BLASTX nr result
ID: Phellodendron21_contig00009557
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00009557
(1253 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006476772.1 PREDICTED: putative exosome complex component rrp... 448 e-156
XP_006439811.1 hypothetical protein CICLE_v10021986mg [Citrus cl... 444 e-154
XP_012080072.1 PREDICTED: putative exosome complex component rrp... 410 e-141
XP_010251261.1 PREDICTED: putative exosome complex component rrp... 406 e-139
XP_002282635.1 PREDICTED: putative exosome complex component rrp... 402 e-137
XP_002318044.1 exonuclease-related family protein [Populus trich... 401 e-137
XP_011044305.1 PREDICTED: putative exosome complex component rrp... 400 e-136
XP_018821286.1 PREDICTED: putative exosome complex component rrp... 395 e-134
XP_019461415.1 PREDICTED: putative exosome complex component rrp... 392 e-133
XP_017426657.1 PREDICTED: putative exosome complex component rrp... 392 e-133
XP_017249653.1 PREDICTED: putative exosome complex component rrp... 392 e-133
XP_012478610.1 PREDICTED: putative exosome complex component rrp... 391 e-133
XP_014492890.1 PREDICTED: putative exosome complex component rrp... 390 e-133
XP_004138110.1 PREDICTED: putative exosome complex component rrp... 390 e-133
XP_016666803.1 PREDICTED: putative exosome complex component rrp... 390 e-133
XP_007209525.1 hypothetical protein PRUPE_ppa010609mg [Prunus pe... 390 e-133
XP_008464560.1 PREDICTED: putative exosome complex component rrp... 389 e-132
OMO81471.1 Exosome complex RNA-binding protein 1/RRP40/RRP4 [Cor... 389 e-132
XP_008364612.1 PREDICTED: LOW QUALITY PROTEIN: putative exosome ... 389 e-132
XP_012568723.1 PREDICTED: putative exosome complex component rrp... 389 e-132
>XP_006476772.1 PREDICTED: putative exosome complex component rrp40 [Citrus
sinensis] XP_006476773.1 PREDICTED: putative exosome
complex component rrp40 [Citrus sinensis] XP_015385315.1
PREDICTED: putative exosome complex component rrp40
[Citrus sinensis] XP_015385316.1 PREDICTED: putative
exosome complex component rrp40 [Citrus sinensis]
KDO69672.1 hypothetical protein CISIN_1g026458mg [Citrus
sinensis] KDO69673.1 hypothetical protein
CISIN_1g026458mg [Citrus sinensis]
Length = 238
Score = 448 bits (1152), Expect = e-156
Identities = 224/238 (94%), Positives = 233/238 (97%)
Frame = +1
Query: 214 MEAKPSTLSFVDKIVVPGDVVLDLSTMTNQTIKVGGGLRQDCDSISVMRAGKLRFSKPNK 393
MEAKPST + VDKIVVPGDVVLDLS+MTNQTIK+GGGLRQ+CDS+SV++AGKLRFSKPNK
Sbjct: 1 MEAKPSTANLVDKIVVPGDVVLDLSSMTNQTIKLGGGLRQECDSVSVIKAGKLRFSKPNK 60
Query: 394 YWVESSQKRYVPCAEDTVLGIVVDCKADNFFVDIKGPIIAFLPVLAFEGGTRRNIPKFEI 573
YWVESSQKRYVPC EDTVLGIVVDCKADNFFVDI+GP IAFLPVLAFEGGTRRNIPKFEI
Sbjct: 61 YWVESSQKRYVPCVEDTVLGIVVDCKADNFFVDIRGPTIAFLPVLAFEGGTRRNIPKFEI 120
Query: 574 GSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPACPVLE 753
GSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSP CPVLE
Sbjct: 121 GSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPTCPVLE 180
Query: 754 ELGKQLSFEIAVGLNGRVWVNAESPSTVVVVSNAIMNSESLSAVQQKIMVDKLLQRIK 927
ELGKQLSFEIAVGLNGRVWVNAESPSTVV+VSNAIMNSESLSAVQQKIMVDKLLQRIK
Sbjct: 181 ELGKQLSFEIAVGLNGRVWVNAESPSTVVLVSNAIMNSESLSAVQQKIMVDKLLQRIK 238
>XP_006439811.1 hypothetical protein CICLE_v10021986mg [Citrus clementina]
XP_006439812.1 hypothetical protein CICLE_v10021986mg
[Citrus clementina] ESR53051.1 hypothetical protein
CICLE_v10021986mg [Citrus clementina] ESR53052.1
hypothetical protein CICLE_v10021986mg [Citrus
clementina]
Length = 238
Score = 444 bits (1143), Expect = e-154
Identities = 222/238 (93%), Positives = 232/238 (97%)
Frame = +1
Query: 214 MEAKPSTLSFVDKIVVPGDVVLDLSTMTNQTIKVGGGLRQDCDSISVMRAGKLRFSKPNK 393
MEAKPST + VDKIVVPGDVVLDLS+MTNQTIK+GGGLRQ+CDS+SV++AGKLRFSKPNK
Sbjct: 1 MEAKPSTTNLVDKIVVPGDVVLDLSSMTNQTIKLGGGLRQECDSVSVIKAGKLRFSKPNK 60
Query: 394 YWVESSQKRYVPCAEDTVLGIVVDCKADNFFVDIKGPIIAFLPVLAFEGGTRRNIPKFEI 573
YWVESS KRYVPC EDTVLGIVVDCKADNFFVDI+GP IAFLPVLAFEGGTRRNIPKFEI
Sbjct: 61 YWVESSHKRYVPCVEDTVLGIVVDCKADNFFVDIRGPTIAFLPVLAFEGGTRRNIPKFEI 120
Query: 574 GSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPACPVLE 753
GSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETS+GLSRMLLSSP CPVLE
Sbjct: 121 GSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSSGLSRMLLSSPTCPVLE 180
Query: 754 ELGKQLSFEIAVGLNGRVWVNAESPSTVVVVSNAIMNSESLSAVQQKIMVDKLLQRIK 927
ELGKQLSFEIAVGLNGRVWVNAESPSTVV+VSNAIMNSESLSAVQQKIMVDKLLQRIK
Sbjct: 181 ELGKQLSFEIAVGLNGRVWVNAESPSTVVLVSNAIMNSESLSAVQQKIMVDKLLQRIK 238
>XP_012080072.1 PREDICTED: putative exosome complex component rrp40 [Jatropha
curcas] KDP31104.1 hypothetical protein JCGZ_11480
[Jatropha curcas]
Length = 241
Score = 410 bits (1054), Expect = e-141
Identities = 203/240 (84%), Positives = 225/240 (93%), Gaps = 2/240 (0%)
Frame = +1
Query: 214 MEAKPST--LSFVDKIVVPGDVVLDLSTMTNQTIKVGGGLRQDCDSISVMRAGKLRFSKP 387
MEAKPS+ S VDK+VVPGDVV+DLSTM+NQTIK+GGGLRQDCD+ISV ++GKLRFSKP
Sbjct: 1 MEAKPSSSPTSLVDKLVVPGDVVIDLSTMSNQTIKLGGGLRQDCDAISVTKSGKLRFSKP 60
Query: 388 NKYWVESSQKRYVPCAEDTVLGIVVDCKADNFFVDIKGPIIAFLPVLAFEGGTRRNIPKF 567
NKYWVE SQKRYVPCAED+VLGIVVD KA+NF VDIKGP +AFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVEGSQKRYVPCAEDSVLGIVVDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 120
Query: 568 EIGSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPACPV 747
E+G+LLYVRVVKANPGMNPELSCTDASGKAAEFG+LKDGYMFE STGLSRMLLSSP CPV
Sbjct: 121 EVGTLLYVRVVKANPGMNPELSCTDASGKAAEFGVLKDGYMFECSTGLSRMLLSSPTCPV 180
Query: 748 LEELGKQLSFEIAVGLNGRVWVNAESPSTVVVVSNAIMNSESLSAVQQKIMVDKLLQRIK 927
LE LG +LSFEIAVGLNGRVWVNA SPSTV++V+NAIMNSE+LS VQQKIMV+KLLQ+I+
Sbjct: 181 LEALGNKLSFEIAVGLNGRVWVNATSPSTVIIVANAIMNSETLSGVQQKIMVEKLLQKIQ 240
>XP_010251261.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Nelumbo nucifera]
Length = 243
Score = 406 bits (1044), Expect = e-139
Identities = 199/235 (84%), Positives = 221/235 (94%)
Frame = +1
Query: 232 TLSFVDKIVVPGDVVLDLSTMTNQTIKVGGGLRQDCDSISVMRAGKLRFSKPNKYWVESS 411
T SF+D+IVVPGDVVLDLS+M+NQTIK+GGGLRQDCD+ISVM+AGKL+FSKPNKYWVESS
Sbjct: 9 TTSFIDQIVVPGDVVLDLSSMSNQTIKLGGGLRQDCDTISVMKAGKLKFSKPNKYWVESS 68
Query: 412 QKRYVPCAEDTVLGIVVDCKADNFFVDIKGPIIAFLPVLAFEGGTRRNIPKFEIGSLLYV 591
QKRYVPC EDT+LG VVD KADNF VDIKGP +AFLPVLAFEGGTRRNIPK+E G+LLYV
Sbjct: 69 QKRYVPCVEDTILGTVVDSKADNFLVDIKGPTLAFLPVLAFEGGTRRNIPKYEAGTLLYV 128
Query: 592 RVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPACPVLEELGKQL 771
RVVKAN GMNPELSCTDASGKAAEFG+LKDGYMFETSTGLSRMLLSSP CPVLE LGK+L
Sbjct: 129 RVVKANAGMNPELSCTDASGKAAEFGVLKDGYMFETSTGLSRMLLSSPTCPVLEALGKKL 188
Query: 772 SFEIAVGLNGRVWVNAESPSTVVVVSNAIMNSESLSAVQQKIMVDKLLQRIK*SS 936
SFEIA+GLNGRVWVNA SPSTV++VSNAIMNSESLS VQQ+IMV+KL+Q+ + SS
Sbjct: 189 SFEIAIGLNGRVWVNAASPSTVILVSNAIMNSESLSGVQQRIMVEKLMQKFQSSS 243
>XP_002282635.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Vitis vinifera] CBI15022.3 unnamed protein product,
partial [Vitis vinifera]
Length = 237
Score = 402 bits (1032), Expect = e-137
Identities = 200/230 (86%), Positives = 215/230 (93%)
Frame = +1
Query: 238 SFVDKIVVPGDVVLDLSTMTNQTIKVGGGLRQDCDSISVMRAGKLRFSKPNKYWVESSQK 417
SFVD++VVPGDVVLDLS M NQTIK+GGGL QDCD+I+V +AG+LRFSKPNKYWVESSQK
Sbjct: 8 SFVDQLVVPGDVVLDLSKMGNQTIKLGGGLHQDCDAITVTKAGRLRFSKPNKYWVESSQK 67
Query: 418 RYVPCAEDTVLGIVVDCKADNFFVDIKGPIIAFLPVLAFEGGTRRNIPKFEIGSLLYVRV 597
RYVPC EDTVLGIVVD KADNF VDIKGP +AFLPVLAFEGGTRRNIPKFE G+LLYVRV
Sbjct: 68 RYVPCVEDTVLGIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRV 127
Query: 598 VKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPACPVLEELGKQLSF 777
VKAN GMNPELSCTDASGKAAEFG LKDGYMFE+STGLSRMLLSSP CPVLE LGK+LSF
Sbjct: 128 VKANTGMNPELSCTDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPTCPVLEALGKKLSF 187
Query: 778 EIAVGLNGRVWVNAESPSTVVVVSNAIMNSESLSAVQQKIMVDKLLQRIK 927
EIAVGLNGRVWVNA SPSTV++V+NAIMNSESLS VQQKIMVDKLLQRI+
Sbjct: 188 EIAVGLNGRVWVNASSPSTVILVANAIMNSESLSVVQQKIMVDKLLQRIQ 237
>XP_002318044.1 exonuclease-related family protein [Populus trichocarpa] ABK93275.1
unknown [Populus trichocarpa] EEE96264.1
exonuclease-related family protein [Populus trichocarpa]
Length = 242
Score = 401 bits (1031), Expect = e-137
Identities = 198/240 (82%), Positives = 221/240 (92%), Gaps = 2/240 (0%)
Frame = +1
Query: 214 MEAKPS--TLSFVDKIVVPGDVVLDLSTMTNQTIKVGGGLRQDCDSISVMRAGKLRFSKP 387
ME+K S +F+D +VVPGDVV+DLS+MTNQTIK+G GLRQDCD+ISVM+AGKLRFSKP
Sbjct: 1 MESKSSGSPATFIDNLVVPGDVVVDLSSMTNQTIKLGSGLRQDCDAISVMKAGKLRFSKP 60
Query: 388 NKYWVESSQKRYVPCAEDTVLGIVVDCKADNFFVDIKGPIIAFLPVLAFEGGTRRNIPKF 567
NKYWVE+SQKRYVPCAED+VLGIVVD K+DNF +DIKGP +AFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVETSQKRYVPCAEDSVLGIVVDSKSDNFLIDIKGPALAFLPVLAFEGGTRRNIPKF 120
Query: 568 EIGSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPACPV 747
E G+LLYVRVVKANPGMNPELSCTDASGKAAEFG LKDGYMFE STGLSRMLLSSP CPV
Sbjct: 121 EAGTLLYVRVVKANPGMNPELSCTDASGKAAEFGALKDGYMFECSTGLSRMLLSSPTCPV 180
Query: 748 LEELGKQLSFEIAVGLNGRVWVNAESPSTVVVVSNAIMNSESLSAVQQKIMVDKLLQRIK 927
LE LGK+LSFEIAVGLNGRVWVNA SPS V++V+NAIMNSE+LS VQQKIM +KLLQ+I+
Sbjct: 181 LEALGKKLSFEIAVGLNGRVWVNANSPSIVIIVANAIMNSETLSGVQQKIMAEKLLQKIQ 240
>XP_011044305.1 PREDICTED: putative exosome complex component rrp40 [Populus
euphratica]
Length = 242
Score = 400 bits (1027), Expect = e-136
Identities = 195/240 (81%), Positives = 222/240 (92%), Gaps = 2/240 (0%)
Frame = +1
Query: 214 MEAKPS--TLSFVDKIVVPGDVVLDLSTMTNQTIKVGGGLRQDCDSISVMRAGKLRFSKP 387
ME+K S +F+D +VVPGDVV+DLS+MTNQTIK+GGGLRQDCD+ISVM+AGKLRFSKP
Sbjct: 1 MESKSSGSPATFIDNLVVPGDVVVDLSSMTNQTIKLGGGLRQDCDAISVMKAGKLRFSKP 60
Query: 388 NKYWVESSQKRYVPCAEDTVLGIVVDCKADNFFVDIKGPIIAFLPVLAFEGGTRRNIPKF 567
NKYWVE+SQKRYVPCAED++LGIVVD K+DNF +D+KGP +AFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVETSQKRYVPCAEDSILGIVVDSKSDNFLIDMKGPALAFLPVLAFEGGTRRNIPKF 120
Query: 568 EIGSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPACPV 747
E G+LLYVRVVKANPGM+PELSCTDASGKAAEFG LKDGYMFE STGLSRMLLSSP CPV
Sbjct: 121 EAGTLLYVRVVKANPGMSPELSCTDASGKAAEFGALKDGYMFECSTGLSRMLLSSPTCPV 180
Query: 748 LEELGKQLSFEIAVGLNGRVWVNAESPSTVVVVSNAIMNSESLSAVQQKIMVDKLLQRIK 927
LE LGK+LSFEIAVGLNGRVWVNA SPS V++V+NAIMNSE+LS +QQKIM +KLLQ+I+
Sbjct: 181 LEALGKKLSFEIAVGLNGRVWVNANSPSIVIIVANAIMNSETLSGIQQKIMAEKLLQKIQ 240
>XP_018821286.1 PREDICTED: putative exosome complex component rrp40 [Juglans regia]
Length = 243
Score = 395 bits (1014), Expect = e-134
Identities = 200/243 (82%), Positives = 222/243 (91%), Gaps = 2/243 (0%)
Frame = +1
Query: 214 MEAKPS--TLSFVDKIVVPGDVVLDLSTMTNQTIKVGGGLRQDCDSISVMRAGKLRFSKP 387
ME PS SFVD++VVPGDVVLDL++MTNQTIK+GGGLRQDCD+I+V +AGKLR SKP
Sbjct: 1 MENNPSGSPASFVDQLVVPGDVVLDLNSMTNQTIKLGGGLRQDCDAIAVTKAGKLRCSKP 60
Query: 388 NKYWVESSQKRYVPCAEDTVLGIVVDCKADNFFVDIKGPIIAFLPVLAFEGGTRRNIPKF 567
NKYWVESSQKRY P A D+VLGIVVD KADNF VDIKGP +A+LPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVESSQKRYEPHAGDSVLGIVVDSKADNFLVDIKGPALAYLPVLAFEGGTRRNIPKF 120
Query: 568 EIGSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPACPV 747
E+G+LLYVRVVKANPGMNPELSCTDASGKAAEFG LKDGYMFE+STGLSR LLSSP CPV
Sbjct: 121 EVGTLLYVRVVKANPGMNPELSCTDASGKAAEFGQLKDGYMFESSTGLSRTLLSSPTCPV 180
Query: 748 LEELGKQLSFEIAVGLNGRVWVNAESPSTVVVVSNAIMNSESLSAVQQKIMVDKLLQRIK 927
L+ LGK+LSFEIAVGLNGRVWVNA SPSTV+VV+NAIMNSESLSAVQQ+IMV+KLLQ +K
Sbjct: 181 LDVLGKKLSFEIAVGLNGRVWVNATSPSTVIVVANAIMNSESLSAVQQRIMVEKLLQNLK 240
Query: 928 *SS 936
S+
Sbjct: 241 LST 243
>XP_019461415.1 PREDICTED: putative exosome complex component rrp40 [Lupinus
angustifolius] XP_019461416.1 PREDICTED: putative
exosome complex component rrp40 [Lupinus angustifolius]
XP_019461417.1 PREDICTED: putative exosome complex
component rrp40 [Lupinus angustifolius] XP_019461418.1
PREDICTED: putative exosome complex component rrp40
[Lupinus angustifolius] XP_019461419.1 PREDICTED:
putative exosome complex component rrp40 [Lupinus
angustifolius] OIW02161.1 hypothetical protein
TanjilG_02385 [Lupinus angustifolius]
Length = 237
Score = 392 bits (1006), Expect = e-133
Identities = 195/238 (81%), Positives = 217/238 (91%)
Frame = +1
Query: 214 MEAKPSTLSFVDKIVVPGDVVLDLSTMTNQTIKVGGGLRQDCDSISVMRAGKLRFSKPNK 393
ME KPST +FVDK+V PGDVVLDLSTMTNQTIK+GGGLRQDCD+ISV +AG+LRFSKPNK
Sbjct: 1 METKPST-NFVDKLVCPGDVVLDLSTMTNQTIKLGGGLRQDCDTISVTKAGRLRFSKPNK 59
Query: 394 YWVESSQKRYVPCAEDTVLGIVVDCKADNFFVDIKGPIIAFLPVLAFEGGTRRNIPKFEI 573
YWVESSQKRYVP AED+V+GIVVD ++DNF VDIKGP +A LPVLAFEGGTRRNIPKFE
Sbjct: 60 YWVESSQKRYVPHAEDSVIGIVVDHRSDNFIVDIKGPTLALLPVLAFEGGTRRNIPKFEA 119
Query: 574 GSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPACPVLE 753
G+ +YVRVV ANP MNPEL+CTDASGKAAEFG LK+GYMFE STGLSRMLLSSP CPVLE
Sbjct: 120 GTSIYVRVVTANPEMNPELACTDASGKAAEFGALKEGYMFECSTGLSRMLLSSPTCPVLE 179
Query: 754 ELGKQLSFEIAVGLNGRVWVNAESPSTVVVVSNAIMNSESLSAVQQKIMVDKLLQRIK 927
LGK+LSFEIAVGLNGRVWVN+ SPST ++V+NAIMNSESLS VQQKIM DKLLQ+I+
Sbjct: 180 ALGKKLSFEIAVGLNGRVWVNSASPSTTIIVANAIMNSESLSGVQQKIMADKLLQKIQ 237
>XP_017426657.1 PREDICTED: putative exosome complex component rrp40 [Vigna
angularis] KOM45906.1 hypothetical protein
LR48_Vigan06g121200 [Vigna angularis] BAT99075.1
hypothetical protein VIGAN_10045400 [Vigna angularis
var. angularis]
Length = 240
Score = 392 bits (1006), Expect = e-133
Identities = 195/240 (81%), Positives = 219/240 (91%), Gaps = 2/240 (0%)
Frame = +1
Query: 214 MEAKPSTLS--FVDKIVVPGDVVLDLSTMTNQTIKVGGGLRQDCDSISVMRAGKLRFSKP 387
ME KPS+ S FVD++V PGDVVLDLS+MTNQTIK+GGGLRQ+CD+ISVM+AGKLRFSKP
Sbjct: 1 METKPSSSSANFVDQLVCPGDVVLDLSSMTNQTIKLGGGLRQECDAISVMKAGKLRFSKP 60
Query: 388 NKYWVESSQKRYVPCAEDTVLGIVVDCKADNFFVDIKGPIIAFLPVLAFEGGTRRNIPKF 567
NKYWVE+SQKRYVP AED+VLGIV D ++DNF VDIKGP IAFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVENSQKRYVPHAEDSVLGIVADSRSDNFLVDIKGPAIAFLPVLAFEGGTRRNIPKF 120
Query: 568 EIGSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPACPV 747
EIG+LLYVRVVKANPGMNPELSCTDA+GKAAEFG LKDGYMFE +TGLSR LLSSP CPV
Sbjct: 121 EIGTLLYVRVVKANPGMNPELSCTDATGKAAEFGALKDGYMFECTTGLSRRLLSSPTCPV 180
Query: 748 LEELGKQLSFEIAVGLNGRVWVNAESPSTVVVVSNAIMNSESLSAVQQKIMVDKLLQRIK 927
L+ LGK++SFEIAVGLNGRVWV A SP T V+V+NAIMNSE+LS QQ+IMV+KLLQRI+
Sbjct: 181 LDALGKKISFEIAVGLNGRVWVKAASPQTTVIVANAIMNSETLSDAQQRIMVEKLLQRIQ 240
>XP_017249653.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Daucus carota subsp. sativus] KZM93240.1 hypothetical
protein DCAR_016485 [Daucus carota subsp. sativus]
Length = 241
Score = 392 bits (1006), Expect = e-133
Identities = 192/239 (80%), Positives = 220/239 (92%)
Frame = +1
Query: 205 LLLMEAKPSTLSFVDKIVVPGDVVLDLSTMTNQTIKVGGGLRQDCDSISVMRAGKLRFSK 384
+ + E ++ S++DK+VVPGDVVLDLS+M+NQTIK+GGGLRQDCDSI+ M+AG LRFSK
Sbjct: 1 MAIAEPTNNSPSYIDKLVVPGDVVLDLSSMSNQTIKLGGGLRQDCDSITAMKAGMLRFSK 60
Query: 385 PNKYWVESSQKRYVPCAEDTVLGIVVDCKADNFFVDIKGPIIAFLPVLAFEGGTRRNIPK 564
PNKYWVESSQKRYVP A D VLGIVVD KA+NF +DIKGP +A+LPVLAFEGGTRRNIPK
Sbjct: 61 PNKYWVESSQKRYVPSAGDAVLGIVVDTKAENFLIDIKGPALAYLPVLAFEGGTRRNIPK 120
Query: 565 FEIGSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPACP 744
FE+G+L+YVRVVKAN GMNP+LSC DASGKAAEFG LKDGYMFETSTGLSRMLLSSPACP
Sbjct: 121 FEVGTLIYVRVVKANIGMNPDLSCMDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPACP 180
Query: 745 VLEELGKQLSFEIAVGLNGRVWVNAESPSTVVVVSNAIMNSESLSAVQQKIMVDKLLQR 921
VLE LGK+LSFEIAVGLNGRVWVNA +PSTV++VSNAIMNSE+L++VQQK+MVDKLLQR
Sbjct: 181 VLEALGKKLSFEIAVGLNGRVWVNAAAPSTVILVSNAIMNSETLTSVQQKLMVDKLLQR 239
>XP_012478610.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Gossypium raimondii] KJB30309.1 hypothetical protein
B456_005G137000 [Gossypium raimondii]
Length = 240
Score = 391 bits (1005), Expect = e-133
Identities = 197/240 (82%), Positives = 214/240 (89%), Gaps = 2/240 (0%)
Frame = +1
Query: 214 MEAKPST--LSFVDKIVVPGDVVLDLSTMTNQTIKVGGGLRQDCDSISVMRAGKLRFSKP 387
ME K S+ SFVD VVPGDVVLDLS+MTNQTIK+GGGLRQDCD+IS M+AG LRFSKP
Sbjct: 1 MENKQSSSPASFVDSTVVPGDVVLDLSSMTNQTIKLGGGLRQDCDAISAMKAGTLRFSKP 60
Query: 388 NKYWVESSQKRYVPCAEDTVLGIVVDCKADNFFVDIKGPIIAFLPVLAFEGGTRRNIPKF 567
NKYW+ESSQKRYVPC EDT+LGIVVD KADNF +DIKGP + FLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWIESSQKRYVPCVEDTILGIVVDSKADNFLIDIKGPAMGFLPVLAFEGGTRRNIPKF 120
Query: 568 EIGSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPACPV 747
E+G+LLY+RVVKAN GMNPELSCTDASGKAAEFG LKDGYMFETSTGLSR LLSSPACPV
Sbjct: 121 EVGTLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPACPV 180
Query: 748 LEELGKQLSFEIAVGLNGRVWVNAESPSTVVVVSNAIMNSESLSAVQQKIMVDKLLQRIK 927
LE LGK+LSFEIAVGLNGRVWVNA SP T+VVV+NAIMNSE LS QQ IMVD LL+ I+
Sbjct: 181 LEALGKKLSFEIAVGLNGRVWVNAASPDTIVVVANAIMNSECLSGAQQIIMVDHLLKNIQ 240
>XP_014492890.1 PREDICTED: putative exosome complex component rrp40 [Vigna radiata
var. radiata] XP_014492891.1 PREDICTED: putative exosome
complex component rrp40 [Vigna radiata var. radiata]
Length = 240
Score = 390 bits (1002), Expect = e-133
Identities = 193/240 (80%), Positives = 218/240 (90%), Gaps = 2/240 (0%)
Frame = +1
Query: 214 MEAKPSTLS--FVDKIVVPGDVVLDLSTMTNQTIKVGGGLRQDCDSISVMRAGKLRFSKP 387
ME KPS+ S FVD++V PGDVVLDLS+MTNQTIK+GGGLRQDCD+ISVM+AG+LRFSKP
Sbjct: 1 METKPSSSSANFVDQLVCPGDVVLDLSSMTNQTIKLGGGLRQDCDAISVMKAGRLRFSKP 60
Query: 388 NKYWVESSQKRYVPCAEDTVLGIVVDCKADNFFVDIKGPIIAFLPVLAFEGGTRRNIPKF 567
NKYWVE+SQKRYVP AED+VLGIV D ++DNF VDIKGP IAFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVENSQKRYVPHAEDSVLGIVADSRSDNFLVDIKGPAIAFLPVLAFEGGTRRNIPKF 120
Query: 568 EIGSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPACPV 747
EIG+LLY RVVKANPGMNPELSCTDA+GKAAEFG LKDGYMFE +TGLSR LLSSP CPV
Sbjct: 121 EIGTLLYARVVKANPGMNPELSCTDATGKAAEFGALKDGYMFECTTGLSRRLLSSPTCPV 180
Query: 748 LEELGKQLSFEIAVGLNGRVWVNAESPSTVVVVSNAIMNSESLSAVQQKIMVDKLLQRIK 927
L+ LGK++SFEIAVGLNGRVWV A SP T ++V+NAIMNSE+LS QQ+IMV+KLLQRI+
Sbjct: 181 LDALGKKISFEIAVGLNGRVWVKAASPQTTIIVANAIMNSETLSDAQQRIMVEKLLQRIQ 240
>XP_004138110.1 PREDICTED: putative exosome complex component rrp40 [Cucumis
sativus] KGN63583.1 hypothetical protein Csa_1G004950
[Cucumis sativus]
Length = 243
Score = 390 bits (1002), Expect = e-133
Identities = 197/243 (81%), Positives = 218/243 (89%), Gaps = 2/243 (0%)
Frame = +1
Query: 214 MEAKPSTLS--FVDKIVVPGDVVLDLSTMTNQTIKVGGGLRQDCDSISVMRAGKLRFSKP 387
M KPS+ S VD+ VVPGDVVLDLS M N+TIK+GGGLRQD D+ISV + GKLRFSKP
Sbjct: 1 MVEKPSSSSSTLVDQPVVPGDVVLDLSNMANETIKLGGGLRQDQDAISVSKVGKLRFSKP 60
Query: 388 NKYWVESSQKRYVPCAEDTVLGIVVDCKADNFFVDIKGPIIAFLPVLAFEGGTRRNIPKF 567
NKYWVESSQKRYVPCAED VLGIV+D +ADNF VDIKGP +AFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVESSQKRYVPCAEDCVLGIVLDSRADNFLVDIKGPSLAFLPVLAFEGGTRRNIPKF 120
Query: 568 EIGSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPACPV 747
E+G+LLYVRVVK NPGMNPEL+CTDASGKAA FGLLKDGYMFE STGLSRMLLSSP+CPV
Sbjct: 121 EMGALLYVRVVKVNPGMNPELACTDASGKAAGFGLLKDGYMFECSTGLSRMLLSSPSCPV 180
Query: 748 LEELGKQLSFEIAVGLNGRVWVNAESPSTVVVVSNAIMNSESLSAVQQKIMVDKLLQRIK 927
LE LGK+LSFE AVGLNGRVWVNA+SPST++VVSNAI+NSE+LS VQQ+IMVDKLL +K
Sbjct: 181 LESLGKKLSFETAVGLNGRVWVNADSPSTIIVVSNAILNSETLSGVQQRIMVDKLLANLK 240
Query: 928 *SS 936
SS
Sbjct: 241 LSS 243
>XP_016666803.1 PREDICTED: putative exosome complex component rrp40 isoform X2
[Gossypium hirsutum] XP_017635430.1 PREDICTED: putative
exosome complex component rrp40 isoform X2 [Gossypium
arboreum]
Length = 240
Score = 390 bits (1001), Expect = e-133
Identities = 196/240 (81%), Positives = 214/240 (89%), Gaps = 2/240 (0%)
Frame = +1
Query: 214 MEAKPST--LSFVDKIVVPGDVVLDLSTMTNQTIKVGGGLRQDCDSISVMRAGKLRFSKP 387
ME K S+ SFVD VVPGDVVLDLS+MT+QTIK+GGGLRQDCD+IS M+AG LRFSKP
Sbjct: 1 MENKQSSSPASFVDSTVVPGDVVLDLSSMTSQTIKLGGGLRQDCDAISAMKAGTLRFSKP 60
Query: 388 NKYWVESSQKRYVPCAEDTVLGIVVDCKADNFFVDIKGPIIAFLPVLAFEGGTRRNIPKF 567
NKYW+ESSQKRYVPC EDT+LGIVVD KADNF +DIKGP + FLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWIESSQKRYVPCVEDTILGIVVDSKADNFLIDIKGPAMGFLPVLAFEGGTRRNIPKF 120
Query: 568 EIGSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPACPV 747
E+G+LLY+RVVKAN GMNPELSCTDASGKAAEFG LKDGYMFETSTGLSR LLSSP CPV
Sbjct: 121 EVGTLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPTCPV 180
Query: 748 LEELGKQLSFEIAVGLNGRVWVNAESPSTVVVVSNAIMNSESLSAVQQKIMVDKLLQRIK 927
LE LGK+LSFEIAVGLNGRVWVNA SP T+VVV+NAIMNSESLS QQ IMVD LL+ I+
Sbjct: 181 LEALGKKLSFEIAVGLNGRVWVNAASPDTIVVVANAIMNSESLSGAQQIIMVDHLLKNIQ 240
>XP_007209525.1 hypothetical protein PRUPE_ppa010609mg [Prunus persica]
Length = 243
Score = 390 bits (1001), Expect = e-133
Identities = 193/240 (80%), Positives = 215/240 (89%)
Frame = +1
Query: 217 EAKPSTLSFVDKIVVPGDVVLDLSTMTNQTIKVGGGLRQDCDSISVMRAGKLRFSKPNKY 396
+A S SFVD+ VVPGDVVLDL++M NQTIK+GGGLRQDCD+I+ M+AG L+FSKPNKY
Sbjct: 4 KATGSPASFVDQSVVPGDVVLDLTSMANQTIKLGGGLRQDCDAIAAMKAGTLKFSKPNKY 63
Query: 397 WVESSQKRYVPCAEDTVLGIVVDCKADNFFVDIKGPIIAFLPVLAFEGGTRRNIPKFEIG 576
WVE+SQKRYVPCA D+VLGIV D KADNF VDIKGP IAFLPVLAFEGGTRRNIPKFE+G
Sbjct: 64 WVETSQKRYVPCAGDSVLGIVADSKADNFLVDIKGPTIAFLPVLAFEGGTRRNIPKFEVG 123
Query: 577 SLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPACPVLEE 756
+LLYVRVVKANPGMNPELSC DASGKAAE+G LKDGYMFE STGLS+MLLSSP CPVLE
Sbjct: 124 TLLYVRVVKANPGMNPELSCIDASGKAAEYGPLKDGYMFECSTGLSKMLLSSPRCPVLEA 183
Query: 757 LGKQLSFEIAVGLNGRVWVNAESPSTVVVVSNAIMNSESLSAVQQKIMVDKLLQRIK*SS 936
LGK +SFE A+GLNGRVWVNA SPSTV VV+NAIMN+ESLS VQQ+IMVDKL+Q +K SS
Sbjct: 184 LGKNISFETAIGLNGRVWVNAGSPSTVTVVANAIMNAESLSGVQQRIMVDKLIQNLKLSS 243
>XP_008464560.1 PREDICTED: putative exosome complex component rrp40 [Cucumis melo]
Length = 243
Score = 389 bits (1000), Expect = e-132
Identities = 196/243 (80%), Positives = 218/243 (89%), Gaps = 2/243 (0%)
Frame = +1
Query: 214 MEAKPSTLS--FVDKIVVPGDVVLDLSTMTNQTIKVGGGLRQDCDSISVMRAGKLRFSKP 387
M KPS+ S VD+ VVPGDVVLDLS MTN+TIK+GGGLRQD D+ISV + GKLRFSKP
Sbjct: 1 MVEKPSSSSSTLVDQPVVPGDVVLDLSNMTNETIKLGGGLRQDQDAISVSKVGKLRFSKP 60
Query: 388 NKYWVESSQKRYVPCAEDTVLGIVVDCKADNFFVDIKGPIIAFLPVLAFEGGTRRNIPKF 567
NKYWVESSQKRYVPCAED VLGIV+D +ADNF VDIKGP +AFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVESSQKRYVPCAEDCVLGIVLDSRADNFLVDIKGPSLAFLPVLAFEGGTRRNIPKF 120
Query: 568 EIGSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPACPV 747
E+G+LLYVRVVK NPGMNPEL+CTDASGKAA FGLLKDG+MFE STGLSRMLLSSP CPV
Sbjct: 121 EMGALLYVRVVKVNPGMNPELACTDASGKAAGFGLLKDGFMFECSTGLSRMLLSSPPCPV 180
Query: 748 LEELGKQLSFEIAVGLNGRVWVNAESPSTVVVVSNAIMNSESLSAVQQKIMVDKLLQRIK 927
LE LGK+LSFE A+GLNGRVWVNA+SPST++VVSNAI+NSE+LS VQQ+IMVDKLL +K
Sbjct: 181 LESLGKKLSFETAIGLNGRVWVNADSPSTIIVVSNAILNSETLSGVQQRIMVDKLLANLK 240
Query: 928 *SS 936
SS
Sbjct: 241 LSS 243
>OMO81471.1 Exosome complex RNA-binding protein 1/RRP40/RRP4 [Corchorus
capsularis]
Length = 240
Score = 389 bits (999), Expect = e-132
Identities = 192/233 (82%), Positives = 211/233 (90%)
Frame = +1
Query: 229 STLSFVDKIVVPGDVVLDLSTMTNQTIKVGGGLRQDCDSISVMRAGKLRFSKPNKYWVES 408
S SF+D VVPGDVVLDLS+MTNQTIK+GGGLRQDCD+ISVM+AG LRF+KPNKYWVES
Sbjct: 8 SPASFIDSTVVPGDVVLDLSSMTNQTIKLGGGLRQDCDAISVMKAGTLRFTKPNKYWVES 67
Query: 409 SQKRYVPCAEDTVLGIVVDCKADNFFVDIKGPIIAFLPVLAFEGGTRRNIPKFEIGSLLY 588
SQKRYVPC EDTVLGIVVD KADN +DIKGP +AFLPVLAFEGGTRRNIPKFE+G+LLY
Sbjct: 68 SQKRYVPCVEDTVLGIVVDSKADNLLIDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLLY 127
Query: 589 VRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPACPVLEELGKQ 768
+RVVKAN GMNPELSCTDASGKAAEFG LKDGYMFETSTGLSR LLSSP CPVLE LGK+
Sbjct: 128 LRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPTCPVLEALGKK 187
Query: 769 LSFEIAVGLNGRVWVNAESPSTVVVVSNAIMNSESLSAVQQKIMVDKLLQRIK 927
+SFEIAVGLNGR WVNA SP T++VV+NAIMNSESLSA QQ IMV+ LL+ I+
Sbjct: 188 ISFEIAVGLNGRAWVNAASPETIIVVANAIMNSESLSAAQQIIMVEHLLKNIE 240
>XP_008364612.1 PREDICTED: LOW QUALITY PROTEIN: putative exosome complex component
rrp40 [Malus domestica]
Length = 243
Score = 389 bits (999), Expect = e-132
Identities = 193/243 (79%), Positives = 217/243 (89%), Gaps = 2/243 (0%)
Frame = +1
Query: 214 MEAKPS--TLSFVDKIVVPGDVVLDLSTMTNQTIKVGGGLRQDCDSISVMRAGKLRFSKP 387
ME KPS SF+DK V+PGDVVLDLS MTNQTIK+GGGLRQD DS S M+AG LRF+KP
Sbjct: 1 MEEKPSGSPASFIDKPVIPGDVVLDLSDMTNQTIKLGGGLRQDFDSXSAMKAGTLRFTKP 60
Query: 388 NKYWVESSQKRYVPCAEDTVLGIVVDCKADNFFVDIKGPIIAFLPVLAFEGGTRRNIPKF 567
NKYWVE+SQKRYVPC D+VLGIV D +ADNF VDIKGP +A+LPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVETSQKRYVPCVGDSVLGIVADSRADNFLVDIKGPTLAYLPVLAFEGGTRRNIPKF 120
Query: 568 EIGSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPACPV 747
E+G+LLYVRVVKANPGMNPELSCTDASGKAAE+G+LKDGY F+ STGLSRMLL SP CPV
Sbjct: 121 EVGTLLYVRVVKANPGMNPELSCTDASGKAAEYGVLKDGYNFDCSTGLSRMLLRSPRCPV 180
Query: 748 LEELGKQLSFEIAVGLNGRVWVNAESPSTVVVVSNAIMNSESLSAVQQKIMVDKLLQRIK 927
LEELGK++SFEIAVGLNGRVWVNA SPS ++VVSNAIMNSESL+ VQQ+IMVDKL+Q +K
Sbjct: 181 LEELGKKISFEIAVGLNGRVWVNAGSPSLIIVVSNAIMNSESLTGVQQRIMVDKLIQNLK 240
Query: 928 *SS 936
S+
Sbjct: 241 LST 243
>XP_012568723.1 PREDICTED: putative exosome complex component rrp40 [Cicer
arietinum] XP_012568724.1 PREDICTED: putative exosome
complex component rrp40 [Cicer arietinum] XP_012568725.1
PREDICTED: putative exosome complex component rrp40
[Cicer arietinum]
Length = 237
Score = 389 bits (998), Expect = e-132
Identities = 194/238 (81%), Positives = 217/238 (91%)
Frame = +1
Query: 214 MEAKPSTLSFVDKIVVPGDVVLDLSTMTNQTIKVGGGLRQDCDSISVMRAGKLRFSKPNK 393
ME K ST + +D++V PGDVVLDLSTMTNQTIK+GGGLRQD D ISVM+AG+LRFSKPNK
Sbjct: 1 MENKSST-NLLDQLVYPGDVVLDLSTMTNQTIKLGGGLRQDDDVISVMKAGRLRFSKPNK 59
Query: 394 YWVESSQKRYVPCAEDTVLGIVVDCKADNFFVDIKGPIIAFLPVLAFEGGTRRNIPKFEI 573
YWVE+SQKRYVP AED+VLGIVVD ++DNF VDIKGP +AFLPVLAFEGGTRRNIPKFE
Sbjct: 60 YWVENSQKRYVPHAEDSVLGIVVDSRSDNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEA 119
Query: 574 GSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPACPVLE 753
G+LLYVRVVKANPGMNPELSCTDASGKA EFG LK+GYMFE STGLSRMLLSSP CPVL+
Sbjct: 120 GTLLYVRVVKANPGMNPELSCTDASGKAGEFGALKEGYMFECSTGLSRMLLSSPTCPVLD 179
Query: 754 ELGKQLSFEIAVGLNGRVWVNAESPSTVVVVSNAIMNSESLSAVQQKIMVDKLLQRIK 927
LGK+LSFEIAVGLNGRVWVNA SPST ++V+NAIMNSE+LS VQQKIM +KLLQR++
Sbjct: 180 TLGKKLSFEIAVGLNGRVWVNASSPSTTIIVANAIMNSETLSGVQQKIMAEKLLQRVQ 237