BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00006943
         (1714 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006492554.1 PREDICTED: regulator of nonsense transcripts UPF3...   330   e-103
XP_006431585.1 hypothetical protein CICLE_v10000901mg [Citrus cl...   328   e-102
XP_010657967.1 PREDICTED: regulator of nonsense transcripts UPF3...   257   3e-75
XP_015579220.1 PREDICTED: regulator of nonsense transcripts UPF3...   253   4e-74
XP_018817866.1 PREDICTED: regulator of nonsense transcripts UPF3...   251   8e-73
GAV63295.1 Smg4_UPF3 domain-containing protein [Cephalotus folli...   248   9e-72
XP_007221816.1 hypothetical protein PRUPE_ppa004923mg [Prunus pe...   243   2e-70
XP_007041200.2 PREDICTED: regulator of nonsense transcripts UPF3...   243   4e-70
EOX97031.1 Smg-4/UPF3 family protein, putative isoform 1 [Theobr...   243   4e-70
XP_007041201.2 PREDICTED: regulator of nonsense transcripts UPF3...   243   5e-70
XP_019079129.1 PREDICTED: regulator of nonsense transcripts UPF3...   242   2e-69
XP_019079128.1 PREDICTED: regulator of nonsense transcripts UPF3...   242   2e-69
XP_019079126.1 PREDICTED: regulator of nonsense transcripts UPF3...   242   2e-69
XP_012066696.1 PREDICTED: regulator of nonsense transcripts UPF3...   241   2e-69
XP_012066695.1 PREDICTED: regulator of nonsense transcripts UPF3...   241   2e-69
XP_018811002.1 PREDICTED: regulator of nonsense transcripts UPF3...   236   2e-67
XP_015579218.1 PREDICTED: regulator of nonsense transcripts UPF3...   236   2e-67
XP_015579219.1 PREDICTED: regulator of nonsense transcripts UPF3...   235   8e-67
OMO92296.1 Regulator of nonsense-mediated decay, UPF3 [Corchorus...   234   1e-66
XP_007221815.1 hypothetical protein PRUPE_ppa004923mg [Prunus pe...   233   1e-66

>XP_006492554.1 PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus
            sinensis]
          Length = 514

 Score =  330 bits (847), Expect = e-103
 Identities = 200/379 (52%), Positives = 210/379 (55%), Gaps = 36/379 (9%)
 Frame = +2

Query: 2    LPSAEIQLXXXXXXXXXXXXXTLIVTPLMDFVRQNRAAKAGPRRLLSNGKLXXXXXXXXX 181
            LPSAEIQL              LIVTPLMDFVRQ RAAKAGPRRLLSNGKL         
Sbjct: 132  LPSAEIQLERREAERAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLSNGKLSRRASGSST 191

Query: 182  XXXXXXXXXXXXXXXXXXTAMYVLRDSAKNSNGKDKSTYILVSKRDDQGFDKPVSSTSAM 361
                              T MYVLRD+AKNS+GKDKSTYILV KRDDQ FDKPVSS+SA 
Sbjct: 192  GSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDDQDFDKPVSSSSAT 251

Query: 362  ASEVVKEESGVSANSNAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILGSHSLKQNQ 541
             SEVV EESGV ANS+            EREI               KNI+ S +LKQNQ
Sbjct: 252  GSEVVLEESGVPANSDGGKKKVLLLKGKEREISQVSGSVSHQQSASVKNIISSPALKQNQ 311

Query: 542  XXXXXXXXXXXXLLNKDARQSQA---EQQMQNSNLEKDKRPPLPPHVQLVVKDTNGVPDD 712
                        LLNKDARQ+QA     + Q SNLEKDKRPP P HV LV+KDTNGV DD
Sbjct: 312  RRENSGRIIRGILLNKDARQNQASGLHSEQQISNLEKDKRPPRPSHVHLVMKDTNGVSDD 371

Query: 713  KLIVNDLHCEKQERRTRNKDRPDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXXXXXEG- 889
            K+IVNDLH EKQERRTRNKDRPDR  WTLRR                          EG 
Sbjct: 372  KVIVNDLHSEKQERRTRNKDRPDRAAWTLRRSDGSYQSDESLSSSASQLSLSAVDSSEGN 431

Query: 890  --------------------------------SHRHIGRRGPIHGVKDDSSSVSSEGKPL 973
                                            SHRHIGRRGP H VKDDSS V SEGKPL
Sbjct: 432  LGDGKFDLSNMRSGEVKAVGGGRSSHSSVDNGSHRHIGRRGPTH-VKDDSSPVMSEGKPL 490

Query: 974  RRGSASGYGPHEKQVWVQK 1030
            RRG ASGYG HEKQVWVQK
Sbjct: 491  RRGGASGYGSHEKQVWVQK 509


>XP_006431585.1 hypothetical protein CICLE_v10000901mg [Citrus clementina] ESR44825.1
            hypothetical protein CICLE_v10000901mg [Citrus
            clementina]
          Length = 514

 Score =  328 bits (842), Expect = e-102
 Identities = 199/379 (52%), Positives = 209/379 (55%), Gaps = 36/379 (9%)
 Frame = +2

Query: 2    LPSAEIQLXXXXXXXXXXXXXTLIVTPLMDFVRQNRAAKAGPRRLLSNGKLXXXXXXXXX 181
            LPSAEIQL              LIVTPLMDFVRQ RAAKAGPRRLLSNGKL         
Sbjct: 132  LPSAEIQLERREAERAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLSNGKLSRRASGSST 191

Query: 182  XXXXXXXXXXXXXXXXXXTAMYVLRDSAKNSNGKDKSTYILVSKRDDQGFDKPVSSTSAM 361
                              T MYVLRD+AKNS+GKDKSTYILV KRDDQ FDKPVSS+SA 
Sbjct: 192  GSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDDQDFDKPVSSSSAT 251

Query: 362  ASEVVKEESGVSANSNAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILGSHSLKQNQ 541
             SEVV EESGV ANS+            EREI               K I+ S +LKQNQ
Sbjct: 252  GSEVVLEESGVPANSDGGKKKVLLLKGKEREISQVSGSVSHQQSASVKTIISSPALKQNQ 311

Query: 542  XXXXXXXXXXXXLLNKDARQSQA---EQQMQNSNLEKDKRPPLPPHVQLVVKDTNGVPDD 712
                        LLNKDARQ+QA     + Q SNLEKDKRPP P HVQLV+KDTNGV DD
Sbjct: 312  RRENSGRIIRGILLNKDARQNQASGLHSEQQISNLEKDKRPPRPSHVQLVMKDTNGVSDD 371

Query: 713  KLIVNDLHCEKQERRTRNKDRPDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXXXXXEG- 889
            K+IVNDLH EKQERRTRNKDRPDR  WTLRR                          EG 
Sbjct: 372  KVIVNDLHSEKQERRTRNKDRPDRAAWTLRRSDGSYQSDESLSSSASQLSLSAVDSSEGN 431

Query: 890  --------------------------------SHRHIGRRGPIHGVKDDSSSVSSEGKPL 973
                                            SHRHIGRRGP H VKDD S V SEGKPL
Sbjct: 432  LGDGKFDLSNMRSGEVKAVGGGRSSHSSVDNGSHRHIGRRGPTH-VKDDGSPVMSEGKPL 490

Query: 974  RRGSASGYGPHEKQVWVQK 1030
            RRG ASGYG HEKQVWVQK
Sbjct: 491  RRGGASGYGSHEKQVWVQK 509


>XP_010657967.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X4 [Vitis
            vinifera] CBI29694.3 unnamed protein product, partial
            [Vitis vinifera]
          Length = 519

 Score =  257 bits (657), Expect = 3e-75
 Identities = 173/387 (44%), Positives = 199/387 (51%), Gaps = 44/387 (11%)
 Frame = +2

Query: 2    LPSAEIQLXXXXXXXXXXXXXTLIVTPLMDFVRQNRAAKAGPRRLLSNGKLXXXXXXXXX 181
            LPSAEIQL             T IVTPLMDFVRQ RAAK   RR LSNGKL         
Sbjct: 132  LPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNGKLSRRASGSSS 191

Query: 182  XXXXXXXXXXXXXXXXXXTAMYVLRDSAKNSNGKDKSTYILVSKRDDQGF-DKPVSSTSA 358
                              T MYVLRD+AK+++ KDKST+ILV KRDDQ   DK V+  + 
Sbjct: 192  GNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAG 251

Query: 359  MASEVVKEESGVSANSNAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILGSHSLKQN 538
              +E ++EESGVS   +A           EREI               KNILG+++ KQN
Sbjct: 252  GGAEALEEESGVSGAVDAGKKKVLLLKGKEREISHHLLQQNVTSPV--KNILGANAPKQN 309

Query: 539  QXXXXXXXXXXXXLLNKDARQSQA-----EQQMQNSNLEKDKRPPLPPHVQLVVKDTNGV 703
            Q            LLNKDARQSQ+     EQQ Q SNLEK+KRPP PPH+QL  K+TNG 
Sbjct: 310  QRREGSGRIIRSILLNKDARQSQSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGA 369

Query: 704  PDDKLIVNDLH---CEKQERRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXX 871
             DDK++ ND+H    EKQ++RTRNKDRPDRGVWT LRR                      
Sbjct: 370  QDDKVVGNDVHSFVSEKQDKRTRNKDRPDRGVWTPLRR--SDGSHASDESLSSSASQPTS 427

Query: 872  XXXXEGSH---------------------------------RHIGRRGPIHGVKD-DSSS 949
                EGSH                                 +H GRRGP H VKD D SS
Sbjct: 428  SDFPEGSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSS 487

Query: 950  VSSEGKPLRRGSASGYGPHEKQVWVQK 1030
            + SEGK  +RGSA GYG HEKQVWVQK
Sbjct: 488  IVSEGKHSKRGSAPGYGSHEKQVWVQK 514


>XP_015579220.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X3 [Ricinus
            communis]
          Length = 494

 Score =  253 bits (647), Expect = 4e-74
 Identities = 164/355 (46%), Positives = 194/355 (54%), Gaps = 12/355 (3%)
 Frame = +2

Query: 2    LPSAEIQLXXXXXXXXXXXXXTL-IVTPLMDFVRQNRAAKAGPRRLLSNGKLXXXXXXXX 178
            LPSAEIQL                IVTPLMDFVRQ RAAK G RR+LSNGK+        
Sbjct: 138  LPSAEIQLERREAERAASAAKDAPIVTPLMDFVRQKRAAKTGSRRILSNGKISRRSGASG 197

Query: 179  XXXXXXXXXXXXXXXXXXXTAMYVLRDSAKNSNGKDKSTYILVSKRDDQGF-DKPVSSTS 355
                                 MYVLRDSAK+++GKDKSTY+LV KRDDQ F DK     S
Sbjct: 198  SPSSSSSKRSSEKKRVS--ATMYVLRDSAKSTSGKDKSTYLLVPKRDDQQFSDKSTPFAS 255

Query: 356  AMASEVVKEESGVSANSNAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILGSHSLKQ 535
            A  +EV+++ESGVS  ++            E+EI                  + S ++KQ
Sbjct: 256  ASGTEVLEDESGVSGITDTGKKKILLLKGKEKEISALSGGMSKQNAASFDKNVTSSAIKQ 315

Query: 536  NQXXXXXXXXXXXXLLNKDARQSQA-----EQQMQNSNLEKDKRPPLPPHVQLVVKDTNG 700
            +Q            LLNKD+RQ+Q+     EQQ+Q+SNLEK+KR P P HVQLV+KD NG
Sbjct: 316  SQRRESSGRIIRSILLNKDSRQNQSSGFQSEQQIQSSNLEKEKRLPRPAHVQLVLKDVNG 375

Query: 701  VPDDKLIVNDLH---CEKQERRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXX 868
              DDK + NDLH    EKQE+RTRNKDRPDR VWT LRR                     
Sbjct: 376  SSDDKFVGNDLHGFSGEKQEKRTRNKDRPDRVVWTPLRRSDGSYASDESLSSSASQSTHT 435

Query: 869  XXXXXEGSHRHIGRRGPIHGVKDDSSSVSSEGKPLRR-GSASGYGPHEKQVWVQK 1030
                 +GSH+H GRRGP H V+D   S S EGKP +R G ASGYG HEKQVWVQK
Sbjct: 436  GQDSSQGSHKHFGRRGPSHTVRDADGS-SLEGKPSKRGGGASGYGSHEKQVWVQK 489


>XP_018817866.1 PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
            [Juglans regia]
          Length = 531

 Score =  251 bits (641), Expect = 8e-73
 Identities = 160/356 (44%), Positives = 189/356 (53%), Gaps = 13/356 (3%)
 Frame = +2

Query: 2    LPSAEIQLXXXXXXXXXXXXXTLIVTPLMDFVRQNRAAKAGPRRLLSNGKLXXXXXXXXX 181
            LPSAE+QL               +VTPLMDFVRQ RAAK G RR LSNGK+         
Sbjct: 174  LPSAEVQLERREAERGGVVKDAPVVTPLMDFVRQKRAAKGGSRRSLSNGKMSRRSARSSA 233

Query: 182  XXXXXXXXXXXXXXXXXXTAMYVLRDSAKNSNGKDKSTYILVSKRDDQGF-DKPVSSTSA 358
                              + MYVLRD+AKN + KDKSTYIL+ KRDD+   DK V+   A
Sbjct: 234  GSPSSSSSKRGSARIRMSSTMYVLRDAAKNMSVKDKSTYILIPKRDDEQLSDKAVTLVPA 293

Query: 359  MASEVVKEESGVSANSNAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXK--NILGSHSLK 532
              +EV+ EESG+S   N            EREI                  N +GS +LK
Sbjct: 294  AGTEVLAEESGISG-PNESGRKKLLLKGKEREISHVSGSLSQQQGLTSSAGNTIGSAALK 352

Query: 533  QNQXXXXXXXXXXXXLLNKDARQSQA-----EQQMQNSNLEKDKRPPLPPHVQLVVKDTN 697
            QNQ            LLNKD+ Q+Q+     EQQ+Q SNLEKDKRPP PPHVQ V KDT 
Sbjct: 353  QNQQRQGGGRIVRRILLNKDSCQNQSFLGLSEQQIQTSNLEKDKRPPRPPHVQSVSKDTI 412

Query: 698  GVPDDKLIVNDLH---CEKQERRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXX 865
              PDDK++ NDLH    E+QE+ +RNKD+P+ GVWT  RR                    
Sbjct: 413  PTPDDKVVGNDLHRFFKERQEKHSRNKDKPEHGVWTSRRRSDGSNVNDESLLSSASQLSL 472

Query: 866  XXXXXXEGSHRHIGRRGPIHGVKD-DSSSVSSEGKPLRRGSASGYGPHEKQVWVQK 1030
                  EGSH+H GRRGP HGVKD D SS  SEGK  R+G  +GY  HEKQVW+QK
Sbjct: 473  SPADSSEGSHKHFGRRGPAHGVKDVDGSSTMSEGKHSRKG--TGYNSHEKQVWIQK 526


>GAV63295.1 Smg4_UPF3 domain-containing protein [Cephalotus follicularis]
          Length = 522

 Score =  248 bits (633), Expect = 9e-72
 Identities = 165/387 (42%), Positives = 197/387 (50%), Gaps = 44/387 (11%)
 Frame = +2

Query: 2    LPSAEIQLXXXXXXXXXXXXXTLIVTPLMDFVRQNRAAKAGPRRLLSNGKLXXXXXXXXX 181
            LPSAEIQL               +VTPLMDFVRQ RA K   RR L NGKL         
Sbjct: 134  LPSAEIQLERKEAERAGAAKEAPVVTPLMDFVRQKRATKGVSRRSLPNGKLSRRAVGSLG 193

Query: 182  XXXXXXXXXXXXXXXXXXTAMYVLRDSAKNSNGKDKSTYILVSKRDD-QGFDKPVSSTSA 358
                              T MYVLRD  K+S+GKDK T+IL+SKRDD Q  +KP+++  A
Sbjct: 194  GSSSLASSKRGSERRRNSTTMYVLRDPTKSSSGKDKPTHILLSKRDDHQPSEKPLAA--A 251

Query: 359  MASEVVKEESGVSANSNAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILGSHSLKQN 538
               E V++ESGVS  ++A           EREI                N+LGS +LKQN
Sbjct: 252  AGREPVEDESGVSGITDAGKKKLLLKGK-EREISDVSGMQPHNVTISVSNVLGSTALKQN 310

Query: 539  QXXXXXXXXXXXXLLNKDARQSQA-----EQQMQNSNLEKDKRPPLPPHVQLVVKDTNGV 703
            Q            +LN+D RQSQ+     EQ+ Q+SNL+KDKRPP P H+Q+V+KDTNG 
Sbjct: 311  QRREGNGKFNRAIVLNRDTRQSQSSGFQSEQKFQSSNLDKDKRPPRPHHMQMVLKDTNGA 370

Query: 704  PDDKLIVNDLH---CEKQERRTRNKDRPDRGVWTLRR-XXXXXXXXXXXXXXXXXXXXXX 871
            P+DK I NDLH    EK E+RTRNKD+PDRGVWTLRR                       
Sbjct: 371  PEDKAITNDLHGASSEKIEKRTRNKDKPDRGVWTLRRSDGSYASDESLSSSASQPPPQLQ 430

Query: 872  XXXXEGSH---------------------------------RHIGRRGPIHGVKD-DSSS 949
                EGSH                                 +H+GRRGP   VKD D S 
Sbjct: 431  LDSLEGSHGDVKVDISITRTGEVRNLGTLRSSHSSIDNGSYKHVGRRGPTLSVKDADGSL 490

Query: 950  VSSEGKPLRRGSASGYGPHEKQVWVQK 1030
            V+S+GKPL+RG ASGY  HEKQVWVQK
Sbjct: 491  VASDGKPLKRGGASGYVSHEKQVWVQK 517


>XP_007221816.1 hypothetical protein PRUPE_ppa004923mg [Prunus persica] ONI36328.1
            hypothetical protein PRUPE_1G581100 [Prunus persica]
            ONI36329.1 hypothetical protein PRUPE_1G581100 [Prunus
            persica]
          Length = 485

 Score =  243 bits (621), Expect = 2e-70
 Identities = 157/353 (44%), Positives = 185/353 (52%), Gaps = 10/353 (2%)
 Frame = +2

Query: 2    LPSAEIQLXXXXXXXXXXXXXTLIVTPLMDFVRQNRAAKAGPRRLLSNGKLXXXXXXXXX 181
            LPSAEIQL               IVTPLMDFVRQ RA+KAG RR L+NGK          
Sbjct: 133  LPSAEIQLERREAERSGAGKDAPIVTPLMDFVRQKRASKAGSRRSLTNGKTSRRAGGPSS 192

Query: 182  XXXXXXXXXXXXXXXXXXTAMYVLRDSAKNSNGKDKSTYILVSKRDD-QGFDKPVSSTSA 358
                                MYVLRD+ KN++ KDKSTYILV KRDD Q  +K V+  SA
Sbjct: 193  RSPSLATSKRGSERKRNSATMYVLRDARKNTSAKDKSTYILVPKRDDQQPSEKSVTLASA 252

Query: 359  MASEVVKEESGVSANSNAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILGSHSLKQN 538
              + V++EESGVS  ++A           EREI               KN+ G+ +LKQN
Sbjct: 253  AGTHVLEEESGVS-GADAVKKKILLLKGKEREITHVPANMSQQQSSSAKNMGGTIALKQN 311

Query: 539  QXXXXXXXXXXXXLLNKDARQSQAE-----QQMQNSNLEKDKRPPLPPHVQLVVKDTNGV 703
                         LLNKDARQSQ+      QQ+Q SN ++DKRPP   HVQL++KDTNG 
Sbjct: 312  LRRQENGRIIRGILLNKDARQSQSSGIYSAQQIQTSNSDRDKRPPRSQHVQLILKDTNGA 371

Query: 704  PDDKLIVNDLH---CEKQERRTRNKDRPDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXX 874
            PD  ++ NDLH    EKQE+R RNK+RPDR VWT                          
Sbjct: 372  PDYNIVGNDLHGICSEKQEKRIRNKERPDRVVWTPLNRLDGSSASDESLSSAFQPAHSLL 431

Query: 875  XXXEGSHRHIGRRGPIHGVKD-DSSSVSSEGKPLRRGSASGYGPHEKQVWVQK 1030
               EG H+H GRRG  HGVKD D S V+ EGK  +R    GYG HEKQVWVQK
Sbjct: 432  DSSEGCHKHHGRRGTTHGVKDLDGSPVAGEGKHSKR----GYGSHEKQVWVQK 480


>XP_007041200.2 PREDICTED: regulator of nonsense transcripts UPF3 isoform X2
            [Theobroma cacao]
          Length = 514

 Score =  243 bits (621), Expect = 4e-70
 Identities = 165/384 (42%), Positives = 192/384 (50%), Gaps = 41/384 (10%)
 Frame = +2

Query: 2    LPSAEIQLXXXXXXXXXXXXXTLIVTPLMDFVRQNRAAKAGPRRLLSNGKLXXXXXXXXX 181
            LPSAEIQL             T IVTPLMDFVRQ RAAK G RR LSNGKL         
Sbjct: 132  LPSAEIQLERKEAERAGVPKDTPIVTPLMDFVRQKRAAKGGSRRSLSNGKLSRRAGGSSG 191

Query: 182  XXXXXXXXXXXXXXXXXXTAMYVLRDSAKNSNGKDKSTYILVSKRDDQGF-DKPVSSTSA 358
                              T MYVLRDS KN++GKDKSTYILVSKRD+Q   DK V+  S+
Sbjct: 192  GTPSSASSKRGSEKRRGSTTMYVLRDSLKNASGKDKSTYILVSKRDEQQLSDKHVALASS 251

Query: 359  MASEVVKEESGVSANSNAXXXXXXXXXXXEREIXXXXXXXXXXXXXXX--KNILGSHSLK 532
            M +E+ +EESGV   ++A           E+EI                 K ILGS   K
Sbjct: 252  MGTEISEEESGVPGITDAVKKKVLLLKGKEKEISPVAGNVLHQQNATSPIKTILGSTPTK 311

Query: 533  QNQXXXXXXXXXXXXLLNKDARQSQA-----EQQMQNSNLEKDKRPPLPPHVQLVVKDTN 697
            QN             LLNKDARQ+Q+     EQQ++ SNLEKD+RPP   H  LV+KDTN
Sbjct: 312  QNSRREGRMIRGI--LLNKDARQNQSSGVQSEQQIRTSNLEKDRRPPRHSHSHLVLKDTN 369

Query: 698  GVPDDKLIVNDLH-CEKQERRTRNKDRPDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXX 874
               DDK++ NDLH  EK ERR RNKDRPDRGVWTLRR                       
Sbjct: 370  TASDDKVVGNDLHGSEKPERRCRNKDRPDRGVWTLRRSDGSYASDESMSSSASQSALIPL 429

Query: 875  XXXEGSH--------------------------------RHIGRRGPIHGVKDDSSSVSS 958
               EG++                                +H+ RRG +     D SSV S
Sbjct: 430  DPLEGTYGDTKVDLSNVRSVQVKTVGSGRNSSLDNGSHNKHVSRRGAV----ADGSSVMS 485

Query: 959  EGKPLRRGSASGYGPHEKQVWVQK 1030
            +GKP +RG A+GYG HEKQVWVQK
Sbjct: 486  DGKPGKRGCAAGYGSHEKQVWVQK 509


>EOX97031.1 Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
          Length = 514

 Score =  243 bits (621), Expect = 4e-70
 Identities = 165/384 (42%), Positives = 192/384 (50%), Gaps = 41/384 (10%)
 Frame = +2

Query: 2    LPSAEIQLXXXXXXXXXXXXXTLIVTPLMDFVRQNRAAKAGPRRLLSNGKLXXXXXXXXX 181
            LPSAEIQL             T IVTPLMDFVRQ RAAK G RR LSNGKL         
Sbjct: 132  LPSAEIQLERKEAERAGVPKDTPIVTPLMDFVRQKRAAKGGSRRSLSNGKLSRRAGGSSG 191

Query: 182  XXXXXXXXXXXXXXXXXXTAMYVLRDSAKNSNGKDKSTYILVSKRDDQGF-DKPVSSTSA 358
                              T MYVLRDS KN++GKDKSTYILVSKRD+Q   DK V+  S+
Sbjct: 192  GTPSSASSKRGSEKRRGSTTMYVLRDSLKNASGKDKSTYILVSKRDEQQLSDKHVALASS 251

Query: 359  MASEVVKEESGVSANSNAXXXXXXXXXXXEREIXXXXXXXXXXXXXXX--KNILGSHSLK 532
            M +E+ +EESGV   ++A           E+EI                 K ILGS   K
Sbjct: 252  MGTEISEEESGVPGITDAVKKKVLLLKGKEKEISPVAGNVLHQQNVTSPIKTILGSTPTK 311

Query: 533  QNQXXXXXXXXXXXXLLNKDARQSQA-----EQQMQNSNLEKDKRPPLPPHVQLVVKDTN 697
            QN             LLNKDARQ+Q+     EQQ++ SNLEKD+RPP   H  LV+KDTN
Sbjct: 312  QNSRREGRMIRGI--LLNKDARQNQSSGVQSEQQIRTSNLEKDRRPPRHSHSHLVLKDTN 369

Query: 698  GVPDDKLIVNDLH-CEKQERRTRNKDRPDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXX 874
               DDK++ NDLH  EK ERR RNKDRPDRGVWTLRR                       
Sbjct: 370  TASDDKVVGNDLHGSEKPERRCRNKDRPDRGVWTLRRSDGSYASDESMSSSASQSALIPL 429

Query: 875  XXXEGSH--------------------------------RHIGRRGPIHGVKDDSSSVSS 958
               EG++                                +H+ RRG +     D SSV S
Sbjct: 430  DPLEGTYGDTKVDLSNVRSVQVKTVGSGRNSSLDNGSHNKHVSRRGAV----ADGSSVMS 485

Query: 959  EGKPLRRGSASGYGPHEKQVWVQK 1030
            +GKP +RG A+GYG HEKQVWVQK
Sbjct: 486  DGKPGKRGCAAGYGSHEKQVWVQK 509


>XP_007041201.2 PREDICTED: regulator of nonsense transcripts UPF3 isoform X1
            [Theobroma cacao]
          Length = 521

 Score =  243 bits (621), Expect = 5e-70
 Identities = 165/384 (42%), Positives = 192/384 (50%), Gaps = 41/384 (10%)
 Frame = +2

Query: 2    LPSAEIQLXXXXXXXXXXXXXTLIVTPLMDFVRQNRAAKAGPRRLLSNGKLXXXXXXXXX 181
            LPSAEIQL             T IVTPLMDFVRQ RAAK G RR LSNGKL         
Sbjct: 139  LPSAEIQLERKEAERAGVPKDTPIVTPLMDFVRQKRAAKGGSRRSLSNGKLSRRAGGSSG 198

Query: 182  XXXXXXXXXXXXXXXXXXTAMYVLRDSAKNSNGKDKSTYILVSKRDDQGF-DKPVSSTSA 358
                              T MYVLRDS KN++GKDKSTYILVSKRD+Q   DK V+  S+
Sbjct: 199  GTPSSASSKRGSEKRRGSTTMYVLRDSLKNASGKDKSTYILVSKRDEQQLSDKHVALASS 258

Query: 359  MASEVVKEESGVSANSNAXXXXXXXXXXXEREIXXXXXXXXXXXXXXX--KNILGSHSLK 532
            M +E+ +EESGV   ++A           E+EI                 K ILGS   K
Sbjct: 259  MGTEISEEESGVPGITDAVKKKVLLLKGKEKEISPVAGNVLHQQNATSPIKTILGSTPTK 318

Query: 533  QNQXXXXXXXXXXXXLLNKDARQSQA-----EQQMQNSNLEKDKRPPLPPHVQLVVKDTN 697
            QN             LLNKDARQ+Q+     EQQ++ SNLEKD+RPP   H  LV+KDTN
Sbjct: 319  QNSRREGRMIRGI--LLNKDARQNQSSGVQSEQQIRTSNLEKDRRPPRHSHSHLVLKDTN 376

Query: 698  GVPDDKLIVNDLH-CEKQERRTRNKDRPDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXX 874
               DDK++ NDLH  EK ERR RNKDRPDRGVWTLRR                       
Sbjct: 377  TASDDKVVGNDLHGSEKPERRCRNKDRPDRGVWTLRRSDGSYASDESMSSSASQSALIPL 436

Query: 875  XXXEGSH--------------------------------RHIGRRGPIHGVKDDSSSVSS 958
               EG++                                +H+ RRG +     D SSV S
Sbjct: 437  DPLEGTYGDTKVDLSNVRSVQVKTVGSGRNSSLDNGSHNKHVSRRGAV----ADGSSVMS 492

Query: 959  EGKPLRRGSASGYGPHEKQVWVQK 1030
            +GKP +RG A+GYG HEKQVWVQK
Sbjct: 493  DGKPGKRGCAAGYGSHEKQVWVQK 516


>XP_019079129.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X3 [Vitis
            vinifera]
          Length = 528

 Score =  242 bits (618), Expect = 2e-69
 Identities = 166/380 (43%), Positives = 192/380 (50%), Gaps = 44/380 (11%)
 Frame = +2

Query: 2    LPSAEIQLXXXXXXXXXXXXXTLIVTPLMDFVRQNRAAKAGPRRLLSNGKLXXXXXXXXX 181
            LPSAEIQL             T IVTPLMDFVRQ RAAK   RR LSNGKL         
Sbjct: 132  LPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNGKLSRRASGSSS 191

Query: 182  XXXXXXXXXXXXXXXXXXTAMYVLRDSAKNSNGKDKSTYILVSKRDDQGF-DKPVSSTSA 358
                              T MYVLRD+AK+++ KDKST+ILV KRDDQ   DK V+  + 
Sbjct: 192  GNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAG 251

Query: 359  MASEVVKEESGVSANSNAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILGSHSLKQN 538
              +E ++EESGVS   +A           EREI               KNILG+++ KQN
Sbjct: 252  GGAEALEEESGVSGAVDAGKKKVLLLKGKEREISHNVTSPV-------KNILGANAPKQN 304

Query: 539  QXXXXXXXXXXXXLLNKDARQSQA-----EQQMQNSNLEKDKRPPLPPHVQLVVKDTNGV 703
            Q            LLNKDARQSQ+     EQQ Q SNLEK+KRPP PPH+QL  K+TNG 
Sbjct: 305  QRREGSGRIIRSILLNKDARQSQSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGA 364

Query: 704  PDDKLIVNDLH---CEKQERRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXX 871
             DDK++ ND+H    EKQ++RTRNKDRPDRGVWT LRR                      
Sbjct: 365  QDDKVVGNDVHSFVSEKQDKRTRNKDRPDRGVWTPLRR--SDGSHASDESLSSSASQPTS 422

Query: 872  XXXXEGSH---------------------------------RHIGRRGPIHGVKD-DSSS 949
                EGSH                                 +H GRRGP H VKD D SS
Sbjct: 423  SDFPEGSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSS 482

Query: 950  VSSEGKPLRRGSASGYGPHE 1009
            + SEGK  +RGSA GYG HE
Sbjct: 483  IVSEGKHSKRGSAPGYGSHE 502


>XP_019079128.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X2 [Vitis
            vinifera]
          Length = 529

 Score =  242 bits (618), Expect = 2e-69
 Identities = 166/380 (43%), Positives = 192/380 (50%), Gaps = 44/380 (11%)
 Frame = +2

Query: 2    LPSAEIQLXXXXXXXXXXXXXTLIVTPLMDFVRQNRAAKAGPRRLLSNGKLXXXXXXXXX 181
            LPSAEIQL             T IVTPLMDFVRQ RAAK   RR LSNGKL         
Sbjct: 132  LPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNGKLSRRASGSSS 191

Query: 182  XXXXXXXXXXXXXXXXXXTAMYVLRDSAKNSNGKDKSTYILVSKRDDQGF-DKPVSSTSA 358
                              T MYVLRD+AK+++ KDKST+ILV KRDDQ   DK V+  + 
Sbjct: 192  GNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAG 251

Query: 359  MASEVVKEESGVSANSNAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILGSHSLKQN 538
              +E ++EESGVS   +A           EREI               KNILG+++ KQN
Sbjct: 252  GGAEALEEESGVSGAVDAGKKKVLLLKGKEREISHQNVTSPV------KNILGANAPKQN 305

Query: 539  QXXXXXXXXXXXXLLNKDARQSQA-----EQQMQNSNLEKDKRPPLPPHVQLVVKDTNGV 703
            Q            LLNKDARQSQ+     EQQ Q SNLEK+KRPP PPH+QL  K+TNG 
Sbjct: 306  QRREGSGRIIRSILLNKDARQSQSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGA 365

Query: 704  PDDKLIVNDLH---CEKQERRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXX 871
             DDK++ ND+H    EKQ++RTRNKDRPDRGVWT LRR                      
Sbjct: 366  QDDKVVGNDVHSFVSEKQDKRTRNKDRPDRGVWTPLRR--SDGSHASDESLSSSASQPTS 423

Query: 872  XXXXEGSH---------------------------------RHIGRRGPIHGVKD-DSSS 949
                EGSH                                 +H GRRGP H VKD D SS
Sbjct: 424  SDFPEGSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSS 483

Query: 950  VSSEGKPLRRGSASGYGPHE 1009
            + SEGK  +RGSA GYG HE
Sbjct: 484  IVSEGKHSKRGSAPGYGSHE 503


>XP_019079126.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Vitis
            vinifera] XP_019079127.1 PREDICTED: regulator of nonsense
            transcripts UPF3 isoform X1 [Vitis vinifera]
          Length = 533

 Score =  242 bits (618), Expect = 2e-69
 Identities = 166/380 (43%), Positives = 192/380 (50%), Gaps = 44/380 (11%)
 Frame = +2

Query: 2    LPSAEIQLXXXXXXXXXXXXXTLIVTPLMDFVRQNRAAKAGPRRLLSNGKLXXXXXXXXX 181
            LPSAEIQL             T IVTPLMDFVRQ RAAK   RR LSNGKL         
Sbjct: 132  LPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNGKLSRRASGSSS 191

Query: 182  XXXXXXXXXXXXXXXXXXTAMYVLRDSAKNSNGKDKSTYILVSKRDDQGF-DKPVSSTSA 358
                              T MYVLRD+AK+++ KDKST+ILV KRDDQ   DK V+  + 
Sbjct: 192  GNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAG 251

Query: 359  MASEVVKEESGVSANSNAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILGSHSLKQN 538
              +E ++EESGVS   +A           EREI               KNILG+++ KQN
Sbjct: 252  GGAEALEEESGVSGAVDAGKKKVLLLKGKEREISHHLLQQNVTSPV--KNILGANAPKQN 309

Query: 539  QXXXXXXXXXXXXLLNKDARQSQA-----EQQMQNSNLEKDKRPPLPPHVQLVVKDTNGV 703
            Q            LLNKDARQSQ+     EQQ Q SNLEK+KRPP PPH+QL  K+TNG 
Sbjct: 310  QRREGSGRIIRSILLNKDARQSQSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGA 369

Query: 704  PDDKLIVNDLH---CEKQERRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXX 871
             DDK++ ND+H    EKQ++RTRNKDRPDRGVWT LRR                      
Sbjct: 370  QDDKVVGNDVHSFVSEKQDKRTRNKDRPDRGVWTPLRR--SDGSHASDESLSSSASQPTS 427

Query: 872  XXXXEGSH---------------------------------RHIGRRGPIHGVKD-DSSS 949
                EGSH                                 +H GRRGP H VKD D SS
Sbjct: 428  SDFPEGSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSS 487

Query: 950  VSSEGKPLRRGSASGYGPHE 1009
            + SEGK  +RGSA GYG HE
Sbjct: 488  IVSEGKHSKRGSAPGYGSHE 507


>XP_012066696.1 PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
            [Jatropha curcas]
          Length = 509

 Score =  241 bits (616), Expect = 2e-69
 Identities = 164/385 (42%), Positives = 198/385 (51%), Gaps = 42/385 (10%)
 Frame = +2

Query: 2    LPSAEIQLXXXXXXXXXXXXXTLIVTPLMDFVRQNRAAKAGPRRLLSNGKLXXXXXXXXX 181
            LPSAEIQL               I+TPLMDFVRQ RAAK G RR+L NGKL         
Sbjct: 132  LPSAEIQLERREAERAGIIKDAPIITPLMDFVRQKRAAKTGSRRILGNGKLSRRAGTSGS 191

Query: 182  XXXXXXXXXXXXXXXXXXTAMYVLRDSAKNSNGKDKSTYILVSKRDDQGF-DKPVSSTSA 358
                              T MYVLRD+AK+++GKDKSTYILV KRDDQ   DK V+  +A
Sbjct: 192  PGSSSSKRSSEKKRVS--TTMYVLRDTAKSTSGKDKSTYILVPKRDDQQLSDKAVTLGTA 249

Query: 359  MASEVVKEESGVSANSNAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILGSHSLKQN 538
              +EV+++ESG S  ++A           E+EI               KN++ S ++KQN
Sbjct: 250  SGAEVLEDESGASGITDAGKKKILLLKGKEKEI-------SDNAASFDKNVISS-AVKQN 301

Query: 539  QXXXXXXXXXXXXLLNKDARQS-----QAEQQMQNSNLEKDKRPPLPPHVQLVVKDTNGV 703
            Q            LLNK++RQ+     Q+E QMQ SN EK+KRPP PPHVQLV+ +TNG 
Sbjct: 302  QRREASGRIIRSILLNKESRQNQSSGIQSEHQMQTSNSEKEKRPPRPPHVQLVL-NTNGA 360

Query: 704  PDDKLIVNDLH---CEKQERRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXX 871
             DDK+++NDLH    EKQE+RTRNKDRPDR VWT LRR                      
Sbjct: 361  LDDKVVINDLHGFSGEKQEKRTRNKDRPDRVVWTPLRRSDGSYASDESLSLSASQSTQSG 420

Query: 872  XXXXEG--------------------------------SHRHIGRRGPIHGVKDDSSSVS 955
                +G                                SH+H GRRGP H V+D   S S
Sbjct: 421  VDSSQGNLGDLKVDPSNSRSGEVKTLTGRGSHSSLDNGSHKHFGRRGPSHPVRDADGS-S 479

Query: 956  SEGKPLRRGSASGYGPHEKQVWVQK 1030
             EGK  +RG ASGYG HEKQVWVQK
Sbjct: 480  GEGKASKRGGASGYGSHEKQVWVQK 504


>XP_012066695.1 PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Jatropha curcas] KDP42459.1 hypothetical protein
            JCGZ_00256 [Jatropha curcas]
          Length = 510

 Score =  241 bits (616), Expect = 2e-69
 Identities = 164/385 (42%), Positives = 198/385 (51%), Gaps = 42/385 (10%)
 Frame = +2

Query: 2    LPSAEIQLXXXXXXXXXXXXXTLIVTPLMDFVRQNRAAKAGPRRLLSNGKLXXXXXXXXX 181
            LPSAEIQL               I+TPLMDFVRQ RAAK G RR+L NGKL         
Sbjct: 132  LPSAEIQLERREAERAGIIKDAPIITPLMDFVRQKRAAKTGSRRILGNGKLSRRAGTSGS 191

Query: 182  XXXXXXXXXXXXXXXXXXTAMYVLRDSAKNSNGKDKSTYILVSKRDDQGF-DKPVSSTSA 358
                              T MYVLRD+AK+++GKDKSTYILV KRDDQ   DK V+  +A
Sbjct: 192  PGSSSSKRSSEKKRVS--TTMYVLRDTAKSTSGKDKSTYILVPKRDDQQLSDKAVTLGTA 249

Query: 359  MASEVVKEESGVSANSNAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILGSHSLKQN 538
              +EV+++ESG S  ++A           E+EI               KN++ S ++KQN
Sbjct: 250  SGAEVLEDESGASGITDAGKKKILLLKGKEKEI------SDQNAASFDKNVISS-AVKQN 302

Query: 539  QXXXXXXXXXXXXLLNKDARQS-----QAEQQMQNSNLEKDKRPPLPPHVQLVVKDTNGV 703
            Q            LLNK++RQ+     Q+E QMQ SN EK+KRPP PPHVQLV+ +TNG 
Sbjct: 303  QRREASGRIIRSILLNKESRQNQSSGIQSEHQMQTSNSEKEKRPPRPPHVQLVL-NTNGA 361

Query: 704  PDDKLIVNDLH---CEKQERRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXX 871
             DDK+++NDLH    EKQE+RTRNKDRPDR VWT LRR                      
Sbjct: 362  LDDKVVINDLHGFSGEKQEKRTRNKDRPDRVVWTPLRRSDGSYASDESLSLSASQSTQSG 421

Query: 872  XXXXEG--------------------------------SHRHIGRRGPIHGVKDDSSSVS 955
                +G                                SH+H GRRGP H V+D   S S
Sbjct: 422  VDSSQGNLGDLKVDPSNSRSGEVKTLTGRGSHSSLDNGSHKHFGRRGPSHPVRDADGS-S 480

Query: 956  SEGKPLRRGSASGYGPHEKQVWVQK 1030
             EGK  +RG ASGYG HEKQVWVQK
Sbjct: 481  GEGKASKRGGASGYGSHEKQVWVQK 505


>XP_018811002.1 PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
            [Juglans regia] XP_018811003.1 PREDICTED: regulator of
            nonsense transcripts UPF3-like isoform X2 [Juglans regia]
          Length = 519

 Score =  236 bits (603), Expect = 2e-67
 Identities = 161/387 (41%), Positives = 190/387 (49%), Gaps = 44/387 (11%)
 Frame = +2

Query: 2    LPSAEIQLXXXXXXXXXXXXXTLIVTPLMDFVRQNRAAKAGPRRLLSNGKLXXXXXXXXX 181
            LPSAEIQL              L+VTPLMDFVRQ RAAK G RR LSNGKL         
Sbjct: 132  LPSAEIQLERREAERGGAAKEALVVTPLMDFVRQKRAAKGGSRRSLSNGKLSRRAVGSST 191

Query: 182  XXXXXXXXXXXXXXXXXXTAMYVLRDSAKNSNGKDKSTYILVSKRDDQGFD-KPVSSTSA 358
                              +AMYVLRD+ KN +GKDKS ++LV KRDD+    K V+   A
Sbjct: 192  GNRGASSKRGSERRRIS-SAMYVLRDTVKNMSGKDKSMHLLVPKRDDERLSHKSVTVVPA 250

Query: 359  MASEVVKEESGVSANSNAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILGSHSLKQN 538
              +EV+ EESG+S  + +           EREI                N + S +LKQN
Sbjct: 251  ARTEVLAEESGISGTNESGKKKFLLLKGKEREIFHVSGSLSKGITSSVGNTISSAALKQN 310

Query: 539  QXXXXXXXXXXXXLLNKDARQSQA-----EQQMQNSNLEKDKRPPLPPHVQLVVKDTNGV 703
            Q            LLNKD+RQSQ+     EQQ+Q +NLEKDKRPP PPH QLV+KD    
Sbjct: 311  QQHQGSERIVKRILLNKDSRQSQSFVGLSEQQIQATNLEKDKRPPRPPHAQLVLKDPIPA 370

Query: 704  PDDKLIVNDLH---CEKQERRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXX 871
            PDDK+  N+ H    EKQE+R+RNKD+PDRGVWT LRR                      
Sbjct: 371  PDDKVAGNNSHGFCSEKQEKRSRNKDKPDRGVWTSLRRSDGSHTSDESLSSSISQLSQSP 430

Query: 872  XXXXEG---------------------------------SHRHIGRRGPIHGVKD-DSSS 949
                EG                                 SH+H GRRGP H VKD D SS
Sbjct: 431  VDSFEGSLGDTQVDMANARCGEVKNLGTGRTSHSSMDNGSHKHFGRRGPAHVVKDTDGSS 490

Query: 950  VSSEGKPLRRGSASGYGPHEKQVWVQK 1030
            +  EGK  R+G  +GY  HEKQVWVQK
Sbjct: 491  IVGEGKHSRKG--TGYVSHEKQVWVQK 515


>XP_015579218.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Ricinus
            communis]
          Length = 527

 Score =  236 bits (603), Expect = 2e-67
 Identities = 164/388 (42%), Positives = 194/388 (50%), Gaps = 45/388 (11%)
 Frame = +2

Query: 2    LPSAEIQLXXXXXXXXXXXXXTL-IVTPLMDFVRQNRAAKAGPRRLLSNGKLXXXXXXXX 178
            LPSAEIQL                IVTPLMDFVRQ RAAK G RR+LSNGK+        
Sbjct: 138  LPSAEIQLERREAERAASAAKDAPIVTPLMDFVRQKRAAKTGSRRILSNGKISRRSGASG 197

Query: 179  XXXXXXXXXXXXXXXXXXXTAMYVLRDSAKNSNGKDKSTYILVSKRDDQGF-DKPVSSTS 355
                                 MYVLRDSAK+++GKDKSTY+LV KRDDQ F DK     S
Sbjct: 198  SPSSSSSKRSSEKKRVS--ATMYVLRDSAKSTSGKDKSTYLLVPKRDDQQFSDKSTPFAS 255

Query: 356  AMASEVVKEESGVSANSNAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILGSHSLKQ 535
            A  +EV+++ESGVS  ++            E+EI                  + S ++KQ
Sbjct: 256  ASGTEVLEDESGVSGITDTGKKKILLLKGKEKEISALSGGMSKQNAASFDKNVTSSAIKQ 315

Query: 536  NQXXXXXXXXXXXXLLNKDARQSQA-----EQQMQNSNLEKDKRPPLPPHVQLVVKDTNG 700
            +Q            LLNKD+RQ+Q+     EQQ+Q+SNLEK+KR P P HVQLV+KD NG
Sbjct: 316  SQRRESSGRIIRSILLNKDSRQNQSSGFQSEQQIQSSNLEKEKRLPRPAHVQLVLKDVNG 375

Query: 701  VPDDKLIVNDLH---CEKQERRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXX 868
              DDK + NDLH    EKQE+RTRNKDRPDR VWT LRR                     
Sbjct: 376  SSDDKFVGNDLHGFSGEKQEKRTRNKDRPDRVVWTPLRRSDGSYASDESLSSSASQSTHT 435

Query: 869  XXXXXEG---------------------------------SHRHIGRRGPIHGVKDDSSS 949
                 +G                                 SH+H GRRGP H V+D   S
Sbjct: 436  GQDSSQGNLGDIKVDSSNSRSGDVKTLGSGRSSHSSLDNGSHKHFGRRGPSHTVRDADGS 495

Query: 950  VSSEGKPLRR-GSASGYGPHEKQVWVQK 1030
             S EGKP +R G ASGYG HEKQVWVQK
Sbjct: 496  -SLEGKPSKRGGGASGYGSHEKQVWVQK 522


>XP_015579219.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X2 [Ricinus
            communis]
          Length = 519

 Score =  235 bits (599), Expect = 8e-67
 Identities = 166/388 (42%), Positives = 196/388 (50%), Gaps = 45/388 (11%)
 Frame = +2

Query: 2    LPSAEIQLXXXXXXXXXXXXXTL-IVTPLMDFVRQNRAAKAGPRRLLSNGKLXXXXXXXX 178
            LPSAEIQL                IVTPLMDFVRQ RAAK G RR+LSNGK+        
Sbjct: 138  LPSAEIQLERREAERAASAAKDAPIVTPLMDFVRQKRAAKTGSRRILSNGKISRRSGASG 197

Query: 179  XXXXXXXXXXXXXXXXXXXTAMYVLRDSAKNSNGKDKSTYILVSKRDDQGF-DKPVSSTS 355
                                 MYVLRDSAK+++GKDKSTY+LV KRDDQ F DK     S
Sbjct: 198  SPSSSSSKRSSEKKRVS--ATMYVLRDSAKSTSGKDKSTYLLVPKRDDQQFSDKSTPFAS 255

Query: 356  AMASEVVKEESGVSANSNAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILGSHSLKQ 535
            A  +EV+++ESGVS  ++            E+EI               KN+  S ++KQ
Sbjct: 256  ASGTEVLEDESGVSGITDTGKKKILLLKGKEKEISANAASFD-------KNVTSS-AIKQ 307

Query: 536  NQXXXXXXXXXXXXLLNKDARQSQA-----EQQMQNSNLEKDKRPPLPPHVQLVVKDTNG 700
            +Q            LLNKD+RQ+Q+     EQQ+Q+SNLEK+KR P P HVQLV+KD NG
Sbjct: 308  SQRRESSGRIIRSILLNKDSRQNQSSGFQSEQQIQSSNLEKEKRLPRPAHVQLVLKDVNG 367

Query: 701  VPDDKLIVNDLH---CEKQERRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXX 868
              DDK + NDLH    EKQE+RTRNKDRPDR VWT LRR                     
Sbjct: 368  SSDDKFVGNDLHGFSGEKQEKRTRNKDRPDRVVWTPLRRSDGSYASDESLSSSASQSTHT 427

Query: 869  XXXXXEG---------------------------------SHRHIGRRGPIHGVKDDSSS 949
                 +G                                 SH+H GRRGP H V+D   S
Sbjct: 428  GQDSSQGNLGDIKVDSSNSRSGDVKTLGSGRSSHSSLDNGSHKHFGRRGPSHTVRDADGS 487

Query: 950  VSSEGKPLRR-GSASGYGPHEKQVWVQK 1030
             S EGKP +R G ASGYG HEKQVWVQK
Sbjct: 488  -SLEGKPSKRGGGASGYGSHEKQVWVQK 514


>OMO92296.1 Regulator of nonsense-mediated decay, UPF3 [Corchorus olitorius]
          Length = 493

 Score =  234 bits (596), Expect = 1e-66
 Identities = 163/370 (44%), Positives = 186/370 (50%), Gaps = 27/370 (7%)
 Frame = +2

Query: 2    LPSAEIQLXXXXXXXXXXXXXTLIVTPLMDFVRQNRAAKAGPRRLLSNGKLXXXXXXXXX 181
            LPSAEIQL               IVTPLMDFVRQ RAAK G RR LSNGKL         
Sbjct: 132  LPSAEIQLERKEAERAGVPKDAPIVTPLMDFVRQKRAAKGGSRRSLSNGKLSRRAGGSSG 191

Query: 182  XXXXXXXXXXXXXXXXXXTAMYVLRDSAKNSNGKDKSTYILVSKRDDQGF-DKPVSSTSA 358
                              T MYVLRDS KN++GKDKS YILVS++D+Q   DKPV +   
Sbjct: 192  ISPSSGSSKRGSEKRRGSTTMYVLRDSLKNASGKDKSAYILVSRKDEQQLSDKPVGT--- 248

Query: 359  MASEVVKEESGVSANSNAXXXXXXXXXXXEREIXXXXXXXXXXXXXXX--KNILGSHSLK 532
               EV +E+SGVS  ++A           E++I                 KNIL S   K
Sbjct: 249  ---EVSEEQSGVSGITDAGKKKVLLLKGKEKDISHVAGSMLHQQNVTSPIKNILSSTPTK 305

Query: 533  QNQXXXXXXXXXXXXLLNKDARQSQ-----AEQQMQNSNLEKDKRPPLPPHVQLVVKDTN 697
            QN             LLNKDARQSQ     +EQQ+Q SNLEKD+RPP   H Q V++D N
Sbjct: 306  QN--FRREGRMIRGILLNKDARQSQLSGVQSEQQIQASNLEKDRRPPRHSHAQFVLRDAN 363

Query: 698  GVPDDKLIVNDLH-CEKQERRTRNKDRPDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXX 874
            G  DDK   ND H  EK ERR RNKDRPDRGVWTLRR                       
Sbjct: 364  GASDDKGGGNDFHGIEKLERRGRNKDRPDRGVWTLRRSDGSHASDESLSSASSQSAQIPL 423

Query: 875  XXXEGS------------------HRHIGRRGPIHGVKDDSSSVSSEGKPLRRGSASGYG 1000
               EGS                  H+H+GRRG +     D SSV  +GKP +RGSA+GYG
Sbjct: 424  DSSEGSVQVKSVGGGRNNSLDNGFHKHVGRRGAV----ADGSSV-GDGKPGKRGSATGYG 478

Query: 1001 PHEKQVWVQK 1030
             HEKQVWVQK
Sbjct: 479  SHEKQVWVQK 488


>XP_007221815.1 hypothetical protein PRUPE_ppa004923mg [Prunus persica] ONI36326.1
            hypothetical protein PRUPE_1G581100 [Prunus persica]
          Length = 482

 Score =  233 bits (595), Expect = 1e-66
 Identities = 152/351 (43%), Positives = 181/351 (51%), Gaps = 10/351 (2%)
 Frame = +2

Query: 2    LPSAEIQLXXXXXXXXXXXXXTLIVTPLMDFVRQNRAAKAGPRRLLSNGKLXXXXXXXXX 181
            LPSAEIQL               IVTPLMDFVRQ RA+KAG RR L+NGK          
Sbjct: 133  LPSAEIQLERREAERSGAGKDAPIVTPLMDFVRQKRASKAGSRRSLTNGKTSRRAGGPSS 192

Query: 182  XXXXXXXXXXXXXXXXXXTAMYVLRDSAKNSNGKDKSTYILVSKRDD-QGFDKPVSSTSA 358
                                MYVLRD+ KN++ KDKSTYILV KRDD Q  +K V+  SA
Sbjct: 193  RSPSLATSKRGSERKRNSATMYVLRDARKNTSAKDKSTYILVPKRDDQQPSEKSVTLASA 252

Query: 359  MASEVVKEESGVSANSNAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILGSHSLKQN 538
              + V++EESGVS  ++A           EREI               KN+ G+ +LKQN
Sbjct: 253  AGTHVLEEESGVS-GADAVKKKILLLKGKEREITHVPANMSQQQSSSAKNMGGTIALKQN 311

Query: 539  QXXXXXXXXXXXXLLNKDARQSQAE-----QQMQNSNLEKDKRPPLPPHVQLVVKDTNGV 703
                         LLNKDARQSQ+      QQ+Q SN ++DKRPP   HVQL++KDTNG 
Sbjct: 312  LRRQENGRIIRGILLNKDARQSQSSGIYSAQQIQTSNSDRDKRPPRSQHVQLILKDTNGA 371

Query: 704  PDDKLIVNDLH---CEKQERRTRNKDRPDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXX 874
            PD  ++ NDLH    EKQE+R RNK+RPDR VWT                          
Sbjct: 372  PDYNIVGNDLHGICSEKQEKRIRNKERPDRVVWTPLNRLDGSSASDESLSSAFQPAHSLL 431

Query: 875  XXXEGSHRHIGRRGPIHGVKD-DSSSVSSEGKPLRRGSASGYGPHEKQVWV 1024
               EG H+H GRRG  HGVKD D S V+ EGK  +R    GYG HE  VW+
Sbjct: 432  DSSEGCHKHHGRRGTTHGVKDLDGSPVAGEGKHSKR----GYGSHECDVWL 478