BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00012451
         (1657 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KDO75520.1 hypothetical protein CISIN_1g003277mg [Citrus sinensis]    839   0.0  
XP_015382498.1 PREDICTED: polyadenylation and cleavage factor ho...   839   0.0  
KDO75521.1 hypothetical protein CISIN_1g003277mg [Citrus sinensi...   762   0.0  
XP_006467996.1 PREDICTED: polyadenylation and cleavage factor ho...   762   0.0  
XP_006449074.1 hypothetical protein CICLE_v10014158mg [Citrus cl...   755   0.0  
KDO75524.1 hypothetical protein CISIN_1g003277mg [Citrus sinensis]    691   0.0  
XP_006467998.1 PREDICTED: polyadenylation and cleavage factor ho...   691   0.0  
XP_011037706.1 PREDICTED: polyadenylation and cleavage factor ho...   595   0.0  
XP_012091393.1 PREDICTED: polyadenylation and cleavage factor ho...   583   0.0  
XP_011037705.1 PREDICTED: polyadenylation and cleavage factor ho...   583   0.0  
XP_011037702.1 PREDICTED: polyadenylation and cleavage factor ho...   583   0.0  
EOY28630.1 PCF11P-similar protein 4, putative isoform 1 [Theobro...   574   0.0  
OAY24701.1 hypothetical protein MANES_17G036600 [Manihot esculenta]   573   0.0  
XP_007026008.2 PREDICTED: polyadenylation and cleavage factor ho...   572   0.0  
OMO76739.1 hypothetical protein CCACVL1_15454 [Corchorus capsula...   566   0.0  
XP_002316604.2 pre-mRNA cleavage complex-related family protein ...   557   0.0  
GAV85191.1 CTD_bind domain-containing protein [Cephalotus follic...   551   0.0  
XP_002518518.1 PREDICTED: polyadenylation and cleavage factor ho...   547   0.0  
XP_017645983.1 PREDICTED: polyadenylation and cleavage factor ho...   543   e-180
XP_017645981.1 PREDICTED: polyadenylation and cleavage factor ho...   543   e-180

>KDO75520.1 hypothetical protein CISIN_1g003277mg [Citrus sinensis]
          Length = 834

 Score =  839 bits (2168), Expect = 0.0
 Identities = 424/533 (79%), Positives = 461/533 (86%), Gaps = 9/533 (1%)
 Frame = +2

Query: 5    VLAELTINSKPIITDLTIIAGEQREHGDGIAEAICARIVEVPVDQKLPSLYLLDSIVKNI 184
            VLAELT NSKPIITDLTIIAGEQR HGDGIAEAIC RI+E PV+ KLPSLYLLDSIVKNI
Sbjct: 76   VLAELTFNSKPIITDLTIIAGEQRAHGDGIAEAICTRILEAPVNHKLPSLYLLDSIVKNI 135

Query: 185  GKEYVRHFSSCLPEVFCEAYRQVHPEMYSSMRHLFGTWSTVFPQSVLQKIEAELQFSSQV 364
             KEYVR+FSS LPEVFCEAYRQVHP++YS+M+HLFGTWSTVFPQ+VL+KIEAELQFSSQV
Sbjct: 136  NKEYVRYFSSRLPEVFCEAYRQVHPDLYSAMQHLFGTWSTVFPQAVLRKIEAELQFSSQV 195

Query: 365  NKQPSNVNSPRASESPRPTHGIHVNPKYIRQLEHSDPDSNIQQVRGTSSNLNVYGQKPAI 544
            NKQ SNVNS RASESPRPTHGIHVNPKYIRQ EHS+ DSNIQQV+GTSSNL  YGQ PAI
Sbjct: 196  NKQSSNVNSLRASESPRPTHGIHVNPKYIRQFEHSNTDSNIQQVKGTSSNLKEYGQNPAI 255

Query: 545  GYDDFDSNHSEVSSSQVGGQRLNPAGGVGRASFSLGANKPHPTSTSRLGRPLSPLGIGSE 724
            GYD+FD+NH E++SSQVGGQR NPAG VGRA+F+LGANK HP+STSRLGR LSPL IGSE
Sbjct: 256  GYDEFDTNHLELTSSQVGGQRSNPAGSVGRATFALGANKLHPSSTSRLGRSLSPLAIGSE 315

Query: 725  VDEFAVENSPRGLEGASPSRSVFDYGLGRAICRNEDMSEWRNPNRFESNSIVYNISNGNE 904
             DEFAVENSPR LEG SPS  VFDYG+GRAI RNE++SEWRNPNRFES S  YN+SNG+E
Sbjct: 316  GDEFAVENSPRRLEGTSPSHPVFDYGIGRAIGRNEEVSEWRNPNRFESTSTSYNLSNGHE 375

Query: 905  HPGPRALIDAYGSDRRASNKKPLQVGCLGVNGMGNKVASRSWQNTEEEEYDWEDMSPTLV 1084
            H GPRALIDAYGSDRRASN KP QVG +G+NGMGNKVASRSWQNTEEEE+DWEDMSPTL+
Sbjct: 376  HQGPRALIDAYGSDRRASNNKPPQVGHMGINGMGNKVASRSWQNTEEEEFDWEDMSPTLL 435

Query: 1085 DRGRKNDFLSSSVPLYGSIGARYDFSKLNASSLESDIRSNHXXXXXXXXXXXXXITAEDS 1264
            DRGRKNDFL SSVPLYGS GAR DFSKLNASSLESD+R+NH             +TAEDS
Sbjct: 436  DRGRKNDFLPSSVPLYGSTGARPDFSKLNASSLESDVRTNHSSQAQLPLLDDSSVTAEDS 495

Query: 1265 VL---SGRGTGKLSGFQSEPNQNL------DYQNFPHHFSRSSHPLNGRGRGRDSQFRFP 1417
            V    SGRGTGK+SGFQSEPNQNL      +  N PHHFSRSSHP NGRGRGRDS   FP
Sbjct: 496  VSLLGSGRGTGKVSGFQSEPNQNLGSRYPQESWNLPHHFSRSSHPPNGRGRGRDSHIPFP 555

Query: 1418 GSGVPSLGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGSSGPDSISSGAWSAS 1576
            GSGVPSLG VDKAAP+IDKFV ADAQ VRPPAVVSR+GSSGPD +S+GA  +S
Sbjct: 556  GSGVPSLG-VDKAAPYIDKFVGADAQFVRPPAVVSRIGSSGPDLLSTGAIQSS 607


>XP_015382498.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
            [Citrus sinensis]
          Length = 1012

 Score =  839 bits (2168), Expect = 0.0
 Identities = 424/533 (79%), Positives = 461/533 (86%), Gaps = 9/533 (1%)
 Frame = +2

Query: 5    VLAELTINSKPIITDLTIIAGEQREHGDGIAEAICARIVEVPVDQKLPSLYLLDSIVKNI 184
            VLAELT NSKPIITDLTIIAGEQR HGDGIAEAIC RI+E PV+ KLPSLYLLDSIVKNI
Sbjct: 76   VLAELTFNSKPIITDLTIIAGEQRAHGDGIAEAICTRILEAPVNHKLPSLYLLDSIVKNI 135

Query: 185  GKEYVRHFSSCLPEVFCEAYRQVHPEMYSSMRHLFGTWSTVFPQSVLQKIEAELQFSSQV 364
             KEYVR+FSS LPEVFCEAYRQVHP++YS+M+HLFGTWSTVFPQ+VL+KIEAELQFSSQV
Sbjct: 136  NKEYVRYFSSRLPEVFCEAYRQVHPDLYSAMQHLFGTWSTVFPQAVLRKIEAELQFSSQV 195

Query: 365  NKQPSNVNSPRASESPRPTHGIHVNPKYIRQLEHSDPDSNIQQVRGTSSNLNVYGQKPAI 544
            NKQ SNVNS RASESPRPTHGIHVNPKYIRQ EHS+ DSNIQQV+GTSSNL  YGQ PAI
Sbjct: 196  NKQSSNVNSLRASESPRPTHGIHVNPKYIRQFEHSNTDSNIQQVKGTSSNLKEYGQNPAI 255

Query: 545  GYDDFDSNHSEVSSSQVGGQRLNPAGGVGRASFSLGANKPHPTSTSRLGRPLSPLGIGSE 724
            GYD+FD+NH E++SSQVGGQR NPAG VGRA+F+LGANK HP+STSRLGR LSPL IGSE
Sbjct: 256  GYDEFDTNHLELTSSQVGGQRSNPAGSVGRATFALGANKLHPSSTSRLGRSLSPLAIGSE 315

Query: 725  VDEFAVENSPRGLEGASPSRSVFDYGLGRAICRNEDMSEWRNPNRFESNSIVYNISNGNE 904
             DEFAVENSPR LEG SPS  VFDYG+GRAI RNE++SEWRNPNRFES S  YN+SNG+E
Sbjct: 316  GDEFAVENSPRRLEGTSPSHPVFDYGIGRAIGRNEEVSEWRNPNRFESTSTSYNLSNGHE 375

Query: 905  HPGPRALIDAYGSDRRASNKKPLQVGCLGVNGMGNKVASRSWQNTEEEEYDWEDMSPTLV 1084
            H GPRALIDAYGSDRRASN KP QVG +G+NGMGNKVASRSWQNTEEEE+DWEDMSPTL+
Sbjct: 376  HQGPRALIDAYGSDRRASNNKPPQVGHMGINGMGNKVASRSWQNTEEEEFDWEDMSPTLL 435

Query: 1085 DRGRKNDFLSSSVPLYGSIGARYDFSKLNASSLESDIRSNHXXXXXXXXXXXXXITAEDS 1264
            DRGRKNDFL SSVPLYGS GAR DFSKLNASSLESD+R+NH             +TAEDS
Sbjct: 436  DRGRKNDFLPSSVPLYGSTGARPDFSKLNASSLESDVRTNHSSQAQLPLLDDSSVTAEDS 495

Query: 1265 VL---SGRGTGKLSGFQSEPNQNL------DYQNFPHHFSRSSHPLNGRGRGRDSQFRFP 1417
            V    SGRGTGK+SGFQSEPNQNL      +  N PHHFSRSSHP NGRGRGRDS   FP
Sbjct: 496  VSLLGSGRGTGKVSGFQSEPNQNLGSRYPQESWNLPHHFSRSSHPPNGRGRGRDSHIPFP 555

Query: 1418 GSGVPSLGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGSSGPDSISSGAWSAS 1576
            GSGVPSLG VDKAAP+IDKFV ADAQ VRPPAVVSR+GSSGPD +S+GA  +S
Sbjct: 556  GSGVPSLG-VDKAAPYIDKFVGADAQFVRPPAVVSRIGSSGPDLLSTGAIQSS 607


>KDO75521.1 hypothetical protein CISIN_1g003277mg [Citrus sinensis] KDO75522.1
            hypothetical protein CISIN_1g003277mg [Citrus sinensis]
            KDO75523.1 hypothetical protein CISIN_1g003277mg [Citrus
            sinensis]
          Length = 797

 Score =  762 bits (1968), Expect = 0.0
 Identities = 396/533 (74%), Positives = 428/533 (80%), Gaps = 9/533 (1%)
 Frame = +2

Query: 5    VLAELTINSKPIITDLTIIAGEQREHGDGIAEAICARIVEVPVDQKLPSLYLLDSIVKNI 184
            VLAELT NSKPIITDLTIIAGEQR HGDGIAEAIC RI+E PV+ KLPSLYLLDSIVKNI
Sbjct: 76   VLAELTFNSKPIITDLTIIAGEQRAHGDGIAEAICTRILEAPVNHKLPSLYLLDSIVKNI 135

Query: 185  GKEYVRHFSSCLPEVFCEAYRQVHPEMYSSMRHLFGTWSTVFPQSVLQKIEAELQFSSQV 364
             KEYVR+FSS LPEVFCEAYRQVHP++YS+M+HLFGTWSTVFPQ+VL+KIEAELQFSSQV
Sbjct: 136  NKEYVRYFSSRLPEVFCEAYRQVHPDLYSAMQHLFGTWSTVFPQAVLRKIEAELQFSSQV 195

Query: 365  NKQPSNVNSPRASESPRPTHGIHVNPKYIRQLEHSDPDSNIQQVRGTSSNLNVYGQKPAI 544
            NKQ SNVNS RASESPRPTHGIHVNPKYIRQ EHS+ DS                     
Sbjct: 196  NKQSSNVNSLRASESPRPTHGIHVNPKYIRQFEHSNTDS--------------------- 234

Query: 545  GYDDFDSNHSEVSSSQVGGQRLNPAGGVGRASFSLGANKPHPTSTSRLGRPLSPLGIGSE 724
                            VGGQR NPAG VGRA+F+LGANK HP+STSRLGR LSPL IGSE
Sbjct: 235  ----------------VGGQRSNPAGSVGRATFALGANKLHPSSTSRLGRSLSPLAIGSE 278

Query: 725  VDEFAVENSPRGLEGASPSRSVFDYGLGRAICRNEDMSEWRNPNRFESNSIVYNISNGNE 904
             DEFAVENSPR LEG SPS  VFDYG+GRAI RNE++SEWRNPNRFES S  YN+SNG+E
Sbjct: 279  GDEFAVENSPRRLEGTSPSHPVFDYGIGRAIGRNEEVSEWRNPNRFESTSTSYNLSNGHE 338

Query: 905  HPGPRALIDAYGSDRRASNKKPLQVGCLGVNGMGNKVASRSWQNTEEEEYDWEDMSPTLV 1084
            H GPRALIDAYGSDRRASN KP QVG +G+NGMGNKVASRSWQNTEEEE+DWEDMSPTL+
Sbjct: 339  HQGPRALIDAYGSDRRASNNKPPQVGHMGINGMGNKVASRSWQNTEEEEFDWEDMSPTLL 398

Query: 1085 DRGRKNDFLSSSVPLYGSIGARYDFSKLNASSLESDIRSNHXXXXXXXXXXXXXITAEDS 1264
            DRGRKNDFL SSVPLYGS GAR DFSKLNASSLESD+R+NH             +TAEDS
Sbjct: 399  DRGRKNDFLPSSVPLYGSTGARPDFSKLNASSLESDVRTNHSSQAQLPLLDDSSVTAEDS 458

Query: 1265 VL---SGRGTGKLSGFQSEPNQNL------DYQNFPHHFSRSSHPLNGRGRGRDSQFRFP 1417
            V    SGRGTGK+SGFQSEPNQNL      +  N PHHFSRSSHP NGRGRGRDS   FP
Sbjct: 459  VSLLGSGRGTGKVSGFQSEPNQNLGSRYPQESWNLPHHFSRSSHPPNGRGRGRDSHIPFP 518

Query: 1418 GSGVPSLGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGSSGPDSISSGAWSAS 1576
            GSGVPSLG VDKAAP+IDKFV ADAQ VRPPAVVSR+GSSGPD +S+GA  +S
Sbjct: 519  GSGVPSLG-VDKAAPYIDKFVGADAQFVRPPAVVSRIGSSGPDLLSTGAIQSS 570


>XP_006467996.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
            [Citrus sinensis] XP_006467997.1 PREDICTED:
            polyadenylation and cleavage factor homolog 4 isoform X3
            [Citrus sinensis] XP_015382499.1 PREDICTED:
            polyadenylation and cleavage factor homolog 4 isoform X4
            [Citrus sinensis]
          Length = 975

 Score =  762 bits (1968), Expect = 0.0
 Identities = 396/533 (74%), Positives = 428/533 (80%), Gaps = 9/533 (1%)
 Frame = +2

Query: 5    VLAELTINSKPIITDLTIIAGEQREHGDGIAEAICARIVEVPVDQKLPSLYLLDSIVKNI 184
            VLAELT NSKPIITDLTIIAGEQR HGDGIAEAIC RI+E PV+ KLPSLYLLDSIVKNI
Sbjct: 76   VLAELTFNSKPIITDLTIIAGEQRAHGDGIAEAICTRILEAPVNHKLPSLYLLDSIVKNI 135

Query: 185  GKEYVRHFSSCLPEVFCEAYRQVHPEMYSSMRHLFGTWSTVFPQSVLQKIEAELQFSSQV 364
             KEYVR+FSS LPEVFCEAYRQVHP++YS+M+HLFGTWSTVFPQ+VL+KIEAELQFSSQV
Sbjct: 136  NKEYVRYFSSRLPEVFCEAYRQVHPDLYSAMQHLFGTWSTVFPQAVLRKIEAELQFSSQV 195

Query: 365  NKQPSNVNSPRASESPRPTHGIHVNPKYIRQLEHSDPDSNIQQVRGTSSNLNVYGQKPAI 544
            NKQ SNVNS RASESPRPTHGIHVNPKYIRQ EHS+ DS                     
Sbjct: 196  NKQSSNVNSLRASESPRPTHGIHVNPKYIRQFEHSNTDS--------------------- 234

Query: 545  GYDDFDSNHSEVSSSQVGGQRLNPAGGVGRASFSLGANKPHPTSTSRLGRPLSPLGIGSE 724
                            VGGQR NPAG VGRA+F+LGANK HP+STSRLGR LSPL IGSE
Sbjct: 235  ----------------VGGQRSNPAGSVGRATFALGANKLHPSSTSRLGRSLSPLAIGSE 278

Query: 725  VDEFAVENSPRGLEGASPSRSVFDYGLGRAICRNEDMSEWRNPNRFESNSIVYNISNGNE 904
             DEFAVENSPR LEG SPS  VFDYG+GRAI RNE++SEWRNPNRFES S  YN+SNG+E
Sbjct: 279  GDEFAVENSPRRLEGTSPSHPVFDYGIGRAIGRNEEVSEWRNPNRFESTSTSYNLSNGHE 338

Query: 905  HPGPRALIDAYGSDRRASNKKPLQVGCLGVNGMGNKVASRSWQNTEEEEYDWEDMSPTLV 1084
            H GPRALIDAYGSDRRASN KP QVG +G+NGMGNKVASRSWQNTEEEE+DWEDMSPTL+
Sbjct: 339  HQGPRALIDAYGSDRRASNNKPPQVGHMGINGMGNKVASRSWQNTEEEEFDWEDMSPTLL 398

Query: 1085 DRGRKNDFLSSSVPLYGSIGARYDFSKLNASSLESDIRSNHXXXXXXXXXXXXXITAEDS 1264
            DRGRKNDFL SSVPLYGS GAR DFSKLNASSLESD+R+NH             +TAEDS
Sbjct: 399  DRGRKNDFLPSSVPLYGSTGARPDFSKLNASSLESDVRTNHSSQAQLPLLDDSSVTAEDS 458

Query: 1265 VL---SGRGTGKLSGFQSEPNQNL------DYQNFPHHFSRSSHPLNGRGRGRDSQFRFP 1417
            V    SGRGTGK+SGFQSEPNQNL      +  N PHHFSRSSHP NGRGRGRDS   FP
Sbjct: 459  VSLLGSGRGTGKVSGFQSEPNQNLGSRYPQESWNLPHHFSRSSHPPNGRGRGRDSHIPFP 518

Query: 1418 GSGVPSLGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGSSGPDSISSGAWSAS 1576
            GSGVPSLG VDKAAP+IDKFV ADAQ VRPPAVVSR+GSSGPD +S+GA  +S
Sbjct: 519  GSGVPSLG-VDKAAPYIDKFVGADAQFVRPPAVVSRIGSSGPDLLSTGAIQSS 570


>XP_006449074.1 hypothetical protein CICLE_v10014158mg [Citrus clementina] ESR62314.1
            hypothetical protein CICLE_v10014158mg [Citrus
            clementina]
          Length = 975

 Score =  755 bits (1949), Expect = 0.0
 Identities = 395/533 (74%), Positives = 425/533 (79%), Gaps = 9/533 (1%)
 Frame = +2

Query: 5    VLAELTINSKPIITDLTIIAGEQREHGDGIAEAICARIVEVPVDQKLPSLYLLDSIVKNI 184
            VLAELT NSKPIITDLTIIAGEQR HGDGIAEAIC RI+E PV+ KLPSLYLLDSIVKNI
Sbjct: 76   VLAELTFNSKPIITDLTIIAGEQRAHGDGIAEAICTRILEAPVNHKLPSLYLLDSIVKNI 135

Query: 185  GKEYVRHFSSCLPEVFCEAYRQVHPEMYSSMRHLFGTWSTVFPQSVLQKIEAELQFSSQV 364
             KEYVR+FSS LPEVFCEAYRQVHP++YS+M+HLFGTWSTVFPQ+VL KIEAELQFSSQV
Sbjct: 136  NKEYVRYFSSRLPEVFCEAYRQVHPDLYSAMQHLFGTWSTVFPQAVLHKIEAELQFSSQV 195

Query: 365  NKQPSNVNSPRASESPRPTHGIHVNPKYIRQLEHSDPDSNIQQVRGTSSNLNVYGQKPAI 544
            NKQ SNVNS RASESPRPTHGIHVNPKYIRQ EHS+ DS                     
Sbjct: 196  NKQSSNVNSLRASESPRPTHGIHVNPKYIRQFEHSNTDS--------------------- 234

Query: 545  GYDDFDSNHSEVSSSQVGGQRLNPAGGVGRASFSLGANKPHPTSTSRLGRPLSPLGIGSE 724
                            VGGQR NPAG VGRA+F+LGANK HP+STSRLGR LSPLGIGSE
Sbjct: 235  ----------------VGGQRSNPAGSVGRATFALGANKLHPSSTSRLGRSLSPLGIGSE 278

Query: 725  VDEFAVENSPRGLEGASPSRSVFDYGLGRAICRNEDMSEWRNPNRFESNSIVYNISNGNE 904
             DEFAVENSPR LEG SPS  VFDYG+GRAI RNE++SEWRNPNRFES S  YN+SNG+E
Sbjct: 279  GDEFAVENSPRRLEGTSPSHPVFDYGIGRAIGRNEEVSEWRNPNRFESTSTSYNLSNGHE 338

Query: 905  HPGPRALIDAYGSDRRASNKKPLQVGCLGVNGMGNKVASRSWQNTEEEEYDWEDMSPTLV 1084
            H GPRALIDAYGSDRRASN KP QVG +G+NGMGNKVASRSWQNTEEEE+DWEDMSPTL+
Sbjct: 339  HQGPRALIDAYGSDRRASNNKPSQVGHMGINGMGNKVASRSWQNTEEEEFDWEDMSPTLL 398

Query: 1085 DRGRKNDFLSSSVPLYGSIGARYDFSKLNASSLESDIRSNHXXXXXXXXXXXXXITAEDS 1264
            DRGRK DFL SSVPLYGS GAR DFSKLNASSLESDIR+NH             +TAEDS
Sbjct: 399  DRGRKFDFLPSSVPLYGSTGARPDFSKLNASSLESDIRTNHSSQAQLPLLDDSSVTAEDS 458

Query: 1265 VL---SGRGTGKLSGFQSEPNQNL------DYQNFPHHFSRSSHPLNGRGRGRDSQFRFP 1417
            V    SGRGTGK+SGFQSEPNQNL      +  N PH FSRSSHP NGRGRGRDS   FP
Sbjct: 459  VSLLGSGRGTGKVSGFQSEPNQNLGSRYPQESWNLPHPFSRSSHPPNGRGRGRDSHIPFP 518

Query: 1418 GSGVPSLGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGSSGPDSISSGAWSAS 1576
            GSGVPSLG VDKAAP+IDKFV ADA  VRPPAVVSR+GSSGPD +S+GA  +S
Sbjct: 519  GSGVPSLG-VDKAAPYIDKFVGADALFVRPPAVVSRIGSSGPDLLSTGAIQSS 570


>KDO75524.1 hypothetical protein CISIN_1g003277mg [Citrus sinensis]
          Length = 763

 Score =  691 bits (1784), Expect = 0.0
 Identities = 368/533 (69%), Positives = 398/533 (74%), Gaps = 9/533 (1%)
 Frame = +2

Query: 5    VLAELTINSKPIITDLTIIAGEQREHGDGIAEAICARIVEVPVDQKLPSLYLLDSIVKNI 184
            VLAELT NSKPIITDLTIIAGEQR HGDGIAEAIC RI+EV                   
Sbjct: 76   VLAELTFNSKPIITDLTIIAGEQRAHGDGIAEAICTRILEV------------------- 116

Query: 185  GKEYVRHFSSCLPEVFCEAYRQVHPEMYSSMRHLFGTWSTVFPQSVLQKIEAELQFSSQV 364
                           FCEAYRQVHP++YS+M+HLFGTWSTVFPQ+VL+KIEAELQFSSQV
Sbjct: 117  ---------------FCEAYRQVHPDLYSAMQHLFGTWSTVFPQAVLRKIEAELQFSSQV 161

Query: 365  NKQPSNVNSPRASESPRPTHGIHVNPKYIRQLEHSDPDSNIQQVRGTSSNLNVYGQKPAI 544
            NKQ SNVNS RASESPRPTHGIHVNPKYIRQ EHS+ DS                     
Sbjct: 162  NKQSSNVNSLRASESPRPTHGIHVNPKYIRQFEHSNTDS--------------------- 200

Query: 545  GYDDFDSNHSEVSSSQVGGQRLNPAGGVGRASFSLGANKPHPTSTSRLGRPLSPLGIGSE 724
                            VGGQR NPAG VGRA+F+LGANK HP+STSRLGR LSPL IGSE
Sbjct: 201  ----------------VGGQRSNPAGSVGRATFALGANKLHPSSTSRLGRSLSPLAIGSE 244

Query: 725  VDEFAVENSPRGLEGASPSRSVFDYGLGRAICRNEDMSEWRNPNRFESNSIVYNISNGNE 904
             DEFAVENSPR LEG SPS  VFDYG+GRAI RNE++SEWRNPNRFES S  YN+SNG+E
Sbjct: 245  GDEFAVENSPRRLEGTSPSHPVFDYGIGRAIGRNEEVSEWRNPNRFESTSTSYNLSNGHE 304

Query: 905  HPGPRALIDAYGSDRRASNKKPLQVGCLGVNGMGNKVASRSWQNTEEEEYDWEDMSPTLV 1084
            H GPRALIDAYGSDRRASN KP QVG +G+NGMGNKVASRSWQNTEEEE+DWEDMSPTL+
Sbjct: 305  HQGPRALIDAYGSDRRASNNKPPQVGHMGINGMGNKVASRSWQNTEEEEFDWEDMSPTLL 364

Query: 1085 DRGRKNDFLSSSVPLYGSIGARYDFSKLNASSLESDIRSNHXXXXXXXXXXXXXITAEDS 1264
            DRGRKNDFL SSVPLYGS GAR DFSKLNASSLESD+R+NH             +TAEDS
Sbjct: 365  DRGRKNDFLPSSVPLYGSTGARPDFSKLNASSLESDVRTNHSSQAQLPLLDDSSVTAEDS 424

Query: 1265 VL---SGRGTGKLSGFQSEPNQNL------DYQNFPHHFSRSSHPLNGRGRGRDSQFRFP 1417
            V    SGRGTGK+SGFQSEPNQNL      +  N PHHFSRSSHP NGRGRGRDS   FP
Sbjct: 425  VSLLGSGRGTGKVSGFQSEPNQNLGSRYPQESWNLPHHFSRSSHPPNGRGRGRDSHIPFP 484

Query: 1418 GSGVPSLGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGSSGPDSISSGAWSAS 1576
            GSGVPSLG VDKAAP+IDKFV ADAQ VRPPAVVSR+GSSGPD +S+GA  +S
Sbjct: 485  GSGVPSLG-VDKAAPYIDKFVGADAQFVRPPAVVSRIGSSGPDLLSTGAIQSS 536


>XP_006467998.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X5
            [Citrus sinensis]
          Length = 941

 Score =  691 bits (1784), Expect = 0.0
 Identities = 368/533 (69%), Positives = 398/533 (74%), Gaps = 9/533 (1%)
 Frame = +2

Query: 5    VLAELTINSKPIITDLTIIAGEQREHGDGIAEAICARIVEVPVDQKLPSLYLLDSIVKNI 184
            VLAELT NSKPIITDLTIIAGEQR HGDGIAEAIC RI+EV                   
Sbjct: 76   VLAELTFNSKPIITDLTIIAGEQRAHGDGIAEAICTRILEV------------------- 116

Query: 185  GKEYVRHFSSCLPEVFCEAYRQVHPEMYSSMRHLFGTWSTVFPQSVLQKIEAELQFSSQV 364
                           FCEAYRQVHP++YS+M+HLFGTWSTVFPQ+VL+KIEAELQFSSQV
Sbjct: 117  ---------------FCEAYRQVHPDLYSAMQHLFGTWSTVFPQAVLRKIEAELQFSSQV 161

Query: 365  NKQPSNVNSPRASESPRPTHGIHVNPKYIRQLEHSDPDSNIQQVRGTSSNLNVYGQKPAI 544
            NKQ SNVNS RASESPRPTHGIHVNPKYIRQ EHS+ DS                     
Sbjct: 162  NKQSSNVNSLRASESPRPTHGIHVNPKYIRQFEHSNTDS--------------------- 200

Query: 545  GYDDFDSNHSEVSSSQVGGQRLNPAGGVGRASFSLGANKPHPTSTSRLGRPLSPLGIGSE 724
                            VGGQR NPAG VGRA+F+LGANK HP+STSRLGR LSPL IGSE
Sbjct: 201  ----------------VGGQRSNPAGSVGRATFALGANKLHPSSTSRLGRSLSPLAIGSE 244

Query: 725  VDEFAVENSPRGLEGASPSRSVFDYGLGRAICRNEDMSEWRNPNRFESNSIVYNISNGNE 904
             DEFAVENSPR LEG SPS  VFDYG+GRAI RNE++SEWRNPNRFES S  YN+SNG+E
Sbjct: 245  GDEFAVENSPRRLEGTSPSHPVFDYGIGRAIGRNEEVSEWRNPNRFESTSTSYNLSNGHE 304

Query: 905  HPGPRALIDAYGSDRRASNKKPLQVGCLGVNGMGNKVASRSWQNTEEEEYDWEDMSPTLV 1084
            H GPRALIDAYGSDRRASN KP QVG +G+NGMGNKVASRSWQNTEEEE+DWEDMSPTL+
Sbjct: 305  HQGPRALIDAYGSDRRASNNKPPQVGHMGINGMGNKVASRSWQNTEEEEFDWEDMSPTLL 364

Query: 1085 DRGRKNDFLSSSVPLYGSIGARYDFSKLNASSLESDIRSNHXXXXXXXXXXXXXITAEDS 1264
            DRGRKNDFL SSVPLYGS GAR DFSKLNASSLESD+R+NH             +TAEDS
Sbjct: 365  DRGRKNDFLPSSVPLYGSTGARPDFSKLNASSLESDVRTNHSSQAQLPLLDDSSVTAEDS 424

Query: 1265 VL---SGRGTGKLSGFQSEPNQNL------DYQNFPHHFSRSSHPLNGRGRGRDSQFRFP 1417
            V    SGRGTGK+SGFQSEPNQNL      +  N PHHFSRSSHP NGRGRGRDS   FP
Sbjct: 425  VSLLGSGRGTGKVSGFQSEPNQNLGSRYPQESWNLPHHFSRSSHPPNGRGRGRDSHIPFP 484

Query: 1418 GSGVPSLGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGSSGPDSISSGAWSAS 1576
            GSGVPSLG VDKAAP+IDKFV ADAQ VRPPAVVSR+GSSGPD +S+GA  +S
Sbjct: 485  GSGVPSLG-VDKAAPYIDKFVGADAQFVRPPAVVSRIGSSGPDLLSTGAIQSS 536


>XP_011037706.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X5 [Populus euphratica]
          Length = 1035

 Score =  595 bits (1533), Expect = 0.0
 Identities = 331/557 (59%), Positives = 391/557 (70%), Gaps = 26/557 (4%)
 Frame = +2

Query: 5    VLAELTINSKPIITDLTIIAGEQREHGDGIAEAICARIVEVPVDQKLPSLYLLDSIVKNI 184
            VL ELT NSKPIITDLTIIAGEQREHG+GIA+ +CARIVE PVDQKLPSLYLLDSIVKNI
Sbjct: 78   VLNELTFNSKPIITDLTIIAGEQREHGEGIADVLCARIVEAPVDQKLPSLYLLDSIVKNI 137

Query: 185  GKEYVRHFSSCLPEVFCEAYRQVHPEMYSSMRHLFGTWSTVFPQSVLQKIEAELQFSSQV 364
            G+EY+RHFSS LPEVFCEAYRQV P +Y SMRHLFGTWS+VFP SVL KIE +L FS QV
Sbjct: 138  GREYIRHFSSRLPEVFCEAYRQVDPSLYPSMRHLFGTWSSVFPSSVLHKIETQLDFSPQV 197

Query: 365  NKQPSNVNSPRASESPRPTHGIHVNPKYIRQLEHSDPDSNIQQVRGTSSNLNVYGQKPAI 544
            N Q S++ S RASESPRP HGIHVNPKY+RQL+HS  D+N+Q  +GT SNL +YG+KPA+
Sbjct: 198  NNQSSSLTSFRASESPRPPHGIHVNPKYLRQLDHSTADNNVQHTKGT-SNLKIYGKKPAV 256

Query: 545  GYDDFDSNHSEVSSSQVGGQRLNPAGGVGRASFSLGANKPHPTSTSRLGRPLSPLGIG-- 718
            GYD+++S+ +E  SSQV         G+GR S  LG+NK  P+STSRL R L PL  G  
Sbjct: 257  GYDEYESDQAEAISSQV---------GMGRTSLILGSNKLQPSSTSRLARRLLPLTTGAE 307

Query: 719  ----SEVDEFAVENSPRG-LEGASPSRSVFDYGLGRAICRNEDMSEWR-------NPNRF 862
                SE+D+ AV NSPR  +EG SPSR +FDYG  R I R+E+ +E R       N NRF
Sbjct: 308  RPLSSEIDDLAVGNSPRRFVEGLSPSRPLFDYGHSRTIVRDEEANELRRNNYSDDNHNRF 367

Query: 863  ESNSIVYNISNGNEHPGPRALIDAYGSDR--RASNKKPLQVGCLGVNGMGNKVASRSWQN 1036
            E  S  Y +SNG EH GPRALIDAYG DR  R ++ KPL +  L VNGM NKVASRSWQN
Sbjct: 368  EP-SARYRLSNGLEHQGPRALIDAYGDDRGKRITSSKPLHIEQLAVNGMHNKVASRSWQN 426

Query: 1037 TEEEEYDWEDMSPTLVDRGRKNDFLSSSVPLYGSIGARYDFSKLNASSLESDIRSNHXXX 1216
            TEEEE+DWEDMSPTL + GR NDFL SS+P +GS+  R  F +L+A   ESDIRSN    
Sbjct: 427  TEEEEFDWEDMSPTLSEHGRTNDFLPSSIPPFGSVVPRPAFGRLSAIHAESDIRSNRSSL 486

Query: 1217 XXXXXXXXXXITAEDSVL---SGRG-TGKLSGFQSEPNQNL------DYQNFPHHFSRSS 1366
                        AE++V    SGRG T K+ GF++E NQ L      +  NFP H  +S+
Sbjct: 487  APMASVDGSSNIAEEAVSILGSGRGSTSKIPGFRTERNQILGSRHHQEAWNFPPHIHQSA 546

Query: 1367 HPLNGRGRGRDSQFRFPGSGVPSLGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGSSGPD 1546
            H LN +GRGRD Q    GSGV SLG  +  +P  +K  D DAQL R PA+ SR GS+  D
Sbjct: 547  HLLNSKGRGRDFQMPLSGSGVSSLG-GENYSPLAEKLPDIDAQLNRSPAIASRWGSN-ID 604

Query: 1547 SISSGAWSASIPSGSGV 1597
            S SSG WS+ +P  SGV
Sbjct: 605  STSSGTWSSVVPPSSGV 621


>XP_012091393.1 PREDICTED: polyadenylation and cleavage factor homolog 4 [Jatropha
            curcas] KDP20781.1 hypothetical protein JCGZ_21252
            [Jatropha curcas]
          Length = 1029

 Score =  583 bits (1504), Expect = 0.0
 Identities = 330/553 (59%), Positives = 394/553 (71%), Gaps = 32/553 (5%)
 Frame = +2

Query: 5    VLAELTINSKPIITDLTIIAGEQREHGDGIAEAICARIVEVPVDQKLPSLYLLDSIVKNI 184
            VL ELT NSKPIITDLTIIAGE RE G+GIA+AICARI+EVPV+QKLPSLYLLDSIVKNI
Sbjct: 74   VLDELTFNSKPIITDLTIIAGELREQGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNI 133

Query: 185  GKEYVRHFSSCLPEVFCEAYRQVHPEMYSSMRHLFGTWSTVFPQSVLQKIEAELQFSSQV 364
            G++YVR+FS+ LPEVFCEAYRQVHP +Y SMRHLFGTWS+VFP SVL KIE +LQFS QV
Sbjct: 134  GRDYVRYFSTRLPEVFCEAYRQVHPNLYPSMRHLFGTWSSVFPPSVLGKIETQLQFSPQV 193

Query: 365  NKQPSNVNSPRASESPRPTHGIHVNPKYIRQLEHSDPDSNIQQ-VRGTSSNLNVYGQKPA 541
            N Q S ++S +AS+SPRPTHGIHVNPKY+RQLE+S  D+N QQ VRG SS L VYGQKPA
Sbjct: 194  NSQSSGLSSLKASDSPRPTHGIHVNPKYLRQLENSTSDNNAQQHVRGASSTLKVYGQKPA 253

Query: 542  IGYDDFDSNHSEVSSSQVGGQRLN---PAGGVGRASFSLGANKPHPTSTSRLGRPLSPLG 712
            I YD++DS+H+EV+SSQVG QRLN     G VG  SF LGANK + +S+SRL R  +P  
Sbjct: 254  IAYDEYDSDHAEVTSSQVGAQRLNTVGTVGTVGHTSFMLGANKLYASSSSRLARH-APSS 312

Query: 713  IG------SEVDEFAVENSPRG-LEGASPSRSVFDYGLGRAICRNEDMSEWRN------- 850
            +G      SEVD+FA+ NSPR  +EGASPS  +FDYG  R I R+E+ ++WR        
Sbjct: 313  VGAERPLPSEVDDFAMGNSPRRFVEGASPSHPLFDYGPSRPIARDEETTDWRRKHYSDDI 372

Query: 851  PNRFESNSIVYNISNGNEHPGPRALIDAYGSDRRA--SNKKPLQVGCLGVNGMGNKVASR 1024
             NR E+ S+ Y++SNG+EH GPRALIDAYG D+R+  SN KPLQ+  L V+GM NKVA R
Sbjct: 373  QNRLET-SVAYSLSNGHEHQGPRALIDAYGEDKRSRVSNSKPLQIDRLDVDGMVNKVAPR 431

Query: 1025 SWQNTEEEEYDWEDMSPTLVDRGRKNDFLSSSVPLYGSIGARYDFSKLNASSLESDIRSN 1204
             WQNTEEEE+DWEDMSPTL DR R NDFLSSSVP +G +G R  F     S L+SDIRSN
Sbjct: 432  LWQNTEEEEFDWEDMSPTLADRNRSNDFLSSSVPPFGGVGTRPGFGTRGPSQLDSDIRSN 491

Query: 1205 HXXXXXXXXXXXXXITAEDSVL---SGRG-TGKLSGFQSEPNQNLDYQNFP-------HH 1351
                            AEDS+    SGRG T KL GFQ E NQ +   ++P       +H
Sbjct: 492  RSAQAQLSLIDDSSDIAEDSIPILGSGRGSTAKLPGFQPERNQ-IMASHYPREAWKLLNH 550

Query: 1352 FSRSSHPLNGRGRGRDSQFRFPGS-GVPSLGVVDKAAPFIDKFVDADAQLVRPPAVVSRM 1528
            + +S+  LN +GR R  +FR P S  V S  V D  AP +DK  D D Q VRPP + SR+
Sbjct: 551  YPQST-DLNAKGRNR--EFRMPFSRSVISSSVSDSLAPLVDKLPDTDGQYVRPPTLPSRV 607

Query: 1529 GSSGPDSISSGAW 1567
            GSS   S ++G W
Sbjct: 608  GSSIAPS-TAGVW 619


>XP_011037705.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X4 [Populus euphratica]
          Length = 1051

 Score =  583 bits (1504), Expect = 0.0
 Identities = 331/575 (57%), Positives = 391/575 (68%), Gaps = 44/575 (7%)
 Frame = +2

Query: 5    VLAELTINSKPIITDLTIIAGEQREHGDGIAEAICARIVEVPVDQKLPSLYLLDSIVKNI 184
            VL ELT NSKPIITDLTIIAGEQREHG+GIA+ +CARIVE PVDQKLPSLYLLDSIVKNI
Sbjct: 78   VLNELTFNSKPIITDLTIIAGEQREHGEGIADVLCARIVEAPVDQKLPSLYLLDSIVKNI 137

Query: 185  GKEYVRHFSSCLPEVFCEAYRQVHPEMYSSMRHLFGTWSTVFPQSVLQKIEAELQFSSQV 364
            G+EY+RHFSS LPEVFCEAYRQV P +Y SMRHLFGTWS+VFP SVL KIE +L FS QV
Sbjct: 138  GREYIRHFSSRLPEVFCEAYRQVDPSLYPSMRHLFGTWSSVFPSSVLHKIETQLDFSPQV 197

Query: 365  NKQPSNVNSPRASESPRPTHGIHVNPKYIRQLEHSDPDS------------------NIQ 490
            N Q S++ S RASESPRP HGIHVNPKY+RQL+HS  D+                  N+Q
Sbjct: 198  NNQSSSLTSFRASESPRPPHGIHVNPKYLRQLDHSTADNTGWSILTSKAKNVIQSLQNVQ 257

Query: 491  QVRGTSSNLNVYGQKPAIGYDDFDSNHSEVSSSQVGGQRLNPAGGVGRASFSLGANKPHP 670
              +GT SNL +YG+KPA+GYD+++S+ +E  SSQV         G+GR S  LG+NK  P
Sbjct: 258  HTKGT-SNLKIYGKKPAVGYDEYESDQAEAISSQV---------GMGRTSLILGSNKLQP 307

Query: 671  TSTSRLGRPLSPLGIG------SEVDEFAVENSPRG-LEGASPSRSVFDYGLGRAICRNE 829
            +STSRL R L PL  G      SE+D+ AV NSPR  +EG SPSR +FDYG  R I R+E
Sbjct: 308  SSTSRLARRLLPLTTGAERPLSSEIDDLAVGNSPRRFVEGLSPSRPLFDYGHSRTIVRDE 367

Query: 830  DMSEWR-------NPNRFESNSIVYNISNGNEHPGPRALIDAYGSDR--RASNKKPLQVG 982
            + +E R       N NRFE  S  Y +SNG EH GPRALIDAYG DR  R ++ KPL + 
Sbjct: 368  EANELRRNNYSDDNHNRFEP-SARYRLSNGLEHQGPRALIDAYGDDRGKRITSSKPLHIE 426

Query: 983  CLGVNGMGNKVASRSWQNTEEEEYDWEDMSPTLVDRGRKNDFLSSSVPLYGSIGARYDFS 1162
             L VNGM NKVASRSWQNTEEEE+DWEDMSPTL + GR NDFL SS+P +GS+  R  F 
Sbjct: 427  QLAVNGMHNKVASRSWQNTEEEEFDWEDMSPTLSEHGRTNDFLPSSIPPFGSVVPRPAFG 486

Query: 1163 KLNASSLESDIRSNHXXXXXXXXXXXXXITAEDSVL---SGRG-TGKLSGFQSEPNQNL- 1327
            +L+A   ESDIRSN                AE++V    SGRG T K+ GF++E NQ L 
Sbjct: 487  RLSAIHAESDIRSNRSSLAPMASVDGSSNIAEEAVSILGSGRGSTSKIPGFRTERNQILG 546

Query: 1328 -----DYQNFPHHFSRSSHPLNGRGRGRDSQFRFPGSGVPSLGVVDKAAPFIDKFVDADA 1492
                 +  NFP H  +S+H LN +GRGRD Q    GSGV SLG  +  +P  +K  D DA
Sbjct: 547  SRHHQEAWNFPPHIHQSAHLLNSKGRGRDFQMPLSGSGVSSLG-GENYSPLAEKLPDIDA 605

Query: 1493 QLVRPPAVVSRMGSSGPDSISSGAWSASIPSGSGV 1597
            QL R PA+ SR GS+  DS SSG WS+ +P  SGV
Sbjct: 606  QLNRSPAIASRWGSN-IDSTSSGTWSSVVPPSSGV 639


>XP_011037702.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X1 [Populus euphratica] XP_011037703.1 PREDICTED:
            polyadenylation and cleavage factor homolog 4-like
            isoform X2 [Populus euphratica] XP_011037704.1 PREDICTED:
            polyadenylation and cleavage factor homolog 4-like
            isoform X3 [Populus euphratica]
          Length = 1053

 Score =  583 bits (1504), Expect = 0.0
 Identities = 331/575 (57%), Positives = 391/575 (68%), Gaps = 44/575 (7%)
 Frame = +2

Query: 5    VLAELTINSKPIITDLTIIAGEQREHGDGIAEAICARIVEVPVDQKLPSLYLLDSIVKNI 184
            VL ELT NSKPIITDLTIIAGEQREHG+GIA+ +CARIVE PVDQKLPSLYLLDSIVKNI
Sbjct: 78   VLNELTFNSKPIITDLTIIAGEQREHGEGIADVLCARIVEAPVDQKLPSLYLLDSIVKNI 137

Query: 185  GKEYVRHFSSCLPEVFCEAYRQVHPEMYSSMRHLFGTWSTVFPQSVLQKIEAELQFSSQV 364
            G+EY+RHFSS LPEVFCEAYRQV P +Y SMRHLFGTWS+VFP SVL KIE +L FS QV
Sbjct: 138  GREYIRHFSSRLPEVFCEAYRQVDPSLYPSMRHLFGTWSSVFPSSVLHKIETQLDFSPQV 197

Query: 365  NKQPSNVNSPRASESPRPTHGIHVNPKYIRQLEHSDPDS------------------NIQ 490
            N Q S++ S RASESPRP HGIHVNPKY+RQL+HS  D+                  N+Q
Sbjct: 198  NNQSSSLTSFRASESPRPPHGIHVNPKYLRQLDHSTADNTGWSILTSKAKNVIQSLQNVQ 257

Query: 491  QVRGTSSNLNVYGQKPAIGYDDFDSNHSEVSSSQVGGQRLNPAGGVGRASFSLGANKPHP 670
              +GT SNL +YG+KPA+GYD+++S+ +E  SSQV         G+GR S  LG+NK  P
Sbjct: 258  HTKGT-SNLKIYGKKPAVGYDEYESDQAEAISSQV---------GMGRTSLILGSNKLQP 307

Query: 671  TSTSRLGRPLSPLGIG------SEVDEFAVENSPRG-LEGASPSRSVFDYGLGRAICRNE 829
            +STSRL R L PL  G      SE+D+ AV NSPR  +EG SPSR +FDYG  R I R+E
Sbjct: 308  SSTSRLARRLLPLTTGAERPLSSEIDDLAVGNSPRRFVEGLSPSRPLFDYGHSRTIVRDE 367

Query: 830  DMSEWR-------NPNRFESNSIVYNISNGNEHPGPRALIDAYGSDR--RASNKKPLQVG 982
            + +E R       N NRFE  S  Y +SNG EH GPRALIDAYG DR  R ++ KPL + 
Sbjct: 368  EANELRRNNYSDDNHNRFEP-SARYRLSNGLEHQGPRALIDAYGDDRGKRITSSKPLHIE 426

Query: 983  CLGVNGMGNKVASRSWQNTEEEEYDWEDMSPTLVDRGRKNDFLSSSVPLYGSIGARYDFS 1162
             L VNGM NKVASRSWQNTEEEE+DWEDMSPTL + GR NDFL SS+P +GS+  R  F 
Sbjct: 427  QLAVNGMHNKVASRSWQNTEEEEFDWEDMSPTLSEHGRTNDFLPSSIPPFGSVVPRPAFG 486

Query: 1163 KLNASSLESDIRSNHXXXXXXXXXXXXXITAEDSVL---SGRG-TGKLSGFQSEPNQNL- 1327
            +L+A   ESDIRSN                AE++V    SGRG T K+ GF++E NQ L 
Sbjct: 487  RLSAIHAESDIRSNRSSLAPMASVDGSSNIAEEAVSILGSGRGSTSKIPGFRTERNQILG 546

Query: 1328 -----DYQNFPHHFSRSSHPLNGRGRGRDSQFRFPGSGVPSLGVVDKAAPFIDKFVDADA 1492
                 +  NFP H  +S+H LN +GRGRD Q    GSGV SLG  +  +P  +K  D DA
Sbjct: 547  SRHHQEAWNFPPHIHQSAHLLNSKGRGRDFQMPLSGSGVSSLG-GENYSPLAEKLPDIDA 605

Query: 1493 QLVRPPAVVSRMGSSGPDSISSGAWSASIPSGSGV 1597
            QL R PA+ SR GS+  DS SSG WS+ +P  SGV
Sbjct: 606  QLNRSPAIASRWGSN-IDSTSSGTWSSVVPPSSGV 639


>EOY28630.1 PCF11P-similar protein 4, putative isoform 1 [Theobroma cacao]
          Length = 1004

 Score =  574 bits (1479), Expect = 0.0
 Identities = 327/563 (58%), Positives = 383/563 (68%), Gaps = 20/563 (3%)
 Frame = +2

Query: 2    AVLAELTINSKPIITDLTIIAGEQREHGDGIAEAICARIVEVPVDQKLPSLYLLDSIVKN 181
            AVL+ELT NSKPIITDLTIIAGEQREHG+GIA+AICARI+EVPV+QKLPSLYLLDSIVKN
Sbjct: 55   AVLSELTFNSKPIITDLTIIAGEQREHGEGIADAICARILEVPVEQKLPSLYLLDSIVKN 114

Query: 182  IGKEYVRHFSSCLPEVFCEAYRQVHPEMYSSMRHLFGTWSTVFPQSVLQKIEAELQFSSQ 361
            IG+EYVRHFSS LPEVFCEAYRQV+P +Y +MRHLFGTWSTVFP SVL+KIE +LQFS  
Sbjct: 115  IGREYVRHFSSRLPEVFCEAYRQVNPNLYPAMRHLFGTWSTVFPPSVLRKIEIQLQFSQS 174

Query: 362  VNKQPSNVNSPRASESPRPTHGIHVNPKYIRQLE-HSDPDSNIQQVRGTSSNLNVYGQKP 538
             N+Q   V S R+SESPRPTHGIHVNPKY+RQLE  S  DSN Q VRGTS+ L VYGQK 
Sbjct: 175  ANQQSPGVTSLRSSESPRPTHGIHVNPKYLRQLEQQSGADSNTQHVRGTSAALKVYGQKH 234

Query: 539  AIGYDDFDSNHSEVSSSQVGGQRLNPAGGVGRASFSLGANKPHPTSTSRLGRPLSPLGIG 718
            +IG+D+FDS+H+EV SS VG +RL   G VGR S  +GANK    S S + RP SP  IG
Sbjct: 235  SIGFDEFDSDHTEVPSSHVGVRRLRSTGNVGRTSVVVGANK----SASIVSRPFSPSRIG 290

Query: 719  ------SEVDEFAVENSPRG-LEGASPSRSVFDYGLGRAICRNEDMSEWRNP-------N 856
                  SEVD+   + SPR  +EG SPSR VFDYG GRAI R+E+  EW+         N
Sbjct: 291  SDRLVLSEVDDLPSDGSPRRFVEGTSPSRPVFDYGRGRAIVRDEETREWQRKHSYDDYHN 350

Query: 857  RFESNSIVYNISNGNEHPGPRALIDAYGSDR--RASNKKPLQVGCLGVNGMGNKVASRSW 1030
            R ES+   Y +SNG+E   PRALIDAYG+DR    SN KP QV  L VNGMGNKV   SW
Sbjct: 351  RSESSLNAYKLSNGHERQTPRALIDAYGNDRGKGISNSKPAQVERLAVNGMGNKVTPISW 410

Query: 1031 QNTEEEEYDWEDMSPTLVDRGRKNDFLSSSVPLYGSIGARYDFSKLNASSLESDIRSNHX 1210
            QNTEEEE+DWEDMSPTL DR R NDF  SSVP +GSIG R        + LES+ RS+  
Sbjct: 411  QNTEEEEFDWEDMSPTLADRSRSNDFSLSSVPPFGSIGER-------PAGLESNSRSSRA 463

Query: 1211 XXXXXXXXXXXXI---TAEDSVLSGRGTGKLSGFQSEPNQNLDYQNFPHHFSRSSHPLNG 1381
                             A  S+ SGRG+ ++       +   +  N  +HFS+ S  L+ 
Sbjct: 464  TQTQLPLVDDSSTIPKNAVSSLSSGRGSSQI----LHSHHPQEAWNSSYHFSQPSRNLHA 519

Query: 1382 RGRGRDSQFRFPGSGVPSLGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGSSGPDSISSG 1561
            +GRGRD Q  F  SG+ SLG  +K  P IDK  D  +Q +RPPAVV R GSS  DS++ G
Sbjct: 520  KGRGRDFQIPFSASGIQSLG-GEKIVPLIDKLPDGGSQFLRPPAVVPRTGSSSLDSVTVG 578

Query: 1562 AWSASIPSGSGVPSLGVVDKAAP 1630
            A  A IPS +GV     V K+ P
Sbjct: 579  ARPAIIPSTTGVWPPVNVHKSQP 601


>OAY24701.1 hypothetical protein MANES_17G036600 [Manihot esculenta]
          Length = 1027

 Score =  573 bits (1478), Expect = 0.0
 Identities = 312/547 (57%), Positives = 385/547 (70%), Gaps = 26/547 (4%)
 Frame = +2

Query: 5    VLAELTINSKPIITDLTIIAGEQREHGDGIAEAICARIVEVPVDQKLPSLYLLDSIVKNI 184
            +L ELT NSKP+I DLTI+AGE REHG+GIA+AICARI+EVPV+QKLPSLYLLDSIVKNI
Sbjct: 75   MLDELTFNSKPLINDLTIVAGELREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNI 134

Query: 185  GKEYVRHFSSCLPEVFCEAYRQVHPEMYSSMRHLFGTWSTVFPQSVLQKIEAELQFSSQV 364
            G+EYVRHFSS LPEVFCEAYRQ+HP +Y SMRHLFGTWSTVFP SVL+KIE +LQFS QV
Sbjct: 135  GREYVRHFSSRLPEVFCEAYRQIHPNLYHSMRHLFGTWSTVFPPSVLRKIETQLQFSPQV 194

Query: 365  NKQPSNVNSPRASESPRPTHGIHVNPKYIRQLEHSDPDSNIQQVRGTSSNLNVYGQKPAI 544
            N Q S + S +AS+S RPTHGIHVNPKY+RQLEHS  D+N Q VRG SS + +Y QKPAI
Sbjct: 195  NSQSSGLPSLKASDSSRPTHGIHVNPKYLRQLEHSS-DNNAQNVRGASSTIKIYSQKPAI 253

Query: 545  GYDDFDSNHSEVSSSQVGGQRLNPAGGVGRASFSLGANKPHPTSTSRLGRPLSPLGIG-- 718
            GYD++DS+H+E++SSQVGGQRL+ AG VG  SF+LGANK HP+S+SRL R +SP  +G  
Sbjct: 254  GYDEYDSDHAEITSSQVGGQRLSTAGSVGHTSFTLGANKLHPSSSSRLARRISPSSVGAE 313

Query: 719  ----SEVDEFAVENSPRG-LEGASPSRSVFDYGLGRAICRNEDMSEWR-------NPNRF 862
                SEVD+FA  NSP+  ++GA+ S  V +YG  R I R+E+ +EWR       N NR 
Sbjct: 314  RPLPSEVDDFAAGNSPQSFVDGAASSHPVLNYGSLRVIGRDEETNEWRRKHYSDDNHNRL 373

Query: 863  ESNSIVYNISNGNEHPGPRALIDAYGSDR--RASNKKPLQVGCLGVNGMGNKVASRSWQN 1036
            E+ SI Y +SNG+E  GPRALIDAYG DR  R +N    Q+G + ++GM N+V  RSWQN
Sbjct: 374  EA-SIAYGLSNGHERQGPRALIDAYGEDRRNRTTNSNSFQIGRIDLDGMANRVGPRSWQN 432

Query: 1037 TEEEEYDWEDMSPTLVDRGRKNDFLSSSVPLYGSIGARYDFSKLNASSLESDIRSNHXXX 1216
            TEEEE+DWEDMSPTL DR R NDFL SSVP +G  GAR       +  L+SD RS+    
Sbjct: 433  TEEEEFDWEDMSPTLADRSRTNDFL-SSVPPFGGAGARPRLGTAASVQLDSDSRSSRLGQ 491

Query: 1217 XXXXXXXXXXITAEDSV-LSGRGTG---KLSGFQSEPNQNLDYQNFP------HHFSRSS 1366
                        AED+V + G G G   K++GFQ+E +Q +  +  P      HHF +++
Sbjct: 492  AQPSLMDDSSNIAEDAVPILGPGHGSAVKITGFQTERSQIIGSRYPPEAWKLSHHFPQTT 551

Query: 1367 HPLNGRGRGRDSQFRFPGSGVPSLGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGSSGPD 1546
              LN +G  R+ Q  F  SG+P+ G  +   P  DK  D D QL+RPP + SRM SS   
Sbjct: 552  DLLNAQGSSREFQMPFSRSGIPTSG-SESLGPLSDKLPDTDIQLLRPPTLPSRMVSSIAP 610

Query: 1547 SISSGAW 1567
            S S+G W
Sbjct: 611  S-STGVW 616


>XP_007026008.2 PREDICTED: polyadenylation and cleavage factor homolog 4 [Theobroma
            cacao]
          Length = 1001

 Score =  572 bits (1475), Expect = 0.0
 Identities = 326/563 (57%), Positives = 382/563 (67%), Gaps = 20/563 (3%)
 Frame = +2

Query: 2    AVLAELTINSKPIITDLTIIAGEQREHGDGIAEAICARIVEVPVDQKLPSLYLLDSIVKN 181
            AVL+ELT NSKPIITDLTIIAGEQREHG+GIA+AICARI+EVPV+QKLPSLYLLDSIVKN
Sbjct: 52   AVLSELTFNSKPIITDLTIIAGEQREHGEGIADAICARILEVPVEQKLPSLYLLDSIVKN 111

Query: 182  IGKEYVRHFSSCLPEVFCEAYRQVHPEMYSSMRHLFGTWSTVFPQSVLQKIEAELQFSSQ 361
            IG+EYVRHFSS LPEVFCEAYRQV+P +Y +MRHLFGTWSTVFP SVL+KIE +LQFS  
Sbjct: 112  IGREYVRHFSSRLPEVFCEAYRQVNPNLYPAMRHLFGTWSTVFPPSVLRKIEIQLQFSQS 171

Query: 362  VNKQPSNVNSPRASESPRPTHGIHVNPKYIRQLE-HSDPDSNIQQVRGTSSNLNVYGQKP 538
             N+Q   V S R+SESPRPTHGIHVNPKY+RQLE  S  DSN Q VRGTS+ L VYGQK 
Sbjct: 172  ANQQSPGVTSLRSSESPRPTHGIHVNPKYLRQLEQQSGADSNTQHVRGTSAALKVYGQKH 231

Query: 539  AIGYDDFDSNHSEVSSSQVGGQRLNPAGGVGRASFSLGANKPHPTSTSRLGRPLSPLGIG 718
            +IG+D+FDS+H+EV SS VG +RL   G VGR S  +GANK    S S + RP SP  IG
Sbjct: 232  SIGFDEFDSDHTEVPSSHVGVRRLRSTGNVGRTSVVVGANK----SASIVSRPFSPSRIG 287

Query: 719  ------SEVDEFAVENSPRG-LEGASPSRSVFDYGLGRAICRNEDMSEWRNP-------N 856
                  SEVD+   + SPR  +EG SPSR VFDYG GRAI R+E+  EW+         N
Sbjct: 288  SDRLVLSEVDDLPSDGSPRRFVEGTSPSRPVFDYGRGRAIVRDEETREWQRKHSYDDYHN 347

Query: 857  RFESNSIVYNISNGNEHPGPRALIDAYGSDR--RASNKKPLQVGCLGVNGMGNKVASRSW 1030
            R ES+   Y + NG+E   PRALIDAYG+DR    SN KP QV  L VNGMGNKV   SW
Sbjct: 348  RSESSLNAYKLGNGHERQTPRALIDAYGNDRGKGISNSKPAQVERLAVNGMGNKVTPISW 407

Query: 1031 QNTEEEEYDWEDMSPTLVDRGRKNDFLSSSVPLYGSIGARYDFSKLNASSLESDIRSNHX 1210
            QNTEEEE+DWEDMSPTL DR R NDF  SSVP +GSIG R        + LES+ RS+  
Sbjct: 408  QNTEEEEFDWEDMSPTLADRSRSNDFSLSSVPPFGSIGER-------PAGLESNSRSSRA 460

Query: 1211 XXXXXXXXXXXXI---TAEDSVLSGRGTGKLSGFQSEPNQNLDYQNFPHHFSRSSHPLNG 1381
                             A  S+ SGRG+ ++       +   +  N  +HFS+ S  L+ 
Sbjct: 461  TQTQLPLVDDSSTIPKNAVSSLSSGRGSSQI----LHSHHPQEAWNSSYHFSQPSRNLHA 516

Query: 1382 RGRGRDSQFRFPGSGVPSLGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGSSGPDSISSG 1561
            +GRGRD Q  F  SG+ SLG  +K  P IDK  D  +Q +RPPAVV R GSS  DS++ G
Sbjct: 517  KGRGRDFQIPFSASGIQSLG-GEKIVPLIDKLPDGGSQFLRPPAVVPRTGSSSLDSVTVG 575

Query: 1562 AWSASIPSGSGVPSLGVVDKAAP 1630
            A  A IPS +GV     V K+ P
Sbjct: 576  ARPAIIPSTTGVWPPVNVHKSQP 598


>OMO76739.1 hypothetical protein CCACVL1_15454 [Corchorus capsularis]
          Length = 1003

 Score =  566 bits (1458), Expect = 0.0
 Identities = 322/561 (57%), Positives = 380/561 (67%), Gaps = 18/561 (3%)
 Frame = +2

Query: 2    AVLAELTINSKPIITDLTIIAGEQREHGDGIAEAICARIVEVPVDQKLPSLYLLDSIVKN 181
            AVL+ELT NSKPIITDLTIIAGEQREHG+GIA+ ICARIVEVPV+QKLPSLYLLDSIVKN
Sbjct: 53   AVLSELTFNSKPIITDLTIIAGEQREHGEGIADVICARIVEVPVEQKLPSLYLLDSIVKN 112

Query: 182  IGKEYVRHFSSCLPEVFCEAYRQVHPEMYSSMRHLFGTWSTVFPQSVLQKIEAELQFSSQ 361
            IG+EYVRHFSS LPEVF EAYRQV+P +Y +MRHLFGTWS VFP SVL+KIE +LQFS  
Sbjct: 113  IGREYVRHFSSRLPEVFIEAYRQVNPNLYPAMRHLFGTWSAVFPPSVLRKIETQLQFSQS 172

Query: 362  VNKQPSNVNSPRASESPRPTHGIHVNPKYIRQLE-HSDPDSNIQQVRGTSSNLNVYGQKP 538
             N+Q S V S R+SESPRPTHGIHVNPKY+RQLE  S  D N Q VRGTS+ L +YG K 
Sbjct: 173  ANQQSSGVTSLRSSESPRPTHGIHVNPKYLRQLEQQSGADGNTQHVRGTSAGLKMYGAKH 232

Query: 539  AIGYDDFDSNHSEVSSSQVGGQRLNPAGGVGRASFSLGANKPHPTSTSRLGRPLSPLGIG 718
            +IGYDDFDS+++EV SS V  QRLN  G VGR S SLGANK   +  SR  RP SP  IG
Sbjct: 233  SIGYDDFDSDNTEVPSSHVAVQRLNSTGNVGRTSVSLGANKSQLSCASRASRPFSPSRIG 292

Query: 719  ------SEVDEFAVENSPRG-LEGASPSRSVFDYGLGRAICRNEDMSEWRNP------NR 859
                  SEV++   ++SPR  +EGASPSR  FDYG GRAI R+E+  EW         +R
Sbjct: 293  SDRLLSSEVEDLPPDDSPRRFIEGASPSRPAFDYGRGRAIIRDEETREWPRKQFFDDYHR 352

Query: 860  FESNSIVYNISNGNEHPGPRALIDAYGSDR-RASNKKPLQVGCLGVNGMGNKVASRSWQN 1036
             ES+   Y +SNG+E   PRALIDAYG+DR +  N KP+QV  L VNGMG+KV   SWQN
Sbjct: 353  SESSLNTYKLSNGHERQTPRALIDAYGNDRGKGFNSKPVQVERLDVNGMGHKVTPISWQN 412

Query: 1037 TEEEEYDWEDMSPTLVDRGRKNDFLSSSVPLYGSIGARYDFSKLNASSLESDIRSNHXXX 1216
            TEEEE+DWEDMSPTL DRGR ND+  SS P +GSIGAR        + LES+ RS+    
Sbjct: 413  TEEEEFDWEDMSPTLADRGRSNDYSLSSAPTFGSIGAR-------PAGLESNSRSSRTTQ 465

Query: 1217 XXXXXXXXXXITAED---SVLSGRGTGKLSGFQSEPNQNLDYQNFPHHFSRSSHPLNGRG 1387
                         ED   S+ SGRG   +   +S   Q  +  N    F +S+H L+ +G
Sbjct: 466  TQLPLVDDSSTIPEDAIPSMSSGRGLNPI--LRSHYPQ--EAWNSSQRFPQSTHHLHAKG 521

Query: 1388 RGRDSQFRFPGSGVPSLGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGSSGPDSISSGAW 1567
            RGRD    F  SG+ SLG  + + P IDK  D  +Q  RPPA++ R GSSG DS+  GA 
Sbjct: 522  RGRDFHLPFSASGISSLG-GENSVPLIDKLADGGSQF-RPPAILPRAGSSGLDSVPHGAR 579

Query: 1568 SASIPSGSGVPSLGVVDKAAP 1630
             A IPS +GV     V K+ P
Sbjct: 580  PAIIPSTTGVWPPVNVHKSQP 600


>XP_002316604.2 pre-mRNA cleavage complex-related family protein [Populus
            trichocarpa] EEE97216.2 pre-mRNA cleavage complex-related
            family protein [Populus trichocarpa]
          Length = 1031

 Score =  557 bits (1435), Expect = 0.0
 Identities = 315/566 (55%), Positives = 386/566 (68%), Gaps = 24/566 (4%)
 Frame = +2

Query: 5    VLAELTINSKPIITDLTIIAGEQREHGDGIAEAICARIVEVPVDQKLPSLYLLDSIVKNI 184
            VL ELT NSKPIITDLTIIAGE REHG+GIA+A+C RIVEVPVD KLPSLYLLDSIVKNI
Sbjct: 71   VLNELTFNSKPIITDLTIIAGELREHGEGIADALCGRIVEVPVDLKLPSLYLLDSIVKNI 130

Query: 185  GKEYVRHFSSCLPEVFCEAYRQVHPEMYSSMRHLFGTWSTVFPQSVLQKIEAELQFSSQV 364
            G+EY+ +FSS LPEVFCEAY QV P +Y SMRHLFGTWS+VFP SVL+KIE +LQ SSQ+
Sbjct: 131  GREYIGYFSSRLPEVFCEAYGQVDPRLYPSMRHLFGTWSSVFPSSVLRKIETQLQLSSQI 190

Query: 365  NKQPSNVNSPRASESPRPTHGIHVNPKYIRQLEHSDPDSNIQQVRGTSSNLNVYGQKPAI 544
            N Q S++ S +ASESPRP+HGIHVNPKY+RQ++ S  D+N+Q  +GT SNL +YG KPA+
Sbjct: 191  NNQSSSLTSLKASESPRPSHGIHVNPKYLRQMD-SSRDNNVQHTKGT-SNLKMYGHKPAV 248

Query: 545  GYDDFDSNHSEVSSSQVGGQRLNPAGGVGRASFSLGANKPHPTSTSRLGRPLSPLGIG-- 718
            GYD+++++ +EV SSQV         GV RAS +LG+NK  P+STSRL R LSP   G  
Sbjct: 249  GYDEYETDQAEVISSQV---------GVDRASLTLGSNKLQPSSTSRLARRLSPSTTGAE 299

Query: 719  ----SEVDEFAVENSPRG-LEGASPSRSVFDYGLGRAICRNEDMSEWR-----NPNRFES 868
                SE+D+FA  NSPR  +EG SPS   FDYG GR + R+++ +E R     + N +  
Sbjct: 300  RPSSSEIDDFAAGNSPRRFVEGLSPSHPPFDYGHGRVVVRDDETNELRRKHYSDDNHYRF 359

Query: 869  NSIVYNISNGNEHPGPRALIDAYGSDR--RASNKKPLQVGCLGVNGMGNKVASRSWQNTE 1042
             +   ++SNG+E  GPRALIDAYG DR  R  N KPL +  L V GM NKVA RSWQNTE
Sbjct: 360  EASARSLSNGHEQQGPRALIDAYGDDRGKRIPNSKPLHIEQLAVIGMHNKVAPRSWQNTE 419

Query: 1043 EEEYDWEDMSPTLVDRGRKNDFLSSSVPLYGSIGARYDFSKLNASSLESDIRSNHXXXXX 1222
            EEE+DWEDMSPTL+DRGR NDFL  SVP +GS+  R  F +LNA   +SDIRSN      
Sbjct: 420  EEEFDWEDMSPTLLDRGRSNDFLPPSVPPFGSVVPRPGFGRLNAIRADSDIRSNGSSLTP 479

Query: 1223 XXXXXXXXITAEDSVL---SGRG-TGKLSGFQSEPNQ------NLDYQNFPHHFSRSSHP 1372
                        D+V    SGRG T K+ G  +E NQ      + + +N P H  + S  
Sbjct: 480  MALVDDSSNMGGDAVSILGSGRGSTSKMPGLLTERNQISGSRYSQEARNLPPHIRQPSRL 539

Query: 1373 LNGRGRGRDSQFRFPGSGVPSLGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGSSGPDSI 1552
            LN +GRGRD Q    GSGV SLG  +   P ++K  D DA+LVRPPA+ SR+GSS  DS 
Sbjct: 540  LNAKGRGRDFQMPLSGSGVSSLG-GENFNPLVEKLPDMDAKLVRPPAIASRLGSS-IDSN 597

Query: 1553 SSGAWSASIPSGSGVPSLGVVDKAAP 1630
            SSG WS+++   SG      V K+ P
Sbjct: 598  SSGTWSSAVLPLSGAWPPVNVHKSLP 623


>GAV85191.1 CTD_bind domain-containing protein [Cephalotus follicularis]
          Length = 1006

 Score =  551 bits (1420), Expect = 0.0
 Identities = 319/550 (58%), Positives = 376/550 (68%), Gaps = 19/550 (3%)
 Frame = +2

Query: 5    VLAELTINSKPIITDLTIIAGEQREHGDGIAEAICARIVEVPVDQKLPSLYLLDSIVKNI 184
            +L+ELT N KPIITDLTIIAG+Q+EH DGIAEAIC RIVEVPV+ KLPSLYLLDSIVKNI
Sbjct: 69   LLSELTFNFKPIITDLTIIAGDQKEHADGIAEAICERIVEVPVELKLPSLYLLDSIVKNI 128

Query: 185  GKEYVRHFSSCLPEVFCEAYRQVHPEMYSSMRHLFGTWSTVFPQSVLQKIEAELQFSS-Q 361
            G+ YVRHFS+ LPEVFCEAYRQV P  Y +MRHLFGTWS VFP SVL +IE +LQFSS  
Sbjct: 129  GRHYVRHFSTRLPEVFCEAYRQVPPNQYPAMRHLFGTWSKVFPPSVLHQIETQLQFSSPS 188

Query: 362  VNKQPSNVNSPRASESPRPTHGIHVNPKYIRQLEHSDPDSNIQQVRGTSSNLNVYGQKPA 541
            VN Q S  NS R SESPRPTHGIHVNPKYIRQLEHS  DS+    RGTSS++  YGQKP 
Sbjct: 189  VNNQSSGFNSVRDSESPRPTHGIHVNPKYIRQLEHSTDDSSTHNARGTSSSVKFYGQKPT 248

Query: 542  IGYDDFDSNHSEVSSSQVGGQRLNPAGGVGRASFSLGANKPHPTSTSRLGRPLSPLG-IG 718
             GYD+++S++SE   +QVG QR+N  G V R  F  G NK + +STSR  R + P G I 
Sbjct: 249  SGYDEYNSDNSEAICAQVGAQRVN-TGSVSRTPFIPGTNKMN-SSTSRPSR-IGPDGPIS 305

Query: 719  SEVDEFAVENSPRGLEGASPSRSVFDYGLGRAICRNEDMSE-WRN----PNRFESNSIVY 883
             +VDEFA  NSPR L          DYGLGR   R+E+ SE WRN     NRF++ S+ Y
Sbjct: 306  LDVDEFAASNSPRRL---------VDYGLGRTYGRDEETSENWRNHFSDDNRFDT-SLTY 355

Query: 884  NISNGNEHPGPRALIDAYGSDR--RASNKKPLQVGCLGVNGMGNKVASRSWQNTEEEEYD 1057
            N SNG+ H GPRALIDAYG+DR    S+ KPL V  L +NGMGN+VA RSWQNTEEEE++
Sbjct: 356  NHSNGHGHQGPRALIDAYGNDRGKGISHNKPLHVDHLKINGMGNEVAPRSWQNTEEEEFN 415

Query: 1058 WEDMSPTLVDRGRKNDFLSSSVPLYGSIGARYDFSKLNASSLESDIRSNHXXXXXXXXXX 1237
            WEDMSPTL DR + NDFL SSVP+ G IGAR    K N+   ES IRS            
Sbjct: 416  WEDMSPTLADRSKSNDFLPSSVPISGRIGARPGIGKFNSIPSESGIRSKRTGQVQLPLVN 475

Query: 1238 XXXITAEDSVL---SGRG-TGKLSGFQSEPNQNL------DYQNFPHHFSRSSHPLNGRG 1387
               I AED+VL   SGRG TGK++GFQ+ P+Q L      + ++F H+ S++S   N R 
Sbjct: 476  DSSIIAEDAVLSMGSGRGQTGKITGFQNGPSQVLGPHYLPESRSFLHYTSQTSPLFNARK 535

Query: 1388 RGRDSQFRFPGSGVPSLGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGSSGPDSISSGAW 1567
            RGRD Q  F  S + + G  +K AP +DKF DAD Q VR P V SRM SS  DSI+ G  
Sbjct: 536  RGRDFQIPFSASVISTSG-GEKMAPPMDKFADADVQFVRLPTVASRMASSSIDSIAVGVR 594

Query: 1568 SASIPSGSGV 1597
             A +P  + V
Sbjct: 595  PAILPPSTTV 604


>XP_002518518.1 PREDICTED: polyadenylation and cleavage factor homolog 4 [Ricinus
            communis] EEF43905.1 conserved hypothetical protein
            [Ricinus communis]
          Length = 1023

 Score =  547 bits (1409), Expect = 0.0
 Identities = 313/549 (57%), Positives = 377/549 (68%), Gaps = 28/549 (5%)
 Frame = +2

Query: 5    VLAELTINSKPIITDLTIIAGEQREHGDGIAEAICARIVEVPVDQKLPSLYLLDSIVKNI 184
            VL ELT NSKPIITDLTIIAGE REHG GIA+AICARIVEVPVDQKLPSLYLLDSIVKNI
Sbjct: 76   VLDELTFNSKPIITDLTIIAGELREHGAGIADAICARIVEVPVDQKLPSLYLLDSIVKNI 135

Query: 185  GKEYVRHFSSCLPEVFCEAYRQVHPEMYSSMRHLFGTWSTVFPQSVLQKIEAELQFSSQV 364
            G++YVRHFSS LPEVFC AY+QVHP +++SMRHLF TWSTVFP SVL KIE++LQFSSQ 
Sbjct: 136  GRDYVRHFSSRLPEVFCAAYKQVHPNLHTSMRHLFRTWSTVFPPSVLSKIESQLQFSSQA 195

Query: 365  --NKQPSNVNSPRASESPRPTHGIHVNPKYIRQLEHSDPDSNIQQVRGTSSNLNVYGQKP 538
              N   S ++S +AS+SPR T+ IHVNPKY+R LE S  +++ Q VRG SS L V+G KP
Sbjct: 196  NNNNHSSGLSSLKASDSPRTTNVIHVNPKYVR-LEPSPSENSAQHVRGASSTLKVHGHKP 254

Query: 539  AIGYDDFDSNHSEVSSSQVGGQRLNPAGGVGRASFSLGANKPHPTSTSRLGRPLSPLGIG 718
             IG D+FDS+H EV+ S+VG QRLN  G  G +SF  G N+ HP S+SRL R LSP  IG
Sbjct: 255  YIGCDEFDSDHVEVTPSKVGAQRLNTMGNTGPSSFVHGPNRLHPPSSSRLTRRLSPSRIG 314

Query: 719  ------SEVDEFAVENSPRG-LEGASPSRSVFDYGLGRAICRNEDMSEWR-------NPN 856
                  SEVD+F   NSPR  LEGASPS  V D G  R++ R+E+ +EWR       N  
Sbjct: 315  AERPLPSEVDDFMAGNSPRRFLEGASPSHPVLDCGPLRSMGRDEETNEWRRKHYSDDNHK 374

Query: 857  RFESNSIVYNISNGNEHPGPRALIDAYGSD--RRASNKKPLQVGCLGVNGMGNKVASRSW 1030
            +FE+ SI YN+SNG+EH GPRALIDAYG D  +R  N K LQ+  L V+G  NKV  RSW
Sbjct: 375  KFEA-SIAYNLSNGHEHQGPRALIDAYGEDKRKRIPNSKHLQIERLDVDGTANKVGPRSW 433

Query: 1031 QNTEEEEYDWEDMSPTLVDRGRKNDFLSSSVPLYGSIGARYDFSKLNASSLESDIRSNHX 1210
            QNTEEEE+DWEDMSPTL+DR R N  L  SVP +G  GAR  F    AS L+SD+RS   
Sbjct: 434  QNTEEEEFDWEDMSPTLIDRSRSNGLL-LSVPPFGGAGARPGFGTRAASRLDSDLRSKQS 492

Query: 1211 XXXXXXXXXXXXITAEDSVL---SGRGT-GKLSGFQSEPNQNL------DYQNFPHHFSR 1360
                           +D++     GRG+ GKLSGFQ++ NQ +      +    PHHFS+
Sbjct: 493  GQAQLPLVDDSSNITDDTMSLLGPGRGSGGKLSGFQTDRNQTMGSRYPREAWKSPHHFSQ 552

Query: 1361 SSHPLNGRGRGRDSQFRFPGSGVPSLGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGSSG 1540
            S+  +N +GR RD Q  F GSG+ S G  +  A  +D+  DADAQ++RPP + SRM SS 
Sbjct: 553  SADLINAKGRNRDLQMPFSGSGISSSG-SEILASLVDQLPDADAQIIRPPTLPSRMSSST 611

Query: 1541 PDSISSGAW 1567
              S S+G W
Sbjct: 612  ALS-STGVW 619


>XP_017645983.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
            [Gossypium arboreum]
          Length = 1001

 Score =  543 bits (1400), Expect = e-180
 Identities = 313/561 (55%), Positives = 377/561 (67%), Gaps = 19/561 (3%)
 Frame = +2

Query: 5    VLAELTINSKPIITDLTIIAGEQREHGDGIAEAICARIVEVPVDQKLPSLYLLDSIVKNI 184
            VL+ELT NSKPIITDLTIIAGEQREHG+GIA+AICARI+EVPV+QKLPSLYLLDSIVKNI
Sbjct: 56   VLSELTFNSKPIITDLTIIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNI 115

Query: 185  GKEYVRHFSSCLPEVFCEAYRQVHPEMYSSMRHLFGTWSTVFPQSVLQKIEAELQFSSQV 364
            G+EYVR+FSS LPEVFCEAYRQV+P ++ +MRHLFGTWSTVFP SVL+KIE +LQFS   
Sbjct: 116  GREYVRYFSSRLPEVFCEAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTG 175

Query: 365  NKQPSNVNSPRASESPRPTHGIHVNPKYIRQLE-HSDPDSNIQQVRGTSSNLNVYGQKPA 541
            N+Q S V S ++SESPRPTHGIHVNPKY+RQLE  S  DSN Q VRG S+   +YGQK  
Sbjct: 176  NQQSSGVTSLQSSESPRPTHGIHVNPKYLRQLEQQSGADSNTQHVRGMSAGQKLYGQKHT 235

Query: 542  IGYDDFDSNHSEVSSSQVGGQRLNPAGGVGRASFSLGANKPHPTSTSRLGRPLSPLGIG- 718
            I YD+FDS+H+EV SS VG QRL+  G VGR S ++GANK   +S SR+ RP SP  IG 
Sbjct: 236  IAYDEFDSDHTEVPSSHVGVQRLSSTGNVGRTSLAIGANKSQLSSASRVSRPFSPSRIGS 295

Query: 719  -----SEVDEFAVENSPRGL-EGASPSR-SVFDYGLGRAICRNEDMSEWRNP-------N 856
                 SE+D+   ++SPR   E ASPSR  VFD+G GR   R+E+  EW          N
Sbjct: 296  DRLLSSEIDDLPSDDSPRRFAEVASPSRPPVFDFGRGRGTIRDEETREWPRKHFYGDYRN 355

Query: 857  RFESNSIVYNISNGNEHPGPRALIDAYGSDR--RASNKKPLQVGCLGVNGMGNKVASRSW 1030
              ES+   Y +SNGNE    RALIDAYG+DR    SN KP+QV  L +NGMGNKV  RSW
Sbjct: 356  CSESSLNAYKLSNGNERQTLRALIDAYGNDRGQGMSNSKPVQVERLDLNGMGNKVTPRSW 415

Query: 1031 QNTEEEEYDWEDMSPTLVDRGRKNDFLSSSVPLYGSIGARYDFSKLNASSLESDIRSNHX 1210
            QNTEEEE+DWEDMSPTL DR R N+F  SSV  +GSIGAR    + N SS     RSN  
Sbjct: 416  QNTEEEEFDWEDMSPTLADR-RSNEFSVSSVSTFGSIGARPAGLESNRSS-----RSNQT 469

Query: 1211 XXXXXXXXXXXXITAEDSVLSGRGTGKLSGFQSEPNQNLDYQNFPHHFSRSSHPLNGRGR 1390
                         T   S+ SG G  ++      P    D  +  + FS+SSH L+ +GR
Sbjct: 470  QLALDESSTIPEDTV-PSLSSGHGLNQI----QRPRYPQDAWSNSYPFSQSSHQLHAKGR 524

Query: 1391 GRDSQFRFPGSGVPSLGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGSSGPDSISSGAWS 1570
            GRD +  F  SG+ SLG  DK  P I+K  +  +Q VRPPA+V R GSS  D+++ GA  
Sbjct: 525  GRDFRTPFSASGISSLG-GDKNVPLIEKLPEGGSQFVRPPALVPRSGSSSLDTVTVGAQP 583

Query: 1571 ASIPSGSGV-PSLGVVDKAAP 1630
            A +P  +G  P + V+    P
Sbjct: 584  AMLPLTAGAWPPVNVLKSQPP 604


>XP_017645981.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
            [Gossypium arboreum] KHG24664.1 Pre-mRNA cleavage complex
            2 Pcf11 [Gossypium arboreum]
          Length = 1004

 Score =  543 bits (1400), Expect = e-180
 Identities = 313/561 (55%), Positives = 377/561 (67%), Gaps = 19/561 (3%)
 Frame = +2

Query: 5    VLAELTINSKPIITDLTIIAGEQREHGDGIAEAICARIVEVPVDQKLPSLYLLDSIVKNI 184
            VL+ELT NSKPIITDLTIIAGEQREHG+GIA+AICARI+EVPV+QKLPSLYLLDSIVKNI
Sbjct: 56   VLSELTFNSKPIITDLTIIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNI 115

Query: 185  GKEYVRHFSSCLPEVFCEAYRQVHPEMYSSMRHLFGTWSTVFPQSVLQKIEAELQFSSQV 364
            G+EYVR+FSS LPEVFCEAYRQV+P ++ +MRHLFGTWSTVFP SVL+KIE +LQFS   
Sbjct: 116  GREYVRYFSSRLPEVFCEAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTG 175

Query: 365  NKQPSNVNSPRASESPRPTHGIHVNPKYIRQLE-HSDPDSNIQQVRGTSSNLNVYGQKPA 541
            N+Q S V S ++SESPRPTHGIHVNPKY+RQLE  S  DSN Q VRG S+   +YGQK  
Sbjct: 176  NQQSSGVTSLQSSESPRPTHGIHVNPKYLRQLEQQSGADSNTQHVRGMSAGQKLYGQKHT 235

Query: 542  IGYDDFDSNHSEVSSSQVGGQRLNPAGGVGRASFSLGANKPHPTSTSRLGRPLSPLGIG- 718
            I YD+FDS+H+EV SS VG QRL+  G VGR S ++GANK   +S SR+ RP SP  IG 
Sbjct: 236  IAYDEFDSDHTEVPSSHVGVQRLSSTGNVGRTSLAIGANKSQLSSASRVSRPFSPSRIGS 295

Query: 719  -----SEVDEFAVENSPRGL-EGASPSR-SVFDYGLGRAICRNEDMSEWRNP-------N 856
                 SE+D+   ++SPR   E ASPSR  VFD+G GR   R+E+  EW          N
Sbjct: 296  DRLLSSEIDDLPSDDSPRRFAEVASPSRPPVFDFGRGRGTIRDEETREWPRKHFYGDYRN 355

Query: 857  RFESNSIVYNISNGNEHPGPRALIDAYGSDR--RASNKKPLQVGCLGVNGMGNKVASRSW 1030
              ES+   Y +SNGNE    RALIDAYG+DR    SN KP+QV  L +NGMGNKV  RSW
Sbjct: 356  CSESSLNAYKLSNGNERQTLRALIDAYGNDRGQGMSNSKPVQVERLDLNGMGNKVTPRSW 415

Query: 1031 QNTEEEEYDWEDMSPTLVDRGRKNDFLSSSVPLYGSIGARYDFSKLNASSLESDIRSNHX 1210
            QNTEEEE+DWEDMSPTL DR R N+F  SSV  +GSIGAR    + N SS     RSN  
Sbjct: 416  QNTEEEEFDWEDMSPTLADR-RSNEFSVSSVSTFGSIGARPAGLESNRSS-----RSNQT 469

Query: 1211 XXXXXXXXXXXXITAEDSVLSGRGTGKLSGFQSEPNQNLDYQNFPHHFSRSSHPLNGRGR 1390
                         T   S+ SG G  ++      P    D  +  + FS+SSH L+ +GR
Sbjct: 470  QLALDESSTIPEDTV-PSLSSGHGLNQI----QRPRYPQDAWSNSYPFSQSSHQLHAKGR 524

Query: 1391 GRDSQFRFPGSGVPSLGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGSSGPDSISSGAWS 1570
            GRD +  F  SG+ SLG  DK  P I+K  +  +Q VRPPA+V R GSS  D+++ GA  
Sbjct: 525  GRDFRTPFSASGISSLG-GDKNVPLIEKLPEGGSQFVRPPALVPRSGSSSLDTVTVGAQP 583

Query: 1571 ASIPSGSGV-PSLGVVDKAAP 1630
            A +P  +G  P + V+    P
Sbjct: 584  AMLPLTAGAWPPVNVLKSQPP 604