVLPLQ---PTVLLESGAGQPFT 231

Query: 3061 FATEMSELQLGKEQKETKSDFELPGAIVIVKSCDSWVLENDAHAEESEPTING--ALTEA 2888
            FAT+ S L L +   E ++D+  P   V  KS  S VL  DA     E  +       E+
Sbjct: 232  FATQRSGLHLEERVNEFEADY--PRLAVEPKSSASSVLVEDAVVLIGEDKVRNYDIFRES 289

Query: 2887 VREEQYVYLGANQSVPKSPANLEVVKAISSH--ASPLNSFSLFSLKRDSELKGTDLSMQQ 2714
             REE + +  A+    KS +NL  +K +SSH  +S  N FS   LK +SEL    LS + 
Sbjct: 290  GREELHTFYEADHLGAKSSSNL-TLKPVSSHFLSSNSNKFSSLKLKLNSELNKDALSAKN 348

Query: 2713 SLQTAEHVEGKILLACHKEDSSHKSKVTRRGRSFPRNKERRHQMQDDSKNILQFPYPNGK 2534
            SLQTA+ VEGK+  A  +   SHK K   RGR  PR+K ++H +Q+    + QFP+PNG+
Sbjct: 349  SLQTADMVEGKVTQANFQGGFSHKRKDLGRGRESPRDKGKKHLIQEKDTKLAQFPFPNGE 408

Query: 2533 QANDEDDASEQFRSYNRLIRNGRLTDCIDLLEDMERKGLLDMNQVYHARFFNVCKSQKAI 2354
             AND+    E    YN L+R GR +D +DLLEDME+KGLLDM++VYHA+FF +C  Q+A+
Sbjct: 409  LANDKHHPEEYLSYYNHLLRCGRFSDSVDLLEDMEQKGLLDMDKVYHAKFFKICSKQQAV 468

Query: 2353 KEAFRFSKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLQLVREAGLKADCKLYTTLITTC 2174
            KEAFRF+KL+ NPTLSTFNMLMSVC  SKDSEGAFQVL+LV+EAG +ADC LYTTLI+TC
Sbjct: 469  KEAFRFTKLIANPTLSTFNMLMSVCGCSKDSEGAFQVLRLVQEAGFQADCILYTTLISTC 528

Query: 2173 AKSGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDR 1994
            AKSGKVD MFEVFHEMVN+GVEPNV+TYGALIDGCA+AGQV KAFGAYGIMRSKNVKPDR
Sbjct: 529  AKSGKVDTMFEVFHEMVNSGVEPNVNTYGALIDGCARAGQVPKAFGAYGIMRSKNVKPDR 588

Query: 1993 VIFNALITACGLSGAVDRAFDVLAEMNAEVHPIDPDHITIGALIKACANAGQVDRAREVY 1814
            V+FNALITACG SGAVDRAFDVLAEM AE  PIDPDHIT+GALIKAC+NAGQV+RAREVY
Sbjct: 589  VVFNALITACGQSGAVDRAFDVLAEMMAETQPIDPDHITVGALIKACSNAGQVERAREVY 648

Query: 1813 KMIHKYNIKGTPEVYTIAVNCCSQTGDWEFACSVYDDMTKKGVVPDEVFLSALIDFAGHA 1634
            KM+HK+NI+GTPEVYTIAVNCCSQTGDWEFAC VY+DM KKGV PDEVF+SALID AGHA
Sbjct: 649  KMMHKFNIRGTPEVYTIAVNCCSQTGDWEFACGVYNDMKKKGVAPDEVFISALIDVAGHA 708

Query: 1633 GKVDAAFEILQEAKNQGIRVGIIAYSSLMGACSNAKNWQMALELYEHMKSIKLKPTVSTM 1454
            GK+DAAFE+LQEAKN GI  GI++YSSLMGACSNA+NWQ ALELYE++K++KLK TVST+
Sbjct: 709  GKLDAAFELLQEAKNHGINSGIVSYSSLMGACSNARNWQKALELYENIKALKLKLTVSTV 768

Query: 1453 NALITALCDGDQLPKSMEVLSDMKRLGLRLNTITFSILLVASERKDDVEVGLMLLSQAKE 1274
            NALIT+LC+ +QLPK+MEVLS+M+  GL  N IT+SILLVASER  D+EVGLMLLS+A++
Sbjct: 769  NALITSLCEANQLPKAMEVLSEMEESGLSPNIITYSILLVASERNGDLEVGLMLLSKARD 828

Query: 1273 DGVTPSLIMFKCIIGMCLRRYEKARTLGEHVLSFNSGRPQIENKWTSLALMVYREAIVAG 1094
            DG+ P+L+M +CIIGMCLRR+ KA  +GE VLSFNSGRP IENKWTS+AL VYRE I AG
Sbjct: 829  DGIAPNLVMSRCIIGMCLRRFVKACAVGEPVLSFNSGRPHIENKWTSVALTVYRETIDAG 888

Query: 1093 TLPTMEVVSQVLGCLQLPYNADIRDRLVENLGVNADSVRRSNLCSLIDGFGEYDPRAFSL 914
            T+PTMEVVS++LGCLQLP +  +R RLVENL V AD  R S+L SLIDGFGEYDPRAFSL
Sbjct: 889  TVPTMEVVSKILGCLQLPRDDSLRSRLVENLEVIADPSRSSSLGSLIDGFGEYDPRAFSL 948

Query: 913  LEEAASLGIVPCVSFKESPVVVDARKLENHTATVYLLTVLKGLKHRLAAGAKLPTVTLLL 734
            LEEAAS GIVPCVSFKESP+VVDAR+L+ +TA VYLLT+LKGLKHRLAAGAKLP++++LL
Sbjct: 949  LEEAASFGIVPCVSFKESPIVVDARELQINTAEVYLLTILKGLKHRLAAGAKLPSISILL 1008

Query: 733  PVKKMQIMSVGEEKTINLAERTSQXXXXXXXXXXXAYQGNESFGKIRINGLALKRWFQPK 554
            P++K QI++ G EK+IN+A R  Q            YQGNES+GKIRINGLAL++WFQPK
Sbjct: 1009 PLEKAQILTSGGEKSINVAGRMGQAIAALLRRIKLPYQGNESYGKIRINGLALRKWFQPK 1068

Query: 553  LASPFSGKPGE--LSTLQLGKVITHQQRNIRTGNLSL 449
            LASPF+GKPGE   S ++LGK I+HQQRNIRTGNLSL
Sbjct: 1069 LASPFTGKPGEWNASQMRLGKGISHQQRNIRTGNLSL 1105


>XP_011037246.1 PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X2 [Populus euphratica]
          Length = 1104

 Score = 1205 bits (3118), Expect = 0.0
 Identities = 674/1115 (60%), Positives = 808/1115 (72%), Gaps = 50/1115 (4%)
 Frame = -2

Query: 3640 KSQTLALITCTPPLLTWSLQSIRREFV--------RPQSRT----RRKCKKLGLLHTRSS 3497
            KSQTLAL   +   L    Q   R+F+        RP S      R + +KL +    + 
Sbjct: 5    KSQTLALTQIST--LNSINQRGHRQFIGCFGHNLMRPPSGAGLLLRYRGRKLRVQRNGNK 62

Query: 3496 QFLVKASFNPPPNSLLIAVFVTLATFTAVSVAC----LNHFLKNRNKTTSR--QVSGSEN 3335
            +F+VKAS +   NS+L+ V V+   F+A+S+A     +N  +KN  K TS   QV GS +
Sbjct: 63   RFVVKASLDA--NSVLVVVAVS--AFSALSLAYYYRYINSNIKNSKKITSSSIQVLGSPS 118

Query: 3334 HALRQLSND-TNQIVDPDDL-------------SLRSSSGGNENLIEIEGNQVSEERTAQ 3197
             A  QL     N I     L             S  S    +EN  EIE  +   +   Q
Sbjct: 119  FAFSQLGRSIVNHITGSQFLHFGGLHREAHEVESQGSVKKASENSHEIEEKETHVQ--FQ 176

Query: 3196 ETIVLHDGPQLTETSISIGA--------DSFVSPQQECP-------PFMLSDSGIMQPLI 3062
            ET  LH    L +   S GA        D+ V  + E         P + S+SG   PLI
Sbjct: 177  ETASLHGSSLLIKAVESSGANFVAANVCDTVVVEESEVGDARVSPLPSVHSESGSALPLI 236

Query: 3061 FATEMSELQLGKEQKETKSDFELPGAIVIVKSCDSWV-LENDAHAEESEPTINGALTEAV 2885
            FAT+M+EL   K  +E +   EL  ++  VKS    V ++N++  +      NGA++++V
Sbjct: 237  FATQMTELTREKSGEEIEFGSELSESVEKVKSNAVLVPVDNESIDKAELSNYNGAISQSV 296

Query: 2884 REEQYVYLGANQSVPKSPANLEVVKAISSHASPLNSFSLFSLKRDSELKGTDLSMQQSLQ 2705
            RE+ Y + GAN+SV KS +NL + K  SSHAS L S    SLK ++ L+  DLS QQ LQ
Sbjct: 297  REDLYTFYGANRSVVKSASNLGL-KETSSHASLLKSKRFSSLKMNTGLETEDLSSQQPLQ 355

Query: 2704 TAEHVEGKILLACHKEDSSHKSKVTRRGRSFPRNKERRHQMQDDSKNILQFPYPNGKQAN 2525
             A+HV+  + LA ++  S HKSK      + PR++ER+H +QD    + Q P PNG  + 
Sbjct: 356  AADHVQKIMPLAHNEGGSFHKSK------NLPRSRERKHPIQDSHSKLRQLPSPNGIPSK 409

Query: 2524 DEDDASEQFRSYNRLIRNGRLTDCIDLLEDMERKGLLDMNQVYHARFFNVCKSQKAIKEA 2345
             +D  SE + +YNRL+R GRL +C+DLLEDMER+GLLDMN+VYH +FF +C+SQKA+KEA
Sbjct: 410  VKDHPSEDYNAYNRLLREGRLAECLDLLEDMERRGLLDMNKVYHVKFFKLCRSQKAVKEA 469

Query: 2344 FRFSKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLQLVREAGLKADCKLYTTLITTCAKS 2165
            FRF KLV NPTLSTFNMLMSVCASS++S GAF+VLQL +  GLKADCKLYTTLI+TCAKS
Sbjct: 470  FRFCKLVQNPTLSTFNMLMSVCASSQNSAGAFEVLQLAKAVGLKADCKLYTTLISTCAKS 529

Query: 2164 GKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVIF 1985
            GKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCA+AGQVAKAFGAYGIMRSKNVKPDRV+F
Sbjct: 530  GKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVF 589

Query: 1984 NALITACGLSGAVDRAFDVLAEMNAEVHPIDPDHITIGALIKACANAGQVDRAREVYKMI 1805
            NALITACG SGAVDRAFDVLAEM  E  PIDPDHIT+GALIKAC NAGQVDRA+EVY M+
Sbjct: 590  NALITACGQSGAVDRAFDVLAEMTGEAQPIDPDHITVGALIKACTNAGQVDRAQEVYNMV 649

Query: 1804 HKYNIKGTPEVYTIAVNCCSQTGDWEFACSVYDDMTKKGVVPDEVFLSALIDFAGHAGKV 1625
            HKYNIKGTPEVYTIA+N  SQ GDWEFAC VYDDMT+KGVVPDE+FLSALID AGHAGK+
Sbjct: 650  HKYNIKGTPEVYTIAINSSSQIGDWEFACKVYDDMTRKGVVPDEMFLSALIDVAGHAGKM 709

Query: 1624 DAAFEILQEAKNQGIRVGIIAYSSLMGACSNAKNWQMALELYEHMKSIKLKPTVSTMNAL 1445
            DAAFEI+QEAK +G ++GII YSSLMGAC NAKNWQ  LELYE +KS+KLKPTV+T+NAL
Sbjct: 710  DAAFEIIQEAKAKGAQLGIIPYSSLMGACCNAKNWQKGLELYEDIKSMKLKPTVATLNAL 769

Query: 1444 ITALCDGDQLPKSMEVLSDMKRLGLRLNTITFSILLVASERKDDVEVGLMLLSQAKEDGV 1265
            ITALCDGDQL K++EVLS+MK  GLR NTIT+SIL VASERKDD+E GLMLLSQAK+D V
Sbjct: 770  ITALCDGDQLSKALEVLSEMKVWGLRPNTITYSILSVASERKDDLEAGLMLLSQAKKDCV 829

Query: 1264 TPSLIMFKCIIGMCLRRYEKARTLGEHVLSFNSGRPQIENKWTSLALMVYREAIVAGTLP 1085
             P+LIM KCII MCLR++E A TLGE VLSFNSGR QIENKWTS+ALM YR  I AG  P
Sbjct: 830  APTLIMVKCIISMCLRKFENACTLGEPVLSFNSGRAQIENKWTSVALMAYRGTIAAGEKP 889

Query: 1084 TMEVVSQVLGCLQLPYNADIRDRLVENLGVNADSVRRSNLCSLIDGFGEYDPRAFSLLEE 905
            T+E+VSQVLGCLQ+P +A +++RLVENLGV A   R SNLCSL+DGFGEYDPRAFSLLEE
Sbjct: 890  TIELVSQVLGCLQIPCDATLKNRLVENLGVTAVPSRYSNLCSLVDGFGEYDPRAFSLLEE 949

Query: 904  AASLGIVPCVSFKESPVVVDARKLENHTATVYLLTVLKGLKHRLAAGAKLPTVTLLLPVK 725
            AASLGIVPCVSFKESP+ +DA++L+ H A VY LT+LKGLKHRLAAGAKLP +T+LLPV+
Sbjct: 950  AASLGIVPCVSFKESPITMDAKQLQIHIAEVYFLTILKGLKHRLAAGAKLPNITILLPVE 1009

Query: 724  KMQIMSVGEEKTINLAERTSQXXXXXXXXXXXAYQGNESFGKIRINGLALKRWFQPKLAS 545
            K Q +++  EKTIN+A R SQ            YQGNES+GKIRING++L+RW QPKL S
Sbjct: 1010 KAQAITLEGEKTINVAGRISQAVASLLRRLGLPYQGNESYGKIRINGISLRRWLQPKLDS 1069

Query: 544  PFSGKPGELST--LQLGKVITHQQRNIRTGNLSLE 446
            PFSGKPGE ST   +LGK I+ QQRNIRTG+ SLE
Sbjct: 1070 PFSGKPGEWSTSLSRLGKGISFQQRNIRTGDFSLE 1104


>XP_012084399.1 PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic [Jatropha curcas] KDP27602.1 hypothetical
            protein JCGZ_19607 [Jatropha curcas]
          Length = 1112

 Score = 1205 bits (3117), Expect = 0.0
 Identities = 658/1117 (58%), Positives = 810/1117 (72%), Gaps = 44/1117 (3%)
 Frame = -2

Query: 3664 MDINIFSPKSQTLALITCTP-PLLTWSLQSIRREFV------RPQSRTRR--KCKKLGLL 3512
            MD++ FS K Q L LI+ +    L+ +  SIRREF+      RP   + R  KC+K+ + 
Sbjct: 1    MDLS-FSAKFQALTLISTSQISFLSSNKSSIRREFLGCSHNLRPPGGSLRVGKCRKVKIR 59

Query: 3511 HTRSSQFLVKASFNPPPNSLLIAVFVTLATFTAVSVACLNHFL--KNRNKTTSRQVSGSE 3338
             ++S   L+ ASF     S+L+AV V+  T +A+S A LN  +   N N+  S++ SGS 
Sbjct: 60   RSQSQSLLLNASFGS--ESVLVAVAVS--TLSAISFAYLNQQITSNNGNRKDSKEASGSP 115

Query: 3337 NHALRQLS-NDTNQIVDPDDLSLRSS-----SGGNENLIE--------IEGN----QVSE 3212
                 QL  N  N ++      + +S     +  +ENL+E        IEG     QV E
Sbjct: 116  GLGSSQLGKNIVNHVIQTPSADVGNSLRSILATESENLVEKAIENSHAIEGEETVVQVCE 175

Query: 3211 ERTAQETIVLHDGPQLTETSISIG-ADSFVSPQQE-------CPPFMLSDSGIMQPLIF- 3059
                  + +L +  +       +    ++V P++             + +S  + PL+  
Sbjct: 176  NTLRSTSSILFETSEYDNADFPVSNVSNYVVPKESEATNVSVSKESAIPESEKVLPLVLN 235

Query: 3058 ATEMSELQLGKEQKET---KSDFELPGAIVIVKSCDSWVLENDAHAEESE-PTINGALTE 2891
            A  MSEL L K   ET   + D EL   +  + +  +    N    E+ +  + +G + E
Sbjct: 236  ARGMSELTLEKSGNETDVHEVDAELTHLMEQMSNNTASPPVNYEAGEKIDLSSYHGIIKE 295

Query: 2890 AVREEQYVYLGANQSVPKSPANLEVVKAISSHASPLNSFSLFSLKRDSELKGTDLSMQQS 2711
            + RE+ Y++   +QSV KSP NL    ++SSHASP    S  S K +  +K  D S QQS
Sbjct: 296  SAREDLYMFYDKSQSVVKSPLNLNGSNSVSSHASPSIGNSFSSFKVNGIVKEADSSAQQS 355

Query: 2710 LQTAEHVEGKILLACHKEDSSHKSKVTRRGRSFPRNKERRHQMQDDSKNILQFPYPNGKQ 2531
             + AE V+ K+ LA +  +SS K++ TRR R FP  KE+   +Q++   + +FPYPNG  
Sbjct: 356  PKIAESVDKKVRLAHYVRESSRKNENTRRRRGFPTEKEKGRPVQNNQIKLPEFPYPNGVH 415

Query: 2530 ANDEDDASEQFRSYNRLIRNGRLTDCIDLLEDMERKGLLDMNQVYHARFFNVCKSQKAIK 2351
              D+D  S+Q  +YNRL+R+GRLT+C+ LLEDMER+GLLDMN++YHA+FF +CK QKA+ 
Sbjct: 416  VIDKDHPSQQVHAYNRLLRDGRLTECVSLLEDMERRGLLDMNKIYHAKFFKICKIQKAVN 475

Query: 2350 EAFRFSKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLQLVREAGLKADCKLYTTLITTCA 2171
            EAFRF KLVPNPTLST+NMLMSVCASS+DS GAFQVLQL R +GLKADC+LYTTLI+TCA
Sbjct: 476  EAFRFCKLVPNPTLSTYNMLMSVCASSQDSSGAFQVLQLARGSGLKADCRLYTTLISTCA 535

Query: 2170 KSGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRV 1991
            KSGKVD MFEVFH+MVNAGVEPNVHTYGALIDGCA+AGQ+AKAFGAYGIM SK VKPDRV
Sbjct: 536  KSGKVDTMFEVFHKMVNAGVEPNVHTYGALIDGCARAGQLAKAFGAYGIMSSKKVKPDRV 595

Query: 1990 IFNALITACGLSGAVDRAFDVLAEMNAEVHPIDPDHITIGALIKACANAGQVDRAREVYK 1811
            +FNALI ACG SGAVDRAFDVLAEM AE  PIDPDHIT+GALI ACA AGQ++RA+EVY 
Sbjct: 596  VFNALINACGQSGAVDRAFDVLAEMRAETQPIDPDHITVGALINACAKAGQINRAKEVYN 655

Query: 1810 MIHKYNIKGTPEVYTIAVNCCSQTGDWEFACSVYDDMTKKGVVPDEVFLSALIDFAGHAG 1631
            M+H++NIKGTPEVYTIAVNCCSQTGDWEFA SVYDDM +K V PDE+FLSALID AGHAG
Sbjct: 656  MMHEFNIKGTPEVYTIAVNCCSQTGDWEFARSVYDDMKRKDVAPDEMFLSALIDVAGHAG 715

Query: 1630 KVDAAFEILQEAKNQGIRVGIIAYSSLMGACSNAKNWQMALELYEHMKSIKLKPTVSTMN 1451
            KVD AFEILQEA+ QG+++GII YSSLMGACSNAKNWQ ALELYE +KSIK+ PTV T+N
Sbjct: 716  KVDVAFEILQEARIQGMQLGIIPYSSLMGACSNAKNWQKALELYEDIKSIKVNPTVPTLN 775

Query: 1450 ALITALCDGDQLPKSMEVLSDMKRLGLRLNTITFSILLVASERKDDVEVGLMLLSQAKED 1271
            ALITALCDGDQLPK++EV+S+MK   L  NT+T+SIL VASERKDD+EVGL LLSQAKED
Sbjct: 776  ALITALCDGDQLPKAIEVMSEMKSFRLCPNTVTYSILFVASERKDDLEVGLRLLSQAKED 835

Query: 1270 GVTPSLIMFKCIIGMCLRRYEKARTLGEHVLSFNSGRPQIENKWTSLALMVYREAIVAGT 1091
             + P+LIM+KCIIGMCLRRYEK   LGE VLSF+SGRPQ++N+WTSLALMVYRE I AG 
Sbjct: 836  CIAPTLIMYKCIIGMCLRRYEKVCALGEPVLSFDSGRPQMKNEWTSLALMVYRETIAAGE 895

Query: 1090 LPTMEVVSQVLGCLQLPYNADIRDRLVENLGVNADSVRRSNLCSLIDGFGEYDPRAFSLL 911
              TMEVVSQVLGCLQLP++A ++ RLVENLGV  DS + SNLCSL+DGFGEYDPRAFSLL
Sbjct: 896  KLTMEVVSQVLGCLQLPFDASLKHRLVENLGVTTDSSKVSNLCSLVDGFGEYDPRAFSLL 955

Query: 910  EEAASLGIVPCVSFKESPVVVDARKLENHTATVYLLTVLKGLKHRLAAGAKLPTVTLLLP 731
            EEAASLGI+PCVSFKESP++VDA+ L++H A VYLLT+LKGLKHRLAAGA+LP +T+LLP
Sbjct: 956  EEAASLGIIPCVSFKESPIIVDAKALQSHVAQVYLLTILKGLKHRLAAGARLPNITILLP 1015

Query: 730  VKKMQIMSVGEEKTINLAERTSQXXXXXXXXXXXAYQGNESFGKIRINGLALKRWFQPKL 551
             +  Q+     EKTIN+A R SQ            YQGNES+GKIRING++LKRWFQPKL
Sbjct: 1016 TETAQVKVPEGEKTINIAARVSQDVAALLRRLRLHYQGNESYGKIRINGISLKRWFQPKL 1075

Query: 550  ASPFSGKPGEL--STLQLGKVITHQQRNIRTGNLSLE 446
            A PFSGKP EL  S L++GK I+HQQRNIRTGNLSLE
Sbjct: 1076 AYPFSGKPEELNSSLLRIGKDISHQQRNIRTGNLSLE 1112


>XP_002534048.1 PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic [Ricinus communis] EEF28334.1
            pentatricopeptide repeat-containing protein, putative
            [Ricinus communis]
          Length = 1129

 Score = 1201 bits (3107), Expect = 0.0
 Identities = 655/1129 (58%), Positives = 803/1129 (71%), Gaps = 62/1129 (5%)
 Frame = -2

Query: 3649 FSPKSQTLALITCTPPLLTWSLQS-IRREFVRPQSRTR----------RKCKKLGLLHTR 3503
            FSPKSQ+LAL++ T    + +  S IRR+F+      R          RK KK+ +    
Sbjct: 5    FSPKSQSLALLSTTNTKFSSTKSSFIRRQFLGCSHNLRPPGSASPLRGRKSKKIKIREKN 64

Query: 3502 SSQ-FLVKASFNPPPNSLLIAVFVTLATFTAVSVACLNHFLKNRNKTTSRQVSGSENHAL 3326
             SQ  L+ ASF        + V V ++TF+A+S A L+H   N+N    +         L
Sbjct: 65   QSQSLLINASFRLDS----VLVVVAVSTFSALSFAYLHHHFTNKNNKKRKTSKEDLGDGL 120

Query: 3325 RQLS-NDTNQIVDPDDLSL----------------------RSSSGGNENLIEIE----- 3230
             QL  N  N IV    L +                      R +S   EN++  E     
Sbjct: 121  SQLGKNIVNNIVRSPFLDVGHLHKVTSTTLEVKSKDLVDNARENSYVIENVLPNETSVLV 180

Query: 3229 -------GNQVSEERTAQETIVLHDGPQLTETSISIGADS-----FVSPQQECPPFMLSD 3086
                    + V E   + ET VL +  +    S      S      VS Q +    +L  
Sbjct: 181  ESTESDKNSYVIENALSNETSVLVESTESDNNSADFTVSSNVCTYVVSKQSDNASVLLDP 240

Query: 3085 SGIMQ------PLIFATEMSELQLGKEQKETKSDFELPGAIVIVKSCD--SWVLENDAHA 2930
              ++       PL FA E+SEL + + + ET+ D EL   ++  KS D  S  + ++   
Sbjct: 241  VPVIHGSESVLPLEFARELSELTIERSRDETEVDSELT-QLLEEKSNDTASSTMNDEIGK 299

Query: 2929 EESEPTINGALTEAVREEQYVYLGANQSVPKSPANLEVVKAISSHASPLNSFSLFSLKRD 2750
            ++   +      ++ RE+ Y +   +QS  KSP+NL  +  +SSHA+PL   ++ SLK +
Sbjct: 300  KDGISSYYDITKKSAREDLYKFYEESQSTEKSPSNLNGLDTVSSHAAPLIGNNISSLKVN 359

Query: 2749 SELKGTDLSMQQSLQTAEHVEGKILLACHKEDSSHKSKVTRRGRSFPRNKERRHQMQDDS 2570
               K  +L   QS Q AE VE K+ LA ++  +S K++     R FPR KE+ H +QD+ 
Sbjct: 360  GVGKEAELLSPQSPQFAETVERKVHLARYERGASRKNEHIGGRRGFPREKEKGHVIQDEH 419

Query: 2569 KNILQFPYPNGKQANDEDDASEQFRSYNRLIRNGRLTDCIDLLEDMERKGLLDMNQVYHA 2390
             N+ +FPYPNG  + ++D  +EQ   YNRL+R+GRL +C+DLLEDMER+GLLDM+++YHA
Sbjct: 420  TNLPEFPYPNGVHSTNKDHKAEQVHGYNRLLRDGRLAECVDLLEDMERRGLLDMSKIYHA 479

Query: 2389 RFFNVCKSQKAIKEAFRFSKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLQLVREAGLKA 2210
            +FF +CK QKA+KEAFRF KLVPNP+LSTFNMLMSVC+SS+DS+GAF+VL+L + AGLKA
Sbjct: 480  KFFKICKIQKAVKEAFRFCKLVPNPSLSTFNMLMSVCSSSQDSDGAFEVLRLAQGAGLKA 539

Query: 2209 DCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAY 2030
            DCKLYTTLI+TCAKSGKVDAMFEVFHEMVNAGVEPNVHTYG+LIDGCAKAGQ+AKAFGAY
Sbjct: 540  DCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGSLIDGCAKAGQMAKAFGAY 599

Query: 2029 GIMRSKNVKPDRVIFNALITACGLSGAVDRAFDVLAEMNAEVHPIDPDHITIGALIKACA 1850
            GI+RSKNVKPDRV+FNALITACG SGAVDRAFDVLAEM AE HPIDPDHIT+GAL+KACA
Sbjct: 600  GILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAETHPIDPDHITVGALMKACA 659

Query: 1849 NAGQVDRAREVYKMIHKYNIKGTPEVYTIAVNCCSQTGDWEFACSVYDDMTKKGVVPDEV 1670
             AGQVDRA+EVY M+HKYNIKGTPEVYTIAVN CSQTGDWEFA SVYDDMT+KGV PDE+
Sbjct: 660  KAGQVDRAKEVYNMLHKYNIKGTPEVYTIAVNFCSQTGDWEFARSVYDDMTRKGVAPDEM 719

Query: 1669 FLSALIDFAGHAGKVDAAFEILQEAKNQGIRVGIIAYSSLMGACSNAKNWQMALELYEHM 1490
            FLSAL+D AGHAG VD AFE LQEA+ QG ++GI+ YSSLMGACSNAKNWQ ALELYE +
Sbjct: 720  FLSALVDVAGHAGLVDIAFETLQEARTQGTQLGIVPYSSLMGACSNAKNWQKALELYEDI 779

Query: 1489 KSIKLKPTVSTMNALITALCDGDQLPKSMEVLSDMKRLGLRLNTITFSILLVASERKDDV 1310
            K+IKLKPTVSTMNAL+TALCDGDQL K++E LS+MK  GL  N +T+SILLVASERKDD+
Sbjct: 780  KAIKLKPTVSTMNALMTALCDGDQLQKALETLSEMKSFGLCPNIVTYSILLVASERKDDL 839

Query: 1309 EVGLMLLSQAKEDGVTPSLIMFKCIIGMCLRRYEKARTLGEHVLSFNSGRPQIENKWTSL 1130
            + G MLLSQAKED +TP+ +M+KCIIGMCLRRY+KA +LGE +LSF+SGRPQI+N+WTS 
Sbjct: 840  DAGDMLLSQAKEDCITPTFLMYKCIIGMCLRRYKKACSLGESILSFDSGRPQIKNEWTSR 899

Query: 1129 ALMVYREAIVAGTLPTMEVVSQVLGCLQLPYNADIRDRLVENLGVNADSVRRSNLCSLID 950
            AL VYRE I AG  PTMEVVSQVLGCLQLP +A ++ RLVENLGV AD  + SNLC+L+D
Sbjct: 900  ALTVYRETIAAGEKPTMEVVSQVLGCLQLPCDASLKGRLVENLGVTADPSKFSNLCALVD 959

Query: 949  GFGEYDPRAFSLLEEAASLGIVPCVSFKESPVVVDARKLENHTATVYLLTVLKGLKHRLA 770
            GFGEYDPRAFSLLEEAASLG VPC SFKESP+V+DA+ L++H A VYLLT+LKGLKHRLA
Sbjct: 960  GFGEYDPRAFSLLEEAASLGTVPCASFKESPIVMDAKLLQSHIAEVYLLTILKGLKHRLA 1019

Query: 769  AGAKLPTVTLLLPVKKMQIMSVGEEKTINLAERTSQXXXXXXXXXXXAYQGNESFGKIRI 590
            AGAKLP +T+LLP +  QI ++  EKTINLA R SQ            YQGNES+GKIRI
Sbjct: 1020 AGAKLPNITILLPTEMTQIKTLKGEKTINLAGRISQDVASLLRRLGLPYQGNESYGKIRI 1079

Query: 589  NGLALKRWFQPKLASPFSGKPGEL--STLQLGKVITHQQRNIRTGNLSL 449
            NG++L+RW QPKLASPFSGKP EL  S  ++GK ITHQQRNIRTGNLSL
Sbjct: 1080 NGISLRRWLQPKLASPFSGKPEELSFSLSRIGKGITHQQRNIRTGNLSL 1128


>XP_012442074.1 PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X2 [Gossypium raimondii]
          Length = 1073

 Score = 1200 bits (3104), Expect = 0.0
 Identities = 655/1101 (59%), Positives = 797/1101 (72%), Gaps = 29/1101 (2%)
 Frame = -2

Query: 3664 MDINIF--SPKSQTLALITCTP-------PLLTWSLQSIRREFVRP--QSRTRRKCKKLG 3518
            MD N+   SPK QT   +   P       PL++            P   S  R+K K L 
Sbjct: 1    MDSNLIFLSPKFQTPNFLPSYPFSSSTTRPLISRQFLGFTHSLWHPGGASSLRKKRKNLA 60

Query: 3517 LLHTRSSQFLVKASFNPPPNSLLIAVFVTLATFTAVSVACLNHFLKNRNKTTSRQVSGSE 3338
             L  +  +F+ +AS +    S L+ V + +   +A+S+A  N F   R   TS++VSGS 
Sbjct: 61   FLRFQPPRFVSRASID----SNLVFVVIGVTALSALSLAFYNQFF--RKSQTSKKVSGSS 114

Query: 3337 NHALRQ--------LSNDTNQIVDPDDLS----LRSSSGGNENLIEIEGNQVSEERTAQE 3194
              ALRQ        +    +QI++  DL      + + G  E++ E+     S+E   QE
Sbjct: 115  RSALRQQRQGKDVVIQTADHQILETGDLQRDTFAKENGGLTEHMKEVNDASESKEVLLQE 174

Query: 3193 TIVLHDGPQLTETSISIGADSFVSPQQECPPFMLSDSGIMQPLIFATEMSELQLGKEQKE 3014
            T V++    LT+ S S GA                     QP  FAT+ S L L +   E
Sbjct: 175  TAVVNGDSMLTKASESNGAG--------------------QPFTFATQRSGLHLEERVNE 214

Query: 3013 TKSDFELPGAIVIVKSCDSWVLENDAHAEESEPTING--ALTEAVREEQYVYLGANQSVP 2840
             ++D+  P   V  KS  S VL  DA     E  +       E+ REE + +  A+  V 
Sbjct: 215  FEADY--PRLAVEPKSSASSVLVEDAVVLIGEDKVRNYDIFRESGREELHTFYEADHLVA 272

Query: 2839 KSPANLEVVKAISSH--ASPLNSFSLFSLKRDSELKGTDLSMQQSLQTAEHVEGKILLAC 2666
            KS +NL  +K +SSH  +S  N FS   LK +SEL    LS + SLQTA+ VEGK+  A 
Sbjct: 273  KSSSNL-TLKPVSSHFLSSNSNKFSSLKLKLNSELNKDALSAKNSLQTADMVEGKVTQAN 331

Query: 2665 HKEDSSHKSKVTRRGRSFPRNKERRHQMQDDSKNILQFPYPNGKQANDEDDASEQFRSYN 2486
             +   SHK K   RGR  PR+K ++H +Q+    + QFP+PNG+ AND+    E    YN
Sbjct: 332  FQGGFSHKRKHLGRGRESPRDKGKKHLIQEKDTKLAQFPFPNGELANDKHHPEEYLSYYN 391

Query: 2485 RLIRNGRLTDCIDLLEDMERKGLLDMNQVYHARFFNVCKSQKAIKEAFRFSKLVPNPTLS 2306
             L+R GRL+D +DLLEDME+KGLLDM++VYHA+FF +C  QKA+KEAFRF+KL+ NPTLS
Sbjct: 392  HLLRCGRLSDSVDLLEDMEQKGLLDMDKVYHAKFFKICSKQKAVKEAFRFTKLIANPTLS 451

Query: 2305 TFNMLMSVCASSKDSEGAFQVLQLVREAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEM 2126
            TFNMLMSVC  SKDSEGAFQVL+LV+EAG +ADC LYTTLI+TCAKSGKVD MFEVFHEM
Sbjct: 452  TFNMLMSVCGCSKDSEGAFQVLRLVQEAGFQADCILYTTLISTCAKSGKVDTMFEVFHEM 511

Query: 2125 VNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVIFNALITACGLSGAV 1946
            VN+GVEPNV+TYGALIDGCA+AGQV KAFGAYGIMRSKNVKPDRV+FNALITACG SGAV
Sbjct: 512  VNSGVEPNVNTYGALIDGCARAGQVPKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAV 571

Query: 1945 DRAFDVLAEMNAEVHPIDPDHITIGALIKACANAGQVDRAREVYKMIHKYNIKGTPEVYT 1766
            DRAFDVLAEM AE  PIDPDHIT+GALIKAC+NAGQV+RAREVYKM+HK+NI+GTPEVYT
Sbjct: 572  DRAFDVLAEMMAETQPIDPDHITVGALIKACSNAGQVERAREVYKMMHKFNIRGTPEVYT 631

Query: 1765 IAVNCCSQTGDWEFACSVYDDMTKKGVVPDEVFLSALIDFAGHAGKVDAAFEILQEAKNQ 1586
            IAVNCCSQTGDWEFAC VY+DM KKGV PDEVF+SALID AGHAGK+DAAFE+LQEAKN 
Sbjct: 632  IAVNCCSQTGDWEFACGVYNDMKKKGVAPDEVFISALIDVAGHAGKLDAAFELLQEAKNH 691

Query: 1585 GIRVGIIAYSSLMGACSNAKNWQMALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKS 1406
            GI  GI++YSSLMGACSNA+NWQ ALELYE++K++KLK TVST+NALIT+LC+ +QLPK+
Sbjct: 692  GINSGIVSYSSLMGACSNARNWQKALELYENIKALKLKLTVSTVNALITSLCEANQLPKA 751

Query: 1405 MEVLSDMKRLGLRLNTITFSILLVASERKDDVEVGLMLLSQAKEDGVTPSLIMFKCIIGM 1226
            MEVLS+M+  GL  N IT+SILLVASER  D+EVGLMLLS+A++DG+ P+L+M +CIIGM
Sbjct: 752  MEVLSEMEESGLSPNIITYSILLVASERNGDLEVGLMLLSKARDDGIAPNLVMSRCIIGM 811

Query: 1225 CLRRYEKARTLGEHVLSFNSGRPQIENKWTSLALMVYREAIVAGTLPTMEVVSQVLGCLQ 1046
            CLRR+ KA  +GE VLSFNSGRP IENKW S+AL VYRE I AGT+PTMEVVS++LGCLQ
Sbjct: 812  CLRRFVKACAVGEPVLSFNSGRPHIENKWMSVALTVYRETIDAGTVPTMEVVSKILGCLQ 871

Query: 1045 LPYNADIRDRLVENLGVNADSVRRSNLCSLIDGFGEYDPRAFSLLEEAASLGIVPCVSFK 866
            LP +  +R RLVENL V AD  R S+L SLIDGFGEYDPRAFSLLEEAAS GIVPCVSFK
Sbjct: 872  LPRDDSLRSRLVENLEVIADPSRSSSLGSLIDGFGEYDPRAFSLLEEAASFGIVPCVSFK 931

Query: 865  ESPVVVDARKLENHTATVYLLTVLKGLKHRLAAGAKLPTVTLLLPVKKMQIMSVGEEKTI 686
            ESP+VVDAR+L+ +TA VYLLT+LKGLKHRLAAGAKLP++++LLP++K QI++ G EK+I
Sbjct: 932  ESPIVVDARELQINTAEVYLLTILKGLKHRLAAGAKLPSISILLPLEKAQILTSGGEKSI 991

Query: 685  NLAERTSQXXXXXXXXXXXAYQGNESFGKIRINGLALKRWFQPKLASPFSGKPGE--LST 512
            N+A R  Q            YQGNES+GKIRINGLAL++WFQPKLASPF+GKPGE   S 
Sbjct: 992  NVAGRMGQAIAALLRRIKLPYQGNESYGKIRINGLALRKWFQPKLASPFTGKPGEWNASQ 1051

Query: 511  LQLGKVITHQQRNIRTGNLSL 449
            ++LGK I+HQQRNIRTGNLSL
Sbjct: 1052 MRLGKGISHQQRNIRTGNLSL 1072


>XP_011037244.1 PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X1 [Populus euphratica]
          Length = 1109

 Score = 1199 bits (3102), Expect = 0.0
 Identities = 674/1120 (60%), Positives = 808/1120 (72%), Gaps = 55/1120 (4%)
 Frame = -2

Query: 3640 KSQTLALITCTPPLLTWSLQSIRREFV--------RPQSRT----RRKCKKLGLLHTRSS 3497
            KSQTLAL   +   L    Q   R+F+        RP S      R + +KL +    + 
Sbjct: 5    KSQTLALTQIST--LNSINQRGHRQFIGCFGHNLMRPPSGAGLLLRYRGRKLRVQRNGNK 62

Query: 3496 QFLVKASFNPPPNSLLIAVFVTLATFTAVSVAC----LNHFLKNRNKTTSR--QVSGSEN 3335
            +F+VKAS +   NS+L+ V V+   F+A+S+A     +N  +KN  K TS   QV GS +
Sbjct: 63   RFVVKASLDA--NSVLVVVAVS--AFSALSLAYYYRYINSNIKNSKKITSSSIQVLGSPS 118

Query: 3334 HALRQLSND-TNQIVDPDDL-------------SLRSSSGGNENLIEIEGNQVSEERTAQ 3197
             A  QL     N I     L             S  S    +EN  EIE  +   +   Q
Sbjct: 119  FAFSQLGRSIVNHITGSQFLHFGGLHREAHEVESQGSVKKASENSHEIEEKETHVQ--FQ 176

Query: 3196 ETIVLHDGPQLTETSISIGA--------DSFVSPQQECP-------PFMLSDSGIMQPLI 3062
            ET  LH    L +   S GA        D+ V  + E         P + S+SG   PLI
Sbjct: 177  ETASLHGSSLLIKAVESSGANFVAANVCDTVVVEESEVGDARVSPLPSVHSESGSALPLI 236

Query: 3061 FATEMSELQLGKEQKETKSDFELPGAIVIVKSCDSWV-LENDAHAEESEPTINGALTEAV 2885
            FAT+M+EL   K  +E +   EL  ++  VKS    V ++N++  +      NGA++++V
Sbjct: 237  FATQMTELTREKSGEEIEFGSELSESVEKVKSNAVLVPVDNESIDKAELSNYNGAISQSV 296

Query: 2884 REEQYVYLGANQSVPKSPANLEVVKAISSHASPLNSFSLFSLKRDSELKGTDLSMQQSLQ 2705
            RE+ Y + GAN+SV KS +NL + K  SSHAS L S    SLK ++ L+  DLS QQ LQ
Sbjct: 297  REDLYTFYGANRSVVKSASNLGL-KETSSHASLLKSKRFSSLKMNTGLETEDLSSQQPLQ 355

Query: 2704 TAEHVEGKILLACHKEDSSHKSKVTRRGRSFPRNKERRHQMQDDSKNILQFPYPNGKQAN 2525
             A+HV+  + LA ++  S HKSK      + PR++ER+H +QD    + Q P PNG  + 
Sbjct: 356  AADHVQKIMPLAHNEGGSFHKSK------NLPRSRERKHPIQDSHSKLRQLPSPNGIPSK 409

Query: 2524 DEDDASEQFRSYNRLIRNGRLTDCIDLLEDMERKGLLDMNQVYHARFFNVCKSQKAIKEA 2345
             +D  SE + +YNRL+R GRL +C+DLLEDMER+GLLDMN+VYH +FF +C+SQKA+KEA
Sbjct: 410  VKDHPSEDYNAYNRLLREGRLAECLDLLEDMERRGLLDMNKVYHVKFFKLCRSQKAVKEA 469

Query: 2344 FRFSKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLQLVREAGLKADCKLYTTLITTCAKS 2165
            FRF KLV NPTLSTFNMLMSVCASS++S GAF+VLQL +  GLKADCKLYTTLI+TCAKS
Sbjct: 470  FRFCKLVQNPTLSTFNMLMSVCASSQNSAGAFEVLQLAKAVGLKADCKLYTTLISTCAKS 529

Query: 2164 GKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVIF 1985
            GKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCA+AGQVAKAFGAYGIMRSKNVKPDRV+F
Sbjct: 530  GKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVF 589

Query: 1984 NALITACGLSGAVDRAFDVLAEMNAEVHPIDPDHITIGALIKACANAGQVDRAREVYKMI 1805
            NALITACG SGAVDRAFDVLAEM  E  PIDPDHIT+GALIKAC NAGQVDRA+EVY M+
Sbjct: 590  NALITACGQSGAVDRAFDVLAEMTGEAQPIDPDHITVGALIKACTNAGQVDRAQEVYNMV 649

Query: 1804 HKYNIKGTPEVYTIAVNCCSQTGDWEFACSVYDDMTKKGVVPDEVFLSALIDFAGHAGKV 1625
            HKYNIKGTPEVYTIA+N  SQ GDWEFAC VYDDMT+KGVVPDE+FLSALID AGHAGK+
Sbjct: 650  HKYNIKGTPEVYTIAINSSSQIGDWEFACKVYDDMTRKGVVPDEMFLSALIDVAGHAGKM 709

Query: 1624 DAAFEILQEAKNQGIRVGIIAYSSLMGACSNAKNWQMALELYEHMKSIKLKPTVSTMNAL 1445
            DAAFEI+QEAK +G ++GII YSSLMGAC NAKNWQ  LELYE +KS+KLKPTV+T+NAL
Sbjct: 710  DAAFEIIQEAKAKGAQLGIIPYSSLMGACCNAKNWQKGLELYEDIKSMKLKPTVATLNAL 769

Query: 1444 ITALCDGDQLPKSMEVLSDMKRLGLRLNTITFSILLVASERKDDVEVGLMLLSQAKEDGV 1265
            ITALCDGDQL K++EVLS+MK  GLR NTIT+SIL VASERKDD+E GLMLLSQAK+D V
Sbjct: 770  ITALCDGDQLSKALEVLSEMKVWGLRPNTITYSILSVASERKDDLEAGLMLLSQAKKDCV 829

Query: 1264 TPSLIMFKCIIGMCLRRYEKARTLGEHVLSFNSGRPQIENKWTSLALMVYREAIVAGTLP 1085
             P+LIM KCII MCLR++E A TLGE VLSFNSGR QIENKWTS+ALM YR  I AG  P
Sbjct: 830  APTLIMVKCIISMCLRKFENACTLGEPVLSFNSGRAQIENKWTSVALMAYRGTIAAGEKP 889

Query: 1084 TMEVVSQVLGCLQLPYNADIRDRLVENLGVNADSVRRSNLCSLIDGFGEYDPRAFSLLE- 908
            T+E+VSQVLGCLQ+P +A +++RLVENLGV A   R SNLCSL+DGFGEYDPRAFSLLE 
Sbjct: 890  TIELVSQVLGCLQIPCDATLKNRLVENLGVTAVPSRYSNLCSLVDGFGEYDPRAFSLLEI 949

Query: 907  ----EAASLGIVPCVSFKESPVVVDARKLENHTATVYLLTVLKGLKHRLAAGAKLPTVTL 740
                EAASLGIVPCVSFKESP+ +DA++L+ H A VY LT+LKGLKHRLAAGAKLP +T+
Sbjct: 950  CHLQEAASLGIVPCVSFKESPITMDAKQLQIHIAEVYFLTILKGLKHRLAAGAKLPNITI 1009

Query: 739  LLPVKKMQIMSVGEEKTINLAERTSQXXXXXXXXXXXAYQGNESFGKIRINGLALKRWFQ 560
            LLPV+K Q +++  EKTIN+A R SQ            YQGNES+GKIRING++L+RW Q
Sbjct: 1010 LLPVEKAQAITLEGEKTINVAGRISQAVASLLRRLGLPYQGNESYGKIRINGISLRRWLQ 1069

Query: 559  PKLASPFSGKPGELST--LQLGKVITHQQRNIRTGNLSLE 446
            PKL SPFSGKPGE ST   +LGK I+ QQRNIRTG+ SLE
Sbjct: 1070 PKLDSPFSGKPGEWSTSLSRLGKGISFQQRNIRTGDFSLE 1109


>XP_017619315.1 PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X2 [Gossypium arboreum]
          Length = 1075

 Score = 1198 bits (3100), Expect = 0.0
 Identities = 653/1101 (59%), Positives = 800/1101 (72%), Gaps = 29/1101 (2%)
 Frame = -2

Query: 3664 MDINIF--SPKSQTLALITCTPPLLTWSLQSIRREFVR---------PQSRTRRKCKKLG 3518
            MD N+   SPK QT   +   P   + +   I R+F+            S  RRK K L 
Sbjct: 1    MDSNLIFLSPKFQTPNFLPSYPFSSSTTRPLISRQFLGFTHSLWPSGGASSLRRKRKNLT 60

Query: 3517 LLHTRSSQFLVKASFNPPPNSLLIAVFVTLATFTAVSVACLNHFLKNRNKTTSRQVSGSE 3338
             L  +  +F+ + S +    S L+ V + +   +A+S+A  N F   R   T ++VSGS 
Sbjct: 61   FLRLQPPRFVSRVSID----SNLVFVLIGVTALSALSLAFYNQFF--RKSQTLKKVSGSS 114

Query: 3337 NHALRQ--------LSNDTNQIVDPDDLS----LRSSSGGNENLIEIEGNQVSEERTAQE 3194
              ALRQ        +    +QI++  DL      + + G  E++ E+     S+E   QE
Sbjct: 115  RSALRQQRQGKDVVIQTADHQILEAGDLQRDTFAKENGGLTEHMKEVNDASESKEVFLQE 174

Query: 3193 TIVLHDGPQLTETSISIGADSFVSPQQECPPFMLSDSGIMQPLIFATEMSELQLGKEQKE 3014
            T V++    LT+ S S GA                     QPL FAT+ S L L +   E
Sbjct: 175  TAVVNGDSTLTKASESNGAG--------------------QPLTFATQRSGLHLEERVNE 214

Query: 3013 TKSDFELPGAIVIVKSCDSWVLENDAHAEESEPTING--ALTEAVREEQYVYLGANQSVP 2840
             ++D+  P   V  KS  S VL  DA     E  +     + E+ REE + +  A+  V 
Sbjct: 215  FEADY--PRLAVEPKSSASSVLVEDAVVLVGEDKVRNYDIVRESGREELHTFYEADHLVA 272

Query: 2839 KSPANLEVVKAISSH--ASPLNSFSLFSLKRDSELKGTDLSMQQSLQTAEHVEGKILLAC 2666
            KS +NL  ++ +SSH  +S  N FS   LK +SEL    LS + SLQTA+ VEGK+  A 
Sbjct: 273  KSSSNL-TLRPVSSHVLSSNSNKFSSLKLKPNSELNKDALSAKNSLQTADMVEGKVTQAN 331

Query: 2665 HKEDSSHKSKVTRRGRSFPRNKERRHQMQDDSKNILQFPYPNGKQANDEDDASEQFRSYN 2486
             +   SHK K   RG   PR+K ++H +Q+    + QFP+PNG+ AND     E    YN
Sbjct: 332  FQGGFSHKRKDVGRGMESPRDKGKKHLIQEKDTKLAQFPFPNGELANDNLHPEEYLSYYN 391

Query: 2485 RLIRNGRLTDCIDLLEDMERKGLLDMNQVYHARFFNVCKSQKAIKEAFRFSKLVPNPTLS 2306
             L+R GRL++C+DLLEDME+KGLLDM++VYHA+FF +C  QKA+KEAFRF+KL+ NPTLS
Sbjct: 392  CLLRCGRLSECVDLLEDMEQKGLLDMDKVYHAKFFKICSKQKAVKEAFRFTKLIANPTLS 451

Query: 2305 TFNMLMSVCASSKDSEGAFQVLQLVREAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEM 2126
            TFNMLMSVC  SKDSEGAFQVL+LV+EAG +ADC LYTTLI+TCAKSGKVD MFEVFHEM
Sbjct: 452  TFNMLMSVCGCSKDSEGAFQVLRLVQEAGFQADCILYTTLISTCAKSGKVDTMFEVFHEM 511

Query: 2125 VNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVIFNALITACGLSGAV 1946
            VN+GVEPNV+TYGALIDGCA+AGQV KAFGAYGIMRSKNVKPDRV+FNALITACG SGAV
Sbjct: 512  VNSGVEPNVNTYGALIDGCARAGQVPKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAV 571

Query: 1945 DRAFDVLAEMNAEVHPIDPDHITIGALIKACANAGQVDRAREVYKMIHKYNIKGTPEVYT 1766
            DRAFDVLAEM AE  PIDPDHIT+GALIKAC+NAGQV+RAREVYKM+HK+NI+GTPEVYT
Sbjct: 572  DRAFDVLAEMMAETQPIDPDHITVGALIKACSNAGQVERAREVYKMMHKFNIRGTPEVYT 631

Query: 1765 IAVNCCSQTGDWEFACSVYDDMTKKGVVPDEVFLSALIDFAGHAGKVDAAFEILQEAKNQ 1586
            IAVNCCSQTGDWEFAC VY+DM KKG+ PDEVF+SALID AGHAGK+DAAFE+LQEAKN 
Sbjct: 632  IAVNCCSQTGDWEFACGVYNDMKKKGIAPDEVFISALIDVAGHAGKLDAAFELLQEAKNH 691

Query: 1585 GIRVGIIAYSSLMGACSNAKNWQMALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKS 1406
            GI  GI++YSSLMGACSNA+NWQ ALELYE++K++KLK TVST+NALIT+LC+ +QLPK+
Sbjct: 692  GINSGIVSYSSLMGACSNARNWQKALELYENIKALKLKLTVSTVNALITSLCEANQLPKA 751

Query: 1405 MEVLSDMKRLGLRLNTITFSILLVASERKDDVEVGLMLLSQAKEDGVTPSLIMFKCIIGM 1226
            MEVLS+M+  GL  NTIT+SILLVASER DD+EVGLMLLS+A++DG+ P+L+  +CIIGM
Sbjct: 752  MEVLSEMEESGLSPNTITYSILLVASERNDDLEVGLMLLSKARDDGIAPNLVTSRCIIGM 811

Query: 1225 CLRRYEKARTLGEHVLSFNSGRPQIENKWTSLALMVYREAIVAGTLPTMEVVSQVLGCLQ 1046
            CLRR+ KA  +GE VLSFNSGRP IENKWTS+AL VYRE I AGT+PTMEVVS++LGCLQ
Sbjct: 812  CLRRFVKACAVGEPVLSFNSGRPHIENKWTSVALTVYRETIDAGTVPTMEVVSKILGCLQ 871

Query: 1045 LPYNADIRDRLVENLGVNADSVRRSNLCSLIDGFGEYDPRAFSLLEEAASLGIVPCVSFK 866
            LP +  +R RLVENL V AD  R S+L SLIDGFGEYDPR+FSLLEEAAS GIVPCVSFK
Sbjct: 872  LPRDDSLRSRLVENLEVIADPSRSSSLGSLIDGFGEYDPRSFSLLEEAASFGIVPCVSFK 931

Query: 865  ESPVVVDARKLENHTATVYLLTVLKGLKHRLAAGAKLPTVTLLLPVKKMQIMSVGEEKTI 686
            ESP+VVDAR+L+ +TA VYLLT+LKGLKHRLAAGAKLP++++LLP++K QI++ G EK+I
Sbjct: 932  ESPIVVDARELQINTAEVYLLTILKGLKHRLAAGAKLPSISILLPLEKAQILTSGGEKSI 991

Query: 685  NLAERTSQXXXXXXXXXXXAYQGNESFGKIRINGLALKRWFQPKLASPFSGKPGE--LST 512
            N+A R  Q            YQGNES+GKIRINGLAL++WFQPKLASPF+GKPGE   S 
Sbjct: 992  NVAGRMGQAIAALLRRIKLPYQGNESYGKIRINGLALRKWFQPKLASPFTGKPGEWNASQ 1051

Query: 511  LQLGKVITHQQRNIRTGNLSL 449
            ++LGK I+HQQRNIRTGNLSL
Sbjct: 1052 MRLGKGISHQQRNIRTGNLSL 1072